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Gene DHODHTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
114 supporting clones for gene DHODH back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BF347544 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1 to 293 1 to 295   tiling clone,   295/567
(52 %)
4 diff
(99.3 %id)
BQ070891 brain, neuroblastoma, cell line .a 1 to 840 1 to 844       844/1002
(84 %)
24 diff
(97.7 %id)
CR593960 Placenta Cot 25-normalized .a 147 to 1613 1 to 1466   tiling clone,   1466/1466
(100 %)
2 diff
(99.9 %id)
AK292293 testis .b 1 to 1492 2 to 1493 K7Q tiling clone,   1493/1493
(100 %)
1 diff
(100.0 %id)
DB032408 testis .b 1 to 570 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
NM_001361.3   .b 156 to 2220 1 to 2065 exact RefSeq, AAA Possibly primed on the genome, locally A rich (27/29 A in genome downstream of last aligned base) 2065/2065
(100 %)
0 diff
(100 %id)
AU130529   .b 157 to 761 2 to 607   capped   606/606
(100 %)
3 diff
(99.6 %id)
DA006065   .b 159 to 570 2 to 415   capped   414/414
(100 %)
3 diff
(99.3 %id)
DA215675 brain .b 159 to 663 2 to 511   capped   510/510
(100 %)
5 diff
(99.1 %id)
BP196568 adrenal gland .b 162 to 749 1 to 587       587/587
(100 %)
3 diff
(99.5 %id)
BP282300 bone marrow .b 162 to 742 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
BM834479 stomach .b 162 to 723 1 to 562       562/562
(100 %)
2 diff
(99.7 %id)
BP362226 thalamus .b 162 to 741 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
AU077301   .b 162 to 226 1 to 65       65/65
(100 %)
1 diff
(98.5 %id)
AU100282   .b 162 to 461 1 to 300       300/300
(100 %)
1 diff
(99.7 %id)
DA131963 alzheimer cortex .b 163 to 729 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA138361 alzheimer cortex .b 163 to 726 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA143486 alzheimer cortex .b 163 to 715 2 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
DA177314 amygdala .b 163 to 538 2 to 377   capped   376/376
(100 %)
1 diff
(99.8 %id)
DA321695 hippocampus .b 163 to 692 2 to 531   capped   530/530
(100 %)
1 diff
(99.9 %id)
DA365585 subthalamic nucleus .b 163 to 670 2 to 510   capped   509/509
(100 %)
2 diff
(99.7 %id)
DA543489   .b 163 to 721 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA894285 skeletal muscle .b 163 to 663 2 to 502   capped   501/501
(100 %)
1 diff
(99.9 %id)
BP380955   .b 163 to 883 1 to 726       726/790
(91 %)
24 diff
(97.0 %id)
CF780800 Pooled Chondrosarcoma Tumor cells .b 170 to 919 1 to 745       745/890
(83 %)
11 diff
(98.8 %id)
BI253747 cervical carcinoma cell line, cervix .b 172 to 933 1 to 766       766/774
(98 %)
9 diff
(98.9 %id)
CX762863 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 173 to 896 1 to 723     Submitted on the opposite strand 723/723
(100 %)
2 diff
(99.8 %id)
CF141384 CNCAP(3)T-225 cell line, Prostate .b 174 to 662 1 to 489       489/489
(100 %)
5 diff
(99.0 %id)
M94065   .b 174 to 1670 1 to 1496 A2P K7Q     1496/1496
(100 %)
9 diff
(99.4 %id)
CN255494 embryonic stem cells, cell lines H1, H7, andH9 .b 175 to 830 1 to 656       656/656
(100 %)
1 diff
(99.9 %id)
BQ232139 melanotic melanoma, skin .b 175 to 882 11 to 725       715/902
(79 %)
21 diff
(97.7 %id)
BC065245 Skin, melanotic melanoma. .b 176 to 2220 1 to 2045 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (27/29 A in genome downstream of last aligned base) 2045/2045
(100 %)
2 diff
(100.0 %id)
BU150925 brain, neuroblastoma, cell line .b 178 to 786 1 to 611       611/811
(75 %)
6 diff
(99.3 %id)
BU176732 eye, retinoblastoma .b 179 to 888 24 to 735       712/909
(78 %)
16 diff
(98.3 %id)
TI_154172145   .b 179 to 839 88 to 748       661/1135
(58 %)
14 diff
(98.8 %id)
CX757209 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 180 to 723 1 to 544     Submitted on the opposite strand 544/760
(71 %)
17 diff
(97.8 %id)
BF314188 brain, neuroblastoma .b 181 to 807 1 to 621       621/621
(100 %)
13 diff
(98.0 %id)
BI197931 brain, neuroblastoma .b 181 to 955 1 to 774       774/783
(98 %)
29 diff
(96.3 %id)
CB121224 Liver .b 186 to 652 1 to 467       467/467
(100 %)
0 diff
(100 %id)
BG024665 lymph, lymphoma, cell line .b 188 to 954 1 to 757       759/947
(80 %)
20 diff
(97.9 %id)
BM465205 eye, retinoblastoma .b 191 to 853 1 to 673       673/1072
(62 %)
23 diff
(97.9 %id)
AW366639 head_neck .b 193 to 426 11 to 245       235/245
(95 %)
6 diff
(97.6 %id)
AL547598 placenta, Placenta Cot 25-normalized .b 193 to 912 1 to 720   fully sequenced,   720/720
(100 %)
1 diff
(99.9 %id)
AA173122   .b 193 to 600 6 to 414       409/414
(98 %)
5 diff
(98.8 %id)
BM793484 Ascites, stomach .b 193 to 827 8 to 638       635/638
(99 %)
8 diff
(98.8 %id)
BQ083223 Ascites, stomach .b 193 to 377 7 to 191       185/191
(96 %)
6 diff
(96.9 %id)
DB030704 testis .b 193 to 783 8 to 598   capped   591/597
(98 %)
6 diff
(99.0 %id)
BE312892 brain, neuroblastoma .b 198 to 971 1 to 767       767/856
(89 %)
18 diff
(97.9 %id)
BQ919039 large cell carcinoma, lung .b 200 to 987 43 to 837       795/1006
(79 %)
31 diff
(97.0 %id)
TI_57237183   .b 204 to 881 64 to 783   AAA   692/1007
(68 %)
48 diff
(95.3 %id)
BU553197 ovary, teratocarcinoma, cell line .b 208 to 853 69 to 722       654/1109
(58 %)
24 diff
(97.9 %id)
BU845147 ovary, teratocarcinoma, cell line .b 209 to 1005 1 to 798       798/867
(92 %)
7 diff
(99.2 %id)
BU859158 ovary, teratocarcinoma, cell line .b 209 to 1118 1 to 925       925/926
(99 %)
21 diff
(97.8 %id)
CN255497 embryonic stem cells, DMSO-treated H9 cellline .b 213 to 655 1 to 443       443/443
(100 %)
0 diff
(100 %id)
CN255495 embryonic stem cells, DMSO-treated H9 cellline .b 240 to 635 1 to 396       396/396
(100 %)
0 diff
(100 %id)
CN255496 embryonic stem cells, cell lines H1, H7, andH9 .b 262 to 865 1 to 605       605/605
(100 %)
9 diff
(98.6 %id)
AW006026 anaplastic oligodendroglioma, brain .b 489 to 1027 623 to 87       537/623
(86 %)
4 diff
(99.4 %id)
BG479315 choriocarcinoma, placenta .b 570 to 1267 1 to 698       698/698
(100 %)
5 diff
(99.3 %id)
BE902847 choriocarcinoma, placenta .b 590 to 1024 1 to 438       438/439
(99 %)
4 diff
(99.1 %id)
T28623 gallbladder .b 619 to 811 1 to 193       193/193
(100 %)
2 diff
(99.0 %id)
DA131051 alzheimer cortex .b 640 to 1196 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
CN255498 embryonic stem cells, DMSO-treated H9 cellline .b 759 to 1222 1 to 464       464/464
(100 %)
0 diff
(100 %id)
BQ689300 ductal carcinoma, cell line, Pancreas .b 773 to 1623 1 to 869       869/872
(99 %)
27 diff
(97.0 %id)
AL572486 placenta, Placenta Cot 25-normalized .b 851 to 1659 807 to 1   fully sequenced,   807/807
(100 %)
12 diff
(98.6 %id)
BM756358 Ascites, stomach .b 1001 to 1549 9 to 557       549/557
(98 %)
7 diff
(98.8 %id)
BM770899 Ascites, stomach .b 1001 to 1508 9 to 516       508/516
(98 %)
7 diff
(98.7 %id)
AI491891 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 1002 to 1671 672 to 4       669/682
(98 %)
14 diff
(98.0 %id)
AA173225   .b 1081 to 1674 595 to 3       593/596
(99 %)
7 diff
(98.9 %id)
DB330964 skeletal muscle .b 1132 to 1673 543 to 1       543/543
(100 %)
1 diff
(99.9 %id)
BU069561 insulinoma, Pancreas .b 1140 to 1663 8 to 531       524/531
(98 %)
0 diff
(100 %id)
AI758501 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 1310 to 1669 369 to 9       361/403
(89 %)
0 diff
(100 %id)
BF844890 head_neck .b 1355 to 1573 23 to 241       219/241
(90 %)
6 diff
(97.6 %id)
AW886626 ovary .b 1384 to 1607 1 to 224       224/227
(98 %)
3 diff
(98.7 %id)
BG284967 adenocarcinoma, cell line, Prostate .b 1405 to 2216 1 to 805       805/911
(88 %)
15 diff
(98.4 %id)
AW087450 colon, moderately differentiated adenocarcinoma .b 1465 to 1670 239 to 33   AAA Possibly primed on the genome, locally A rich (27/29 A in genome downstream of last aligned base) 207/207
(100 %)
8 diff
(96.2 %id)
FN072643 breast carcinoma .b 1558 to 1665 1 to 109       109/113
(96 %)
2 diff
(98.3 %id)
BM559320 eye, retinoblastoma .b 1652 to 2213 1 to 562   AAA Possibly primed on the genome, locally A rich (27/29 A in genome downstream of last aligned base) 562/562
(100 %)
7 diff
(98.8 %id)
BE789211 large cell carcinoma, lung .b 1666 to 2403 1 to 738   tiling clone,   738/742
(99 %)
16 diff
(97.9 %id)
BM673367 eye, eye anterior segment .b 2045 to 2196 176 to 25   AAA   152/158
(96 %)
0 diff
(100 %id)
AU152444   .b 2046 to 2581 537 to 1   tiling clone,   537/537
(100 %)
19 diff
(96.5 %id)
BX115468 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 2137 to 2581 459 to 15   AAA Possibly primed on the genome, locally A rich (27/29 A in genome downstream of last aligned base) 445/448
(99 %)
3 diff
(99.4 %id)
AI499306 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 2152 to 2581 442 to 13   AAA Possibly primed on the genome, locally A rich (27/29 A in genome downstream of last aligned base) 430/430
(100 %)
2 diff
(99.6 %id)
AA905148 pooled .b 2427 to 2565 139 to 1       139/139
(100 %)
1 diff
(99.3 %id)
DB048866 testis .c 1 to 566 2 to 571   tiling clone, capped   570/570
(100 %)
6 diff
(99.0 %id)
DA719556   .c 5 to 578 2 to 576   tiling clone, capped   575/575
(100 %)
5 diff
(99.2 %id)
AL525247 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .c 17 to 762 1 to 746   tiling clone,   746/827
(90 %)
7 diff
(99.2 %id)
AL525420 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .c 879 to 1775 892 to 1   tiling clone,   892/908
(98 %)
81 diff
(91.1 %id)
DB280284 uterus .d 1 to 543 2 to 544   tiling clone, capped   543/543
(100 %)
2 diff
(99.7 %id)
BM854073 Ascites, stomach .d 25 to 631 1 to 607   tiling clone,   607/607
(100 %)
1 diff
(99.9 %id)
DA274317 corpus callosum .e 1 to 577 2 to 578 K7Q tiling clone, capped   577/577
(100 %)
1 diff
(99.9 %id)
BM472821 duodenal adenocarcinoma, cell line, small intestine .f 1 to 785 12 to 800 exact tiling clone,   789/998
(79 %)
12 diff
(98.8 %id)
AK097300 Spleen .g 1 to 2163 2 to 2164 G108R A111V tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (27/29 A in genome downstream of last aligned base) 2164/2164
(100 %)
6 diff
(99.8 %id)
DA952819 Spleen .g 1 to 556 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
AA362946 ovary .g 555 to 677 123 to 1   tiling clone, Submitted on the opposite strand 123/123
(100 %)
1 diff
(99.2 %id)
DB333855 Spleen .g 1616 to 2163 548 to 1       548/548
(100 %)
2 diff
(99.7 %id)
BF434819 Kidney .h 1 to 453 453 to 1 G29V V36G tiling clone,   453/453
(100 %)
2 diff
(99.6 %id)
DA196571 amygdala .i 1 to 567 2 to 569 Q16S E17G G18R N19K R21* tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
BM795077 Ascites, stomach .j 1 to 427 1 to 427 R64I Q97H Q99H E104* tiling clone,   427/427
(100 %)
6 diff
(98.6 %id)
CK431064 eye, lacrimal gland .k 1 to 616 1 to 616 K7Q tiling clone,   616/616
(100 %)
1 diff
(99.9 %id)
TI_57171018   .k 17 to 725 28 to 735   tiling clone,   708/735
(96 %)
7 diff
(99.1 %id)
BI830262 brain, medulla .k 18 to 725 1 to 707       707/707
(100 %)
4 diff
(99.5 %id)
BJ994280 hepatoblastoma .k 385 to 726 1 to 342       342/432
(79 %)
2 diff
(99.6 %id)
CA314529 Human Lung Epithelial cells, lung .k 514 to 1181 686 to 19   tiling clone, AAA   668/668
(100 %)
1 diff
(99.9 %id)
AJ709815 heart .k 928 to 1415 1 to 488       488/488
(100 %)
2 diff
(99.6 %id)
AA402362   .k 1146 to 1440 1 to 295   fully sequenced,   295/295
(100 %)
0 diff
(100 %id)
BJ994281 hepatoblastoma .k 1148 to 1562 415 to 1   tiling clone,   415/415
(100 %)
0 diff
(100 %id)
DW418731 Liver .k 1209 to 1586 16 to 393   AAA Possibly primed on the genome, locally A rich (27/29 A in genome downstream of last aligned base) 378/395
(95 %)
4 diff
(99.0 %id)
AA412074   .k 1410 to 1591 182 to 1   tiling clone, fully sequenced,   182/182
(100 %)
0 diff
(100 %id)
CD700089 normal nasopharynx .l 1 to 440 48 to 486 exact tiling clone,   445/486
(91 %)
6 diff
(98.8 %id)
DB188677 liver, tumor tissue .m 1 to 541 2 to 542 exact tiling clone, capped   541/541
(100 %)
2 diff
(99.7 %id)
DB187095 liver, tumor tissue .n 1 to 548 2 to 549 exact tiling clone, capped   548/548
(100 %)
1 diff
(99.9 %id)
TI_57165510   .o 1 to 784 21 to 811 K7Q F112L F114L I158T tiling clone,   791/811
(97 %)
29 diff
(96.5 %id)
BI837425 pooled pancreas and spleen .o 3 to 700 1 to 699   tiling clone,   699/789
(88 %)
15 diff
(98.1 %id)
BQ880089 dorsal root ganglia .o 779 to 1545 1 to 771   tiling clone,   771/960
(80 %)
24 diff
(97.5 %id)
DB310245 substantia nigra .o 993 to 1533 1 to 543     Submitted on the opposite strand 543/543
(100 %)
3 diff
(99.5 %id)
BM687365 eye, optic nerve .o 1383 to 1835 9 to 461   tiling clone, Possibly primed on the genome, locally A rich (27/29 A in genome downstream of last aligned base) 453/461
(98 %)
6 diff
(98.7 %id)
BM672503 eye, optic nerve .o 1995 to 2358 382 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (27/29 A in genome downstream of last aligned base) 364/367
(99 %)
0 diff
(100 %id)
BQ216447 embryonal carcinoma, cell line, testis .p 1 to 825 9 to 837 exact tiling clone,   837/852
(98 %)
18 diff
(97.9 %id)
BQ429860 testis .q-u 1 to 626 1 to 630 M17W D18I L19* tiling clone,   630/811
(77 %)
38 diff
(95.4 %id)
AK098239.
matches multiple genes
uterus Gene warru, variant not shown       available from FLJ, This clone was ignored, also hits gene warru    
AK098239.
matches multiple genes
uterus Gene DHODH, variant not shown       available from FLJ, This clone was ignored, also hits gene warru    
BG332681 large cell carcinoma, lung Gene DHODH, variant not shown         Suspected internal deletion, this clone was ignored    
CR976581.
matches multiple genes
T-Lymphocytes Gene warru, variant not shown         This clone was ignored, also hits gene warru    
CR976581.
matches multiple genes
T-Lymphocytes Gene DHODH, variant not shown         This clone was ignored, also hits gene warru    
DB251862.
matches multiple genes
uterus Gene warru, variant not shown       capped This clone was ignored, also hits gene warru    
DB251862.
matches multiple genes
uterus Gene DHODH, variant not shown       capped This clone was ignored, also hits gene warru    
DB351149.
matches multiple genes
uterus Gene warru, variant not shown         This clone was ignored, also hits gene warru    
DB351149.
matches multiple genes
uterus Gene DHODH, variant not shown         This clone was ignored, also hits gene warru    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC