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Gene TMEM87ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
392 supporting clones for gene TMEM87A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC356004   .a 1 to 550 1 to 550   tiling clone,   550/550
(100 %)
0 diff
(100 %id)
BI562084 testis .a 105 to 887 1 to 779       779/781
(99 %)
22 diff
(97.2 %id)
DC341748 thalamus .a 107 to 707 1 to 601       601/601
(100 %)
2 diff
(99.7 %id)
NM_015497.3   .a 107 to 3111 1 to 3005 exact RefSeq, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 3005/3005
(100 %)
0 diff
(100 %id)
DC337113 substantia nigra .a 110 to 680 1 to 571       571/571
(100 %)
0 diff
(100 %id)
TI_44351133   .a 110 to 887 130 to 903       774/905
(85 %)
23 diff
(97.5 %id)
DC414657 trachea .a 118 to 691 1 to 576       576/576
(100 %)
2 diff
(99.7 %id)
DC411346 kidney, tumor tissue .a 193 to 783 1 to 592       592/592
(100 %)
1 diff
(99.9 %id)
DC424099 whole embryo, mainly body .a 195 to 1006 1 to 813       813/813
(100 %)
11 diff
(98.7 %id)
DC359478   .a 195 to 919 1 to 725     Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 725/725
(100 %)
1 diff
(99.9 %id)
DC374778 brain .a 199 to 770 1 to 572       572/572
(100 %)
3 diff
(99.5 %id)
DC352421 brain .a 201 to 748 1 to 548       548/548
(100 %)
2 diff
(99.7 %id)
DB464410.
matches multiple genes
hippocampus .a 201 to 623 1 to 423     also hits gene zopor 423/424
(99 %)
6 diff
(98.6 %id)
DC354157 brain .a 202 to 778 1 to 577       577/577
(100 %)
2 diff
(99.7 %id)
DC379406 pericardium .a 202 to 720 1 to 520       520/520
(100 %)
1 diff
(99.9 %id)
DC326908 caudate nucleus .a 203 to 725 1 to 523       523/527
(99 %)
3 diff
(99.5 %id)
DC327566 caudate nucleus .a 203 to 843 1 to 642       642/642
(100 %)
1 diff
(99.9 %id)
DC353724 brain .a 203 to 804 1 to 602       602/602
(100 %)
1 diff
(99.9 %id)
DC355987   .a 203 to 756 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DC319710 brain .a 204 to 787 1 to 584       584/584
(100 %)
0 diff
(100 %id)
DC353621 brain .a 204 to 800 1 to 597       597/597
(100 %)
0 diff
(100 %id)
DC378228   .a 204 to 742 1 to 540       540/563
(95 %)
3 diff
(99.5 %id)
CD703253 normal nasopharynx .a 208 to 530 23 to 345       323/345
(93 %)
6 diff
(98.3 %id)
DC386401   .a 209 to 766 1 to 558       558/558
(100 %)
4 diff
(99.3 %id)
CD705009 normal nasopharynx .a 210 to 725 21 to 536       516/536
(96 %)
11 diff
(98.0 %id)
DC378917 pericardium .a 213 to 758 1 to 546       546/546
(100 %)
1 diff
(99.9 %id)
DC301784   .a 214 to 795 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
DC354808   .a 214 to 774 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC363160   .a 214 to 747 1 to 535       535/535
(100 %)
1 diff
(99.9 %id)
DC366181   .a 214 to 643 1 to 430       430/430
(100 %)
2 diff
(99.6 %id)
DC373858 tongue .a 214 to 789 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC397106 testis .a 214 to 526 1 to 313       313/313
(100 %)
1 diff
(99.7 %id)
DC401771 testis .a 214 to 748 1 to 536       536/536
(100 %)
1 diff
(99.9 %id)
DC406483 thymus .a 214 to 769 1 to 556       556/556
(100 %)
0 diff
(100 %id)
CN260587 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 215 to 718 1 to 504       504/504
(100 %)
0 diff
(100 %id)
BG484315 lung .a 215 to 912 1 to 699       699/775
(90 %)
25 diff
(96.8 %id)
BG534133 lung .a 215 to 865 1 to 641       641/641
(100 %)
12 diff
(98.2 %id)
DC304172 cerebellum .a 216 to 783 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC364164   .a 216 to 791 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
DC365638   .a 216 to 709 1 to 494       494/494
(100 %)
0 diff
(100 %id)
DC315910 amygdala .a 217 to 780 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC371393   .a 219 to 786 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DB442821.
matches multiple genes
testis .a 221 to 673 1 to 454     also hits gene zopor 454/454
(100 %)
3 diff
(99.4 %id)
DC370793   .a 221 to 769 1 to 549       549/549
(100 %)
1 diff
(99.9 %id)
DC384425   .a 222 to 765 1 to 544       544/544
(100 %)
1 diff
(99.9 %id)
DC313099 amygdala .a 223 to 766 1 to 545       545/555
(98 %)
2 diff
(99.7 %id)
DB449109 testis .a 223 to 656 1 to 434       434/434
(100 %)
4 diff
(99.1 %id)
DC362263 Kidney .a 223 to 806 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
DC371671   .a 223 to 801 1 to 576       576/576
(100 %)
1 diff
(99.9 %id)
AF132733   .a 224 to 2484 1 to 2261 K117N Y118I I313S AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 2261/2261
(100 %)
3 diff
(99.9 %id)
DB473122.
matches multiple genes
hippocampus .a 226 to 694 1 to 469     also hits gene zopor 469/469
(100 %)
0 diff
(100 %id)
DB167554 kidney, tumor tissue .a 228 to 669 2 to 444   capped   443/443
(100 %)
5 diff
(98.9 %id)
DA300367 hippocampus .a 230 to 789 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA682939   .a 230 to 727 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
DA883145   .a 230 to 798 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA999408 breast, tumor tissue .a 230 to 767 2 to 539   capped   538/538
(100 %)
3 diff
(99.5 %id)
AK074870   .a 231 to 3105 1 to 2875 exact tiling clone, available from FLJ,   2875/2875
(100 %)
3 diff
(99.9 %id)
AK289591 alzheimer cortex .a 231 to 2153 1 to 1923 S193P     1923/1923
(100 %)
2 diff
(99.9 %id)
DA552277   .a 231 to 760 20 to 549   capped   530/530
(100 %)
0 diff
(100 %id)
BJ989887 hepatoblastoma .a 231 to 822 9 to 600       592/600
(98 %)
7 diff
(98.9 %id)
BJ995880 hepatoblastoma .a 231 to 758 1 to 528       528/528
(100 %)
0 diff
(100 %id)
BP305574   .a 231 to 836 1 to 606       606/607
(99 %)
1 diff
(99.9 %id)
DC381742 placenta .a 231 to 775 1 to 545       545/545
(100 %)
0 diff
(100 %id)
BP326099 prostata .a 231 to 810 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BP326931 prostata .a 231 to 811 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA017377 adrenal gland .a 232 to 809 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA024079   .a 232 to 791 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA028648   .a 232 to 800 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA078563 cerebellum .a 232 to 796 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA131867 alzheimer cortex .a 232 to 769 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA145415 amygdala .a 232 to 807 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA167223 amygdala .a 232 to 703 2 to 474   capped   471/473
(99 %)
2 diff
(99.6 %id)
DA175850 amygdala .a 232 to 787 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA199238 brain .a 232 to 785 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA204733 brain .a 232 to 811 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA257597 caudate nucleus .a 232 to 798 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA262682 caudate nucleus .a 232 to 782 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA273668 corpus callosum .a 232 to 789 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA276548 corpus callosum .a 232 to 800 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA278875 corpus callosum .a 232 to 782 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA284157 corpus callosum .a 232 to 801 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA304007 hippocampus .a 232 to 800 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA346434 substantia nigra .a 232 to 795 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA359758 subthalamic nucleus .a 232 to 774 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA373652 thalamus .a 232 to 775 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA373969 thalamus .a 232 to 796 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA423816   .a 232 to 795 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA439861 tongue, tumor tissue .a 232 to 810 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA473648   .a 232 to 793 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA533178 brain .a 232 to 798 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA547654   .a 232 to 720 2 to 492   capped   491/491
(100 %)
2 diff
(99.6 %id)
DA550748   .a 232 to 789 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA584465 lung .a 232 to 809 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA596407   .a 232 to 709 2 to 479   capped   478/478
(100 %)
1 diff
(99.8 %id)
DA625098 Kidney .a 232 to 779 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA627891 Kidney .a 232 to 764 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DA661258   .a 232 to 787 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA700577   .a 232 to 729 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
DA711558   .a 232 to 815 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA714561   .a 232 to 793 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA717427   .a 232 to 777 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA766446 tongue .a 232 to 796 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA767027 tongue .a 232 to 798 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA814191   .a 232 to 700 2 to 470   capped   469/469
(100 %)
0 diff
(100 %id)
DA846367 placenta .a 232 to 789 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA890307 rectum .a 232 to 797 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA953446 Spleen .a 232 to 785 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB005381 breast, tumor tissue .a 232 to 796 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB005435 breast, tumor tissue .a 232 to 781 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB006664 cervix, tumor tissue .a 232 to 794 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB013018 esophageal, tumor tissue .a 232 to 809 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB039837 testis .a 232 to 803 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB072753 testis .a 232 to 758 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
DB076162 testis .a 232 to 779 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DB105798 thymus .a 232 to 778 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB127721 thymus .a 232 to 771 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DB201883 trachea .a 232 to 807 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB209195 trachea .a 232 to 793 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB266535 uterus .a 232 to 820 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DB271814 uterus .a 232 to 793 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA147566 amygdala .a 233 to 811 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA552176   .a 233 to 755 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
DA553893   .a 233 to 787 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA656844   .a 233 to 805 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA691154   .a 233 to 795 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA871830 Prostate .a 233 to 774 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA941969 Spleen .a 233 to 821 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DB003678 breast, tumor tissue .a 233 to 802 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB091097 testis .a 233 to 814 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB095287 testis .a 233 to 791 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB197817 trachea .a 233 to 817 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DB205469 trachea .a 233 to 802 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB269534 uterus .a 233 to 802 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BP267989 thyroid .a 234 to 806 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DA879831 Prostate .a 234 to 800 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB016174 esophageal, tumor tissue .a 234 to 803 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB257592 uterus .a 234 to 816 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
TI_45211658   .a 236 to 975 90 to 828       737/829
(88 %)
14 diff
(98.4 %id)
TI_44344698   .a 236 to 1038 94 to 894       801/895
(89 %)
15 diff
(98.4 %id)
BM839192 Ascites, stomach .a 236 to 708 1 to 473       473/473
(100 %)
0 diff
(100 %id)
DA024191   .a 237 to 793 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA079128 cerebellum .a 237 to 817 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA089736 cerebellum .a 237 to 814 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA145701 amygdala .a 237 to 814 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA271980 caudate nucleus .a 237 to 861 2 to 626   capped   625/625
(100 %)
0 diff
(100 %id)
DA289884 hippocampus .a 237 to 806 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA303949 hippocampus .a 237 to 804 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA579345   .a 237 to 783 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA583335 lung .a 237 to 772 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA627210 Kidney .a 237 to 786 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
DA649730   .a 237 to 790 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB048055 testis .a 237 to 787 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB265396 uterus .a 237 to 799 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA009861 adrenal gland .a 238 to 814 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA162364 amygdala .a 238 to 809 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA205884 brain .a 238 to 807 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA210519 brain .a 238 to 803 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB486865.
matches multiple genes
hypothalamus .a 238 to 680 1 to 443     also hits gene zopor 443/443
(100 %)
0 diff
(100 %id)
DA555091   .a 238 to 804 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA558089   .a 238 to 817 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BP326752 prostata .a 238 to 825 1 to 588       588/588
(100 %)
0 diff
(100 %id)
DA932456 Spleen .a 238 to 807 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB003921 breast, tumor tissue .a 238 to 786 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DB021613 testis .a 238 to 800 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB033164 testis .a 238 to 820 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA451950 tongue, tumor tissue .a 239 to 729 2 to 492   capped   491/491
(100 %)
0 diff
(100 %id)
DB001350 breast, tumor tissue .a 239 to 779 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB013551 esophageal, tumor tissue .a 239 to 723 2 to 486   capped   485/485
(100 %)
2 diff
(99.6 %id)
DB076846 testis .a 239 to 781 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DB256727 uterus .a 239 to 810 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA479642   .a 241 to 797 8 to 564   capped   557/557
(100 %)
0 diff
(100 %id)
DA660572   .a 241 to 799 11 to 569   capped   559/559
(100 %)
0 diff
(100 %id)
DB463082.
matches multiple genes
hippocampus .a 242 to 673 1 to 432     also hits gene zopor 432/432
(100 %)
3 diff
(99.4 %id)
AK075403   .a 245 to 2484 52 to 2291 L518S     2240/2291
(97 %)
7 diff
(99.7 %id)
AK290150 thalamus .a 245 to 2033 1 to 1789 L161P     1789/1789
(100 %)
2 diff
(99.9 %id)
DC341779 thalamus .a 245 to 817 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
ES307810 beard hair, skin .a 245 to 470 1 to 225       225/227
(99 %)
1 diff
(99.6 %id)
DA303677 hippocampus .a 246 to 793 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA347475 substantia nigra .a 246 to 815 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
CD700495 normal nasopharynx .a 246 to 716 23 to 493       471/493
(95 %)
6 diff
(98.8 %id)
CN260588 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 246 to 939 1 to 695       695/695
(100 %)
1 diff
(99.9 %id)
DA634419 Kidney .a 246 to 814 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA636576 Kidney .a 246 to 834 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA648336   .a 246 to 803 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA747689   .a 246 to 802 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB258249 uterus .a 246 to 811 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
CN260592 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 249 to 921 1 to 674       674/674
(100 %)
2 diff
(99.8 %id)
DA027923   .a 250 to 795 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA299199 hippocampus .a 250 to 810 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA397620 thalamus .a 250 to 829 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA534166 brain .a 250 to 836 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA698858   .a 250 to 790 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA699940   .a 250 to 769 2 to 520   capped   519/519
(100 %)
0 diff
(100 %id)
DA878703 Prostate .a 250 to 833 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
BX377077 Placenta Cot 25-normalized .a 251 to 1309 1 to 1052       1052/1052
(100 %)
10 diff
(99.1 %id)
TI_57242588   .a 253 to 1019 70 to 849       780/965
(80 %)
21 diff
(97.9 %id)
DB451306.
matches multiple genes
testis .a 256 to 734 1 to 479     also hits gene zopor 479/479
(100 %)
0 diff
(100 %id)
DA210911 brain .a 261 to 824 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA840209 placenta .a 261 to 810 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB274939 uterus .a 261 to 810 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
CN260593 embryonic stem cells, DMSO-treated H9 cellline .a 265 to 836 1 to 572       572/572
(100 %)
0 diff
(100 %id)
BE296569 muscle, rhabdomyosarcoma .a 269 to 830 1 to 562       562/562
(100 %)
0 diff
(100 %id)
BQ308078 breast .a 287 to 846 560 to 7       554/560
(98 %)
3 diff
(99.5 %id)
FN057359 breast carcinoma .a 359 to 477 1 to 119       119/119
(100 %)
0 diff
(100 %id)
BG762258 melanotic melanoma, high MDR (cell line), skin .a 410 to 1234 1 to 826       826/829
(99 %)
6 diff
(99.3 %id)
BE206754 lung, small cell carcinoma .a 440 to 1087 1 to 646       646/646
(100 %)
6 diff
(99.1 %id)
DA771876 brain .a 467 to 1026 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BE179358 head_neck .a 478 to 729 250 to 2     Submitted on the opposite strand 249/250
(99 %)
2 diff
(99.2 %id)
BQ350646 head_neck .a 478 to 611 148 to 12       137/148
(92 %)
2 diff
(98.7 %id)
BE179315 head_neck .a 595 to 1229 634 to 1     Submitted on the opposite strand 634/637
(99 %)
11 diff
(98.3 %id)
BF793113 adrenal cortex carcinoma, cell line, adrenal gland .a 595 to 1329 1 to 736       736/897
(82 %)
6 diff
(99.4 %id)
AU280715   .a 633 to 1203 1 to 571       571/571
(100 %)
0 diff
(100 %id)
BP355998   .a 653 to 1235 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA681931 ovary .a 823 to 1382 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
CR596160 Placenta Cot 25-normalized .a 979 to 2456 1 to 1478       1478/1478
(100 %)
0 diff
(100 %id)
BG120180 adenocarcinoma, cell line, Liver .a 1023 to 1745 1 to 718       718/926
(77 %)
21 diff
(97.8 %id)
DA828918 placenta .a 1049 to 1756 2 to 717   capped   714/805
(88 %)
11 diff
(98.7 %id)
DA259804 caudate nucleus .a 1089 to 1662 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BP338133 Spleen .a 1105 to 1688 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BF331855 breast .a 1139 to 1802 678 to 18       661/680
(97 %)
10 diff
(98.6 %id)
CK001907 brain/CNS, Bulk tissue from Human Spinal cord .a 1145 to 1754 1 to 610       610/617
(98 %)
11 diff
(98.3 %id)
FN048550 breast carcinoma .a 1155 to 1220 1 to 66       66/67
(98 %)
1 diff
(98.6 %id)
DA558769   .a 1166 to 1717 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
AW996173 breast_normal .a 1226 to 1623 398 to 1     Submitted on the opposite strand 398/398
(100 %)
0 diff
(100 %id)
BE179352 head_neck .a 1249 to 1421 1 to 170       170/170
(100 %)
10 diff
(94.2 %id)
BG119576 adenocarcinoma, cell line, Liver .a 1254 to 1892 1 to 640       640/940
(68 %)
2 diff
(99.8 %id)
F11691 brain, total brain .a 1313 to 1653 1 to 341       341/341
(100 %)
0 diff
(100 %id)
CN260591 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1335 to 1763 1 to 429       429/429
(100 %)
0 diff
(100 %id)
CX871686 embryonic stem .a 1358 to 2209 1 to 852       852/852
(100 %)
0 diff
(100 %id)
TI_57218178   .a 1374 to 2192 28 to 855       828/954
(86 %)
28 diff
(97.1 %id)
FN061825 breast carcinoma .a 1376 to 1437 1 to 62       62/63
(98 %)
1 diff
(98.5 %id)
CF272363 Brain glioblastoma .a 1407 to 2356 1 to 957       957/964
(99 %)
14 diff
(98.6 %id)
CB134628 Liver .a 1433 to 2026 1 to 594       594/594
(100 %)
0 diff
(100 %id)
BM822999 stomach .a 1535 to 2018 1 to 484       484/484
(100 %)
0 diff
(100 %id)
BM829848 stomach .a 1535 to 2230 1 to 696       696/696
(100 %)
0 diff
(100 %id)
BM830189 stomach .a 1535 to 2256 1 to 722       722/722
(100 %)
0 diff
(100 %id)
CD244881 White Matter .a 1536 to 2267 8 to 755       748/956
(78 %)
26 diff
(97.3 %id)
AL049944 brain .a 1540 to 3092 7 to 1557   available from DKFZ, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1551/1551
(100 %)
5 diff
(99.7 %id)
BQ878921 dorsal root ganglia .a 1570 to 2390 1 to 830       830/872
(95 %)
13 diff
(98.6 %id)
AU184962 skin .a 1579 to 1781 203 to 1       203/203
(100 %)
1 diff
(99.6 %id)
BQ212452 melanotic melanoma, skin .a 1659 to 2484 1 to 831   AAA   831/836
(99 %)
12 diff
(98.6 %id)
BJ995881 hepatoblastoma .a 1791 to 2244 454 to 1       454/454
(100 %)
0 diff
(100 %id)
CD558726 White Matter .a 1798 to 2661 17 to 889       876/893
(98 %)
23 diff
(97.5 %id)
TI_149301838   .a 1805 to 2489 763 to 84   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 680/886
(76 %)
6 diff
(99.4 %id)
BM980131 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1805 to 2502 693 to 1       693/745
(93 %)
6 diff
(99.2 %id)
TI_154163083   .a 1813 to 2526 81 to 797       717/717
(100 %)
16 diff
(97.8 %id)
EL949382 eyeball .a 1829 to 2281 6 to 457   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 452/457
(98 %)
6 diff
(98.7 %id)
FN062526 breast carcinoma .a 1841 to 1941 1 to 98       98/98
(100 %)
2 diff
(98.0 %id)
FN066262 breast carcinoma .a 1852 to 1925 3 to 77       75/77
(97 %)
1 diff
(98.8 %id)
BQ003043 Chondrosarcoma, Left Pelvis .a 1852 to 2484 651 to 19   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 633/633
(100 %)
0 diff
(100 %id)
FN061739 breast carcinoma .a 1856 to 1956 101 to 1     Submitted on the opposite strand 101/101
(100 %)
0 diff
(100 %id)
DC427029 whole embryo, mainly body .a 1940 to 2484 546 to 1       546/550
(99 %)
3 diff
(99.5 %id)
BX377076 Placenta Cot 25-normalized .a 2011 to 3092 1076 to 1   tiling clone,   1076/1158
(92 %)
13 diff
(98.9 %id)
DC426139   .a 2049 to 2484 462 to 26   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 437/442
(98 %)
3 diff
(99.4 %id)
AW731897 lung, small cell carcinoma .a 2075 to 2489 419 to 6       414/419
(98 %)
0 diff
(100 %id)
F09351 brain, total brain .a 2184 to 2484 301 to 1       301/301
(100 %)
0 diff
(100 %id)
BJ989888 hepatoblastoma .a 2577 to 3056 480 to 1       480/480
(100 %)
0 diff
(100 %id)
DB373542 placenta .a 2633 to 3105 475 to 4       472/481
(98 %)
0 diff
(100 %id)
DC357421   .b 1 to 547 6 to 552   tiling clone,   552/552
(100 %)
0 diff
(100 %id)
DC367569   .b 3 to 555 1 to 553       553/553
(100 %)
3 diff
(99.5 %id)
DC301648   .b 4 to 604 1 to 601       601/601
(100 %)
0 diff
(100 %id)
DC360755   .b 4 to 561 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
DC361165   .b 4 to 585 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DC414815 trachea .b 4 to 547 1 to 544       544/544
(100 %)
1 diff
(99.9 %id)
AK290484 brain .b 9 to 1993 1 to 1985 D105G     1985/1985
(100 %)
2 diff
(99.9 %id)
BG482456 choriocarcinoma, placenta .b 9 to 699 1 to 692       692/693
(99 %)
5 diff
(99.3 %id)
BC069240 Placenta, choriocarcinoma .b 10 to 2196 1 to 2187 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 2187/2187
(100 %)
0 diff
(100 %id)
DA498712 brain .b 10 to 594 2 to 586   capped   585/585
(100 %)
2 diff
(99.7 %id)
BE871691 adenocarcinoma, colon .b 31 to 666 1 to 631       631/915
(68 %)
31 diff
(96.7 %id)
TI_1948234758   .b 155 to 1008 121 to 975   fully sequenced,   855/975
(87 %)
7 diff
(99.3 %id)
TI_1948234925   .b 155 to 976 132 to 953   fully sequenced,   822/953
(86 %)
8 diff
(99.2 %id)
TI_1948235090   .b 155 to 976 123 to 944   fully sequenced,   822/944
(87 %)
10 diff
(99.0 %id)
TI_1948235263   .b 155 to 911 131 to 887   fully sequenced,   757/887
(85 %)
6 diff
(99.4 %id)
EL736562 mixed .b 161 to 795 1 to 634       634/637
(99 %)
2 diff
(99.7 %id)
TI_1948235264   .b 881 to 1649 891 to 123   fully sequenced,   769/891
(86 %)
0 diff
(100 %id)
TI_1948234926   .b 915 to 1649 856 to 123   fully sequenced,   734/856
(85 %)
0 diff
(100 %id)
TI_1948235091   .b 915 to 1649 856 to 122   fully sequenced,   735/856
(85 %)
0 diff
(100 %id)
TI_1948234759   .b 978 to 1649 794 to 122   fully sequenced,   673/794
(84 %)
0 diff
(100 %id)
AK309915 placenta .c 1 to 1430 1 to 1430 R351I tiling clone,   1430/1430
(100 %)
1 diff
(100.0 %id)
DB445002.
matches multiple genes
testis .d 1 to 425 1 to 425   tiling clone, also hits gene zopor 425/425
(100 %)
1 diff
(99.8 %id)
DB447199 testis .d 51 to 476 1 to 427       427/427
(100 %)
1 diff
(99.8 %id)
AK297816   .d 117 to 2189 1 to 2073 exact tiling clone,   2073/2073
(100 %)
3 diff
(99.9 %id)
DC356384   .d 117 to 668 1 to 552       552/552
(100 %)
2 diff
(99.7 %id)
BG574254 breast, mammary adenocarcinoma, cell line .d 144 to 952 1 to 806   tiling clone,   806/807
(99 %)
14 diff
(98.3 %id)
AK309954 placenta .e 1 to 1371 1 to 1371 exact tiling clone,   1371/1371
(100 %)
2 diff
(99.9 %id)
DC382632 placenta .e 1 to 606 1 to 606       606/606
(100 %)
2 diff
(99.7 %id)
BY795420 eye .f 112 to 900 129 to 917 exact tiling clone,   913/917
(99 %)
5 diff
(99.5 %id)
BG105329 adrenal cortex carcinoma, cell line, adrenal gland .g 1 to 759 5 to 756 C89V Y90T N91M E92K I93S ... tiling clone,   756/863
(87 %)
15 diff
(98.3 %id)
NM_001110503.1   .h 1 to 1716 1 to 1716 exact RefSeq,   1716/1716
(100 %)
0 diff
(100 %id)
BM927105 brain .h 110 to 926 1 to 828 exact tiling clone,   828/1092
(75 %)
17 diff
(98.5 %id)
BC005335 Bladder, carcinoma .h 122 to 1716 1 to 1595 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 1595/1596
(99 %)
4 diff
(99.8 %id)
BP339357 Spleen .h 127 to 694 1 to 569       569/569
(100 %)
3 diff
(99.5 %id)
DA130052 alzheimer cortex .h 131 to 758 2 to 629 F96S capped   628/628
(100 %)
1 diff
(99.9 %id)
BF028771 bladder, carcinoma, cell line .h 141 to 846 1 to 690 F55L G56E K57R I58S L59S ... available from MGC,   690/911
(75 %)
29 diff
(96.9 %id)
CX756279 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .h 141 to 864 1 to 724 exact   Submitted on the opposite strand 724/729
(99 %)
1 diff
(99.9 %id)
TI_1948071869   .h 154 to 395 130 to 371   fully sequenced,   242/264
(91 %)
6 diff
(97.8 %id)
TI_1948072028   .h 154 to 395 132 to 373   fully sequenced,   242/264
(91 %)
6 diff
(97.8 %id)
TI_1948072193   .h 154 to 395 128 to 369   fully sequenced,   242/264
(91 %)
6 diff
(97.8 %id)
TI_1948072361   .h 154 to 395 122 to 363   fully sequenced, AAA   242/263
(92 %)
6 diff
(97.8 %id)
BE565037 bladder, carcinoma, cell line .h 157 to 760 1 to 602 A4V A5R W6G L7F Q8R ...     602/603
(99 %)
27 diff
(95.6 %id)
CV030022 mixed .h 160 to 713 1 to 554 G149*     554/665
(83 %)
6 diff
(99.1 %id)
BE566996 bladder, carcinoma, cell line .h 163 to 848 1 to 684       682/695
(98 %)
17 diff
(97.6 %id)
BM311040 Pancreas, Purified pancreatic islet .h 170 to 680 1 to 511       511/511
(100 %)
0 diff
(100 %id)
CK821593 Pancreas, Purified pancreatic islet .h 176 to 767 1 to 592     Submitted on the opposite strand 592/592
(100 %)
0 diff
(100 %id)
TI_1948071870   .h 334 to 713 497 to 118   fully sequenced,   380/398
(95 %)
0 diff
(100 %id)
TI_1948072029   .h 334 to 713 498 to 119   fully sequenced,   380/398
(95 %)
0 diff
(100 %id)
TI_1948072194   .h 334 to 713 499 to 120   fully sequenced,   380/398
(95 %)
0 diff
(100 %id)
TI_1948072362   .h 334 to 713 495 to 116   fully sequenced,   380/398
(95 %)
0 diff
(100 %id)
BQ225871 melanotic melanoma, skin .h 414 to 1287 1 to 884       884/885
(99 %)
19 diff
(97.9 %id)
BU616451 Bone, Subchondral Bone .h 486 to 1208 739 to 19   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 721/721
(100 %)
4 diff
(99.5 %id)
BI261182 cervical carcinoma cell line, cervix .h 961 to 1414 143 to 589       447/589
(75 %)
6 diff
(99.0 %id)
BM311627 Pancreas, Purified pancreatic islet .h 1107 to 1711 612 to 9   tiling clone,   604/612
(98 %)
0 diff
(100 %id)
CK821594 Pancreas, Purified pancreatic islet .h 1133 to 1710 595 to 19   AAA Submitted on the opposite strand 577/577
(100 %)
3 diff
(99.5 %id)
CA312976 Human Lung Epithelial cells, lung .h 1138 to 1795 675 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 657/775
(84 %)
5 diff
(99.4 %id)
AK023569 placenta .h 1628 to 3702 1 to 2075   tiling clone, available from FLJ,   2075/2075
(100 %)
4 diff
(99.9 %id)
AU136796 placenta .h 1629 to 2345 2 to 725   capped   724/724
(100 %)
12 diff
(98.4 %id)
AA486697 lung .h 2052 to 2505 1 to 454       454/454
(100 %)
2 diff
(99.6 %id)
AW997866 breast_normal .h 2164 to 2618 466 to 16     Submitted on the opposite strand 451/466
(96 %)
0 diff
(100 %id)
AA678001 liver and spleen .h 2368 to 2755 387 to 1       387/387
(100 %)
5 diff
(98.8 %id)
N63753 liver and spleen .h 2421 to 2761 345 to 2       344/450
(76 %)
0 diff
(100 %id)
R92776 liver and spleen .h 2431 to 2745 317 to 1       317/372
(85 %)
5 diff
(98.7 %id)
AW274979 pooled germ cell tumors .h 2536 to 2766 231 to 1       231/231
(100 %)
6 diff
(97.5 %id)
AU156869 placenta .h 3154 to 3702 551 to 1       551/566
(97 %)
17 diff
(97.0 %id)
AA372730 colon .h 3450 to 3655 1 to 206       206/206
(100 %)
2 diff
(99.1 %id)
BG399893 Kidney .i 1 to 678 4 to 685   tiling clone,   685/847
(80 %)
20 diff
(97.7 %id)
DA593526 lung .i 566 to 1147 2 to 583 exact tiling clone, capped   582/582
(100 %)
2 diff
(99.7 %id)
DA665249   .j 1 to 468 8 to 475 A5S tiling clone, capped   474/474
(100 %)
2 diff
(99.6 %id)
W74169 heart .k 1 to 340 1 to 344 E54D L55S W56S V57G D58R ... tiling clone, fully sequenced,   344/344
(100 %)
5 diff
(98.6 %id)
AI636314 adenocarcinoma, Pancreas .k 143 to 734 590 to 1       590/590
(100 %)
7 diff
(98.9 %id)
AW772375 Kidney .k 153 to 734 582 to 1   tiling clone,   582/582
(100 %)
3 diff
(99.5 %id)
AA555289 Schwannoma tumor .k 291 to 734 444 to 1       444/444
(100 %)
1 diff
(99.8 %id)
W76540 heart .k 310 to 735 428 to 1   tiling clone, fully sequenced,   428/428
(100 %)
3 diff
(99.3 %id)
DA582548 lung .l 1 to 548 2 to 549 exact tiling clone, capped   548/548
(100 %)
0 diff
(100 %id)
CN260586 embryonic stem cells, DMSO-treated H9 cellline .m 1 to 601 1 to 601 V65G S88A tiling clone,   601/601
(100 %)
6 diff
(99.1 %id)
CA445049 lung, Metastatic Chondrosarcoma .m 97 to 847 743 to 1   tiling clone,   743/754
(98 %)
10 diff
(98.7 %id)
AF129927 heart .m 106 to 1456 18 to 1369   tiling clone,   1352/1369
(98 %)
7 diff
(99.5 %id)
BQ008057 Chondrosarcoma, Left Pelvis .n 1 to 781 796 to 19 L3C L4C F5Y I6F F7X ... tiling clone, AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 778/792
(98 %)
6 diff
(99.3 %id)
AI948496 2 pooled tumors (clear cell type), Kidney .n 170 to 784 615 to 1       615/615
(100 %)
0 diff
(100 %id)
AA449555   .n 177 to 516 1 to 340       340/340
(100 %)
0 diff
(100 %id)
FN070398 breast carcinoma .n 195 to 285 1 to 87       87/87
(100 %)
4 diff
(95.5 %id)
FN107580 breast carcinoma .n 221 to 315 1 to 96       96/96
(100 %)
1 diff
(99.0 %id)
TI_149282597   .n 249 to 806 605 to 48       558/777
(71 %)
0 diff
(100 %id)
AW337120 adenocarcinoma, Pancreas .n 254 to 785 532 to 1       532/532
(100 %)
0 diff
(100 %id)
TI_154182811   .n 299 to 869 69 to 641       573/870
(65 %)
52 diff
(94.1 %id)
FN064168 breast carcinoma .n 303 to 372 1 to 69       69/72
(95 %)
2 diff
(97.3 %id)
BE501678 malignant melanoma, metastatic to lymphnode, skin .n 304 to 787 484 to 1       484/484
(100 %)
0 diff
(100 %id)
AA716674 heart .n 314 to 781 468 to 1       468/468
(100 %)
0 diff
(100 %id)
AW151678 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .n 324 to 787 464 to 1       464/464
(100 %)
0 diff
(100 %id)
AW440597 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .n 324 to 782 459 to 1       459/459
(100 %)
0 diff
(100 %id)
AI675915 adenocarcinoma, Pancreas .n 325 to 786 462 to 1       462/462
(100 %)
0 diff
(100 %id)
AA635630 normal prostate, Prostate .n 329 to 786 458 to 1       458/458
(100 %)
0 diff
(100 %id)
AA262822 germinal center B cell .n 334 to 722 1 to 389       389/389
(100 %)
0 diff
(100 %id)
AI146673 uterus .n 340 to 782 443 to 1       443/443
(100 %)
0 diff
(100 %id)
FN143455 breast carcinoma .n 398 to 499 1 to 97       97/97
(100 %)
5 diff
(94.9 %id)
FN102402 breast carcinoma .n 465 to 583 1 to 118       118/118
(100 %)
1 diff
(99.2 %id)
FN134862 breast carcinoma .n 465 to 581 1 to 118       118/119
(99 %)
2 diff
(98.4 %id)
FN164375 breast carcinoma .n 478 to 590 1 to 119       119/119
(100 %)
6 diff
(95.0 %id)
FN151140 breast carcinoma .n 483 to 570 1 to 87       87/105
(82 %)
5 diff
(95.3 %id)
TI_149312037   .n 509 to 1402 968 to 88   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 881/979
(89 %)
23 diff
(97.7 %id)
TI_154119426   .n 511 to 1402 960 to 76   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 885/997
(88 %)
28 diff
(97.2 %id)
FN162000 breast carcinoma .n 530 to 651 1 to 117       117/117
(100 %)
6 diff
(94.9 %id)
FN158834 breast carcinoma .n 535 to 619 1 to 84       84/84
(100 %)
1 diff
(98.9 %id)
FN153671 breast carcinoma .n 594 to 713 1 to 121       121/121
(100 %)
3 diff
(97.6 %id)
FN135500 breast carcinoma .n 633 to 763 1 to 127       127/127
(100 %)
7 diff
(94.5 %id)
TI_154111416   .n 638 to 1402 842 to 80   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 763/955
(79 %)
14 diff
(98.6 %id)
BM977760 lung, Primary Lung Cystic Fibrosis EpithelialCells .n 688 to 1402 730 to 16   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 715/715
(100 %)
2 diff
(99.8 %id)
CA448445 Chondrosarcoma, Left Pubic Bone .n 699 to 1402 720 to 16   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 705/705
(100 %)
3 diff
(99.6 %id)
FN051643 breast carcinoma .n 724 to 779 1 to 56       56/59
(94 %)
1 diff
(98.4 %id)
W78992 liver and spleen .n 733 to 1122 1 to 390   tiling clone, fully sequenced,   390/390
(100 %)
0 diff
(100 %id)
CA428116 Bone, Subchondral Bone .n 751 to 1402 671 to 19   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 653/653
(100 %)
1 diff
(99.9 %id)
TI_149307834   .n 784 to 1402 705 to 92   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 614/1026
(59 %)
17 diff
(98.4 %id)
AA173998   .n 809 to 1120 1 to 311   fully sequenced,   311/311
(100 %)
0 diff
(100 %id)
AA173717   .n 834 to 1066 1 to 245   fully sequenced,   245/245
(100 %)
0 diff
(100 %id)
FN091737 breast carcinoma .n 840 to 950 1 to 113       113/113
(100 %)
2 diff
(98.3 %id)
TI_149280248   .n 848 to 1402 638 to 84   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 555/1185
(46 %)
0 diff
(100 %id)
AW418736 pooled .n 857 to 1402 546 to 1       546/546
(100 %)
0 diff
(100 %id)
BF732962 fibrotheoma, ovary .n 866 to 1399 534 to 1       534/534
(100 %)
0 diff
(100 %id)
T89205 lung .n 881 to 1127 1 to 247   fully sequenced,   247/247
(100 %)
0 diff
(100 %id)
AI681949 carcinoid, lung .n 881 to 1405 525 to 1       525/525
(100 %)
0 diff
(100 %id)
FN079117 breast carcinoma .n 888 to 945 1 to 58       58/59
(98 %)
1 diff
(98.4 %id)
AA449295   .n 911 to 1406 499 to 4       496/499
(99 %)
0 diff
(100 %id)
AI073483   .n 926 to 1405 480 to 1       480/480
(100 %)
0 diff
(100 %id)
AA946912 2 pooled tumors (clear cell type), Kidney .n 948 to 1402 466 to 12   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 455/455
(100 %)
0 diff
(100 %id)
AI734917 aorta .n 951 to 1399 449 to 1       449/449
(100 %)
0 diff
(100 %id)
AI091914 heart .n 957 to 1402 446 to 1       446/446
(100 %)
0 diff
(100 %id)
AI148799 placenta .n 959 to 1406 452 to 5   tiling clone,   448/452
(99 %)
0 diff
(100 %id)
AI052205 liver and spleen .n 960 to 1399 440 to 1       440/440
(100 %)
0 diff
(100 %id)
AI564011 anaplastic oligodendroglioma, brain .n 961 to 1402 442 to 1       442/442
(100 %)
0 diff
(100 %id)
AA173551   .n 1036 to 1403 371 to 1   fully sequenced,   371/371
(100 %)
0 diff
(100 %id)
EC525250 Prostate .n 1040 to 1131 1 to 94       94/94
(100 %)
5 diff
(94.7 %id)
FN094245 breast carcinoma .n 1058 to 1153 1 to 96       96/96
(100 %)
0 diff
(100 %id)
AA176694   .n 1090 to 1403 311 to 1   fully sequenced,   311/311
(100 %)
0 diff
(100 %id)
W80618 liver and spleen .n 1092 to 1403 313 to 1   fully sequenced,   313/313
(100 %)
1 diff
(99.7 %id)
T89116 lung .n 1097 to 1403 316 to 1   fully sequenced,   316/316
(100 %)
1 diff
(99.7 %id)
AA262823 germinal center B cell .n 1105 to 1402 298 to 1       298/298
(100 %)
0 diff
(100 %id)
FN060824 breast carcinoma .n 1180 to 1282 1 to 104       104/104
(100 %)
1 diff
(99.1 %id)
FN147121 breast carcinoma .n 1215 to 1316 1 to 102       102/107
(95 %)
4 diff
(96.3 %id)
BG034296 breast, mammary adenocarcinoma, cell line .o 1 to 768 1 to 762 exact tiling clone,   762/946
(80 %)
26 diff
(97.3 %id)
DA545312   .o 6 to 527 2 to 522   capped   521/521
(100 %)
1 diff
(99.9 %id)
BE150387 head_neck .o 73 to 618 1 to 544 I23M K35N C40R tiling clone,   544/549
(99 %)
18 diff
(96.8 %id)
CD707570 normal nasopharynx .p-u 1 to 573 14 to 585 exact tiling clone,   572/585
(97 %)
6 diff
(99.0 %id)
CB268038 adipose .p-u 128 to 754 1 to 627 exact tiling clone,   627/627
(100 %)
1 diff
(99.9 %id)
FN130850 breast carcinoma .p-u 181 to 233 55 to 3     Submitted on the opposite strand 53/56
(94 %)
0 diff
(100 %id)
BG541669 lung .q-u 1 to 623 1 to 623 exact tiling clone, AAA   623/628
(99 %)
10 diff
(98.5 %id)
CB962377 Blood vessels - aorta, basilar and artery .r-u 1 to 544 1 to 545 V69X D84N N94X tiling clone,   545/546
(99 %)
7 diff
(98.8 %id)
BG956719 colon .s-u 1 to 432 46 to 478 I2V C3V S5F P6T L7T ... tiling clone,   433/478
(90 %)
6 diff
(98.8 %id)
CV354764 colon .s-u 227 to 503 15 to 294   tiling clone,   280/299
(93 %)
11 diff
(96.4 %id)
BF911279 uterus_tumor .t-u 1 to 395 17 to 412 exact tiling clone,   396/415
(95 %)
6 diff
(98.6 %id)
BF911282 uterus_tumor .t-u 1 to 379 18 to 396 V2A tiling clone,   379/396
(95 %)
10 diff
(97.5 %id)
BF911367 uterus_tumor .t-u 1 to 370 14 to 383 V2A     370/383
(96 %)
6 diff
(98.5 %id)
BF912055 uterus_tumor .t-u 1 to 361 17 to 377 exact     361/377
(95 %)
6 diff
(98.5 %id)
BE771047 prostate_tumor Gene TMEM87A, variant not shown         This clone was ignored    
BE771051 prostate_tumor Gene TMEM87A, variant not shown         This clone was ignored    
EL955525 eyeball Gene TMEM87A, variant not shown         This clone was ignored    
BE563118 adenocarcinoma, Pancreas Gene TMEM87A, variant not shown         Suspected internal deletion, this clone was ignored    
TI_44168062   Gene TMEM87A, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p-u, .q-u, .r-u, .s-u, .t-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C