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Gene TMX4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
583 supporting clones for gene TMX4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC044777 testis .a 1 to 6140 1 to 6139 exact tiling clone, available from MGC, AAA   6139/6139
(100 %)
7 diff
(99.9 %id)
DB461103 testis .a 2 to 474 1 to 473       473/473
(100 %)
0 diff
(100 %id)
BM560414 brain, medulla .a 12 to 594 10 to 594       585/1177
(49 %)
22 diff
(98.2 %id)
DA987810 synovial membrane tissue from rheumatioidarthritis .a 16 to 405 2 to 391   capped   390/390
(100 %)
1 diff
(99.8 %id)
DA173798 amygdala .a 18 to 283 2 to 267   capped   266/267
(99 %)
2 diff
(99.3 %id)
DA473526   .a 18 to 578 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
BU838336 dorsal root ganglia .a 18 to 774 1 to 760       760/941
(80 %)
16 diff
(98.3 %id)
BM787646 stomach .a 18 to 573 1 to 557       557/557
(100 %)
2 diff
(99.7 %id)
DB108558 thymus .a 18 to 590 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
CB990026 Human Placenta, placenta .a 21 to 690 24 to 698       675/786
(85 %)
17 diff
(97.9 %id)
CB990483 Human Placenta, placenta .a 21 to 594 24 to 596       573/654
(87 %)
10 diff
(98.5 %id)
CB989698 Human Placenta, placenta .a 21 to 678 24 to 682       659/813
(81 %)
31 diff
(96.2 %id)
AK075404   .a 22 to 2101 1 to 2080 exact     2080/2080
(100 %)
3 diff
(99.9 %id)
DA514794 brain .a 23 to 349 2 to 329   capped   328/328
(100 %)
3 diff
(99.1 %id)
DA732915   .a 23 to 577 2 to 556   capped   555/555
(100 %)
4 diff
(99.3 %id)
DA926935 small intestine .a 26 to 574 2 to 550   capped   549/550
(99 %)
3 diff
(99.5 %id)
BE799199 lung, small cell carcinoma .a 34 to 899 25 to 886       862/999
(86 %)
26 diff
(97.4 %id)
BG703344 brain, hippocampus .a 37 to 690 1 to 655       655/735
(89 %)
14 diff
(98.1 %id)
BI554017 brain, hippocampus .a 37 to 434 12 to 410       399/410
(97 %)
6 diff
(98.6 %id)
DB052569 testis .a 40 to 323 2 to 286   capped   285/285
(100 %)
1 diff
(99.7 %id)
DB457183 testis .a 42 to 551 1 to 511       511/511
(100 %)
3 diff
(99.5 %id)
DB469061 hippocampus .a 42 to 436 1 to 399       399/399
(100 %)
50 diff
(87.5 %id)
DA768412 brain .a 43 to 494 2 to 453   capped   452/452
(100 %)
1 diff
(99.8 %id)
DB257221 uterus .a 43 to 406 2 to 365   capped   364/364
(100 %)
0 diff
(100 %id)
DA152411 amygdala .a 47 to 615 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BU931873 ovary, teratocarcinoma, cell line .a 48 to 782 1 to 736       736/929
(79 %)
18 diff
(98.1 %id)
BG330706 large cell carcinoma, lung .a 51 to 832 1 to 796       796/930
(85 %)
31 diff
(96.7 %id)
BU171691 melanotic melanoma, skin .a 52 to 510 1 to 459       459/991
(46 %)
15 diff
(98.5 %id)
BQ941940 large cell carcinoma, lung .a 53 to 900 1 to 852       852/946
(90 %)
18 diff
(98.1 %id)
AL520211 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 59 to 1111 1 to 1042       1042/1068
(97 %)
21 diff
(98.1 %id)
BX387172 Neuroblastoma Cot 10-normalized .a 59 to 875 1 to 811       811/814
(99 %)
13 diff
(98.5 %id)
BX403304 Neuroblastoma Cot 10-normalized .a 59 to 986 1 to 927       927/1064
(87 %)
18 diff
(98.4 %id)
BX353335 Neuroblastoma Cot 25-normalized .a 60 to 1057 1 to 995       995/999
(99 %)
35 diff
(96.5 %id)
BG719173 testis .a 64 to 784 1 to 721       721/721
(100 %)
4 diff
(99.5 %id)
BI546636 brain, hippocampus .a 64 to 726 1 to 663       663/663
(100 %)
4 diff
(99.4 %id)
BI464100 testis .a 64 to 730 1 to 666       666/741
(89 %)
9 diff
(98.8 %id)
DA878509 Prostate .a 65 to 470 2 to 408   capped   407/407
(100 %)
2 diff
(99.6 %id)
DA347563 substantia nigra .a 67 to 634 2 to 569   capped   568/568
(100 %)
3 diff
(99.5 %id)
AK074838   .a 69 to 2101 1 to 2033 V289E available from FLJ,   2033/2033
(100 %)
4 diff
(99.9 %id)
DB453969 testis .a 69 to 549 1 to 481       481/481
(100 %)
3 diff
(99.4 %id)
DB472822 hippocampus .a 69 to 533 1 to 465       465/465
(100 %)
2 diff
(99.6 %id)
DB482743 hippocampus .a 69 to 566 1 to 498       498/498
(100 %)
2 diff
(99.6 %id)
BJ995718 hepatoblastoma .a 69 to 470 1 to 402       402/402
(100 %)
3 diff
(99.3 %id)
CB961698 placenta, pre-eclamptic placenta .a 69 to 822 28 to 789       762/807
(94 %)
26 diff
(96.8 %id)
DA733406   .a 69 to 274 2 to 207   capped   206/206
(100 %)
4 diff
(98.1 %id)
DA165356 amygdala .a 70 to 405 2 to 337   capped   336/336
(100 %)
0 diff
(100 %id)
DA488006 brain .a 70 to 611 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DA733705   .a 70 to 583 2 to 518   capped   515/517
(99 %)
7 diff
(98.7 %id)
DB050808 testis .a 70 to 612 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DB195181 trachea .a 70 to 530 2 to 462   capped   461/461
(100 %)
0 diff
(100 %id)
DA140799 alzheimer cortex .a 71 to 651 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
TI_44168913   .a 71 to 726 127 to 782       656/782
(83 %)
6 diff
(99.3 %id)
BG332204 large cell carcinoma, lung .a 73 to 774 1 to 701       679/951
(71 %)
36 diff
(96.3 %id)
DB046081 testis .a 80 to 644 10 to 575   capped   566/566
(100 %)
1 diff
(99.9 %id)
BQ950733 large cell carcinoma, lung .a 81 to 1028 1 to 953       953/962
(99 %)
14 diff
(98.6 %id)
AW161254 brain, frontal lobe .a 82 to 272 1 to 191       191/191
(100 %)
0 diff
(100 %id)
AY359004   .a 84 to 2448 1 to 2365 exact     2365/2368
(99 %)
4 diff
(99.9 %id)
NM_021156.2   .a 84 to 2451 1 to 2368 exact RefSeq,   2368/2368
(100 %)
4 diff
(99.9 %id)
CR622965 Placenta Cot 25-normalized .a 85 to 2084 1 to 2000 exact     2000/2000
(100 %)
0 diff
(100 %id)
AW248154 lung, small cell carcinoma .a 86 to 157 9 to 80       72/89
(80 %)
3 diff
(96.7 %id)
BG490995 large cell carcinoma, lung .a 86 to 607 18 to 556       515/556
(92 %)
16 diff
(97.2 %id)
CR609977 Neuroblastoma Cot 50-normalized .a 87 to 2088 1 to 2002 exact tiling clone,   2002/2002
(100 %)
0 diff
(100 %id)
AL530457 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 87 to 1061 1 to 973   fully sequenced,   973/973
(100 %)
8 diff
(99.2 %id)
BU540637 large cell carcinoma, lung .a 87 to 684 1 to 603   AAA   603/1071
(56 %)
11 diff
(99.0 %id)
BE799538 lung, small cell carcinoma .a 88 to 831 25 to 792       768/1268
(60 %)
35 diff
(97.3 %id)
CB216977 normal endometrium, mid-secretory phase,cycle day 23, uterus .a 88 to 720 1 to 633       633/633
(100 %)
0 diff
(100 %id)
BX365864 Neuroblastoma Cot 25-normalized .a 92 to 1007 33 to 946       914/946
(96 %)
34 diff
(96.5 %id)
AL560235 B cells (Ramos cell line), B cells from Burkitt lymphoma .a 92 to 1099 8 to 1008   fully sequenced,   1001/1008
(99 %)
14 diff
(98.7 %id)
DA005556   .a 97 to 432 2 to 337   capped   336/336
(100 %)
0 diff
(100 %id)
BX353231 Neuroblastoma Cot 25-normalized .a 99 to 1071 1 to 963       963/1002
(96 %)
19 diff
(98.2 %id)
AL543960 placenta, Placenta Cot 25-normalized .a 100 to 1049 16 to 957       942/957
(98 %)
14 diff
(98.6 %id)
BE788602 large cell carcinoma, lung .a 100 to 670 1 to 571       573/848
(67 %)
30 diff
(96.5 %id)
BE793903 lung, small cell carcinoma .a 101 to 892 1 to 789       789/939
(84 %)
27 diff
(97.2 %id)
BG699360 brain, hippocampus .a 102 to 854 1 to 755       755/755
(100 %)
15 diff
(98.1 %id)
BE784380 large cell carcinoma, lung .a 103 to 832 1 to 719       721/852
(84 %)
17 diff
(98.1 %id)
CR995831 T-Lymphocytes .a 105 to 311 1 to 208       208/208
(100 %)
1 diff
(99.6 %id)
AL524101 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 110 to 1094 1 to 985       985/1050
(93 %)
4 diff
(99.7 %id)
DA899819 skeletal muscle .a 110 to 349 2 to 241   capped   240/240
(100 %)
1 diff
(99.6 %id)
BQ270377 insulinoma, Pancreas .a 113 to 492 8 to 387     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 380/459
(82 %)
29 diff
(93.7 %id)
BQ935998 large cell carcinoma, lung .a 117 to 683 45 to 611       567/1102
(51 %)
26 diff
(97.7 %id)
DB123301 thymus .a 124 to 678 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA874444 Prostate .a 132 to 591 2 to 461   capped   460/460
(100 %)
0 diff
(100 %id)
DA561251 heart .a 137 to 707 9 to 580   capped   572/572
(100 %)
4 diff
(99.4 %id)
DB024447 testis .a 137 to 492 8 to 365   capped   358/358
(100 %)
3 diff
(99.2 %id)
AL524257 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 139 to 1143 1 to 991   fully sequenced,   991/991
(100 %)
27 diff
(97.3 %id)
AV751055 Pituitary .a 143 to 311 1 to 163       163/163
(100 %)
5 diff
(97.0 %id)
BC021964 Colon, adenocarcinoma .a 147 to 2533 1 to 2389 P97A G98R L99F S100E G101W ... available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2387/2389
(99 %)
4 diff
(99.9 %id)
CR735567 blood, natural killer cells, cell line .a 159 to 606 36 to 483       448/483
(92 %)
7 diff
(98.6 %id)
DB035716 testis .a 160 to 739 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
BM564392 blood, natural killer cells, cell line .a 161 to 832 1 to 675       675/1299
(51 %)
17 diff
(98.7 %id)
CR980074 T-Lymphocytes .a 162 to 1011 1 to 847       847/848
(99 %)
4 diff
(99.6 %id)
BE305081 adenocarcinoma cell line, colon .a 165 to 729 1 to 566   available from MGC,   564/567
(99 %)
4 diff
(99.3 %id)
BE249970 adenocarcinoma cell line, colon .a 166 to 995 1 to 828       829/964
(85 %)
43 diff
(95.6 %id)
BE293682 adenocarcinoma cell line, colon .a 166 to 747 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA917601 small intestine .a 169 to 754 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DB458302 testis .a 175 to 649 1 to 475       475/475
(100 %)
0 diff
(100 %id)
DA649132   .a 179 to 521 2 to 344   capped   343/343
(100 %)
0 diff
(100 %id)
DA042535 bladder .a 182 to 735 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
BC033787 Brain, adult medulla .a 190 to 1297 1 to 1108 G303R available from MGC, AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 1108/1108
(100 %)
1 diff
(100.0 %id)
BI827631 brain, medulla .a 190 to 964 1 to 773       773/773
(100 %)
7 diff
(99.1 %id)
TI_57171998   .a 190 to 964 71 to 843       773/843
(91 %)
11 diff
(98.7 %id)
DA878423 Prostate .a 194 to 758 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
TI_45209267   .a 195 to 768 83 to 656       574/656
(87 %)
5 diff
(99.3 %id)
TI_45212045   .a 195 to 650 116 to 571       456/571
(79 %)
5 diff
(99.2 %id)
TI_45213116   .a 195 to 956 119 to 880       762/945
(80 %)
16 diff
(98.4 %id)
BG824605 adenocarcinoma cell line, colon .a 198 to 862 1 to 677       677/911
(74 %)
26 diff
(97.2 %id)
BI596409 brain, hypothalamus .a 198 to 768 1 to 571       571/571
(100 %)
4 diff
(99.3 %id)
BI598496 brain, hypothalamus .a 198 to 650 1 to 453       453/453
(100 %)
4 diff
(99.2 %id)
BI598815 brain, hypothalamus .a 198 to 956 1 to 759       759/824
(92 %)
15 diff
(98.2 %id)
CR598899 Neuroblastoma Cot 10-normalized .a 205 to 2081 1 to 1877 exact     1877/1877
(100 %)
0 diff
(100 %id)
AL520264 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 205 to 1165 1 to 954   fully sequenced,   954/954
(100 %)
5 diff
(99.5 %id)
DB488208 hypothalamus .a 207 to 655 1 to 447       447/447
(100 %)
16 diff
(96.5 %id)
DB494994 hypothalamus .a 207 to 684 1 to 478       478/488
(97 %)
1 diff
(99.8 %id)
DB503942 hypothalamus .a 207 to 684 1 to 478       478/478
(100 %)
0 diff
(100 %id)
DB506157 hypothalamus .a 207 to 678 1 to 472       472/472
(100 %)
0 diff
(100 %id)
TI_1948091892   .a 216 to 714 139 to 637   fully sequenced,   499/637
(78 %)
6 diff
(99.1 %id)
TI_1948092042   .a 216 to 714 138 to 636   fully sequenced,   499/636
(78 %)
6 diff
(99.1 %id)
TI_1948092194   .a 216 to 1249 137 to 1176   fully sequenced,   1040/1176
(88 %)
58 diff
(95.1 %id)
TI_1948092343   .a 216 to 714 136 to 634   fully sequenced,   499/634
(78 %)
6 diff
(99.1 %id)
CV030688 mixed .a 217 to 808 1 to 592       592/592
(100 %)
0 diff
(100 %id)
BE217990 carcinoid, lung .a 256 to 852 1 to 597     Submitted on the opposite strand 597/597
(100 %)
2 diff
(99.7 %id)
AW016923   .a 257 to 756 1 to 500     Submitted on the opposite strand 500/500
(100 %)
1 diff
(99.8 %id)
CA406791 adipose .a 299 to 833 1 to 535       535/542
(98 %)
2 diff
(99.7 %id)
BE904205 epithelioid carcinoma, Pancreas .a 375 to 1083 1 to 706       706/823
(85 %)
23 diff
(97.3 %id)
DA922873 small intestine .a 393 to 959 3 to 569   capped   567/568
(99 %)
0 diff
(100 %id)
DB039358 testis .a 393 to 976 3 to 587   capped   585/586
(99 %)
1 diff
(99.9 %id)
BP203170 coronary artery .a 441 to 1016 1 to 576       576/576
(100 %)
4 diff
(99.4 %id)
BP321261 placenta .a 445 to 1028 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
AK226005   .a 467 to 1437 1 to 971       971/971
(100 %)
3 diff
(99.7 %id)
AL118494   .a 476 to 2534 1 to 2059   tiling clone,   2059/2059
(100 %)
0 diff
(100 %id)
AA079571   .a 476 to 684 9 to 217       209/226
(92 %)
7 diff
(97.0 %id)
CV570736 cornea, eye .a 483 to 1082 1 to 600       600/600
(100 %)
0 diff
(100 %id)
AL449514 testis .a 488 to 763 27 to 302       276/302
(91 %)
6 diff
(98.1 %id)
N39298 liver and spleen .a 516 to 1009 497 to 1       497/498
(99 %)
11 diff
(97.8 %id)
AL602047   .a 518 to 1050 1 to 534       534/534
(100 %)
5 diff
(99.1 %id)
AA047133 uterus .a 538 to 1012 1 to 476       476/476
(100 %)
1 diff
(99.8 %id)
BQ221640 large cell carcinoma, lung .a 548 to 1353 1 to 812       812/899
(90 %)
18 diff
(98.0 %id)
DA285985 corpus callosum .a 550 to 1042 2 to 495   capped   494/494
(100 %)
1 diff
(99.8 %id)
BP220510 colon .a 564 to 1143 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
TI_159681483   .a 566 to 1310 813 to 82   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 732/943
(77 %)
17 diff
(98.2 %id)
BP290707 lung .a 567 to 1088 1 to 522       522/581
(89 %)
11 diff
(98.2 %id)
AW449747   .a 570 to 958 1 to 390     Submitted on the opposite strand 390/427
(91 %)
9 diff
(97.9 %id)
DN990054 brain, whole brain .a 590 to 1101 9 to 521       517/521
(99 %)
6 diff
(98.9 %id)
TI_1948091893   .a 653 to 1265 737 to 125   fully sequenced,   613/737
(83 %)
0 diff
(100 %id)
TI_1948092043   .a 653 to 1265 739 to 127   fully sequenced,   613/739
(82 %)
0 diff
(100 %id)
TI_1948092195   .a 653 to 1265 739 to 127   fully sequenced,   613/739
(82 %)
0 diff
(100 %id)
TI_1948092344   .a 653 to 1265 736 to 124   fully sequenced,   613/736
(83 %)
0 diff
(100 %id)
BM907727 large cell carcinoma, lung .a 657 to 1531 1 to 884       884/1005
(87 %)
72 diff
(92.9 %id)
BE294639 muscle, rhabdomyosarcoma .a 662 to 1203 1 to 542       542/542
(100 %)
2 diff
(99.7 %id)
BE677509 dorsal root ganglia .a 674 to 1088 1 to 415     Submitted on the opposite strand 415/415
(100 %)
0 diff
(100 %id)
BQ924869 large cell carcinoma, lung .a 693 to 1063 1 to 377       377/1028
(36 %)
18 diff
(98.3 %id)
CD517812 White Matter .a 701 to 1449 26 to 779       754/967
(77 %)
19 diff
(98.1 %id)
BF770654 epid_tumor .a 729 to 1056 351 to 22     Submitted on the opposite strand 330/365
(90 %)
1 diff
(99.8 %id)
BF957600 nervous_normal .a 729 to 1234 43 to 548       507/593
(85 %)
7 diff
(98.9 %id)
BM771741 stomach .a 751 to 1041 1 to 286       286/286
(100 %)
5 diff
(98.3 %id)
BM771612 stomach .a 751 to 1437 1 to 687       687/687
(100 %)
0 diff
(100 %id)
BX499690 Liver .a 796 to 1410 1 to 616       616/616
(100 %)
3 diff
(99.6 %id)
AL449513 testis .a 805 to 1213 409 to 1       409/409
(100 %)
0 diff
(100 %id)
BE785443 large cell carcinoma, lung .a 831 to 1469 8 to 651       644/968
(66 %)
18 diff
(98.2 %id)
CD300508 testis .a 836 to 1631 13 to 813       801/869
(92 %)
26 diff
(97.1 %id)
BF744745 breast .a 838 to 1276 59 to 497       439/497
(88 %)
9 diff
(98.2 %id)
AA180113   .a 865 to 1350 1 to 500       500/500
(100 %)
23 diff
(95.4 %id)
CD107065 brain, Pituitary .a 876 to 1747 1 to 878       878/878
(100 %)
16 diff
(98.2 %id)
BU174419 melanotic melanoma, cell line, skin .a 894 to 1678 23 to 816   AAA   794/885
(89 %)
26 diff
(97.1 %id)
BU168271 melanotic melanoma, cell line, skin .a 898 to 1736 1 to 848       848/849
(99 %)
15 diff
(98.3 %id)
BQ888394 melanotic melanoma, cell line, skin .a 898 to 1572 1 to 680       680/886
(76 %)
10 diff
(98.9 %id)
BQ893174 melanotic melanoma, cell line, skin .a 898 to 1807 1 to 917       917/919
(99 %)
16 diff
(98.3 %id)
BQ879302 melanotic melanoma, cell line, skin .a 898 to 1712 1 to 822       822/824
(99 %)
21 diff
(97.5 %id)
BU177704 melanotic melanoma, cell line, skin .a 898 to 1712 1 to 825       825/931
(88 %)
19 diff
(98.0 %id)
BU185149 melanotic melanoma, cell line, skin .a 898 to 1771 1 to 884       884/935
(94 %)
17 diff
(98.2 %id)
BU168478 melanotic melanoma, cell line, skin .a 898 to 1726 1 to 843       843/902
(93 %)
38 diff
(95.8 %id)
BQ679131 melanotic melanoma, cell line, skin .a 898 to 1774 1 to 882       882/923
(95 %)
39 diff
(95.8 %id)
AB032988 brain .a 918 to 6140 1 to 5224   tiling clone, available from KIAA,   5224/5224
(100 %)
4 diff
(100.0 %id)
BX327141 Placenta Cot 25-normalized .a 933 to 1819 15 to 899       885/899
(98 %)
8 diff
(99.2 %id)
DW434529 Liver .a 997 to 1238 17 to 258       242/258
(93 %)
6 diff
(97.7 %id)
BU856849 adenocarcinoma, cell line, breast .a 1000 to 1873 1 to 879       879/936
(93 %)
9 diff
(99.1 %id)
AL079721 testis .a 1012 to 1617 1 to 606       606/606
(100 %)
0 diff
(100 %id)
DT217727 brain .a 1024 to 1700 1 to 676       676/676
(100 %)
1 diff
(99.9 %id)
AL530456 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 1032 to 2088 1057 to 1   fully sequenced,   1057/1057
(100 %)
15 diff
(98.6 %id)
BF031848 hypernephroma, Kidney .a 1034 to 1620 1 to 596       596/912
(65 %)
26 diff
(97.2 %id)
AL520210 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 1041 to 2085 1042 to 6       1037/1115
(93 %)
0 diff
(100 %id)
BX403303 Neuroblastoma Cot 10-normalized .a 1041 to 2069 1023 to 1       1023/1096
(93 %)
24 diff
(97.9 %id)
AL544094 placenta, Placenta Cot 25-normalized .a 1063 to 2073 1022 to 12       1011/1029
(98 %)
0 diff
(100 %id)
AL524256 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1074 to 2082 1006 to 1   fully sequenced,   1006/1006
(100 %)
29 diff
(97.2 %id)
AL581720 B cells (Ramos cell line), B cells from Burkitt lymphoma .a 1082 to 2076 988 to 1   fully sequenced,   988/988
(100 %)
6 diff
(99.4 %id)
BE085629 breast .a 1100 to 1302 207 to 5     Submitted on the opposite strand 203/207
(98 %)
0 diff
(100 %id)
AA457086   .a 1106 to 1564 1 to 459       459/459
(100 %)
4 diff
(99.2 %id)
AV721510 hypothalamus .a 1125 to 1646 1 to 518       518/534
(97 %)
5 diff
(99.1 %id)
AL520263 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 1135 to 2081 941 to 1   fully sequenced,   941/941
(100 %)
9 diff
(99.1 %id)
T72696 liver and spleen .a 1138 to 1520 8 to 402       395/458
(86 %)
16 diff
(96.6 %id)
M62109   .a 1144 to 1502 1 to 368       368/371
(99 %)
19 diff
(94.9 %id)
W04977 liver and spleen .a 1144 to 1564 1 to 431       431/436
(98 %)
14 diff
(96.8 %id)
BU567189 testis .a 1145 to 1376 1 to 232       232/313
(74 %)
1 diff
(99.7 %id)
BI002285 head_normal .a 1154 to 1569 1 to 420       420/421
(99 %)
16 diff
(96.2 %id)
BF971090 adrenal cortex carcinoma, cell line, adrenal gland .a 1171 to 2053 1 to 873       873/1120
(77 %)
45 diff
(96.0 %id)
AA216119   .a 1178 to 1592 1 to 416       416/416
(100 %)
5 diff
(98.8 %id)
BE179028 head_neck .a 1189 to 1303 115 to 4     Submitted on the opposite strand 112/124
(90 %)
0 diff
(100 %id)
H64036 liver and spleen .a 1189 to 1631 1 to 450       450/450
(100 %)
11 diff
(97.6 %id)
CV364539 head_neck .a 1192 to 1445 1 to 249       249/249
(100 %)
17 diff
(93.2 %id)
BF172352 blood .a 1194 to 1358 1 to 164       164/166
(98 %)
13 diff
(92.2 %id)
AV751441 Pituitary .a 1195 to 1781 65 to 632       568/683
(83 %)
66 diff
(90.4 %id)
CA415098 Chondrosarcoma Grade II, Left Pelvis .a 1197 to 1305 126 to 19   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 108/108
(100 %)
1 diff
(99.1 %id)
BI005052 head_normal .a 1215 to 1644 481 to 52       430/483
(89 %)
0 diff
(100 %id)
BU192653 eye, retinoblastoma .a 1231 to 1981 1 to 758       758/926
(81 %)
22 diff
(97.7 %id)
BE938752 testis_normal .a 1244 to 1697 1 to 453       453/453
(100 %)
8 diff
(98.3 %id)
BE938801 testis_normal .a 1257 to 1697 439 to 1       439/439
(100 %)
4 diff
(99.1 %id)
EH318015   .a 1262 to 1343 1 to 81       81/81
(100 %)
1 diff
(98.8 %id)
DA233462 brain .a 1270 to 1798 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
CN357344 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1276 to 1965 13 to 702       690/702
(98 %)
6 diff
(99.2 %id)
AA215303 germinal center B cell .a 1277 to 1718 1 to 442       442/442
(100 %)
7 diff
(98.5 %id)
AA291330 germinal center B cell .a 1279 to 1700 1 to 422       422/422
(100 %)
2 diff
(99.6 %id)
AA127928 uterus .a 1291 to 1721 1 to 432   fully sequenced,   432/432
(100 %)
6 diff
(98.7 %id)
TI_149281628   .a 1299 to 2100 858 to 63   AAA   796/800
(99 %)
17 diff
(97.9 %id)
BG105792 adrenal cortex carcinoma, cell line, adrenal gland .a 1302 to 2023 1 to 715       715/719
(99 %)
11 diff
(98.5 %id)
CB054170 brain, glioblastoma (pooled) .a 1311 to 1889 10 to 588     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 579/588
(98 %)
6 diff
(99.0 %id)
BQ221483 large cell carcinoma, lung .a 1312 to 2105 12 to 810       799/897
(89 %)
18 diff
(98.0 %id)
TI_151763945   .a 1312 to 2101 874 to 93   AAA   782/914
(85 %)
12 diff
(98.7 %id)
BQ269517 Pancreas, Purified pancreatic islet .a 1314 to 1931 1 to 618       618/618
(100 %)
2 diff
(99.7 %id)
R09464 liver and spleen .a 1315 to 1636 1 to 329       329/456
(72 %)
10 diff
(97.9 %id)
R01354 liver and spleen .a 1335 to 1632 1 to 299       299/425
(70 %)
2 diff
(99.6 %id)
R02445 liver and spleen .a 1335 to 1651 1 to 326       326/331
(98 %)
16 diff
(95.2 %id)
BU159025 large cell carcinoma, lung .a 1345 to 2101 1 to 758   AAA   758/758
(100 %)
5 diff
(99.4 %id)
AL562313 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1351 to 2503 1144 to 1       1144/1144
(100 %)
66 diff
(94.3 %id)
TI_159714909   .a 1351 to 2101 811 to 63   AAA   749/1029
(72 %)
6 diff
(99.5 %id)
BQ212913 melanotic melanoma, skin .a 1366 to 2101 1 to 736   AAA   736/736
(100 %)
2 diff
(99.8 %id)
BU178863 melanotic melanoma, skin .a 1367 to 1996 12 to 642   AAA   631/748
(84 %)
5 diff
(99.4 %id)
BQ683557 melanotic melanoma, cell line, skin .a 1375 to 2102 1 to 728   AAA   728/728
(100 %)
2 diff
(99.8 %id)
BU174539 melanotic melanoma, cell line, skin .a 1375 to 2101 1 to 727   AAA   727/727
(100 %)
1 diff
(99.9 %id)
CN478553 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1387 to 2101 732 to 19   AAA   714/714
(100 %)
2 diff
(99.8 %id)
BU175416 embryonal carcinoma, cell line, testis .a 1389 to 2288 1 to 913       913/914
(99 %)
26 diff
(97.2 %id)
BG576999 breast, mammary adenocarcinoma, cell line .a 1391 to 2058 1 to 669       669/669
(100 %)
1 diff
(99.9 %id)
BM932125 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1401 to 1760 1 to 361   fully sequenced,   361/361
(100 %)
0 diff
(100 %id)
BE767594 placenta_normal .a 1403 to 1931 1 to 528       528/528
(100 %)
12 diff
(97.8 %id)
BI257513 cervical carcinoma cell line, cervix .a 1407 to 2104 1 to 704       704/731
(96 %)
13 diff
(98.3 %id)
BE929366 placenta_normal .a 1413 to 1929 9 to 526       518/528
(98 %)
7 diff
(98.7 %id)
BE844112 testis_normal .a 1414 to 1942 1 to 526       526/526
(100 %)
9 diff
(98.3 %id)
BE844096 testis_normal .a 1417 to 1825 410 to 2       409/413
(99 %)
0 diff
(100 %id)
BE844098 testis_normal .a 1417 to 1826 412 to 1       412/415
(99 %)
7 diff
(98.4 %id)
BY997118   .a 1425 to 2025 20 to 620       601/620
(96 %)
6 diff
(99.1 %id)
BE698683 uterus_tumor .a 1427 to 1900 476 to 2       475/476
(99 %)
0 diff
(100 %id)
BE844081 testis_normal .a 1427 to 1904 482 to 5       478/482
(99 %)
0 diff
(100 %id)
BU158287 eye, retinoblastoma .a 1427 to 2101 1 to 676   AAA   676/676
(100 %)
3 diff
(99.6 %id)
CB322050 Human Lung Epithelial cells, lung .a 1432 to 2101 688 to 19   AAA   670/670
(100 %)
2 diff
(99.8 %id)
BQ016347 lung, Metastatic Chondrosarcoma .a 1434 to 2101 686 to 19   AAA   668/668
(100 %)
1 diff
(99.9 %id)
BQ005075 Chondrosarcoma, Left Pelvis .a 1444 to 2101 674 to 19   AAA   656/656
(100 %)
5 diff
(99.3 %id)
BQ356157 head_neck .a 1461 to 1706 248 to 2       247/248
(99 %)
0 diff
(100 %id)
BG564747 Liver .a 1462 to 2081 1 to 624       624/756
(82 %)
7 diff
(99.1 %id)
DA104434 cerebellum .a 1477 to 2035 2 to 560   capped   559/560
(99 %)
1 diff
(99.9 %id)
BF213486 bone marrow, from acute myelogenous leukemia .a 1478 to 1970 1 to 491       491/491
(100 %)
5 diff
(99.0 %id)
BF905476 marrow .a 1482 to 1811 333 to 4     Submitted on the opposite strand 330/333
(99 %)
0 diff
(100 %id)
BF989397 placenta_normal .a 1487 to 1890 21 to 424       404/439
(92 %)
3 diff
(99.4 %id)
BM930559 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1488 to 2103 1 to 616   AAA   616/616
(100 %)
1 diff
(99.9 %id)
H81116 liver and spleen .a 1490 to 1725 1 to 233       233/233
(100 %)
5 diff
(97.9 %id)
CA423195 cell lines, Chondrosarcoma .a 1493 to 2100 626 to 19   AAA   608/608
(100 %)
3 diff
(99.6 %id)
BG490019 large cell carcinoma, lung .a 1502 to 2209 1 to 709       709/983
(72 %)
10 diff
(99.0 %id)
BU679606 lung, Primary Lung Epithelial Cells .a 1503 to 2100 616 to 19   AAA   598/598
(100 %)
4 diff
(99.4 %id)
CF128756 Chondrosarcoma Lung Metastasis cell lines, lung .a 1505 to 2042 1 to 536       536/536
(100 %)
4 diff
(99.3 %id)
TI_154194920   .a 1505 to 2101 40 to 633   AAA   594/594
(100 %)
6 diff
(99.0 %id)
BQ291880 amnion_normal .a 1515 to 1931 19 to 417       399/417
(95 %)
6 diff
(98.6 %id)
T85578 liver and spleen .a 1536 to 1870 1 to 341   fully sequenced,   341/341
(100 %)
7 diff
(98.0 %id)
H62679 liver and spleen .a 1536 to 1917 1 to 380   fully sequenced,   380/380
(100 %)
7 diff
(98.2 %id)
DB364591   .a 1549 to 2101 554 to 1       554/554
(100 %)
18 diff
(96.8 %id)
BP397757 pancreatic islet .a 1552 to 2081 1 to 530     Submitted on the opposite strand 530/530
(100 %)
5 diff
(99.1 %id)
AA743601 germinal center B cell .a 1568 to 1770 1 to 202       202/202
(100 %)
7 diff
(96.6 %id)
TI_157604766   .a 1599 to 2101 611 to 109   AAA   503/503
(100 %)
11 diff
(97.9 %id)
BF685667 leiomyosarcoma cell line, uterus .a 1602 to 2216 1 to 624       624/1087
(57 %)
29 diff
(97.4 %id)
BF683930 leiomyosarcoma cell line, uterus .a 1602 to 2358 1 to 753       753/783
(96 %)
15 diff
(98.1 %id)
AI743556 pooled .a 1615 to 2091 488 to 11       478/488
(97 %)
0 diff
(100 %id)
BQ189180 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1621 to 2185 1 to 565   fully sequenced,   565/565
(100 %)
0 diff
(100 %id)
TI_151731450   .a 1632 to 2451 895 to 84   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 812/972
(83 %)
37 diff
(96.2 %id)
BE221664 malignant melanoma, metastatic to lymphnode, skin .a 1637 to 2101 465 to 1       465/465
(100 %)
0 diff
(100 %id)
AI870721 anaplastic oligodendroglioma, brain .a 1638 to 2101 464 to 1       464/464
(100 %)
8 diff
(98.3 %id)
DB523798 testis .a 1650 to 2105 1 to 456     Submitted on the opposite strand 456/457
(99 %)
1 diff
(99.8 %id)
AI570136 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 1651 to 2101 472 to 22   AAA   451/451
(100 %)
0 diff
(100 %id)
AL602197   .a 1653 to 2093 1 to 441       441/441
(100 %)
5 diff
(98.9 %id)
DB526514 testis .a 1660 to 2091 1 to 432     Submitted on the opposite strand 432/442
(97 %)
1 diff
(99.8 %id)
AI803686 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1662 to 2105 445 to 2       444/450
(98 %)
0 diff
(100 %id)
AV727425 hypothalamus .a 1665 to 2050 1 to 386       386/386
(100 %)
1 diff
(99.8 %id)
DB365673   .a 1672 to 2101 433 to 1       433/433
(100 %)
8 diff
(98.2 %id)
AI003827   .a 1673 to 2105 438 to 6       433/438
(98 %)
0 diff
(100 %id)
AI248819 liver and spleen .a 1674 to 2105 431 to 2       430/431
(99 %)
0 diff
(100 %id)
AI290357 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1674 to 2101 435 to 1       435/445
(97 %)
8 diff
(98.3 %id)
AW029398 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 1682 to 2107 427 to 2       426/427
(99 %)
0 diff
(100 %id)
AW905112 nervous_normal .a 1687 to 2021 345 to 11       335/345
(97 %)
0 diff
(100 %id)
DB508736 testis .a 1687 to 2106 1 to 419     Submitted on the opposite strand 419/419
(100 %)
14 diff
(96.7 %id)
AA127878 uterus .a 1691 to 2101 413 to 1   fully sequenced,   413/413
(100 %)
1 diff
(99.8 %id)
DB562470 hypothalamus .a 1692 to 2101 1 to 410     Submitted on the opposite strand 410/410
(100 %)
0 diff
(100 %id)
TI_149305397   .a 1699 to 2527 912 to 88   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 825/946
(87 %)
14 diff
(98.6 %id)
T72626 liver and spleen .a 1702 to 2101 410 to 2       409/412
(99 %)
1 diff
(99.8 %id)
AA700594 liver and spleen .a 1702 to 2091 400 to 11       390/400
(97 %)
0 diff
(100 %id)
AA079523   .a 1702 to 2105 412 to 1       412/488
(84 %)
7 diff
(98.6 %id)
AA047272 uterus .a 1706 to 2101 396 to 1       396/396
(100 %)
1 diff
(99.8 %id)
BU607976 Human Lung Epithelial cells, lung .a 1711 to 2101 409 to 19   AAA   391/400
(97 %)
1 diff
(99.8 %id)
FN145286 breast carcinoma .a 1714 to 1807 94 to 1     Submitted on the opposite strand 94/95
(98 %)
0 diff
(100 %id)
AA807238 germinal center B cell .a 1725 to 2105 386 to 6       381/386
(98 %)
0 diff
(100 %id)
AI276562 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1728 to 2101 374 to 1       374/374
(100 %)
1 diff
(99.8 %id)
AI240447 follicular lymphoma, lymph node .a 1728 to 2102 375 to 1       375/375
(100 %)
0 diff
(100 %id)
AI742733 pooled .a 1728 to 2105 380 to 3       378/380
(99 %)
0 diff
(100 %id)
BM685129 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1730 to 2101 390 to 19   fully sequenced, AAA   372/372
(100 %)
0 diff
(100 %id)
AA364966 pineal body .a 1737 to 2089 1 to 353       353/353
(100 %)
4 diff
(98.9 %id)
AW953944   .a 1743 to 2330 1 to 598       598/649
(92 %)
24 diff
(96.4 %id)
AW959876   .a 1743 to 2330 1 to 588       588/597
(98 %)
1 diff
(99.9 %id)
AA976219 carcinoid, lung .a 1746 to 2101 356 to 1       356/356
(100 %)
0 diff
(100 %id)
AU252577 neuroblastoma .a 1763 to 2448 699 to 17       683/700
(97 %)
0 diff
(100 %id)
BQ355954 head_neck .a 1767 to 2322 1 to 556       556/556
(100 %)
8 diff
(98.6 %id)
BQ355965 head_neck .a 1767 to 2322 1 to 556       556/556
(100 %)
8 diff
(98.6 %id)
AI582575 adenocarcinoma, Pancreas .a 1770 to 2101 347 to 16   AAA   332/332
(100 %)
1 diff
(99.7 %id)
BQ019661 Chondrosarcoma, Left Pubic Bone .a 1779 to 2448 692 to 22   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 671/674
(99 %)
0 diff
(100 %id)
BE293852 adenocarcinoma cell line, colon .a 1788 to 2471 694 to 2       693/718
(96 %)
0 diff
(100 %id)
N75953 liver and spleen .a 1795 to 2101 309 to 3       307/309
(99 %)
0 diff
(100 %id)
AA568896 colon, colon tumor RER+ .a 1812 to 2101 290 to 1       290/290
(100 %)
0 diff
(100 %id)
CD299414 Blood vessels - aorta, basilar and artery .a 1817 to 2101 1 to 285   AAA   285/285
(100 %)
3 diff
(99.0 %id)
BE293807 adenocarcinoma cell line, colon .a 1837 to 2460 631 to 1   available from MGC,   631/696
(90 %)
19 diff
(97.3 %id)
T85579 liver and spleen .a 1840 to 2101 297 to 22   fully sequenced, AAA   276/276
(100 %)
7 diff
(97.5 %id)
BU685755 lung, Primary Lung Epithelial Cells .a 1840 to 2527 706 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 688/688
(100 %)
1 diff
(99.9 %id)
DA093127 cerebellum .a 1842 to 2417 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
AW247114 lung, small cell carcinoma .a 1842 to 2101 270 to 11   AAA   260/263
(98 %)
5 diff
(98.1 %id)
TI_149291814   .a 1847 to 2539 788 to 104       685/788
(86 %)
0 diff
(100 %id)
AA583522   .a 1855 to 2270 1 to 416       416/416
(100 %)
4 diff
(99.1 %id)
BI859652 breast, mammary adenocarcinoma, cell line .a 1875 to 2451 1 to 573   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 573/573
(100 %)
7 diff
(98.8 %id)
TI_57188986   .a 1875 to 2451 60 to 632   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 573/573
(100 %)
7 diff
(98.8 %id)
H65310 liver and spleen .a 1887 to 2101 215 to 1   fully sequenced,   215/215
(100 %)
1 diff
(99.6 %id)
AA521197 germinal center B cell .a 1901 to 2460 560 to 1       560/560
(100 %)
8 diff
(98.6 %id)
BG036211 adenocarcinoma, cell line, Prostate .a 1903 to 2463 1 to 562       562/566
(99 %)
7 diff
(98.8 %id)
BI850620 adenocarcinoma, cell line, Prostate .a 1903 to 2451 1 to 549       549/549
(100 %)
1 diff
(99.9 %id)
BQ433758 large cell carcinoma, lung .a 1911 to 2448 24 to 561   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 538/564
(95 %)
10 diff
(98.3 %id)
AA469995   .a 1913 to 2457 1 to 545   fully sequenced,   545/545
(100 %)
0 diff
(100 %id)
EB361668 eye, lens .a 1916 to 2408 492 to 1       492/492
(100 %)
3 diff
(99.4 %id)
BU682215 lung .a 1921 to 2531 626 to 21   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 606/608
(99 %)
0 diff
(100 %id)
BQ286155 Pancreas, Purified pancreatic islet .a 1935 to 2462 528 to 1       528/528
(100 %)
1 diff
(99.9 %id)
BP397773 pancreatic islet .a 1950 to 2441 1 to 494     Submitted on the opposite strand 494/494
(100 %)
3 diff
(99.4 %id)
DB365333   .a 1961 to 2522 562 to 1       562/564
(99 %)
2 diff
(99.7 %id)
DB577473 hypothalamus .a 1962 to 2449 1 to 488     Submitted on the opposite strand 488/488
(100 %)
2 diff
(99.6 %id)
AW161788 brain, frontal lobe .a 1965 to 2458 494 to 1       494/494
(100 %)
0 diff
(100 %id)
AA262157 germinal center B cell .a 1969 to 2452 484 to 1       484/484
(100 %)
2 diff
(99.6 %id)
AA868256 parathyroid gland, parathyroid tumor .a 1974 to 2539 567 to 1       567/567
(100 %)
4 diff
(99.3 %id)
AA457223   .a 1975 to 2448 477 to 4       474/477
(99 %)
0 diff
(100 %id)
DB575188 hypothalamus .a 1977 to 2449 1 to 473     Submitted on the opposite strand 473/473
(100 %)
1 diff
(99.8 %id)
BM311846 Pancreas, Purified pancreatic islet .a 1986 to 2450 465 to 1       465/465
(100 %)
0 diff
(100 %id)
DB566038 hypothalamus .a 1987 to 2449 1 to 463     Submitted on the opposite strand 463/463
(100 %)
1 diff
(99.8 %id)
CB054169 brain, glioblastoma (pooled) .a 1993 to 2533 577 to 37   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 541/541
(100 %)
5 diff
(99.1 %id)
BQ267469 insulinoma, Pancreas .a 2001 to 2448 466 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 448/451
(99 %)
0 diff
(100 %id)
DB557660 hypothalamus .a 2008 to 2449 1 to 441     Submitted on the opposite strand 441/441
(100 %)
10 diff
(97.8 %id)
AI344558 2 pooled tumors (clear cell type), Kidney .a 2011 to 2454 444 to 1       444/444
(100 %)
1 diff
(99.8 %id)
BG656510 Pancreas, Purified pancreatic islet .a 2020 to 2451 432 to 1     Submitted on the opposite strand 432/432
(100 %)
0 diff
(100 %id)
BJ995719 hepatoblastoma .a 2020 to 2412 393 to 1       393/393
(100 %)
0 diff
(100 %id)
AI244162 Kidney .a 2021 to 2451 432 to 1       432/432
(100 %)
1 diff
(99.8 %id)
AI149633   .a 2028 to 2334 309 to 3       307/309
(99 %)
0 diff
(100 %id)
R01240 liver and spleen .a 2034 to 2434 413 to 1       413/418
(98 %)
17 diff
(96.0 %id)
AA180361   .a 2038 to 2448 417 to 4       414/418
(99 %)
0 diff
(100 %id)
AA737619 germinal center B cell .a 2038 to 2460 421 to 1       421/421
(100 %)
3 diff
(99.3 %id)
DB536540 hippocampus .a 2048 to 2451 1 to 404     Submitted on the opposite strand 404/404
(100 %)
2 diff
(99.6 %id)
AA765501 germinal center B cell .a 2064 to 2460 397 to 1       397/397
(100 %)
1 diff
(99.8 %id)
AI079176 brain, glioblastoma (pooled) .a 2064 to 2452 389 to 1       389/389
(100 %)
1 diff
(99.8 %id)
AA456977   .a 2082 to 2448 371 to 4       368/371
(99 %)
0 diff
(100 %id)
AA889237   .a 2083 to 2454 372 to 1       372/378
(98 %)
3 diff
(99.3 %id)
BG924709 cartilage .a 2084 to 2465 86 to 467       382/409
(93 %)
7 diff
(98.3 %id)
DB523043 testis .a 2084 to 2536 1 to 453     Submitted on the opposite strand 453/453
(100 %)
1 diff
(99.8 %id)
DB522630 testis .a 2088 to 2536 1 to 449     Submitted on the opposite strand 449/449
(100 %)
1 diff
(99.8 %id)
AI687488 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 2093 to 2451 359 to 1       359/359
(100 %)
0 diff
(100 %id)
DB218385 trachea .a 2097 to 2612 2 to 518   capped   517/517
(100 %)
3 diff
(99.5 %id)
AA844502 parathyroid gland, parathyroid tumor .a 2105 to 2539 436 to 1       436/436
(100 %)
4 diff
(99.1 %id)
AI470520 Kidney .a 2118 to 2451 334 to 1       334/334
(100 %)
0 diff
(100 %id)
BP397317 pancreatic islet .a 2119 to 2454 1 to 338     Submitted on the opposite strand 338/338
(100 %)
2 diff
(99.5 %id)
AA505352 breast .a 2119 to 2448 333 to 4       330/333
(99 %)
0 diff
(100 %id)
AA745255 germinal center B cell .a 2132 to 2459 329 to 2       328/329
(99 %)
0 diff
(100 %id)
AA909856 carcinoid, lung .a 2132 to 2448 319 to 3       317/319
(99 %)
0 diff
(100 %id)
AA214507 germinal center B cell .a 2133 to 2452 321 to 1       321/322
(99 %)
2 diff
(99.4 %id)
AI126932 heart .a 2142 to 2444 303 to 1       303/303
(100 %)
2 diff
(99.4 %id)
AI659054 Prostate .a 2144 to 2538 395 to 1       395/395
(100 %)
9 diff
(97.8 %id)
CK299359 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2155 to 2464 315 to 1   fully sequenced,   315/315
(100 %)
3 diff
(99.1 %id)
AW732052 lung, small cell carcinoma .a 2168 to 2534 370 to 4       367/370
(99 %)
0 diff
(100 %id)
AA412068   .a 2181 to 2455 275 to 1   fully sequenced,   275/275
(100 %)
0 diff
(100 %id)
AI301716 carcinoid, lung .a 2191 to 2528 338 to 1       338/338
(100 %)
1 diff
(99.8 %id)
DB519416 testis .a 2197 to 2600 1 to 409   AAA Submitted on the opposite strand 409/409
(100 %)
9 diff
(97.8 %id)
CD300418 testis .a 2202 to 3044 24 to 879       856/899
(95 %)
28 diff
(96.9 %id)
AA836515 germinal center B cell .a 2240 to 2460 221 to 1       221/221
(100 %)
0 diff
(100 %id)
DB501276 hypothalamus .a 2248 to 2736 1 to 489       489/489
(100 %)
3 diff
(99.4 %id)
H81117 liver and spleen .a 2269 to 2502 234 to 1       234/234
(100 %)
0 diff
(100 %id)
DA125310 cerebellum .a 2393 to 2895 2 to 506   capped   505/505
(100 %)
4 diff
(99.3 %id)
BQ081851 Ascites, stomach .a 2404 to 2533 1 to 126   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 126/126
(100 %)
5 diff
(96.1 %id)
BM751984 Ascites, stomach .a 2404 to 2533 1 to 129   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 129/129
(100 %)
2 diff
(98.5 %id)
BM752349 Ascites, stomach .a 2404 to 2533 1 to 130   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 130/130
(100 %)
2 diff
(98.5 %id)
BM759985 Ascites, stomach .a 2404 to 2533 1 to 129   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 129/129
(100 %)
2 diff
(98.5 %id)
BM760099 Ascites, stomach .a 2404 to 2533 1 to 130   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 130/130
(100 %)
1 diff
(99.3 %id)
BF591519 brain, glioblastoma (pooled) .a 2414 to 2531 118 to 1       118/118
(100 %)
2 diff
(98.4 %id)
DA046670 bladder .a 2478 to 3048 2 to 574   capped   573/573
(100 %)
3 diff
(99.5 %id)
DA236814 brain .a 2554 to 3068 2 to 516   capped   515/515
(100 %)
1 diff
(99.9 %id)
AL119821 amygdala .a 2593 to 3044 1 to 452     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 452/452
(100 %)
0 diff
(100 %id)
DA403887 thalamus .a 2596 to 3149 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
AW207536   .a 2798 to 3351 8 to 560     Submitted on the opposite strand 553/560
(98 %)
6 diff
(99.0 %id)
AW978607   .a 2818 to 3565 1 to 749       749/749
(100 %)
12 diff
(98.4 %id)
DB496726 hypothalamus .a 2861 to 3357 1 to 497       497/497
(100 %)
1 diff
(99.8 %id)
DB481827 hippocampus .a 2898 to 3326 1 to 429       429/429
(100 %)
2 diff
(99.6 %id)
BX460404 brain, fetal brain .a 2925 to 3816 1 to 890       890/890
(100 %)
3 diff
(99.7 %id)
AA721979 pineal gland .a 2954 to 3327 373 to 1       373/373
(100 %)
2 diff
(99.5 %id)
AA722163 pineal gland .a 2954 to 3327 374 to 1       374/374
(100 %)
4 diff
(99.0 %id)
AL691798   .a 3049 to 3466 1 to 418       418/418
(100 %)
3 diff
(99.3 %id)
DA366083 subthalamic nucleus .a 3071 to 3587 2 to 518   capped   517/517
(100 %)
1 diff
(99.9 %id)
AL691968   .a 3075 to 3600 19 to 544       526/544
(96 %)
6 diff
(98.9 %id)
BX505419   .a 3297 to 3939 1 to 642       642/642
(100 %)
1 diff
(99.9 %id)
CD358402 testis .a 3402 to 4270 1 to 886       886/891
(99 %)
31 diff
(96.6 %id)
BM475388 eye, retinoblastoma .a 3433 to 4454 1 to 1047       1047/1076
(97 %)
53 diff
(95.1 %id)
DA748666   .a 3547 to 4109 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
BM470083 lymph, lymphoma, cell line .a 3582 to 4470 1 to 907       907/1074
(84 %)
24 diff
(97.8 %id)
BQ226653 large cell carcinoma, lung .a 3613 to 4191 7 to 599       593/1025
(57 %)
36 diff
(96.5 %id)
DA745883   .a 3623 to 4196 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA140679 alzheimer cortex .a 3690 to 4235 2 to 548   capped   547/547
(100 %)
3 diff
(99.5 %id)
BX430987 brain, fetal brain .a 3698 to 4468 1 to 770       770/841
(91 %)
38 diff
(95.5 %id)
DB124562 thymus .a 3764 to 4335 2 to 574   capped   573/573
(100 %)
3 diff
(99.5 %id)
BQ581718 insulinoma, Pancreas .a 3767 to 4253 8 to 494       487/494
(98 %)
6 diff
(98.8 %id)
AI002389 carcinoid, lung .a 3781 to 4261 1 to 479     Submitted on the opposite strand 479/479
(100 %)
2 diff
(99.6 %id)
BX487637   .a 3860 to 4579 1 to 722       722/722
(100 %)
5 diff
(99.4 %id)
DB120740 thymus .a 3930 to 4480 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DB173522 kidney, tumor tissue .a 3933 to 4523 2 to 592   capped   591/591
(100 %)
2 diff
(99.7 %id)
BF310006 muscle, rhabdomyosarcoma .a 3965 to 4460 44 to 537       494/537
(91 %)
6 diff
(98.9 %id)
AJ711427 heart .a 4050 to 4194 8 to 151       144/151
(95 %)
6 diff
(96.1 %id)
AL119822 amygdala .a 4058 to 4430 393 to 21   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 373/374
(99 %)
0 diff
(100 %id)
H12183 whole brain .a 4067 to 4433 1 to 374     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 374/374
(100 %)
7 diff
(98.2 %id)
BF149118 skin .a 4068 to 4429 1 to 362       362/362
(100 %)
2 diff
(99.5 %id)
CN357345 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 4069 to 4584 1 to 516       516/516
(100 %)
1 diff
(99.9 %id)
BY795574 eye .a 4081 to 4430 1 to 350       350/350
(100 %)
1 diff
(99.8 %id)
BF968251 adrenal cortex carcinoma, cell line, adrenal gland .a 4095 to 4815 1 to 708       708/774
(91 %)
63 diff
(91.9 %id)
BQ217197 large cell carcinoma, lung .a 4117 to 5003 1 to 898       898/901
(99 %)
18 diff
(98.1 %id)
DA687383   .a 4124 to 4608 2 to 488   capped   487/487
(100 %)
4 diff
(99.2 %id)
DA942017 Spleen .a 4231 to 4814 2 to 585   tiling clone, capped   584/584
(100 %)
1 diff
(99.9 %id)
DA538157 Kidney .a 4281 to 4881 2 to 602   capped   601/601
(100 %)
2 diff
(99.7 %id)
CR740145   .a 4288 to 5019 1 to 733       733/733
(100 %)
4 diff
(99.5 %id)
H58382 liver and spleen .a 4288 to 4728 1 to 450       450/454
(99 %)
12 diff
(97.4 %id)
AA007515 liver and spleen .a 4289 to 4609 1 to 321       321/321
(100 %)
1 diff
(99.7 %id)
DA044488 bladder .a 4293 to 4862 2 to 571   capped   570/570
(100 %)
3 diff
(99.5 %id)
BQ717275 sympathetic trunk .a 4315 to 5216 1 to 918       918/919
(99 %)
31 diff
(96.7 %id)
DA268171 caudate nucleus .a 4339 to 4911 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
BE785631 large cell carcinoma, lung .a 4357 to 5054 1 to 682       682/843
(80 %)
44 diff
(94.8 %id)
BU663735 blood .a 4396 to 4989 18 to 609       592/609
(97 %)
6 diff
(99.1 %id)
BU579987 insulinoma, Pancreas .a 4473 to 5046 1 to 573       573/575
(99 %)
19 diff
(96.7 %id)
AV724896 hypothalamus .a 4559 to 4945 1 to 378       378/380
(99 %)
8 diff
(97.9 %id)
BM997822 lung, Lung Focal Fibrosis .a 4566 to 5066 10 to 510   AAA Submitted on the opposite strand 501/510
(98 %)
6 diff
(98.9 %id)
BU533400 mixed (pool of 40 RNAs) .a 4598 to 4954 1 to 357   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 357/358
(99 %)
2 diff
(99.5 %id)
BX487713   .a 4608 to 4907 352 to 651       488/651
(74 %)
14 diff
(97.9 %id)
AA344562 gall bladder .a 4641 to 4910 1 to 272       272/272
(100 %)
2 diff
(99.3 %id)
EC525512 Prostate .a 4651 to 4739 1 to 91       91/91
(100 %)
2 diff
(97.9 %id)
FN162696 breast carcinoma .a 4656 to 4742 1 to 87       87/92
(94 %)
1 diff
(99.0 %id)
AA453945   .a 4669 to 5094 1 to 426       426/426
(100 %)
2 diff
(99.6 %id)
DB491686 hypothalamus .a 4680 to 5081 1 to 403       403/403
(100 %)
11 diff
(97.3 %id)
DB501930 hypothalamus .a 4680 to 5150 1 to 472       472/472
(100 %)
1 diff
(99.8 %id)
AA846755 parathyroid gland, parathyroid tumor .a 4703 to 5099 401 to 5       397/401
(99 %)
0 diff
(100 %id)
CX783520 human embryonic stem cells .a 4762 to 5558 1 to 797       797/797
(100 %)
0 diff
(100 %id)
BG499975 adenocarcinoma, Prostate .a 4764 to 5375 1 to 615       615/615
(100 %)
4 diff
(99.4 %id)
BQ352017 head_neck .a 4769 to 5321 1 to 546       546/546
(100 %)
29 diff
(94.7 %id)
AW751021 colon .a 4774 to 5315 544 to 3       542/551
(98 %)
0 diff
(100 %id)
BE140309 head_neck .a 4774 to 5307 1 to 534       534/539
(99 %)
15 diff
(97.3 %id)
AW751099 colon .a 4780 to 5108 1 to 329       329/329
(100 %)
2 diff
(99.4 %id)
AA191206   .a 4780 to 5235 1 to 459       459/459
(100 %)
5 diff
(99.0 %id)
BE140357 head_neck .a 4788 to 5313 7 to 531       525/531
(98 %)
4 diff
(99.3 %id)
BE149422 head_neck .a 4789 to 5057 1 to 267       267/274
(97 %)
19 diff
(93.1 %id)
CD108424 brain, Pituitary .a 4801 to 5539 1 to 742       742/788
(94 %)
4 diff
(99.5 %id)
BG779626 adenocarcinoma, Prostate .a 4819 to 5500 1 to 679       679/679
(100 %)
4 diff
(99.5 %id)
BE162515 head_neck .a 4820 to 5330 523 to 21     Submitted on the opposite strand 503/523
(96 %)
22 diff
(95.8 %id)
BF670519 muscle (skeletal) .a 4825 to 5491 1 to 652       652/802
(81 %)
22 diff
(97.3 %id)
BQ677902 melanotic melanoma, cell line, skin .a 4834 to 5129 1 to 295       295/295
(100 %)
1 diff
(99.7 %id)
BE968480 heart .a 4837 to 5338 1 to 505       505/786
(64 %)
15 diff
(98.1 %id)
BX098016 placenta .a 4891 to 5633 1 to 743       743/743
(100 %)
1 diff
(99.9 %id)
R68945 placenta .a 4891 to 5264 1 to 376       376/376
(100 %)
2 diff
(99.5 %id)
EL954906 eyeball .a 4894 to 5219 20 to 345       326/345
(94 %)
6 diff
(98.3 %id)
W26226 eye, retina .a 4899 to 5396 12 to 520       509/557
(91 %)
26 diff
(95.4 %id)
AA481849.
matches multiple genes
ovarian tumor, ovary .a 4902 to 5343 1 to 441     also hits gene RAB40CandWFIKKN1 441/441
(100 %)
1 diff
(99.8 %id)
AA007516 liver and spleen .a 4903 to 5151 252 to 1       252/281
(89 %)
3 diff
(99.0 %id)
BM353034 Pancreas, Purified pancreatic islet .a 4910 to 5439 9 to 539       531/539
(98 %)
6 diff
(98.9 %id)
AA188243   .a 4913 to 5424 1 to 519       519/519
(100 %)
10 diff
(98.1 %id)
BF673837 Prostate .a 4945 to 5626 1 to 689       689/830
(83 %)
36 diff
(95.7 %id)
DT220612 brain .a 4948 to 5636 1 to 689       689/689
(100 %)
0 diff
(100 %id)
BM456693 lymph, lymphoma, cell line .a 4948 to 5486 1 to 545       545/1110
(49 %)
8 diff
(99.3 %id)
BE786669 large cell carcinoma, lung .a 5072 to 5814 1 to 743       743/761
(97 %)
17 diff
(97.8 %id)
AA036965 uterus .a 5110 to 5463 1 to 360       360/387
(93 %)
7 diff
(98.2 %id)
CD695616 normal nasopharynx .a 5112 to 5447 46 to 381       336/381
(88 %)
6 diff
(98.5 %id)
BQ574345 Chondrosarcoma Grade II, Left Pelvis .a 5125 to 5819 713 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 695/695
(100 %)
3 diff
(99.6 %id)
TI_149299488   .a 5157 to 6140 1061 to 88   AAA   974/1011
(96 %)
36 diff
(96.5 %id)
AA330417   .a 5175 to 5451 1 to 279       279/286
(97 %)
4 diff
(98.7 %id)
H45338 breast .a 5193 to 5389 1 to 197       197/197
(100 %)
1 diff
(99.5 %id)
H43741 breast .a 5193 to 5579 1 to 397       397/486
(81 %)
14 diff
(97.2 %id)
AA405313   .a 5194 to 5603 1 to 410       410/410
(100 %)
1 diff
(99.8 %id)
BE844205 testis_normal .a 5213 to 5532 1 to 321       321/321
(100 %)
3 diff
(99.1 %id)
AA431686   .a 5231 to 5634 1 to 404       404/404
(100 %)
3 diff
(99.3 %id)
BG027754 Bone, osteosarcoma, cell line .a 5244 to 5958 27 to 733       707/937
(75 %)
28 diff
(97.1 %id)
CD677286 eye, Trabecular meshwork .a 5265 to 5905 1 to 641       641/641
(100 %)
0 diff
(100 %id)
BM888077 eye .a 5268 to 5813 1 to 542       542/542
(100 %)
11 diff
(98.0 %id)
H13901 placenta .a 5271 to 5705 1 to 445       445/445
(100 %)
12 diff
(97.4 %id)
H04206 placenta .a 5271 to 5674 1 to 413       413/413
(100 %)
11 diff
(97.4 %id)
AI694207 carcinoid, lung .a 5281 to 5824 544 to 1       544/544
(100 %)
0 diff
(100 %id)
TI_154116781   .a 5321 to 6163 923 to 92   AAA   832/963
(86 %)
18 diff
(98.2 %id)
TI_154130144   .a 5330 to 5968 899 to 271       629/1049
(59 %)
0 diff
(100 %id)
AI831626 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 5346 to 5823 484 to 7       478/484
(98 %)
0 diff
(100 %id)
CB142038 Liver .a 5356 to 5887 1 to 532       532/532
(100 %)
1 diff
(99.9 %id)
TI_154015733   .a 5363 to 6140 861 to 95   AAA   767/964
(79 %)
17 diff
(98.3 %id)
BX413058 brain, fetal brain .a 5364 to 6136 781 to 1       781/877
(89 %)
47 diff
(94.7 %id)
TI_154103720   .a 5378 to 6140 841 to 90   AAA   752/789
(95 %)
41 diff
(94.9 %id)
DV459024 cochlea, ear .a 5390 to 5696 1 to 307       307/307
(100 %)
0 diff
(100 %id)
TI_154117723   .a 5428 to 6163 811 to 78   AAA   734/966
(75 %)
73 diff
(92.5 %id)
BQ045002 Knee, Osteoarthritic Cartilage .a 5429 to 6140 730 to 19   AAA   712/712
(100 %)
2 diff
(99.8 %id)
CB240805 Human Lung Epithelial cells, lung .a 5429 to 6169 759 to 19   AAA   741/741
(100 %)
2 diff
(99.8 %id)
BE844218 testis_normal .a 5450 to 5930 489 to 10       480/489
(98 %)
0 diff
(100 %id)
BM997991 lung, Metastatic Chondrosarcoma .a 5469 to 6140 690 to 19   AAA   672/672
(100 %)
0 diff
(100 %id)
CA437042 lung, Metastatic Chondrosarcoma .a 5473 to 6140 684 to 19   AAA   666/666
(100 %)
2 diff
(99.7 %id)
BQ447199 Knee, Osteoarthritic Cartilage .a 5479 to 6140 680 to 19   AAA   662/665
(99 %)
2 diff
(99.7 %id)
BM975810 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 5482 to 6140 677 to 19   AAA   659/659
(100 %)
0 diff
(100 %id)
BU619514 Cell Line, Chondrosarcoma .a 5482 to 6140 677 to 19   AAA   659/659
(100 %)
1 diff
(99.9 %id)
CN479592 Chondrosarcoma, Left Pubic Bone .a 5483 to 6140 676 to 19   AAA   658/658
(100 %)
0 diff
(100 %id)
CA312672 Human Lung Epithelial cells, lung .a 5484 to 6163 696 to 19   AAA   678/678
(100 %)
1 diff
(99.9 %id)
BE844200 testis_normal .a 5487 to 5900 1 to 413       413/413
(100 %)
8 diff
(98.1 %id)
AA453165   .a 5496 to 6064 573 to 4       570/573
(99 %)
0 diff
(100 %id)
BF131609 hypernephroma, Kidney .a 5502 to 5998 1 to 505       505/826
(61 %)
54 diff
(93.5 %id)
BE844214 testis_normal .a 5506 to 5893 16 to 403       388/403
(96 %)
6 diff
(98.6 %id)
AA877403 2 pooled tumors (clear cell type), Kidney .a 5506 to 5938 435 to 3       433/435
(99 %)
0 diff
(100 %id)
BQ188181 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5509 to 5889 1 to 380   fully sequenced,   380/380
(100 %)
2 diff
(99.5 %id)
AA352991   .a 5512 to 5809 1 to 300       300/300
(100 %)
2 diff
(99.4 %id)
BF572868 melanotic melanoma, high MDR, skin .a 5514 to 6144 1 to 626   AAA   626/626
(100 %)
29 diff
(95.4 %id)
BF691063 melanotic melanoma, high MDR, skin .a 5514 to 6137 1 to 632       632/662
(95 %)
40 diff
(94.0 %id)
AA864363 pooled germ cell tumors .a 5567 to 5796 249 to 20   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 230/230
(100 %)
0 diff
(100 %id)
DB551596 hippocampus .a 5580 to 6084 1 to 506     Submitted on the opposite strand 506/506
(100 %)
6 diff
(98.9 %id)
BM991957 Bone, Subchondral Bone .a 5581 to 6140 577 to 19   AAA   559/559
(100 %)
1 diff
(99.9 %id)
AA655009   .a 5586 to 5974 28 to 414       387/414
(93 %)
6 diff
(98.6 %id)
H11654 whole brain .a 5599 to 6065 490 to 11   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 480/483
(99 %)
21 diff
(95.7 %id)
AI827679 pooled .a 5601 to 6117 567 to 51       517/567
(91 %)
0 diff
(100 %id)
AI597942 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 5606 to 6140 535 to 1       535/535
(100 %)
0 diff
(100 %id)
BI858874 breast, mammary adenocarcinoma, cell line .a 5612 to 6148 1 to 537       537/778
(69 %)
6 diff
(99.3 %id)
TI_57191283   .a 5612 to 6148 91 to 627       537/778
(69 %)
6 diff
(99.3 %id)
BP395129 pancreatic islet .a 5616 to 6147 1 to 533     Submitted on the opposite strand 533/533
(100 %)
1 diff
(99.9 %id)
DB541566 hippocampus .a 5618 to 6084 1 to 467     Submitted on the opposite strand 467/467
(100 %)
4 diff
(99.2 %id)
GD156285   .a 5627 to 6140 1 to 514   AAA   514/514
(100 %)
4 diff
(99.3 %id)
AW188015 pooled .a 5633 to 6145 510 to 1       510/510
(100 %)
2 diff
(99.7 %id)
AW131344 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 5635 to 6140 506 to 1       506/506
(100 %)
0 diff
(100 %id)
DB572470 hypothalamus .a 5641 to 6120 1 to 480     Submitted on the opposite strand 480/482
(99 %)
1 diff
(99.8 %id)
BM352755 Pancreas, Purified pancreatic islet .a 5650 to 6148 500 to 2       499/500
(99 %)
0 diff
(100 %id)
AW044629 pooled .a 5650 to 6140 503 to 13   AAA   491/491
(100 %)
0 diff
(100 %id)
CA445931 Chondrosarcoma, Left Pelvis .a 5651 to 6140 508 to 19   AAA   490/490
(100 %)
0 diff
(100 %id)
AV726756 hypothalamus .a 5653 to 6140 1 to 488   AAA   488/488
(100 %)
1 diff
(99.8 %id)
AI127993 uterus .a 5658 to 6141 484 to 1       484/484
(100 %)
0 diff
(100 %id)
AA989288 carcinoid, lung .a 5666 to 6164 500 to 2       499/500
(99 %)
0 diff
(100 %id)
DB550665 hippocampus .a 5668 to 6163 1 to 496     Submitted on the opposite strand 496/496
(100 %)
1 diff
(99.8 %id)
DB573129 hypothalamus .a 5675 to 6140 1 to 466   AAA Submitted on the opposite strand 466/466
(100 %)
2 diff
(99.6 %id)
BQ581462 insulinoma, Pancreas .a 5678 to 6140 497 to 35   AAA   463/463
(100 %)
0 diff
(100 %id)
BM700975 eye, human retina .a 5680 to 6140 1 to 461       461/461
(100 %)
5 diff
(99.0 %id)
BM692004 eye, human retina .a 5680 to 6145 1 to 466       466/466
(100 %)
5 diff
(99.0 %id)
AI167809 parathyroid gland, parathyroid tumor .a 5684 to 6139 456 to 1       456/456
(100 %)
0 diff
(100 %id)
DB528039 testis .a 5689 to 6167 1 to 479     Submitted on the opposite strand 479/481
(99 %)
1 diff
(99.8 %id)
AA188839   .a 5698 to 6162 478 to 6       473/485
(97 %)
0 diff
(100 %id)
AA305896   .a 5700 to 6129 430 to 1     Submitted on the opposite strand 430/430
(100 %)
1 diff
(99.8 %id)
AI041097   .a 5700 to 6164 467 to 3       465/469
(99 %)
0 diff
(100 %id)
BU579735 insulinoma, Pancreas .a 5702 to 6103 412 to 12       401/412
(97 %)
0 diff
(100 %id)
AW900901 nervous_normal .a 5703 to 5989 1 to 286       286/286
(100 %)
8 diff
(97.3 %id)
AW974213   .a 5703 to 6139 438 to 1     Submitted on the opposite strand 438/438
(100 %)
17 diff
(96.2 %id)
DB567752 hypothalamus .a 5703 to 6163 1 to 461     Submitted on the opposite strand 461/461
(100 %)
0 diff
(100 %id)
BP395810 pancreatic islet .a 5706 to 6035 1 to 330     Submitted on the opposite strand 330/330
(100 %)
0 diff
(100 %id)
DB562357 hypothalamus .a 5708 to 6140 1 to 434   AAA Submitted on the opposite strand 434/434
(100 %)
6 diff
(98.7 %id)
AI160824 placenta .a 5708 to 6085 378 to 1       378/378
(100 %)
2 diff
(99.5 %id)
BI036881 nervous_tumor .a 5724 to 6146 9 to 435       427/435
(98 %)
23 diff
(94.8 %id)
AA861877   .a 5726 to 6077 357 to 6       352/358
(98 %)
0 diff
(100 %id)
BU186328 large cell carcinoma, lung .a 5740 to 6066 1 to 324       324/339
(95 %)
7 diff
(98.0 %id)
AW953548   .a 5753 to 6121 369 to 1     Submitted on the opposite strand 369/529
(69 %)
0 diff
(100 %id)
N51756 multiple sclerosis lesions .a 5754 to 6024 1 to 271     Submitted on the opposite strand 271/271
(100 %)
0 diff
(100 %id)
AA453440   .a 5754 to 6169 419 to 4       416/419
(99 %)
0 diff
(100 %id)
AA855040 parathyroid gland, parathyroid tumor .a 5754 to 6155 401 to 1       401/401
(100 %)
1 diff
(99.8 %id)
AI587514 adenocarcinoma, Pancreas .a 5755 to 6169 415 to 1       415/415
(100 %)
0 diff
(100 %id)
AI076451 liver and spleen .a 5756 to 6164 417 to 8       410/417
(98 %)
0 diff
(100 %id)
AA405350   .a 5757 to 6144 388 to 1       388/388
(100 %)
0 diff
(100 %id)
AA974088 pooled germ cell tumors .a 5766 to 6169 404 to 1       404/404
(100 %)
1 diff
(99.8 %id)
H04207 placenta .a 5771 to 6127 369 to 10       360/371
(97 %)
5 diff
(98.7 %id)
Z33442   .a 5776 to 6142 367 to 1       367/367
(100 %)
0 diff
(100 %id)
CD237448 Pituitary .a 5779 to 6141 1 to 362   AAA   362/362
(100 %)
7 diff
(98.1 %id)
AA903946 carcinoid, lung .a 5791 to 6146 356 to 1       356/356
(100 %)
1 diff
(99.8 %id)
AA923377 pooled .a 5791 to 6143 353 to 1       353/353
(100 %)
0 diff
(100 %id)
AA825311 germinal center B cell .a 5792 to 6140 373 to 25   AAA   349/349
(100 %)
1 diff
(99.8 %id)
D57665   .a 5795 to 6137 1 to 339       339/339
(100 %)
10 diff
(97.1 %id)
R40852.
matches multiple genes
whole brain .a 5795 to 6140 369 to 12   AAA also hits gene ARPP21 358/363
(98 %)
11 diff
(97.0 %id)
AA761680 germinal center B cell .a 5798 to 6140 353 to 11   AAA   343/343
(100 %)
2 diff
(99.5 %id)
D58112   .a 5814 to 6151 13 to 348       336/348
(96 %)
6 diff
(98.3 %id)
D61899   .a 5815 to 6044 1 to 230       230/230
(100 %)
3 diff
(98.7 %id)
D61904   .a 5815 to 6133 1 to 319       319/319
(100 %)
1 diff
(99.7 %id)
D61991   .a 5815 to 6139 1 to 320       320/320
(100 %)
6 diff
(98.2 %id)
D79365 aorta .a 5815 to 6058 1 to 247       247/247
(100 %)
3 diff
(98.8 %id)
D79380 aorta .a 5815 to 6140 1 to 325       325/325
(100 %)
1 diff
(99.7 %id)
AA887483 Kidney .a 5816 to 6139 324 to 1       324/324
(100 %)
0 diff
(100 %id)
AA036966 uterus .a 5823 to 6121 307 to 1       307/307
(100 %)
9 diff
(97.1 %id)
AA975213 Kidney .a 5825 to 6105 1 to 281     Submitted on the opposite strand 281/281
(100 %)
2 diff
(99.3 %id)
R68832 placenta .a 5827 to 6122 305 to 1       305/315
(96 %)
11 diff
(96.6 %id)
BF440004 pooled .a 5827 to 6140 324 to 11   AAA   314/314
(100 %)
0 diff
(100 %id)
AI248842 liver and spleen .a 5828 to 6162 341 to 7       335/341
(98 %)
0 diff
(100 %id)
AA773771   .a 5842 to 6122 280 to 1       280/280
(100 %)
8 diff
(97.2 %id)
BE467097 carcinoid, lung .a 5848 to 6169 322 to 1       322/322
(100 %)
0 diff
(100 %id)
AA865874 Kidney .a 5855 to 6059 205 to 1       205/205
(100 %)
1 diff
(99.6 %id)
CB243700 Human Lung Epithelial cells, lung .a 5856 to 6167 329 to 19   AAA   311/381
(81 %)
7 diff
(98.2 %id)
AW592162 pooled .a 5858 to 6145 288 to 1       288/288
(100 %)
0 diff
(100 %id)
BQ185344 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5859 to 6162 322 to 19   fully sequenced, AAA   304/304
(100 %)
2 diff
(99.4 %id)
AA649813 alveolar rhabdomyosarcoma .a 5863 to 6140 1 to 278   AAA   278/278
(100 %)
1 diff
(99.7 %id)
AA642834 alveolar rhabdomyosarcoma .a 5863 to 6140 1 to 278   AAA   278/278
(100 %)
3 diff
(99.0 %id)
N47004 multiple sclerosis lesions .a 5878 to 6121 1 to 244     Submitted on the opposite strand 244/244
(100 %)
0 diff
(100 %id)
AA722600 heart .a 5881 to 6140 260 to 1       260/260
(100 %)
3 diff
(98.9 %id)
AA579902 colon, colon tumor RER+ .a 5884 to 6141 258 to 1       258/258
(100 %)
0 diff
(100 %id)
AA431480   .a 5912 to 6169 262 to 4       259/262
(98 %)
0 diff
(100 %id)
EC482904 Prostate .a 5926 to 6028 1 to 102       102/102
(100 %)
1 diff
(99.1 %id)
D20526   .a 5991 to 6104 1 to 114     Submitted on the opposite strand 114/114
(100 %)
0 diff
(100 %id)
AW074757 colon, juvenile granulosa tumor .a 5997 to 6164 168 to 1       168/168
(100 %)
0 diff
(100 %id)
TI_44169262   .b 1 to 876 86 to 971 F59L G172W L173P M175Y L177S ...     886/975
(90 %)
29 diff
(97.1 %id)
BI549440 brain, hippocampus .b 5 to 876 1 to 882 F59L G172W L173P M175Y L177S ... tiling clone,   882/886
(99 %)
28 diff
(96.9 %id)
BI552412 brain, hippocampus .b 13 to 629 9 to 626   tiling clone,   618/626
(98 %)
7 diff
(98.9 %id)
DB457566 testis .c-u 1 to 457 1 to 457 exact tiling clone,   457/457
(100 %)
0 diff
(100 %id)
AI005473 pooled .d 1 to 402 419 to 18 exact tiling clone, AAA   402/402
(100 %)
0 diff
(100 %id)
DB039714 testis .e 1 to 565 2 to 567   tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
CA420238 Bone, Human Chondrosarcoma Cell Line .e 241 to 861 25 to 646 E72Q K73N E74R D75R L76S ... tiling clone, Submitted on the opposite strand 622/630
(98 %)
16 diff
(97.5 %id)
AL706238 human skeletal muscle .f-u 1 to 755 1 to 756 exact tiling clone,   756/756
(100 %)
2 diff
(99.8 %id)
DA201463 brain .g 1 to 578 2 to 579 exact tiling clone, capped   578/578
(100 %)
0 diff
(100 %id)
DB178901 kidney, tumor tissue .h 1 to 562 2 to 563   tiling clone, capped   562/562
(100 %)
7 diff
(98.8 %id)
AL709477 human skeletal muscle Gene TMX4, variant not shown              
AV693909 hepatocellular carcinoma Gene TMX4, variant not shown         Suspected internal deletion, this clone was ignored    
BQ187315 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene TMX4, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
CK300638 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene TMX4, variant not shown       fully sequenced, AAA Suspected internal deletion, this clone was ignored    
TI_151734291   Gene TMX4, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AV748508 Pituitary Gene TMX4, variant not shown         Suspected internal deletion, this clone was ignored    
BX494286 Liver Gene TMX4, variant not shown         This clone was ignored    
AV724398 hypothalamus Gene TMX4, variant not shown         Suspected internal deletion, this clone was ignored    
AL037004 brain Gene TMX4, variant not shown         Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base)    
AL037005 brain Gene TMX4, variant not shown       AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base)    
DB108371 thymus Gene TMX4, variant not shown       capped Suspected internal deletion, this clone was ignored    
CD238569 Pituitary Gene TMX4, variant not shown              
CD238588 Pituitary Gene TMX4, variant not shown              
DA148946 amygdala Gene TMX4, variant not shown       capped This clone was ignored    
AA205353   Gene TMX4, variant not shown         This clone was ignored    
AA207028   Gene TMX4, variant not shown         This clone was ignored    
AA206627   Gene TMX4, variant not shown         This clone was ignored    
AA206849   Gene TMX4, variant not shown         This clone was ignored    
AI828027 pooled Gene TMX4, variant not shown         Suspected internal deletion, this clone was ignored    
AW501198 lymph Gene TMX4, variant not shown         Suspected internal deletion, this clone was ignored    
DB063909 testis Gene TMX4, variant not shown       capped This clone was ignored    
DB339515 testis Gene TMX4, variant not shown         This clone was ignored    
TI_154155824   Gene TMX4, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d, .e, .f-u, .g, .h Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C