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Gene CCDC69TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
265 supporting clones for gene CCDC69 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AL713742 amygdala .a 1 to 3322 1 to 3319 R212K tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 3319/3319
(100 %)
4 diff
(99.9 %id)
BM454239 lymph, lymphoma, cell line .a 1448 to 2051 1 to 609       609/1166
(52 %)
11 diff
(99.1 %id)
BG740028 skin .a 1457 to 2176 1 to 723       723/831
(87 %)
10 diff
(98.8 %id)
BF183140 large cell carcinoma, lung .a 1541 to 2085 1 to 541       541/541
(100 %)
5 diff
(99.1 %id)
CX781496 human embryonic stem cells .a 1541 to 2397 1 to 854       854/854
(100 %)
1 diff
(99.9 %id)
FN116213 breast carcinoma .a 1557 to 1655 101 to 1     Submitted on the opposite strand 101/101
(100 %)
2 diff
(98.1 %id)
CD691913 normal nasopharynx .a 1581 to 1755 19 to 192       174/192
(90 %)
6 diff
(96.9 %id)
BM466120 embryonal carcinoma, cell line, testis .a 1608 to 2554 1 to 946       946/1051
(90 %)
22 diff
(98.0 %id)
CD517324 White Matter .a 1677 to 2561 1 to 888       888/888
(100 %)
8 diff
(99.1 %id)
CR613734 Placenta Cot 25-normalized .a 1680 to 3290 1 to 1611   tiling clone,   1611/1611
(100 %)
0 diff
(100 %id)
AL546263 placenta, Placenta Cot 25-normalized .a 1680 to 2495 1 to 807   fully sequenced,   807/807
(100 %)
14 diff
(98.3 %id)
AA320455 adipose tissue, white .a 1686 to 1933 1 to 250       250/261
(95 %)
7 diff
(97.4 %id)
BE271239 Burkitt lymphoma, lymph .a 1755 to 2505 32 to 781   fully sequenced,   750/781
(96 %)
10 diff
(98.8 %id)
BE268670 Burkitt lymphoma, lymph .a 1760 to 2476 38 to 748       711/790
(90 %)
17 diff
(97.9 %id)
BE561998 Burkitt lymphoma, lymph .a 1760 to 2508 44 to 800       757/926
(81 %)
15 diff
(98.4 %id)
BI227227 Burkitt lymphoma, lymph .a 1760 to 2421 55 to 739       685/739
(92 %)
7 diff
(99.1 %id)
BE562320 Burkitt lymphoma, lymph .a 1761 to 2583 36 to 854       819/930
(88 %)
19 diff
(98.0 %id)
BE562315 Burkitt lymphoma, lymph .a 1761 to 2550 32 to 815       784/815
(96 %)
6 diff
(99.3 %id)
BE562007 Burkitt lymphoma, lymph .a 1761 to 2528 37 to 811       775/937
(82 %)
21 diff
(97.8 %id)
BI225188 Burkitt lymphoma, lymph .a 1764 to 2488 1 to 732       732/733
(99 %)
18 diff
(97.6 %id)
BI225268 Burkitt lymphoma, lymph .a 1764 to 2473 1 to 710       710/710
(100 %)
2 diff
(99.8 %id)
BI226685 Burkitt lymphoma, lymph .a 1764 to 2617 1 to 867       867/920
(94 %)
33 diff
(96.5 %id)
BI226966 Burkitt lymphoma, lymph .a 1764 to 2286 1 to 523       523/523
(100 %)
0 diff
(100 %id)
BP300637   .a 1766 to 2356 1 to 592       592/592
(100 %)
2 diff
(99.7 %id)
AA349123 adrenal gland .a 1772 to 2159 1 to 389       389/389
(100 %)
9 diff
(97.7 %id)
T39527 placenta .a 1785 to 1983 1 to 196       196/196
(100 %)
1 diff
(99.5 %id)
BE873786 large cell carcinoma, undifferentiated, lung .a 1818 to 2548 1 to 729       729/749
(97 %)
15 diff
(98.0 %id)
BM458683 lymph, lymphoma, cell line .a 1842 to 2279 1 to 435       435/442
(98 %)
2 diff
(99.6 %id)
BG177199 lymph, lymphoma, cell line .a 1850 to 2617 1 to 769       769/865
(88 %)
14 diff
(98.4 %id)
BM153584 leukopheresis .a 1909 to 2531 623 to 1       623/623
(100 %)
4 diff
(99.4 %id)
BM472455 embryonal carcinoma, cell line, testis .a 1915 to 2809 1 to 905       905/993
(91 %)
22 diff
(97.8 %id)
AA368039 placenta .a 1920 to 2183 264 to 1       264/264
(100 %)
1 diff
(99.7 %id)
BM145302 leukopheresis .a 1929 to 2531 604 to 1       604/604
(100 %)
6 diff
(99.1 %id)
AL044291 testis .a 1942 to 2497 1 to 556       556/556
(100 %)
3 diff
(99.5 %id)
AW403112 lymph .a 1972 to 2243 1 to 272     Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 272/272
(100 %)
12 diff
(95.6 %id)
AA286789 germinal center B cell .a 1979 to 2521 1 to 540       540/540
(100 %)
4 diff
(99.3 %id)
BI053194 placenta_normal .a 2024 to 2191 1 to 165       165/171
(96 %)
9 diff
(94.8 %id)
AJ708800 heart .a 2085 to 2615 13 to 545       533/545
(97 %)
6 diff
(98.9 %id)
BM193514 leukopheresis .a 2119 to 2531 412 to 1       412/427
(96 %)
12 diff
(97.2 %id)
BQ213962 embryonal carcinoma, cell line, testis .a 2125 to 2817 1 to 702       702/1216
(57 %)
15 diff
(98.8 %id)
T40652 placenta .a 2169 to 2530 362 to 1       362/362
(100 %)
0 diff
(100 %id)
AW887811 ovary .a 2176 to 2750 1 to 575       575/575
(100 %)
23 diff
(96.0 %id)
CD627131   .a 2176 to 2668 635 to 143       493/499
(98 %)
0 diff
(100 %id)
BF917183 uterus_tumor .a 2178 to 2770 1 to 593       593/593
(100 %)
3 diff
(99.5 %id)
BQ226127 embryonal carcinoma, cell line, testis .a 2203 to 2975 1 to 777   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 777/777
(100 %)
7 diff
(99.1 %id)
BM193639 leukopheresis .a 2206 to 2531 326 to 1       326/326
(100 %)
4 diff
(98.8 %id)
AA082474   .a 2213 to 2481 1 to 255   fully sequenced,   255/255
(100 %)
20 diff
(92.2 %id)
CD627129   .a 2217 to 2718 504 to 3       502/504
(99 %)
0 diff
(100 %id)
BM193485 leukopheresis .a 2229 to 2531 304 to 1       304/309
(98 %)
4 diff
(98.8 %id)
BG532967 embryonal carcinoma, testis .a 2256 to 3116 1 to 875       875/875
(100 %)
35 diff
(96.0 %id)
AA100957   .a 2257 to 2488 232 to 1   fully sequenced,   232/232
(100 %)
0 diff
(100 %id)
BM193631 leukopheresis .a 2265 to 2531 269 to 1       269/269
(100 %)
13 diff
(95.2 %id)
BF847305 lung_normal .a 2361 to 2799 1 to 446       446/446
(100 %)
21 diff
(95.3 %id)
BI054027 placenta_normal .a 2386 to 2860 474 to 1       474/474
(100 %)
8 diff
(98.4 %id)
AW880220 ovary .a 2394 to 2801 413 to 6       408/413
(98 %)
0 diff
(100 %id)
BM151331 leukopheresis .a 2398 to 2531 134 to 1       134/134
(100 %)
2 diff
(98.6 %id)
TI_154135602   .a 2398 to 3165 857 to 85       773/897
(86 %)
0 diff
(100 %id)
BI011787 lung_normal .a 2406 to 2836 430 to 1       430/430
(100 %)
8 diff
(98.2 %id)
CA426990 Bone, Subchondral Bone .a 2419 to 3140 739 to 19   AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 721/721
(100 %)
3 diff
(99.6 %id)
CB267863 adipose .a 2423 to 2970 1 to 546       546/546
(100 %)
2 diff
(99.7 %id)
BG832083 epithelioid carcinoma cell line, Pancreas .a 2430 to 3125 1 to 706   AAA   706/742
(95 %)
10 diff
(98.7 %id)
BY996336   .a 2437 to 3096 10 to 669       660/669
(98 %)
1 diff
(99.9 %id)
AL571784 placenta, Placenta Cot 25-normalized .a 2465 to 3290 814 to 1   fully sequenced,   814/814
(100 %)
26 diff
(96.9 %id)
BE271135 Burkitt lymphoma, lymph .a 2467 to 3254 794 to 3   fully sequenced,   792/794
(99 %)
0 diff
(100 %id)
BP431180   .a 2488 to 2858 1 to 373       373/373
(100 %)
7 diff
(98.2 %id)
H03304 placenta .a 2500 to 2856 1 to 365       365/419
(87 %)
12 diff
(97.2 %id)
AA720664 germinal center B-cells, tonsil .a 2507 to 2982 477 to 2       476/477
(99 %)
0 diff
(100 %id)
Z22000   .a 2533 to 2792 257 to 1       257/259
(99 %)
7 diff
(97.3 %id)
TI_154059464   .a 2598 to 3070 826 to 356       471/1061
(44 %)
0 diff
(100 %id)
AA651864 germinal center B cell .a 2618 to 2975 399 to 43   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 357/357
(100 %)
3 diff
(99.2 %id)
TI_154134660   .a 2643 to 3140 612 to 106   AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 507/1244
(40 %)
16 diff
(98.8 %id)
TI_154132587   .a 2651 to 3322 783 to 101   AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 683/910
(75 %)
36 diff
(96.1 %id)
BG945682 bladder_normal .a 2662 to 3070 1 to 409       409/409
(100 %)
7 diff
(98.3 %id)
CA425459 Bone, Subchondral Bone .a 2704 to 3322 637 to 19   AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 619/619
(100 %)
0 diff
(100 %id)
H04867 placenta .a 2725 to 3038 1 to 318   fully sequenced,   318/318
(100 %)
0 diff
(100 %id)
H39611 breast .a 2727 to 3078 1 to 353       353/449
(78 %)
6 diff
(98.7 %id)
AI635274 adenocarcinoma, Pancreas .a 2735 to 3148 415 to 2       414/415
(99 %)
0 diff
(100 %id)
BM673716 eye, eye anterior segment .a 2747 to 3140 412 to 19   AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 394/396
(99 %)
2 diff
(99.5 %id)
AA721577 breast, normal ductal tissue .a 2754 to 2980 1 to 226       226/258
(87 %)
15 diff
(94.2 %id)
AJ709935 heart .a 2763 to 3290 1 to 527       527/527
(100 %)
1 diff
(99.9 %id)
AA180964 muscle, skeletal muscle .a 2765 to 3114 1 to 349       349/349
(100 %)
6 diff
(98.3 %id)
F23274 pectoral muscle (after mastectomy) .a 2808 to 3056 1 to 249       249/249
(100 %)
3 diff
(98.8 %id)
AI301273 carcinoid, lung .a 2809 to 3141 333 to 1       333/333
(100 %)
1 diff
(99.7 %id)
AI287485 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 2809 to 3149 341 to 1       341/341
(100 %)
0 diff
(100 %id)
AW575165 lymph .a 2809 to 3322 532 to 18   AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 515/515
(100 %)
1 diff
(99.9 %id)
F34511 pectoral muscle (after mastectomy) .a 2833 to 3064 1 to 232       232/232
(100 %)
1 diff
(99.6 %id)
F34826 pectoral muscle (after mastectomy) .a 2833 to 3057 1 to 225       225/225
(100 %)
0 diff
(100 %id)
AI718446 colon .a 2844 to 3317 479 to 6       474/479
(98 %)
0 diff
(100 %id)
AW512330 lymph node, lymphoma, follicular mixed small and largecell .a 2867 to 3323 471 to 15       457/471
(97 %)
0 diff
(100 %id)
N32118 placenta .a 2896 to 3323 429 to 3       427/429
(99 %)
0 diff
(100 %id)
AA287550 germinal center B cell .a 2909 to 3323 425 to 11       415/425
(97 %)
0 diff
(100 %id)
BE714181 head_neck .a 2922 to 3286 14 to 376       363/376
(96 %)
6 diff
(98.5 %id)
AA808337 germinal center B cell .a 2929 to 3322 413 to 20   AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 394/394
(100 %)
0 diff
(100 %id)
H04771 placenta .a 3008 to 3316 315 to 6   fully sequenced,   310/315
(98 %)
4 diff
(98.8 %id)
AI280768 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 3074 to 3323 256 to 6       251/256
(98 %)
0 diff
(100 %id)
AW879749 ovary .a 3088 to 3275 213 to 27       187/213
(87 %)
0 diff
(100 %id)
BE156890 head_neck .a 3108 to 3212 109 to 1     Submitted on the opposite strand 109/117
(93 %)
5 diff
(95.8 %id)
BG960611 colon .a 3123 to 3315 199 to 3       197/199
(98 %)
0 diff
(100 %id)
BI054359 placenta_normal .a 3124 to 3308 186 to 2       185/186
(99 %)
0 diff
(100 %id)
BM969431 lung, Primary Lung Epithelial Cells .a 3125 to 3322 216 to 19   AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 198/242
(81 %)
3 diff
(98.8 %id)
AW407059 lymph .a 3134 to 3323 205 to 16     Submitted on the opposite strand 190/205
(92 %)
0 diff
(100 %id)
AA344102 gall bladder .a 3160 to 3322 163 to 1     Submitted on the opposite strand 163/163
(100 %)
0 diff
(100 %id)
BM146403 leukopheresis .b 1 to 402 7 to 405       405/409
(99 %)
17 diff
(95.9 %id)
DA819337   .b 1 to 514 6 to 519   capped   518/518
(100 %)
1 diff
(99.9 %id)
DB074762 testis .b 1 to 453 6 to 458   capped   457/457
(100 %)
0 diff
(100 %id)
DB292518 uterus .b 1 to 493 2 to 494   tiling clone, capped   493/493
(100 %)
0 diff
(100 %id)
DA990048 synovial membrane tissue from rheumatioidarthritis .b 23 to 555 2 to 534   capped   533/533
(100 %)
1 diff
(99.9 %id)
DB232394 trachea .b 24 to 620 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA018128 adrenal gland .b 28 to 501 2 to 475   capped   474/474
(100 %)
1 diff
(99.8 %id)
DB164756 thymus .b 35 to 460 152 to 578   capped   427/577
(74 %)
6 diff
(99.0 %id)
TI_57234572   .b 39 to 781 55 to 794       740/810
(91 %)
12 diff
(98.6 %id)
DA458347 tongue, tumor tissue .b 44 to 614 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
BG722504 testis .b 44 to 677 1 to 644       641/828
(77 %)
35 diff
(95.8 %id)
DA995078 synovial membrane tissue from rheumatioidarthritis .b 45 to 585 2 to 545   capped   544/544
(100 %)
4 diff
(99.3 %id)
AK292841 trachea .b 48 to 1464 1 to 1416 R197K     1416/1416
(100 %)
3 diff
(99.8 %id)
BI908808 leukocyte .b 48 to 781 1 to 731       731/747
(97 %)
7 diff
(99.1 %id)
NM_015621.2   .b 48 to 3445 1 to 3398 exact RefSeq, AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 3398/3398
(100 %)
0 diff
(100 %id)
BM152786 leukopheresis .b 48 to 532 1 to 482       485/485
(100 %)
18 diff
(96.3 %id)
DA577463   .b 49 to 598 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
DB112065 thymus .b 49 to 637 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DB133847 thymus .b 49 to 567 2 to 524   capped   523/528
(99 %)
8 diff
(98.5 %id)
BP366344   .b 49 to 630 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DB217429 trachea .b 49 to 599 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
TI_1540413242   .b 49 to 367 320 to 2       319/425
(75 %)
0 diff
(100 %id)
TI_1540413336   .b 49 to 368 321 to 2       320/429
(74 %)
0 diff
(100 %id)
DA154572 amygdala .b 50 to 607 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DA403497 thalamus .b 50 to 602 2 to 555   capped   554/555
(99 %)
4 diff
(99.3 %id)
DA591567 lung .b 50 to 632 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA819410   .b 50 to 614 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA995547 synovial membrane tissue from rheumatioidarthritis .b 50 to 620 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DB093517 testis .b 50 to 616 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DB154130 thymus .b 50 to 660 2 to 612   capped   611/611
(100 %)
0 diff
(100 %id)
DB222549 trachea .b 50 to 619 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB268149 uterus .b 50 to 541 2 to 493   capped   492/492
(100 %)
2 diff
(99.6 %id)
BG624002 placenta .b 53 to 682 1 to 639       637/639
(99 %)
30 diff
(95.4 %id)
CR997228 T-Lymphocytes .b 56 to 867 1 to 812       812/812
(100 %)
3 diff
(99.7 %id)
BQ067214 pooled brain, lung, testis .b 64 to 892 19 to 848       830/1109
(74 %)
20 diff
(98.2 %id)
DB164747 thymus .b 67 to 601 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
BG398484 B-cells, primary B-cells from tonsils (cell line) .b 68 to 785 1 to 722       722/956
(75 %)
11 diff
(98.9 %id)
CN262286 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 69 to 516 1 to 448       448/448
(100 %)
1 diff
(99.8 %id)
BG332170 large cell carcinoma, lung .b 71 to 761 1 to 717       533/1020
(52 %)
28 diff
(97.3 %id)
CD627125   .b 72 to 826 1 to 755       755/755
(100 %)
11 diff
(98.6 %id)
BU186475 embryonal carcinoma, cell line, testis .b 72 to 716 1 to 657       657/933
(70 %)
12 diff
(98.8 %id)
BQ932876 large cell carcinoma, lung .b 74 to 402 1 to 334       334/836
(39 %)
9 diff
(99.0 %id)
BQ953955 large cell carcinoma, lung .b 74 to 890 1 to 827       827/863
(95 %)
14 diff
(98.4 %id)
DB135771 thymus .b 74 to 619 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
AK225826 Spleen .b 78 to 3445 1 to 3368 R197K tiling clone, AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 3368/3368
(100 %)
2 diff
(100.0 %id)
CB266575 adipose .b 85 to 601 1 to 517       517/517
(100 %)
1 diff
(99.9 %id)
BF129150 B-cells, primary B-cells from tonsils (cell line) .b 88 to 651 1 to 574       574/1026
(55 %)
39 diff
(96.2 %id)
BF794385 lymph, lymphoma, cell line .b 98 to 680 22 to 606       583/958
(60 %)
17 diff
(98.3 %id)
DB137466 thymus .b 163 to 720 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
BE144216 head_neck .b 170 to 559 17 to 406       390/406
(96 %)
8 diff
(98.1 %id)
DA823852 pericardium .b 269 to 815 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
AK023767 placenta .b 270 to 3263 1 to 2993   tiling clone, available from FLJ,   2993/2993
(100 %)
6 diff
(99.8 %id)
AU140307 placenta .b 271 to 1002 2 to 732   capped   731/733
(99 %)
2 diff
(99.8 %id)
DB076432 testis .b 302 to 867 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DN996504 breast cancer, Mammary gland (cancer tissue) .b 315 to 891 1 to 577       577/577
(100 %)
4 diff
(99.4 %id)
BX500502 Liver .b 332 to 1036 1 to 704       704/704
(100 %)
3 diff
(99.6 %id)
BG389756 embryonal carcinoma, cell line, testis .b 351 to 1062 1 to 710       710/763
(93 %)
32 diff
(95.9 %id)
DA981793 synovial membrane tissue from rheumatioidarthritis .b 354 to 915 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB161061 thymus .b 354 to 828 2 to 476   capped   475/475
(100 %)
0 diff
(100 %id)
BQ055229 lymph, lymphoma, cell line .b 405 to 933 1 to 529       529/1210
(43 %)
3 diff
(99.8 %id)
BQ063523 lymph, lymphoma, cell line .b 405 to 1299 1 to 911       911/1106
(82 %)
36 diff
(96.8 %id)
BQ059663 lymph, lymphoma, cell line .b 445 to 1361 1 to 931       931/1001
(93 %)
18 diff
(98.3 %id)
BQ063874 lymph, lymphoma, cell line .b 445 to 1173 1 to 732       732/1085
(67 %)
6 diff
(99.5 %id)
BQ063959 lymph, lymphoma, cell line .b 445 to 1171 1 to 732       732/1082
(67 %)
7 diff
(99.4 %id)
BQ064189 lymph, lymphoma, cell line .b 445 to 1328 1 to 895       895/954
(93 %)
19 diff
(98.1 %id)
BQ642871 lymph, lymphoma, cell line .b 445 to 1283 1 to 857       857/919
(93 %)
27 diff
(97.1 %id)
BQ421385 embryonal carcinoma, cell line, testis .b 465 to 1273 1 to 816       816/894
(91 %)
12 diff
(98.7 %id)
CT001635 T-Lymphocytes .b 519 to 1293 1 to 781       781/826
(94 %)
8 diff
(99.1 %id)
BG176637 lymph, lymphoma, cell line .b 533 to 1322 1 to 798       798/920
(86 %)
14 diff
(98.5 %id)
BM927471 lymph, lymphoma, cell line .b 540 to 1530 10 to 1011       1002/1084
(92 %)
23 diff
(97.9 %id)
BQ061885 lymph, lymphoma, cell line .b 588 to 1530 1 to 945       945/1014
(93 %)
13 diff
(98.8 %id)
DA765656 tongue .b 630 to 1198 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
BQ355233 head_neck .b 661 to 1191 58 to 589       537/590
(91 %)
22 diff
(96.3 %id)
DA644570   .b 669 to 1252 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA945997 Spleen .b 688 to 1256 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA767548 tongue .b 737 to 1300 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
AA346839 heart .b 775 to 1004 1 to 229       229/229
(100 %)
3 diff
(98.7 %id)
DA591569 lung .b 779 to 1360 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DB206850 trachea .b 799 to 1346 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
AY538626   .b 838 to 1447 1 to 610       610/610
(100 %)
0 diff
(100 %id)
CV025005 mixed .b 838 to 1443 1 to 604       604/604
(100 %)
3 diff
(99.6 %id)
DA463252   .b 838 to 1377 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
AL080169 testis .b 848 to 3445 1 to 2595   available from DKFZ, AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 2595/2595
(100 %)
6 diff
(99.8 %id)
CF136134 lymph .b 862 to 1472 8 to 618       611/618
(98 %)
8 diff
(98.8 %id)
TI_154165021   .b 862 to 1626 69 to 820       752/898
(83 %)
29 diff
(96.8 %id)
AW405271 lymph .b 872 to 1250 8 to 386       379/386
(98 %)
0 diff
(100 %id)
TI_154147843   .b 872 to 1530 80 to 738       659/663
(99 %)
8 diff
(98.8 %id)
AW401764 lymph .b 902 to 1370 8 to 476       469/476
(98 %)
6 diff
(98.8 %id)
TI_154137908   .b 902 to 1530 78 to 710       633/960
(65 %)
16 diff
(98.4 %id)
W37560 parathyroid gland, parathyroid tumor .b 936 to 1273 4 to 346   fully sequenced,   343/346
(99 %)
10 diff
(97.2 %id)
DA009533 adrenal gland .b 964 to 1525 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
AI660076 thymus, pooled .b 971 to 1544 579 to 12   AAA   568/601
(94 %)
11 diff
(98.2 %id)
AW504659 lymph .b 998 to 1450 1 to 452       452/452
(100 %)
9 diff
(98.1 %id)
BG684255 B-cells, primary B-cells from tonsils (cell line) .b 998 to 1598 1 to 601       601/601
(100 %)
2 diff
(99.7 %id)
BG685464 B-cells, primary B-cells from tonsils (cell line) .b 998 to 1785 1 to 799       799/807
(99 %)
21 diff
(97.4 %id)
TI_154160932   .b 1004 to 1659 75 to 724       650/720
(90 %)
38 diff
(94.8 %id)
AA112775 muscle, skeletal muscle .b 1072 to 1461 1 to 393       393/393
(100 %)
3 diff
(99.3 %id)
BF987971 placenta_normal .b 1105 to 1441 359 to 26       334/359
(93 %)
0 diff
(100 %id)
BF990283 placenta_normal .b 1105 to 1437 1 to 332       332/332
(100 %)
2 diff
(99.4 %id)
BF995343 placenta_normal .b 1105 to 1437 1 to 332       332/332
(100 %)
2 diff
(99.4 %id)
BG001966 placenta_normal .b 1105 to 1437 1 to 332       332/332
(100 %)
2 diff
(99.4 %id)
BM552551 leiomyosarcoma, uterus .b 1122 to 2043 1 to 930       930/1021
(91 %)
28 diff
(97.3 %id)
ES312853 beard hair, skin .b 1127 to 1297 1 to 171       171/171
(100 %)
1 diff
(99.5 %id)
CD627128   .b 1130 to 1902 1 to 777       777/777
(100 %)
12 diff
(98.5 %id)
AW408352 lymph .b 1149 to 1606 8 to 465       458/465
(98 %)
6 diff
(98.8 %id)
TI_154147958   .b 1149 to 1851 86 to 782       697/697
(100 %)
28 diff
(96.0 %id)
BQ052711 blood, natural killer cells, cell line .b 1176 to 2006 1 to 837       837/1036
(80 %)
18 diff
(98.3 %id)
DB201120 trachea .b 1196 to 1767 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DB008301 cervix, tumor tissue .b 1198 to 1651 2 to 456   capped   455/455
(100 %)
5 diff
(99.0 %id)
W37220 parathyroid gland, parathyroid tumor .b 1243 to 1537 297 to 1   fully sequenced,   297/297
(100 %)
2 diff
(99.4 %id)
DA952963 Spleen .b 1258 to 1801 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
BF183217 large cell carcinoma, lung .b 1265 to 2033 1 to 774       774/912
(84 %)
15 diff
(98.4 %id)
DA559946 heart .b 1296 to 1844 2 to 550   capped   549/549
(100 %)
3 diff
(99.5 %id)
CD627127   .b 1317 to 1924 627 to 20       608/627
(96 %)
0 diff
(100 %id)
BF338246 brain, glioblastoma with EGFR amplification .b 1322 to 1901 1 to 578       578/578
(100 %)
5 diff
(99.2 %id)
AW401675 lymph .b 1324 to 1733 8 to 417       410/417
(98 %)
0 diff
(100 %id)
TI_154137804   .b 1324 to 1896 81 to 653       573/575
(99 %)
7 diff
(98.8 %id)
CF143848 lymph .b 1360 to 1662 8 to 310       303/310
(97 %)
6 diff
(98.1 %id)
DA948910 Spleen .b 1388 to 1945 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
CD627132   .b 1401 to 2152 15 to 768       754/768
(98 %)
6 diff
(99.3 %id)
BG758312 B-cells, primary B-cells from tonsils (cell line) .b 1447 to 2368 1 to 925       925/1030
(89 %)
26 diff
(97.5 %id)
BG757959 B-cells, primary B-cells from tonsils (cell line) .b 1447 to 2324 1 to 875       875/882
(99 %)
38 diff
(95.7 %id)
BG754176 B-cells, primary B-cells from tonsils (cell line) .b 1454 to 2367 1 to 906       906/906
(100 %)
20 diff
(97.8 %id)
CD627130   .b 1482 to 2307 15 to 847       833/849
(98 %)
18 diff
(97.9 %id)
BQ955316 large cell carcinoma, lung .b 1491 to 2425 1 to 938       938/941
(99 %)
19 diff
(98.0 %id)
CD703865 normal nasopharynx .b 1525 to 2173 12 to 660       649/660
(98 %)
6 diff
(99.1 %id)
AU158415 placenta .b 2768 to 3263 494 to 1       494/540
(91 %)
12 diff
(97.8 %id)
AA086487 muscle, skeletal muscle .b 2828 to 3230 402 to 1       402/403
(99 %)
4 diff
(99.1 %id)
AW972072   .c-u 1 to 585 1 to 585 G2L G160E F177I R192Q tiling clone,   585/585
(100 %)
10 diff
(98.3 %id)
BC016647 Lymph, lymphoma .d 1 to 2864 1 to 2863 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 2863/2863
(100 %)
2 diff
(100.0 %id)
BF795872 lymph, lymphoma, cell line .d 8 to 789 7 to 798   available from MGC,   796/1133
(70 %)
34 diff
(97.0 %id)
AK094658 amygdala .e 1 to 3251 2 to 3249 exact tiling clone, available from FLJ,   3249/3249
(100 %)
12 diff
(99.7 %id)
DA160503 amygdala .e 1 to 577 2 to 578   capped   577/577
(100 %)
9 diff
(98.5 %id)
DA348809 substantia nigra .e 680 to 1042 2 to 365   capped   364/364
(100 %)
1 diff
(99.8 %id)
DB302127 amygdala .e 2697 to 3251 555 to 1       555/555
(100 %)
1 diff
(99.9 %id)
DB165385 thymus .f 1 to 595 2 to 596 exact tiling clone, capped   595/595
(100 %)
0 diff
(100 %id)
BF890962 marrow .f 414 to 574 162 to 1     Submitted on the opposite strand 162/162
(100 %)
8 diff
(95.1 %id)
DB255139 uterus .g 1 to 579 2 to 580 exact tiling clone, capped   579/579
(100 %)
0 diff
(100 %id)
DA415419 thalamus .h 1 to 649 2 to 650 exact tiling clone, capped   649/650
(99 %)
2 diff
(99.7 %id)
TI_1540413148   .i 1 to 297 303 to 7 exact tiling clone,   297/411
(72 %)
0 diff
(100 %id)
BM149295 leukopheresis .j 1 to 292 1 to 292 S83C S89N K90E S93Y P95A ... tiling clone,   292/298
(97 %)
10 diff
(96.7 %id)
BM150079 leukopheresis .j 1 to 284 1 to 286   tiling clone,   286/291
(98 %)
17 diff
(94.2 %id)
BF872449 lung_tumor .k 1 to 432 434 to 3   tiling clone, Submitted on the opposite strand 432/460
(93 %)
0 diff
(100 %id)
AW501723 lymph .k 36 to 440 8 to 412       405/412
(98 %)
6 diff
(98.6 %id)
AW501934 lymph .k 36 to 483 8 to 455 exact     448/455
(98 %)
6 diff
(98.7 %id)
AW502546 lymph .k 36 to 445 8 to 417       410/417
(98 %)
6 diff
(98.6 %id)
AW502595 lymph .k 36 to 471 8 to 443       436/443
(98 %)
6 diff
(98.7 %id)
CF142517 lymph .k 36 to 448 8 to 420       413/420
(98 %)
6 diff
(98.6 %id)
CF142741 lymph .k 36 to 376 8 to 348       341/348
(97 %)
6 diff
(98.3 %id)
CF135456 lymph .k 36 to 443 8 to 415       408/415
(98 %)
6 diff
(98.6 %id)
TI_154156788   .k 36 to 535 80 to 579 G42X R45K     500/511
(97 %)
7 diff
(98.7 %id)
TI_154157076   .k 36 to 529 80 to 573 exact     494/496
(99 %)
5 diff
(99.0 %id)
TI_154158025   .k 36 to 662 91 to 717 exact     627/633
(99 %)
20 diff
(96.9 %id)
TI_154158154   .k 36 to 576 85 to 624 G42S S43N     540/540
(100 %)
14 diff
(97.5 %id)
TI_154163814   .k 36 to 648 69 to 685 R12I V40C I41T G42X R45T tiling clone,   617/1221
(50 %)
25 diff
(98.0 %id)
TI_154173546   .k 36 to 633 80 to 678 exact tiling clone,   599/602
(99 %)
8 diff
(98.7 %id)
DA938185 Spleen .k 394 to 984 2 to 593   tiling clone, capped   592/592
(100 %)
3 diff
(99.5 %id)
DB163689 thymus .l-u 1 to 576 2 to 577   tiling clone, capped   576/576
(100 %)
1 diff
(99.9 %id)
DA412803 thalamus .m 1 to 555 2 to 556   tiling clone, capped   555/555
(100 %)
2 diff
(99.7 %id)
AV701174 adrenal gland Gene CCDC69, variant not shown         Suspected internal deletion, this clone was ignored    
AK298063 lung Gene CCDC69, variant not shown         Suspected internal deletion, this clone was ignored    
BF992420 placenta_normal Gene CCDC69, variant not shown              
BG005563 placenta_normal Gene CCDC69, variant not shown         Suspected internal deletion, this clone was ignored    
DA404609 thalamus Gene CCDC69, variant not shown       capped Suspected internal deletion, this clone was ignored    
AF150383 umbilical cord blood Gene CCDC69, variant not shown              
AV740763 cord Blood Gene CCDC69, variant not shown              
CV327282 placenta_normal Gene CCDC69, variant not shown         Submitted on the opposite strand    
DC358816 lung Gene CCDC69, variant not shown         Suspected internal deletion, this clone was ignored    
BC013053 Lung, large cell carcinoma Gene CCDC69, variant not shown       AAA This clone was ignored    
BI906437 leukocyte Gene CCDC69, variant not shown         Suspected internal deletion, this clone was ignored    
TI_57232363   Gene CCDC69, variant not shown         Suspected internal deletion, this clone was ignored    
BP270890 small intestine Gene CCDC69, variant not shown         Suspected internal deletion, this clone was ignored    
DA937041 Spleen Gene CCDC69, variant not shown       capped Suspected internal deletion, this clone was ignored    
CA419700 Bone, Human Chondrosarcoma Cell Line Gene CCDC69, variant not shown       AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base)    
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C