To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene DHFRTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
481 supporting clones for gene DHFR back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DN995383 breast cancer, Mammary gland (cancer tissue) .a -11 to 651 1 to 663   tiling clone,   663/664
(99 %)
10 diff
(98.5 %id)
TI_44170173   .a -10 to 795 86 to 923       631/926
(68 %)
37 diff
(96.1 %id)
CB961213 Human Placenta, placenta .a 1 to 708 35 to 756       729/791
(92 %)
22 diff
(97.3 %id)
CB988944 Human Placenta, placenta .a 1 to 718 35 to 757   tiling clone,   730/797
(91 %)
13 diff
(98.4 %id)
NM_000791.3   .a 1 to 3912 6 to 3917 exact RefSeq, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 3917/3917
(100 %)
0 diff
(100 %id)
DB505023 hypothalamus .a 4 to 486 1 to 483       483/483
(100 %)
4 diff
(99.2 %id)
DB505274 hypothalamus .a 4 to 460 1 to 457       457/457
(100 %)
3 diff
(99.4 %id)
DB461838 testis .a 13 to 492 1 to 481       481/481
(100 %)
4 diff
(99.2 %id)
DB472065 hippocampus .a 13 to 508 1 to 496       496/496
(100 %)
1 diff
(99.8 %id)
CN312016 embryonic stem cells, cell lines H1, H7, andH9 .a 28 to 211 1 to 184       184/184
(100 %)
0 diff
(100 %id)
ES313557 beard hair, skin .a 63 to 189 1 to 127       127/127
(100 %)
16 diff
(87.5 %id)
BC003584 Eye, retinoblastoma .a 90 to 1147 58 to 1114 G16A G17A A21P A22G A23S ... available from MGC, AAA   1114/1114
(100 %)
7 diff
(99.4 %id)
BC071996 Eye, retinoblastoma .a 90 to 1147 58 to 1114 G16A G17A A21P A22G A23S ... available from MGC, AAA   1114/1114
(100 %)
7 diff
(99.4 %id)
DA244007 brain .a 90 to 604 83 to 596   capped   595/595
(100 %)
7 diff
(98.9 %id)
DB483130 hippocampus .a 90 to 527 54 to 490       490/490
(100 %)
8 diff
(98.4 %id)
BG396037 eye, retinoblastoma .a 90 to 647 59 to 611       611/611
(100 %)
13 diff
(97.9 %id)
BG472383 eye, retinoblastoma .a 90 to 680 59 to 643       641/643
(99 %)
25 diff
(96.2 %id)
BG699143 brain, hippocampus .a 90 to 793 61 to 763       757/763
(99 %)
11 diff
(98.6 %id)
DA629210 Kidney .a 90 to 598 64 to 571   capped   570/570
(100 %)
7 diff
(98.8 %id)
CN312012 embryonic stem cells, cell lines H1, H7, andH9 .a 94 to 637 1 to 544       544/544
(100 %)
2 diff
(99.7 %id)
TI_154133402   .a 298 to 975 49 to 730     Submitted on the opposite strand 682/1005
(67 %)
20 diff
(98.1 %id)
TI_151723195   .a 298 to 1216 43 to 945     Submitted on the opposite strand 903/1043
(86 %)
28 diff
(97.4 %id)
AW575796 lymph .a 304 to 898 1 to 595     Submitted on the opposite strand 595/595
(100 %)
0 diff
(100 %id)
CD687432 normal nasopharynx .a 408 to 1035 39 to 666       628/666
(94 %)
6 diff
(99.1 %id)
DA006530.
matches multiple genes
  .a 416 to 968 2 to 554   capped also hits gene DHFRP1 553/553
(100 %)
2 diff
(99.7 %id)
DA000496.
matches multiple genes
  .a 417 to 938 2 to 523   capped also hits gene DHFRP1 522/522
(100 %)
0 diff
(100 %id)
DA439215.
matches multiple genes
tongue, tumor tissue .a 417 to 956 2 to 541   capped also hits gene DHFRP1 540/540
(100 %)
0 diff
(100 %id)
DA478850.
matches multiple genes
  .a 417 to 992 2 to 577   capped also hits gene DHFRP1 576/576
(100 %)
2 diff
(99.7 %id)
AU099092.
matches multiple genes
  .a 417 to 716 1 to 300     also hits gene DHFRP1 300/300
(100 %)
2 diff
(99.4 %id)
AU104222.
matches multiple genes
  .a 417 to 466 1 to 50   tiling clone, also hits gene DHFRP1 50/50
(100 %)
2 diff
(96.0 %id)
BP248007.
matches multiple genes
Kidney .a 417 to 996 1 to 582     also hits gene DHFRP1 582/582
(100 %)
6 diff
(99.0 %id)
DA658726.
matches multiple genes
  .a 417 to 979 2 to 564   capped also hits gene DHFRP1 563/563
(100 %)
0 diff
(100 %id)
DB113576.
matches multiple genes
thymus .a 417 to 1003 2 to 588   capped also hits gene DHFRP1 587/587
(100 %)
0 diff
(100 %id)
DB124435.
matches multiple genes
thymus .a 417 to 972 2 to 557   capped also hits gene DHFRP1 556/557
(99 %)
0 diff
(100 %id)
DA433382.
matches multiple genes
tongue, tumor tissue .a 418 to 1130 2 to 719   capped also hits gene DHFRP1 718/845
(84 %)
8 diff
(99.1 %id)
DA441903.
matches multiple genes
tongue, tumor tissue .a 418 to 981 2 to 565   capped also hits gene DHFRP1 564/564
(100 %)
0 diff
(100 %id)
DA473014.
matches multiple genes
  .a 418 to 930 2 to 514   capped also hits gene DHFRP1 513/513
(100 %)
0 diff
(100 %id)
DA479291.
matches multiple genes
  .a 418 to 984 2 to 568   capped also hits gene DHFRP1 567/567
(100 %)
2 diff
(99.7 %id)
DA613524.
matches multiple genes
  .a 418 to 989 2 to 573   capped also hits gene DHFRP1 572/572
(100 %)
2 diff
(99.7 %id)
BP275678.
matches multiple genes
Kidney .a 418 to 845 1 to 428     also hits gene DHFRP1 428/563
(76 %)
15 diff
(97.4 %id)
DA734313.
matches multiple genes
  .a 418 to 795 2 to 380   capped also hits gene DHFRP1 379/379
(100 %)
14 diff
(96.4 %id)
AU130196.
matches multiple genes
  .a 418 to 1238 2 to 821   capped also hits gene DHFRP1 820/820
(100 %)
4 diff
(99.6 %id)
AU130635.
matches multiple genes
  .a 418 to 1230 2 to 814   capped also hits gene DHFRP1 813/813
(100 %)
3 diff
(99.7 %id)
DA814123.
matches multiple genes
  .a 418 to 989 2 to 573   capped also hits gene DHFRP1 572/572
(100 %)
0 diff
(100 %id)
DA819632.
matches multiple genes
  .a 418 to 989 2 to 573   capped also hits gene DHFRP1 572/572
(100 %)
0 diff
(100 %id)
DA902611.
matches multiple genes
  .a 418 to 989 2 to 573   capped also hits gene DHFRP1 572/572
(100 %)
1 diff
(99.9 %id)
DA908393.
matches multiple genes
  .a 418 to 967 2 to 551   capped also hits gene DHFRP1 550/550
(100 %)
0 diff
(100 %id)
DA915232.
matches multiple genes
  .a 418 to 967 2 to 551   capped also hits gene DHFRP1 550/550
(100 %)
1 diff
(99.9 %id)
DA936017.
matches multiple genes
Spleen .a 418 to 964 2 to 548   capped also hits gene DHFRP1 547/547
(100 %)
2 diff
(99.7 %id)
DA997994.
matches multiple genes
  .a 418 to 982 2 to 566   capped also hits gene DHFRP1 565/565
(100 %)
0 diff
(100 %id)
DB101403.
matches multiple genes
thymus .a 418 to 984 2 to 568   capped also hits gene DHFRP1 567/567
(100 %)
0 diff
(100 %id)
DB102010.
matches multiple genes
thymus .a 418 to 970 2 to 554   capped also hits gene DHFRP1 553/554
(99 %)
1 diff
(99.9 %id)
DB110528.
matches multiple genes
thymus .a 418 to 1002 2 to 586   capped also hits gene DHFRP1 585/585
(100 %)
0 diff
(100 %id)
DB117638.
matches multiple genes
thymus .a 418 to 969 2 to 553   capped also hits gene DHFRP1 552/552
(100 %)
1 diff
(99.9 %id)
DB133143.
matches multiple genes
thymus .a 418 to 989 2 to 573   capped also hits gene DHFRP1 572/572
(100 %)
1 diff
(99.9 %id)
DB146588.
matches multiple genes
thymus .a 418 to 971 2 to 555   capped also hits gene DHFRP1 554/554
(100 %)
1 diff
(99.9 %id)
DB187220.
matches multiple genes
liver, tumor tissue .a 418 to 966 2 to 550   capped also hits gene DHFRP1 549/549
(100 %)
0 diff
(100 %id)
AU104221   .a 419 to 468 1 to 50       50/50
(100 %)
2 diff
(96.0 %id)
BJ994461.
matches multiple genes
hepatoblastoma .a 419 to 975 1 to 557     also hits gene DHFRP1 557/557
(100 %)
0 diff
(100 %id)
DA028133.
matches multiple genes
  .a 420 to 987 2 to 569   capped also hits gene DHFRP1 568/568
(100 %)
0 diff
(100 %id)
CN312020.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .a 420 to 934 1 to 516     also hits gene DHFRP1 516/516
(100 %)
6 diff
(98.9 %id)
DA453551.
matches multiple genes
tongue, tumor tissue .a 420 to 976 2 to 558   capped also hits gene DHFRP1 557/557
(100 %)
0 diff
(100 %id)
DA464854.
matches multiple genes
  .a 420 to 980 2 to 562   capped also hits gene DHFRP1 561/561
(100 %)
0 diff
(100 %id)
DA477303.
matches multiple genes
  .a 420 to 980 2 to 562   capped also hits gene DHFRP1 561/561
(100 %)
0 diff
(100 %id)
DA489256.
matches multiple genes
brain .a 420 to 969 2 to 551   capped also hits gene DHFRP1 550/550
(100 %)
0 diff
(100 %id)
DA495984.
matches multiple genes
brain .a 420 to 967 2 to 549   capped also hits gene DHFRP1 548/548
(100 %)
0 diff
(100 %id)
DA549690.
matches multiple genes
  .a 420 to 989 2 to 571   capped also hits gene DHFRP1 570/570
(100 %)
0 diff
(100 %id)
DA579852.
matches multiple genes
  .a 420 to 978 2 to 560   capped also hits gene DHFRP1 559/559
(100 %)
0 diff
(100 %id)
DA628651.
matches multiple genes
Kidney .a 420 to 956 2 to 538   capped also hits gene DHFRP1 537/537
(100 %)
1 diff
(99.9 %id)
DA630970.
matches multiple genes
Kidney .a 420 to 989 2 to 571   capped also hits gene DHFRP1 570/570
(100 %)
1 diff
(99.9 %id)
DA653296.
matches multiple genes
  .a 420 to 1003 2 to 585   capped also hits gene DHFRP1 584/584
(100 %)
1 diff
(99.9 %id)
DA742306.
matches multiple genes
  .a 420 to 937 2 to 519   capped also hits gene DHFRP1 518/518
(100 %)
0 diff
(100 %id)
DA742811.
matches multiple genes
  .a 420 to 969 2 to 551   capped also hits gene DHFRP1 550/550
(100 %)
1 diff
(99.9 %id)
DA747984.
matches multiple genes
  .a 420 to 974 2 to 556   capped also hits gene DHFRP1 555/555
(100 %)
0 diff
(100 %id)
DA915813.
matches multiple genes
small intestine .a 420 to 1175 2 to 756   capped also hits gene DHFRP1 755/755
(100 %)
5 diff
(99.4 %id)
DA915923.
matches multiple genes
small intestine .a 420 to 941 2 to 527   capped also hits gene DHFRP1 526/526
(100 %)
5 diff
(99.1 %id)
DA921362.
matches multiple genes
small intestine .a 420 to 769 2 to 351   capped also hits gene DHFRP1 350/350
(100 %)
0 diff
(100 %id)
DA925134.
matches multiple genes
small intestine .a 420 to 986 2 to 568   capped also hits gene DHFRP1 567/567
(100 %)
2 diff
(99.7 %id)
DB089648.
matches multiple genes
testis .a 420 to 978 2 to 560   capped also hits gene DHFRP1 559/559
(100 %)
1 diff
(99.9 %id)
DB140150.
matches multiple genes
thymus .a 420 to 956 2 to 538   capped also hits gene DHFRP1 537/537
(100 %)
1 diff
(99.9 %id)
DB154072.
matches multiple genes
thymus .a 420 to 1005 2 to 587   capped also hits gene DHFRP1 586/586
(100 %)
0 diff
(100 %id)
DB182241.
matches multiple genes
liver, tumor tissue .a 420 to 977 2 to 559   capped also hits gene DHFRP1 558/558
(100 %)
0 diff
(100 %id)
BP429091.
matches multiple genes
  .a 422 to 758 1 to 337     also hits gene DHFRP1 337/337
(100 %)
6 diff
(98.3 %id)
DA798373.
matches multiple genes
brain .a 422 to 968 2 to 548   capped also hits gene DHFRP1 547/547
(100 %)
1 diff
(99.9 %id)
BG532440.
matches multiple genes
embryonal carcinoma, testis .a 424 to 1262 1 to 835     also hits gene DHFRP1 835/836
(99 %)
11 diff
(98.7 %id)
DA554254.
matches multiple genes
  .a 426 to 995 2 to 571   capped also hits gene DHFRP1 570/570
(100 %)
1 diff
(99.9 %id)
CN311996.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .a 428 to 977 1 to 550     also hits gene DHFRP1 550/550
(100 %)
3 diff
(99.5 %id)
DA443956.
matches multiple genes
tongue, tumor tissue .a 429 to 1002 2 to 575   capped also hits gene DHFRP1 574/574
(100 %)
3 diff
(99.5 %id)
BM801818.
matches multiple genes
duodenal adenocarcinoma, cell line, small intestine .a 430 to 1388 1 to 960     also hits gene DHFRP1 960/962
(99 %)
9 diff
(99.1 %id)
DA613983.
matches multiple genes
  .a 430 to 999 2 to 571   capped also hits gene DHFRP1 570/570
(100 %)
0 diff
(100 %id)
DA661580.
matches multiple genes
  .a 430 to 1000 2 to 572   capped also hits gene DHFRP1 571/571
(100 %)
0 diff
(100 %id)
AU127142.
matches multiple genes
  .a 430 to 1030 2 to 602   capped also hits gene DHFRP1 601/603
(99 %)
1 diff
(99.9 %id)
DA904176.
matches multiple genes
  .a 430 to 995 2 to 567   capped also hits gene DHFRP1 566/566
(100 %)
0 diff
(100 %id)
DB012655.
matches multiple genes
esophageal, tumor tissue .a 430 to 1002 2 to 574   capped also hits gene DHFRP1 573/573
(100 %)
1 diff
(99.9 %id)
DA003087.
matches multiple genes
  .a 431 to 986 2 to 557   capped also hits gene DHFRP1 556/556
(100 %)
1 diff
(99.9 %id)
CN312010.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .a 431 to 624 9 to 202     also hits gene DHFRP1 194/203
(95 %)
11 diff
(94.6 %id)
AL040147.
matches multiple genes
testis .a 431 to 886 1 to 456     also hits gene DHFRP1 456/456
(100 %)
2 diff
(99.6 %id)
BI759776.
matches multiple genes
pooled colon, kidney, stomach .a 431 to 967 1 to 537     also hits gene DHFRP1 537/537
(100 %)
0 diff
(100 %id)
TI_57148460.
matches multiple genes
  .a 431 to 967 42 to 578     also hits gene DHFRP1 537/578
(92 %)
6 diff
(99.0 %id)
T91432.
matches multiple genes
liver and spleen .a 432 to 776 1 to 347     also hits gene DHFRP1 347/363
(95 %)
10 diff
(97.3 %id)
BM011884.
matches multiple genes
brain, neuroblastoma, cell line .a 432 to 1044 1 to 606     also hits gene DHFRP1 606/607
(99 %)
11 diff
(98.2 %id)
BC000192 Eye, retinoblastoma .a 433 to 3263 1 to 2831   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 2831/2831
(100 %)
4 diff
(99.9 %id)
TI_59381065.
matches multiple genes
  .a 433 to 1044 92 to 696     also hits gene DHFRP1 605/606
(99 %)
10 diff
(98.4 %id)
DB449174.
matches multiple genes
testis .a 434 to 857 1 to 425     also hits gene DHFRP1 425/425
(100 %)
1 diff
(99.8 %id)
BG615705.
matches multiple genes
embryonal carcinoma, testis .a 435 to 1126 1 to 696     also hits gene DHFRP1 696/848
(82 %)
15 diff
(98.3 %id)
BU850287.
matches multiple genes
ovary, teratocarcinoma, cell line .a 435 to 1336 1 to 912     also hits gene DHFRP1 912/914
(99 %)
20 diff
(97.9 %id)
AL525560.
matches multiple genes
brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 436 to 1459 1 to 1010     also hits gene DHFRP1 1010/1020
(99 %)
22 diff
(97.9 %id)
BF701563.
matches multiple genes
brain, primitive neuroectoderm .a 436 to 1154 1 to 706     also hits gene DHFRP1 706/829
(85 %)
18 diff
(97.9 %id)
BG170429.
matches multiple genes
hypernephroma, cell line, Kidney .a 436 to 1244 1 to 803     also hits gene DHFRP1 803/987
(81 %)
52 diff
(94.8 %id)
BM903845 eye, retinoblastoma .a 436 to 1366 8 to 957       950/995
(95 %)
46 diff
(95.4 %id)
BP431015.
matches multiple genes
  .a 436 to 834 1 to 399     also hits gene DHFRP1 399/399
(100 %)
2 diff
(99.5 %id)
BG771877.
matches multiple genes
testis .a 437 to 1144 1 to 708     also hits gene DHFRP1 708/708
(100 %)
14 diff
(98.1 %id)
DA920724.
matches multiple genes
small intestine .a 437 to 1000 2 to 565   capped also hits gene DHFRP1 564/564
(100 %)
0 diff
(100 %id)
BM466589.
matches multiple genes
eye, retinoblastoma .a 438 to 1379 1 to 950     also hits gene DHFRP1 950/1016
(93 %)
11 diff
(99.0 %id)
AA399962.
matches multiple genes
  .a 440 to 502 1 to 63     also hits gene DHFRP1 63/63
(100 %)
0 diff
(100 %id)
BU153773.
matches multiple genes
eye, retinoblastoma .a 442 to 1324 1 to 884     also hits gene DHFRP1 884/892
(99 %)
4 diff
(99.6 %id)
BQ431730.
matches multiple genes
melanotic melanoma, skin .a 442 to 1305 1 to 870     also hits gene DHFRP1 870/872
(99 %)
12 diff
(98.7 %id)
BU173159.
matches multiple genes
eye, retinoblastoma .a 442 to 1339 1 to 900     also hits gene DHFRP1 900/900
(100 %)
4 diff
(99.6 %id)
CN312008.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .a 443 to 1122 1 to 679     also hits gene DHFRP1 679/681
(99 %)
5 diff
(99.3 %id)
BQ071727 brain, neuroblastoma, cell line .a 443 to 1447 1 to 1007       1007/1063
(94 %)
18 diff
(98.4 %id)
DB445651.
matches multiple genes
testis .a 444 to 875 1 to 432     also hits gene DHFRP1 432/432
(100 %)
2 diff
(99.6 %id)
BQ432463.
matches multiple genes
leiomyosarcoma, uterus .a 444 to 1312 1 to 875     also hits gene DHFRP1 875/885
(98 %)
12 diff
(98.7 %id)
CN311999.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .a 445 to 1188 1 to 744     also hits gene DHFRP1 744/744
(100 %)
4 diff
(99.5 %id)
DA505790.
matches multiple genes
brain .a 445 to 1012 2 to 569   capped also hits gene DHFRP1 568/568
(100 %)
0 diff
(100 %id)
AA252991.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 445 to 502 1 to 58     also hits gene DHFRP1 58/58
(100 %)
0 diff
(100 %id)
BU177294.
matches multiple genes
melanotic melanoma, skin .a 448 to 1339 1 to 895   tiling clone, also hits gene DHFRP1 895/895
(100 %)
8 diff
(99.2 %id)
BU941838.
matches multiple genes
mixed (pool of 40 RNAs) .a 448 to 1210 1 to 773     also hits gene DHFRP1 773/784
(98 %)
20 diff
(97.5 %id)
CN312015.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .a 449 to 1053 12 to 615     also hits gene DHFRP1 604/615
(98 %)
6 diff
(99.1 %id)
BG248108.
matches multiple genes
adenocarcinoma cell line, colon .a 449 to 1128 1 to 678     also hits gene DHFRP1 678/964
(70 %)
21 diff
(97.9 %id)
BM833910.
matches multiple genes
stomach .a 449 to 1055 1 to 607     also hits gene DHFRP1 607/607
(100 %)
0 diff
(100 %id)
DA479430.
matches multiple genes
  .a 450 to 1007 2 to 559   capped also hits gene DHFRP1 558/558
(100 %)
0 diff
(100 %id)
DA484689.
matches multiple genes
brain .a 450 to 1006 2 to 558   capped also hits gene DHFRP1 557/557
(100 %)
0 diff
(100 %id)
DA996891.
matches multiple genes
  .a 450 to 991 2 to 544   capped also hits gene DHFRP1 543/543
(100 %)
1 diff
(99.9 %id)
DB016890.
matches multiple genes
esophageal, tumor tissue .a 450 to 1014 2 to 565   capped also hits gene DHFRP1 564/564
(100 %)
1 diff
(99.9 %id)
BC070280.
matches multiple genes
Pooled, 40 cell lines .a 451 to 1387 1 to 937   available from MGC, AAA also hits gene DHFRP1 937/937
(100 %)
2 diff
(99.8 %id)
DB460934.
matches multiple genes
testis .a 451 to 923 1 to 473     also hits gene DHFRP1 473/473
(100 %)
0 diff
(100 %id)
AU104220.
matches multiple genes
  .a 451 to 500 1 to 50     also hits gene DHFRP1 50/50
(100 %)
1 diff
(98.0 %id)
BP239339.
matches multiple genes
Liver .a 451 to 955 1 to 508     also hits gene DHFRP1 508/607
(83 %)
19 diff
(96.9 %id)
BE250809.
matches multiple genes
eye, retinoblastoma .a 451 to 995 1 to 545     also hits gene DHFRP1 545/545
(100 %)
0 diff
(100 %id)
BF668069.
matches multiple genes
brain, primitive neuroectoderm .a 451 to 1110 1 to 653     also hits gene DHFRP1 653/894
(73 %)
16 diff
(98.3 %id)
DA005949.
matches multiple genes
  .a 452 to 1009 2 to 559   capped also hits gene DHFRP1 558/558
(100 %)
1 diff
(99.9 %id)
DA005952.
matches multiple genes
  .a 452 to 1010 2 to 560   capped also hits gene DHFRP1 559/559
(100 %)
0 diff
(100 %id)
AK312642.
matches multiple genes
  .a 452 to 1051 1 to 600     also hits gene DHFRP1 600/600
(100 %)
0 diff
(100 %id)
AV714645.
matches multiple genes
  .a 452 to 1095 1 to 644     also hits gene DHFRP1 644/644
(100 %)
3 diff
(99.6 %id)
BE252613.
matches multiple genes
eye, retinoblastoma .a 452 to 1050 1 to 598     also hits gene DHFRP1 598/598
(100 %)
1 diff
(99.9 %id)
DA000893.
matches multiple genes
  .a 453 to 950 2 to 499   capped also hits gene DHFRP1 498/498
(100 %)
0 diff
(100 %id)
BE253372.
matches multiple genes
eye, retinoblastoma .a 453 to 1084 1 to 627     also hits gene DHFRP1 627/630
(99 %)
8 diff
(98.8 %id)
DA609772.
matches multiple genes
  .a 453 to 1019 2 to 568   capped also hits gene DHFRP1 567/568
(99 %)
1 diff
(99.9 %id)
DA913886.
matches multiple genes
  .a 453 to 1012 2 to 561   capped also hits gene DHFRP1 560/560
(100 %)
0 diff
(100 %id)
DB096212.
matches multiple genes
testis .a 455 to 1011 2 to 558   capped also hits gene DHFRP1 557/557
(100 %)
0 diff
(100 %id)
BE887227.
matches multiple genes
leiomyosarcoma, uterus .a 456 to 1154 1 to 705     also hits gene DHFRP1 705/935
(75 %)
19 diff
(98.0 %id)
DA665388.
matches multiple genes
  .a 457 to 998 2 to 543   capped also hits gene DHFRP1 542/542
(100 %)
0 diff
(100 %id)
BU569023.
matches multiple genes
testis .a 458 to 1214 1 to 772     also hits gene DHFRP1 772/823
(93 %)
26 diff
(96.9 %id)
BE563920.
matches multiple genes
bone marrow, from chronic myelogenous leukemia .a 459 to 939 1 to 486     also hits gene DHFRP1 486/729
(66 %)
14 diff
(98.1 %id)
BX356815.
matches multiple genes
Placenta Cot 25-normalized .a 460 to 1493 1 to 1033     also hits gene DHFRP1 1030/1053
(97 %)
34 diff
(96.8 %id)
BG497327.
matches multiple genes
lung, mucoepidermoid carcinoma .a 460 to 1111 1 to 659     also hits gene DHFRP1 659/663
(99 %)
16 diff
(97.6 %id)
BG528145.
matches multiple genes
lung, mucoepidermoid carcinoma .a 460 to 1121 1 to 661     also hits gene DHFRP1 661/664
(99 %)
10 diff
(98.5 %id)
T29009.
matches multiple genes
blood, white blood cells .a 460 to 758 1 to 299     also hits gene DHFRP1 299/299
(100 %)
0 diff
(100 %id)
J00140   .a 461 to 1424 16 to 979       964/979
(98 %)
8 diff
(99.2 %id)
BG686051 B-cells, primary B-cells from tonsils (cell line) .a 462 to 968 317 to 818       767/881
(87 %)
25 diff
(97.2 %id)
BE391734.
matches multiple genes
endometrium, adenocarcinoma cell line, uterus .a 463 to 1110 35 to 683     also hits gene DHFRP1 649/722
(89 %)
32 diff
(95.6 %id)
BX280293.
matches multiple genes
liver and spleen .a 464 to 942 1 to 479     also hits gene DHFRP1 479/479
(100 %)
1 diff
(99.8 %id)
BX364783.
matches multiple genes
Placenta Cot 25-normalized .a 464 to 1376 1 to 911   tiling clone, also hits gene DHFRP1 911/915
(99 %)
3 diff
(99.7 %id)
BF306741.
matches multiple genes
muscle, rhabdomyosarcoma .a 465 to 1195 1 to 723     also hits gene DHFRP1 723/727
(99 %)
18 diff
(97.6 %id)
DB446350.
matches multiple genes
testis .a 467 to 923 1 to 457     also hits gene DHFRP1 457/457
(100 %)
1 diff
(99.8 %id)
BF212572.
matches multiple genes
bone marrow, from chronic myelogenous leukemia .a 467 to 1118 1 to 661     also hits gene DHFRP1 661/922
(71 %)
41 diff
(95.6 %id)
BF184269.
matches multiple genes
bone marrow, from chronic myelogenous leukemia .a 467 to 1098 1 to 628     also hits gene DHFRP1 628/826
(76 %)
9 diff
(99.0 %id)
BP244131.
matches multiple genes
Liver .a 473 to 1042 1 to 570     also hits gene DHFRP1 570/570
(100 %)
7 diff
(98.8 %id)
DA004007.
matches multiple genes
  .a 480 to 1002 2 to 524   capped also hits gene DHFRP1 523/523
(100 %)
0 diff
(100 %id)
BE397236.
matches multiple genes
Burkitt lymphoma, lymph .a 480 to 1103 1 to 626     also hits gene DHFRP1 626/627
(99 %)
16 diff
(97.5 %id)
BF132819.
matches multiple genes
lung, mucoepidermoid carcinoma .a 480 to 1194 1 to 699     also hits gene DHFRP1 699/875
(79 %)
24 diff
(97.3 %id)
DB151427.
matches multiple genes
thymus .a 483 to 1049 2 to 568   capped also hits gene DHFRP1 567/567
(100 %)
0 diff
(100 %id)
BE909845.
matches multiple genes
epithelioid carcinoma, Pancreas .a 485 to 1265 1 to 783     also hits gene DHFRP1 783/917
(85 %)
31 diff
(96.7 %id)
BM470805 eye, retinoblastoma .a 486 to 1439 1 to 957       957/990
(96 %)
37 diff
(96.3 %id)
BQ228528.
matches multiple genes
embryonal carcinoma, cell line, testis .a 487 to 1227 1 to 751     also hits gene DHFRP1 751/1147
(65 %)
18 diff
(98.5 %id)
CV025588.
matches multiple genes
mixed .a 488 to 1050 1 to 563     also hits gene DHFRP1 563/640
(87 %)
3 diff
(99.6 %id)
EU145592.
matches multiple genes
  .a 488 to 1051 1 to 564     also hits gene DHFRP1 564/564
(100 %)
0 diff
(100 %id)
V00507.
matches multiple genes
  .a 488 to 1051 1 to 564     also hits gene DHFRP1 564/564
(100 %)
0 diff
(100 %id)
BE780925.
matches multiple genes
eye, retinoblastoma .a 490 to 850 1 to 361     also hits gene DHFRP1 361/362
(99 %)
1 diff
(99.8 %id)
BY994673.
matches multiple genes
  .a 490 to 1114 8 to 632     also hits gene DHFRP1 625/632
(98 %)
6 diff
(99.1 %id)
BM459215 lymph, lymphoma, cell line .a 491 to 1341 1 to 863       863/1122
(76 %)
22 diff
(98.1 %id)
BG328723.
matches multiple genes
adenocarcinoma cell line, colon .a 493 to 1056 1 to 564     also hits gene DHFRP1 564/564
(100 %)
0 diff
(100 %id)
AA314334.
matches multiple genes
colon .a 494 to 885 1 to 393     also hits gene DHFRP1 393/393
(100 %)
3 diff
(99.3 %id)
CN312011.
matches multiple genes
embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 495 to 1221 1 to 727     also hits gene DHFRP1 727/727
(100 %)
2 diff
(99.8 %id)
DA448844.
matches multiple genes
tongue, tumor tissue .a 503 to 1052 2 to 551   capped also hits gene DHFRP1 550/550
(100 %)
0 diff
(100 %id)
BE295309.
matches multiple genes
muscle, rhabdomyosarcoma .a 510 to 1217 1 to 700     also hits gene DHFRP1 700/749
(93 %)
18 diff
(97.6 %id)
BE617318.
matches multiple genes
adenocarcinoma, colon .a 519 to 1261 1 to 731     also hits gene DHFRP1 731/954
(76 %)
12 diff
(98.8 %id)
BE883650.
matches multiple genes
leiomyosarcoma, uterus .a 523 to 1289 1 to 758     also hits gene DHFRP1 758/936
(80 %)
35 diff
(96.3 %id)
CN312000.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .a 529 to 1188 1 to 658     also hits gene DHFRP1 658/658
(100 %)
2 diff
(99.7 %id)
CN312013.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .a 542 to 966 1 to 425     also hits gene DHFRP1 425/425
(100 %)
2 diff
(99.6 %id)
BQ650068.
matches multiple genes
hepatocellular carcinoma, cell line, Liver .a 557 to 1134 1 to 578   AAA also hits gene DHFRP1 578/578
(100 %)
0 diff
(100 %id)
BQ644196.
matches multiple genes
hepatocellular carcinoma, cell line, Liver .a 557 to 1134 1 to 578   AAA also hits gene DHFRP1 578/578
(100 %)
0 diff
(100 %id)
TI_59381186   .a 558 to 1009 106 to 562   AAA   457/921
(49 %)
14 diff
(98.5 %id)
TI_1948089339   .a 572 to 1050 604 to 124       481/1442
(33 %)
9 diff
(99.4 %id)
BG387847.
matches multiple genes
embryonal carcinoma, cell line, testis .a 606 to 1353 1 to 739     also hits gene DHFRP1 739/936
(78 %)
20 diff
(97.9 %id)
CA422907 cell lines, Chondrosarcoma .a 689 to 1386 710 to 19   AAA   692/693
(99 %)
7 diff
(99.0 %id)
TI_1948089340.
matches multiple genes
  .a 700 to 1050 477 to 127     also hits gene DHFRP1 351/378
(92 %)
0 diff
(100 %id)
CA426593 cell lines, Chondrosarcoma .a 742 to 1387 665 to 19   AAA   647/647
(100 %)
1 diff
(99.9 %id)
BU632674 cell lines, Chondrosarcoma .a 769 to 1380 628 to 17   AAA   612/612
(100 %)
0 diff
(100 %id)
AU124075   .a 788 to 1589 2 to 797   capped   796/798
(99 %)
15 diff
(98.2 %id)
BU630686.
matches multiple genes
cell lines, Chondrosarcoma .a 797 to 1380 603 to 19   AAA also hits gene DHFRP1 585/585
(100 %)
1 diff
(99.9 %id)
BG113084.
matches multiple genes
Bone, osteosarcoma, cell line .a 798 to 1429 1 to 655     also hits gene DHFRP1 655/951
(68 %)
48 diff
(95.0 %id)
BE780840 eye, retinoblastoma .a 802 to 1552 1 to 741       741/927
(79 %)
21 diff
(97.8 %id)
DB162789.
matches multiple genes
thymus .a 850 to 1443 2 to 596   tiling clone, capped also hits gene DHFRP1 595/595
(100 %)
4 diff
(99.4 %id)
BQ682319 melanotic melanoma, cell line, skin .a 866 to 1282 1 to 420       420/912
(46 %)
8 diff
(99.2 %id)
BX503445 Liver .a 870 to 1085 218 to 2     Submitted on the opposite strand 217/237
(91 %)
2 diff
(99.2 %id)
H25209.
matches multiple genes
whole brain .a 885 to 1188 1 to 304     Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base), also hits gene DHFRP1 304/304
(100 %)
1 diff
(99.7 %id)
AW013865.
matches multiple genes
  .a 885 to 1376 509 to 18   AAA also hits gene DHFRP1 492/492
(100 %)
1 diff
(99.8 %id)
DB576293.
matches multiple genes
hypothalamus .a 891 to 1384 1 to 494     Submitted on the opposite strand, also hits gene DHFRP1 494/495
(99 %)
2 diff
(99.6 %id)
BM719920.
matches multiple genes
eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 903 to 1387 499 to 15   AAA Submitted on the opposite strand, also hits gene DHFRP1 485/485
(100 %)
1 diff
(99.8 %id)
EH339491.
matches multiple genes
  .a 904 to 982 1 to 79     also hits gene DHFRP1 79/79
(100 %)
0 diff
(100 %id)
DA495799 brain .a 910 to 1479 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB576543.
matches multiple genes
hypothalamus .a 922 to 1384 1 to 463     Submitted on the opposite strand, also hits gene DHFRP1 463/464
(99 %)
2 diff
(99.6 %id)
DA749111   .a 929 to 1500 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA151791 amygdala .a 943 to 1479 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DB527254 testis .a 950 to 1384 1 to 435     Submitted on the opposite strand 435/435
(100 %)
0 diff
(100 %id)
BU860694.
matches multiple genes
mixed (pool of 40 RNAs) .a 973 to 1391 1 to 420     also hits gene DHFRP1 420/448
(93 %)
3 diff
(99.4 %id)
BU430731 lymph .a 990 to 1133 8 to 151       144/151
(95 %)
0 diff
(100 %id)
TI_154152235.
matches multiple genes
  .a 990 to 1520 81 to 617     also hits gene DHFRP1 537/648
(82 %)
6 diff
(99.1 %id)
BP351792   .a 1004 to 1586 1 to 583       583/583
(100 %)
0 diff
(100 %id)
AA454921.
matches multiple genes
germinal center B cell .a 1028 to 1516 516 to 28   AAA also hits gene DHFRP1 489/489
(100 %)
2 diff
(99.6 %id)
DB510662.
matches multiple genes
testis .a 1040 to 1385 1 to 346     Submitted on the opposite strand, also hits gene DHFRP1 346/348
(99 %)
2 diff
(99.5 %id)
AI131225.
matches multiple genes
heart .a 1046 to 1386 341 to 1     also hits gene DHFRP1 341/341
(100 %)
1 diff
(99.8 %id)
BP268000 thyroid .a 1062 to 1648 1 to 586       586/586
(100 %)
10 diff
(98.3 %id)
BP267295 thyroid .a 1069 to 1639 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
T91344.
matches multiple genes
liver and spleen .a 1070 to 1373 304 to 1     also hits gene DHFRP1 304/306
(99 %)
2 diff
(99.4 %id)
AA010576 heart .a 1072 to 1387 316 to 1       316/316
(100 %)
0 diff
(100 %id)
AA778381 heart .a 1072 to 1376 305 to 1       305/305
(100 %)
0 diff
(100 %id)
AA694127.
matches multiple genes
liver and spleen .a 1072 to 1387 333 to 18   AAA also hits gene DHFRP1 316/316
(100 %)
2 diff
(99.4 %id)
AA700469.
matches multiple genes
liver and spleen .a 1072 to 1386 315 to 1     also hits gene DHFRP1 315/315
(100 %)
1 diff
(99.7 %id)
AA699792.
matches multiple genes
liver and spleen .a 1072 to 1387 316 to 1     also hits gene DHFRP1 316/316
(100 %)
1 diff
(99.7 %id)
AA682438.
matches multiple genes
liver and spleen .a 1072 to 1359 286 to 1     also hits gene DHFRP1 286/286
(100 %)
7 diff
(97.6 %id)
AA252992.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1072 to 1387 329 to 14   AAA also hits gene DHFRP1 316/316
(100 %)
2 diff
(99.4 %id)
AA215695 germinal center B cell .a 1072 to 1389 322 to 5       318/322
(98 %)
0 diff
(100 %id)
AA401306.
matches multiple genes
  .a 1072 to 1389 320 to 3     also hits gene DHFRP1 318/320
(99 %)
0 diff
(100 %id)
AI090860.
matches multiple genes
  .a 1072 to 1389 322 to 5     also hits gene DHFRP1 318/322
(98 %)
0 diff
(100 %id)
AI040147.
matches multiple genes
  .a 1072 to 1389 320 to 3     also hits gene DHFRP1 318/320
(99 %)
0 diff
(100 %id)
AI040148.
matches multiple genes
  .a 1072 to 1389 322 to 5     also hits gene DHFRP1 318/322
(98 %)
0 diff
(100 %id)
AI187739.
matches multiple genes
  .a 1072 to 1386 318 to 4     also hits gene DHFRP1 315/319
(98 %)
0 diff
(100 %id)
AI332971.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1072 to 1389 319 to 2     also hits gene DHFRP1 318/319
(99 %)
0 diff
(100 %id)
AI352150.
matches multiple genes
  .a 1072 to 1389 325 to 8     also hits gene DHFRP1 318/325
(97 %)
0 diff
(100 %id)
BF439092.
matches multiple genes
pooled .a 1072 to 1389 318 to 1     also hits gene DHFRP1 318/318
(100 %)
1 diff
(99.7 %id)
AA290577 germinal center B cell .a 1073 to 1191 1 to 118   fully sequenced,   118/118
(100 %)
0 diff
(100 %id)
DA915738.
matches multiple genes
small intestine .a 1076 to 1807 2 to 727   capped also hits gene DHFRP1 726/801
(90 %)
12 diff
(98.6 %id)
R91775 liver and spleen .a 1083 to 1382 1 to 301       301/301
(100 %)
3 diff
(99.1 %id)
BM475776 embryonal carcinoma, cell line, testis .a 1084 to 2035 1 to 951       951/1011
(94 %)
23 diff
(97.8 %id)
W03282 liver and spleen .a 1105 to 1596 1 to 488       488/492
(99 %)
6 diff
(98.8 %id)
BG548618 lung .a 1123 to 1717 1 to 594       594/594
(100 %)
3 diff
(99.5 %id)
BG292279 bladder, transitional cell papilloma, cell line .a 1147 to 1926 1 to 780       780/997
(78 %)
16 diff
(98.4 %id)
BG425450 Kidney, renal cell adenocarcinoma .a 1148 to 1799 1 to 655       655/1129
(58 %)
15 diff
(98.7 %id)
BM470635 leiomyosarcoma, uterus .a 1151 to 1848 29 to 726       698/1133
(61 %)
9 diff
(99.3 %id)
R00884.
matches multiple genes
liver and spleen .a 1156 to 1370 215 to 1     also hits gene DHFRP1 215/215
(100 %)
0 diff
(100 %id)
AA290600 germinal center B cell .a 1161 to 1378 235 to 18   fully sequenced, AAA   218/218
(100 %)
0 diff
(100 %id)
DR761668 embryonic stem .a 1168 to 1941 1 to 774       774/774
(100 %)
0 diff
(100 %id)
DA733545.
matches multiple genes
  .a 1172 to 1904 2 to 743   capped also hits gene DHFRP1 742/751
(98 %)
17 diff
(97.8 %id)
CX869845 embryonic stem .a 1179 to 1771 1 to 593       593/593
(100 %)
0 diff
(100 %id)
CN312019 embryonic stem cells, cell lines H1, H7, andH9 .a 1186 to 1927 13 to 753       741/753
(98 %)
6 diff
(99.3 %id)
BP269392 thyroid .a 1194 to 1773 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BP243391 Liver .a 1196 to 1769 1 to 574       574/574
(100 %)
1 diff
(99.9 %id)
BX369921 Placenta Cot 25-normalized .a 1216 to 1928 11 to 722       712/901
(79 %)
32 diff
(96.5 %id)
DA912151   .a 1220 to 1797 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
CN312006.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .a 1319 to 1901 17 to 599   tiling clone, also hits gene DHFRP1 583/599
(97 %)
6 diff
(99.0 %id)
CX870586 embryonic stem .a 1389 to 2096 22 to 728       707/728
(97 %)
6 diff
(99.2 %id)
BG403583 bladder, transitional cell papilloma, cell line .a 1390 to 2147 1 to 743       743/976
(76 %)
18 diff
(98.2 %id)
BG829201 muscle, rhabdomyosarcoma .a 1408 to 2077 1 to 674       674/698
(96 %)
18 diff
(97.5 %id)
DB176478.
matches multiple genes
kidney, tumor tissue .a 1449 to 2013 2 to 566   capped also hits gene DHFRP1 565/565
(100 %)
6 diff
(99.0 %id)
CN312007.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .a 1453 to 1937 1 to 485     also hits gene DHFRP1 485/485
(100 %)
2 diff
(99.6 %id)
CN312002.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .a 1454 to 2066 13 to 624   tiling clone, also hits gene DHFRP1 612/624
(98 %)
6 diff
(99.1 %id)
AW408089 lymph .a 1479 to 1821 7 to 350       344/350
(98 %)
2 diff
(99.5 %id)
BP225010   .a 1553 to 2130 1 to 582       582/582
(100 %)
12 diff
(98.0 %id)
BE540884 cervix .a 1567 to 2093 1 to 526       526/818
(64 %)
15 diff
(98.2 %id)
BE899155.
matches multiple genes
adenocarcinoma cell line, ovary .a 1575 to 2351 1 to 771   tiling clone, also hits gene DHFRP1 771/953
(80 %)
43 diff
(95.5 %id)
CD557893 testis .a 1626 to 2252 17 to 654       638/966
(66 %)
27 diff
(97.3 %id)
CB145810.
matches multiple genes
Liver .a 1639 to 2071 1 to 432     also hits gene DHFRP1 432/432
(100 %)
2 diff
(99.6 %id)
BE907826.
matches multiple genes
epithelioid carcinoma, Pancreas .a 1654 to 2050 1 to 400     also hits gene DHFRP1 400/400
(100 %)
10 diff
(97.5 %id)
BF084814.
matches multiple genes
denis_drash .a 1663 to 1807 16 to 160     also hits gene DHFRP1 145/165
(87 %)
2 diff
(98.8 %id)
BG986073.
matches multiple genes
denis_drash .a 1663 to 1807 16 to 160     also hits gene DHFRP1 145/165
(87 %)
2 diff
(98.8 %id)
BQ061500 lymph, lymphoma, cell line .a 1679 to 2111 1 to 436       436/1222
(35 %)
4 diff
(99.7 %id)
BQ061953 lymph, lymphoma, cell line .a 1679 to 2122 1 to 446       446/1095
(40 %)
4 diff
(99.7 %id)
H52042.
matches multiple genes
liver and spleen .a 1728 to 2053 1 to 327     also hits gene DHFRP1 327/327
(100 %)
6 diff
(98.2 %id)
BM710202.
matches multiple genes
eye, optic nerve .a 1755 to 2321 11 to 577   tiling clone, also hits gene DHFRP1 567/577
(98 %)
6 diff
(99.0 %id)
CN312001 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1811 to 2336 1 to 526       526/526
(100 %)
3 diff
(99.5 %id)
BP344043 synovial membrane .a 1826 to 2277 1 to 451       451/568
(79 %)
14 diff
(97.6 %id)
CX868676.
matches multiple genes
embryonic stem .a 1845 to 2668 1 to 824   tiling clone, also hits gene DHFRP1 824/824
(100 %)
2 diff
(99.8 %id)
AA083264   .a 1862 to 2098 1 to 238       238/238
(100 %)
9 diff
(96.3 %id)
DA616339   .a 1892 to 2465 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
CF136591 lymph .a 1915 to 2351 7 to 443       437/443
(98 %)
0 diff
(100 %id)
TI_154165732   .a 1915 to 2385 80 to 550       471/471
(100 %)
0 diff
(100 %id)
DB331619.
matches multiple genes
small intestine .a 1969 to 2487 518 to 1     also hits gene DHFRP1 518/522
(99 %)
7 diff
(98.7 %id)
BJ994462.
matches multiple genes
hepatoblastoma .a 1978 to 2453 476 to 1     also hits gene DHFRP1 476/476
(100 %)
1 diff
(99.8 %id)
BG388921 embryonal carcinoma, cell line, testis .a 1978 to 2715 1 to 738       738/754
(97 %)
19 diff
(97.5 %id)
BG033264 breast, mammary adenocarcinoma, cell line .a 2012 to 2771 1 to 753       753/947
(79 %)
22 diff
(97.7 %id)
N52980 liver and spleen .a 2016 to 2489 476 to 1       476/476
(100 %)
5 diff
(99.0 %id)
AI376144   .a 2038 to 2492 455 to 1       455/455
(100 %)
0 diff
(100 %id)
AA059177.
matches multiple genes
eye, retina .a 2056 to 2460 407 to 1     Submitted on the opposite strand, also hits gene DHFRP1 407/408
(99 %)
10 diff
(97.6 %id)
BE379341 endometrium, adenocarcinoma cell line, uterus .a 2067 to 2777 3 to 709       707/716
(98 %)
6 diff
(99.2 %id)
BU618464 Cell Line, Chondrosarcoma .a 2079 to 2668 1 to 591     Submitted on the opposite strand 591/591
(100 %)
12 diff
(98.0 %id)
AW301288 Kidney .a 2091 to 2545 1 to 455     Submitted on the opposite strand 455/455
(100 %)
5 diff
(99.0 %id)
AA001097.
matches multiple genes
eye, retina .a 2092 to 2433 342 to 1   tiling clone, Submitted on the opposite strand, also hits gene DHFRP1 342/342
(100 %)
5 diff
(98.6 %id)
BE393437.
matches multiple genes
endometrium, adenocarcinoma cell line, uterus .a 2096 to 2625 1 to 543   tiling clone, also hits gene DHFRP1 543/694
(78 %)
34 diff
(95.2 %id)
BG497976 adenocarcinoma, Prostate .a 2100 to 2862 1 to 772       772/816
(94 %)
54 diff
(93.4 %id)
CN312014 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2132 to 2866 1 to 736       736/738
(99 %)
4 diff
(99.5 %id)
BQ671948 epidermoid carcinoma, cell line, salivary gland .a 2133 to 2931 1 to 807       807/881
(91 %)
12 diff
(98.7 %id)
BG494342 lung, mucoepidermoid carcinoma .a 2158 to 2887 1 to 738       738/927
(79 %)
28 diff
(97.0 %id)
BF218981 brain, glioblastoma .a 2159 to 2767 1 to 608       608/609
(99 %)
9 diff
(98.6 %id)
BQ425504 melanotic melanoma, skin .a 2162 to 2935 1 to 780       780/827
(94 %)
13 diff
(98.5 %id)
AI254218 colon, moderately-differentiated adenocarcinoma .a 2172 to 2489 321 to 1       321/321
(100 %)
3 diff
(99.1 %id)
H52043.
matches multiple genes
liver and spleen .a 2244 to 2485 248 to 5     also hits gene DHFRP1 244/248
(98 %)
0 diff
(100 %id)
BG292512 bladder, transitional cell papilloma, cell line .a 2255 to 3010 1 to 768   tiling clone,   768/1149
(66 %)
37 diff
(96.8 %id)
CF140645.
matches multiple genes
CNCAP(3)T-225 cell line, Prostate .a 2266 to 2693 8 to 435   tiling clone, also hits gene DHFRP1 428/435
(98 %)
6 diff
(98.7 %id)
AA135018.
matches multiple genes
colon, tumor .a 2286 to 2642 1 to 357   tiling clone, also hits gene DHFRP1 357/357
(100 %)
13 diff
(96.4 %id)
DA569018.
matches multiple genes
whole embryo, mainly head .a 2295 to 3127 29 to 856   tiling clone, capped also hits gene DHFRP1 828/855
(96 %)
6 diff
(99.3 %id)
BM479366 duodenal adenocarcinoma, cell line, small intestine .a 2303 to 3010 1 to 711       711/1168
(60 %)
16 diff
(98.7 %id)
DA570109.
matches multiple genes
whole embryo, mainly head .a 2368 to 3249 2 to 881   capped also hits gene DHFRP1 880/880
(100 %)
7 diff
(99.3 %id)
BQ676457 melanotic melanoma, cell line, skin .a 2369 to 3201 1 to 839       839/842
(99 %)
20 diff
(97.7 %id)
BU168890.
matches multiple genes
melanotic melanoma, cell line, skin .a 2369 to 3283 1 to 919     also hits gene DHFRP1 919/930
(98 %)
28 diff
(97.0 %id)
CB162469.
matches multiple genes
Liver .a 2388 to 2960 6 to 577     also hits gene DHFRP1 572/577
(99 %)
6 diff
(99.0 %id)
W03820.
matches multiple genes
liver and spleen .a 2444 to 2902 12 to 472     also hits gene DHFRP1 461/472
(97 %)
6 diff
(98.8 %id)
BY995818.
matches multiple genes
  .a 2444 to 3107 1 to 665   tiling clone, also hits gene DHFRP1 665/665
(100 %)
11 diff
(98.4 %id)
H79645.
matches multiple genes
liver and spleen .a 2446 to 2829 1 to 390     also hits gene DHFRP1 390/401
(97 %)
11 diff
(97.3 %id)
AA135949 colon, tumor .a 2451 to 2817 1 to 376       376/376
(100 %)
22 diff
(94.2 %id)
BP207888 coronary artery .a 2459 to 3041 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
BQ276885 mixed (pool of 40 RNAs) .a 2471 to 3242 1 to 775       775/906
(85 %)
19 diff
(98.0 %id)
CD722917 eye, lacrimal gland .a 2485 to 3104 1 to 621       621/621
(100 %)
7 diff
(98.9 %id)
DA571762.
matches multiple genes
whole embryo, mainly head .a 2499 to 3308 63 to 872   capped also hits gene DHFRP1 810/871
(92 %)
13 diff
(98.6 %id)
BG492408 lung, mucoepidermoid carcinoma .a 2512 to 3028 1 to 518       518/519
(99 %)
7 diff
(98.7 %id)
BE566659 bladder, carcinoma, cell line .a 2527 to 3057 1 to 536       536/573
(93 %)
15 diff
(97.4 %id)
BF570033.
matches multiple genes
Kidney, renal carcinoma (ascites) .a 2540 to 3199 682 to 13     also hits gene DHFRP1 670/975
(68 %)
33 diff
(96.7 %id)
TI_154150981   .a 2577 to 3205 705 to 80     Submitted on the opposite strand 626/629
(99 %)
21 diff
(96.7 %id)
CX759233.
matches multiple genes
Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 2600 to 3258 692 to 35     also hits gene DHFRP1 658/720
(91 %)
0 diff
(100 %id)
BX371594 Placenta Cot 25-normalized .a 2605 to 3337 733 to 1   tiling clone,   733/899
(81 %)
5 diff
(99.5 %id)
TI_154166658.
matches multiple genes
  .a 2612 to 3284 764 to 89     Submitted on the opposite strand, also hits gene DHFRP1 676/804
(84 %)
0 diff
(100 %id)
CN312018 embryonic stem cells, cell lines H1, H7, andH9 .a 2613 to 3086 20 to 493       474/591
(80 %)
2 diff
(99.7 %id)
CX163551 human embryonic stem cells differentiated toan early endodermal cell type .a 2617 to 3278 679 to 18     Submitted on the opposite strand 662/679
(97 %)
0 diff
(100 %id)
BU621696 cell lines, Chondrosarcoma .a 2622 to 3281 660 to 1       660/663
(99 %)
3 diff
(99.6 %id)
CA424783 cell lines, Chondrosarcoma .a 2630 to 3281 652 to 1       652/652
(100 %)
1 diff
(99.9 %id)
CV802177 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 2633 to 3283 653 to 3     Submitted on the opposite strand 651/735
(88 %)
0 diff
(100 %id)
CN311997 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2636 to 3263 1 to 629   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 629/629
(100 %)
5 diff
(99.3 %id)
AA281033.
matches multiple genes
germinal center B cell .a 2638 to 2900 1 to 264     also hits gene DHFRP1 264/264
(100 %)
1 diff
(99.7 %id)
BF204108.
matches multiple genes
muscle, rhabdomyosarcoma .a 2642 to 3214 1 to 573     also hits gene DHFRP1 573/576
(99 %)
2 diff
(99.7 %id)
AW951651.
matches multiple genes
  .a 2643 to 3088 1 to 448     also hits gene DHFRP1 448/448
(100 %)
3 diff
(99.4 %id)
BI711402 insulinoma, Pancreas .a 2650 to 3223 574 to 1       574/580
(98 %)
2 diff
(99.7 %id)
W07757 lung .a 2652 to 3149 1 to 499   fully sequenced,   499/499
(100 %)
1 diff
(99.8 %id)
AI394460 brain, glioblastoma (pooled) .a 2656 to 3257 600 to 1       600/600
(100 %)
4 diff
(99.4 %id)
CA426991 Bone, Subchondral Bone .a 2657 to 3281 625 to 1       625/625
(100 %)
0 diff
(100 %id)
T28939.
matches multiple genes
blood, white blood cells .a 2668 to 3010 1 to 343     also hits gene DHFRP1 343/346
(99 %)
6 diff
(98.3 %id)
AA447831.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2674 to 3148 1 to 475     also hits gene DHFRP1 475/475
(100 %)
0 diff
(100 %id)
AA557160.
matches multiple genes
breast .a 2685 to 3262 577 to 1     also hits gene DHFRP1 577/577
(100 %)
3 diff
(99.5 %id)
CF137293.
matches multiple genes
lymph .a 2686 to 3284 615 to 17     Submitted on the opposite strand, also hits gene DHFRP1 599/615
(97 %)
0 diff
(100 %id)
DB365467.
matches multiple genes
  .a 2687 to 3263 574 to 1     also hits gene DHFRP1 574/574
(100 %)
10 diff
(98.3 %id)
AA488803.
matches multiple genes
germinal center B cell .a 2688 to 2998 1 to 311     also hits gene DHFRP1 311/311
(100 %)
0 diff
(100 %id)
AI421996.
matches multiple genes
brain, glioblastoma (pooled) .a 2692 to 3257 566 to 1     also hits gene DHFRP1 566/566
(100 %)
3 diff
(99.5 %id)
BE858788 brain, glioblastoma (pooled) .a 2692 to 3257 566 to 1       566/566
(100 %)
0 diff
(100 %id)
BF940121 brain, glioblastoma (pooled) .a 2695 to 3257 563 to 1       563/563
(100 %)
0 diff
(100 %id)
BU940909 mixed (pool of 40 RNAs) .a 2704 to 3267 1 to 567       567/778
(72 %)
8 diff
(99.0 %id)
AA280993.
matches multiple genes
germinal center B cell .a 2706 to 2889 1 to 184     also hits gene DHFRP1 184/185
(99 %)
2 diff
(99.0 %id)
AU152549.
matches multiple genes
  .a 2706 to 3263 559 to 1     also hits gene DHFRP1 559/561
(99 %)
7 diff
(98.8 %id)
BF814298 colon_ins .a 2707 to 3233 17 to 543       527/543
(97 %)
5 diff
(99.1 %id)
BU429801.
matches multiple genes
lymph .a 2722 to 3205 491 to 8     Submitted on the opposite strand, also hits gene DHFRP1 484/491
(98 %)
0 diff
(100 %id)
AU152199.
matches multiple genes
  .a 2724 to 3263 536 to 1     also hits gene DHFRP1 536/537
(99 %)
11 diff
(98.0 %id)
AU151307.
matches multiple genes
  .a 2729 to 3263 535 to 1     also hits gene DHFRP1 535/536
(99 %)
10 diff
(98.2 %id)
TI_154153056   .a 2729 to 3283 647 to 93     Submitted on the opposite strand 555/568
(97 %)
0 diff
(100 %id)
CB853404.
matches multiple genes
Human Lung Epithelial cells, lung .a 2734 to 3232 1 to 499     Submitted on the opposite strand, also hits gene DHFRP1 499/501
(99 %)
7 diff
(98.7 %id)
AA426588.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2736 to 3242 1 to 506     also hits gene DHFRP1 506/507
(99 %)
5 diff
(99.1 %id)
AI096798.
matches multiple genes
brain, glioblastoma (pooled) .a 2750 to 3265 516 to 1     also hits gene DHFRP1 516/516
(100 %)
1 diff
(99.9 %id)
BF244150.
matches multiple genes
brain, glioblastoma .a 2752 to 3221 1 to 469     also hits gene DHFRP1 469/470
(99 %)
3 diff
(99.4 %id)
BU618031 Bone, Subchondral Bone .a 2757 to 3281 525 to 1       525/525
(100 %)
0 diff
(100 %id)
BF439849 brain, glioblastoma (pooled) .a 2776 to 3257 482 to 1       482/482
(100 %)
0 diff
(100 %id)
CK820514.
matches multiple genes
insulinoma, Pancreas .a 2783 to 3006 224 to 1     also hits gene DHFRP1 224/224
(100 %)
0 diff
(100 %id)
BU431179 lymph .a 2785 to 3283 519 to 21     Submitted on the opposite strand 499/530
(94 %)
0 diff
(100 %id)
BG170196.
matches multiple genes
hypernephroma, cell line, Kidney .a 2785 to 3263 1 to 477   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene DHFRP1 477/477
(100 %)
2 diff
(99.6 %id)
BE855847 brain, glioblastoma (pooled) .a 2793 to 3257 465 to 1       465/465
(100 %)
0 diff
(100 %id)
AA423962.
matches multiple genes
  .a 2795 to 3268 474 to 1     also hits gene DHFRP1 474/474
(100 %)
0 diff
(100 %id)
AW024376 Kidney .a 2797 to 3263 467 to 1       467/467
(100 %)
0 diff
(100 %id)
CN312003.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline .a 2799 to 3252 1 to 454     also hits gene DHFRP1 454/454
(100 %)
1 diff
(99.8 %id)
AI626046 colon .a 2799 to 3257 459 to 1       459/459
(100 %)
0 diff
(100 %id)
AI423410 brain, glioblastoma (pooled) .a 2800 to 3257 457 to 1       457/457
(100 %)
4 diff
(99.2 %id)
DB540821 hippocampus .a 2801 to 3257 1 to 457     Submitted on the opposite strand 457/457
(100 %)
0 diff
(100 %id)
AI919237 brain, glioblastoma (pooled) .a 2801 to 3257 457 to 1       457/457
(100 %)
0 diff
(100 %id)
BI334341.
matches multiple genes
cervical carcinoma cell line, cervix .a 2803 to 3530 1 to 729     also hits gene DHFRP1 729/730
(99 %)
8 diff
(99.0 %id)
AI419234 brain, glioblastoma (pooled) .a 2806 to 3257 452 to 1       452/452
(100 %)
0 diff
(100 %id)
BF035584 adenocarcinoma, ovary .a 2806 to 3270 1 to 471       471/471
(100 %)
14 diff
(97.1 %id)
AI138260   .a 2807 to 3267 461 to 1       461/461
(100 %)
0 diff
(100 %id)
DB552022.
matches multiple genes
hippocampus .a 2810 to 3263 1 to 454     Submitted on the opposite strand, also hits gene DHFRP1 454/454
(100 %)
3 diff
(99.4 %id)
DB331546.
matches multiple genes
small intestine .a 2813 to 3263 451 to 1     also hits gene DHFRP1 451/456
(98 %)
4 diff
(99.2 %id)
DB526334.
matches multiple genes
testis .a 2817 to 3262 1 to 446     Submitted on the opposite strand, also hits gene DHFRP1 446/447
(99 %)
2 diff
(99.6 %id)
AA707045.
matches multiple genes
liver and spleen .a 2818 to 3262 445 to 1     also hits gene DHFRP1 445/445
(100 %)
1 diff
(99.8 %id)
AI131169.
matches multiple genes
heart .a 2818 to 3264 447 to 1     also hits gene DHFRP1 447/448
(99 %)
1 diff
(99.8 %id)
AI880434.
matches multiple genes
colon .a 2818 to 3263 446 to 1     also hits gene DHFRP1 446/446
(100 %)
1 diff
(99.8 %id)
AL525513.
matches multiple genes
brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 2819 to 3850 1042 to 22     also hits gene DHFRP1 1021/1051
(97 %)
0 diff
(100 %id)
AI003995.
matches multiple genes
  .a 2822 to 3266 445 to 1     also hits gene DHFRP1 445/445
(100 %)
1 diff
(99.8 %id)
BF435471 sciatic nerve .a 2822 to 3272 451 to 1       451/451
(100 %)
0 diff
(100 %id)
AA134941.
matches multiple genes
colon, tumor .a 2830 to 3266 440 to 1     also hits gene DHFRP1 440/440
(100 %)
5 diff
(98.9 %id)
N73567.
matches multiple genes
liver and spleen .a 2831 to 3258 437 to 1     also hits gene DHFRP1 437/447
(97 %)
12 diff
(97.4 %id)
DB529806.
matches multiple genes
hippocampus .a 2832 to 3263 1 to 434     Submitted on the opposite strand, also hits gene DHFRP1 434/434
(100 %)
15 diff
(96.6 %id)
AI469383 colon, moderately-differentiated adenocarcinoma .a 2832 to 3267 436 to 1       436/436
(100 %)
0 diff
(100 %id)
AI359605 brain, glioblastoma (pooled) .a 2833 to 3257 425 to 1       425/425
(100 %)
0 diff
(100 %id)
DB514204.
matches multiple genes
testis .a 2835 to 3263 1 to 428     Submitted on the opposite strand, also hits gene DHFRP1 428/428
(100 %)
3 diff
(99.3 %id)
DA644716   .a 2839 to 3426 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
AI141920.
matches multiple genes
heart .a 2840 to 3264 425 to 1     also hits gene DHFRP1 425/425
(100 %)
1 diff
(99.8 %id)
H79646.
matches multiple genes
liver and spleen .a 2842 to 3232 408 to 1     also hits gene DHFRP1 408/411
(99 %)
20 diff
(95.2 %id)
AA463389.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2853 to 3096 1 to 245     also hits gene DHFRP1 245/245
(100 %)
1 diff
(99.6 %id)
AI436158.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2859 to 3263 405 to 1     also hits gene DHFRP1 405/405
(100 %)
3 diff
(99.3 %id)
AA292482.
matches multiple genes
germinal center B cell .a 2866 to 3263 398 to 1     also hits gene DHFRP1 398/398
(100 %)
1 diff
(99.8 %id)
AI359154.
matches multiple genes
brain, glioblastoma (pooled) .a 2874 to 3274 401 to 1     also hits gene DHFRP1 401/401
(100 %)
1 diff
(99.8 %id)
BM475716.
matches multiple genes
embryonal carcinoma, cell line, testis .a 2875 to 3853 1 to 1004     also hits gene DHFRP1 1004/1045
(96 %)
47 diff
(95.6 %id)
AI039319.
matches multiple genes
  .a 2876 to 3269 392 to 1     also hits gene DHFRP1 392/392
(100 %)
5 diff
(98.8 %id)
AI695673.
matches multiple genes
Kidney .a 2890 to 3263 375 to 1     also hits gene DHFRP1 375/375
(100 %)
4 diff
(99.0 %id)
AI262751   .a 2895 to 3267 373 to 1       373/373
(100 %)
0 diff
(100 %id)
AI375347 brain, glioblastoma (pooled) .a 2901 to 3257 357 to 1       357/357
(100 %)
0 diff
(100 %id)
AA665122.
matches multiple genes
alveolar rhabdomyosarcoma .a 2910 to 3274 365 to 1     also hits gene DHFRP1 365/366
(99 %)
4 diff
(99.0 %id)
AA932994 Kidney .a 2911 to 3263 353 to 1       353/353
(100 %)
0 diff
(100 %id)
BY797984.
matches multiple genes
eye .a 2914 to 3264 1 to 351     also hits gene DHFRP1 351/351
(100 %)
1 diff
(99.8 %id)
AI909030 breast .a 2916 to 3349 431 to 3       429/495
(86 %)
14 diff
(97.2 %id)
AA348708 brain, hippocampus .a 2928 to 3140 1 to 213       213/213
(100 %)
0 diff
(100 %id)
AI361777.
matches multiple genes
B-cell, chronic lymphotic leukemia .a 2939 to 3439 1 to 500     Submitted on the opposite strand, also hits gene DHFRP1 500/500
(100 %)
1 diff
(99.8 %id)
AW051136.
matches multiple genes
brain, glioblastoma (pooled) .a 2939 to 3257 320 to 1     also hits gene DHFRP1 320/320
(100 %)
2 diff
(99.4 %id)
N80705.
matches multiple genes
lung .a 2944 to 3263 324 to 1     also hits gene DHFRP1 324/326
(99 %)
4 diff
(98.8 %id)
BQ423145 melanotic melanoma, skin .a 2949 to 3738 1 to 792       792/883
(89 %)
9 diff
(99.0 %id)
BF432323 brain, glioblastoma (pooled) .a 2959 to 3257 300 to 1       300/300
(100 %)
2 diff
(99.4 %id)
BQ232604 embryonal carcinoma, cell line, testis .a 2963 to 3485 1 to 532       532/1133
(46 %)
26 diff
(97.8 %id)
DB511482.
matches multiple genes
testis .a 2964 to 3261 9 to 305     Submitted on the opposite strand, also hits gene DHFRP1 297/307
(96 %)
19 diff
(93.9 %id)
BM789839 Ascites, stomach .a 2977 to 3655 1 to 679       679/679
(100 %)
0 diff
(100 %id)
N90189.
matches multiple genes
liver and spleen .a 2998 to 3267 273 to 1   tiling clone, also hits gene DHFRP1 273/322
(84 %)
5 diff
(98.5 %id)
W35248.
matches multiple genes
heart .a 3009 to 3258 1 to 250     also hits gene DHFRP1 250/250
(100 %)
1 diff
(99.6 %id)
BX335663 Placenta Cot 25-normalized .a 3020 to 3873 862 to 1       862/1006
(85 %)
33 diff
(96.8 %id)
AI381187   .a 3023 to 3263 241 to 1       241/241
(100 %)
0 diff
(100 %id)
AW026548 brain, glioblastoma (pooled) .a 3025 to 3546 522 to 1       522/522
(100 %)
1 diff
(99.9 %id)
BC009634 Lung, carcinoma, large cellundifferentiated. .a 3027 to 3908 1 to 881   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 881/881
(100 %)
1 diff
(99.9 %id)
AI269216.
matches multiple genes
Kidney .a 3054 to 3263 210 to 1     also hits gene DHFRP1 210/210
(100 %)
3 diff
(98.6 %id)
AA810671 germinal center B cell .a 3070 to 3272 203 to 1       203/203
(100 %)
0 diff
(100 %id)
AA907381 carcinoid, lung .a 3071 to 3263 193 to 1       193/193
(100 %)
0 diff
(100 %id)
CN312004 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 3096 to 3680 1 to 584       584/584
(100 %)
6 diff
(99.0 %id)
AI093037 heart .a 3109 to 3549 438 to 1       438/438
(100 %)
2 diff
(99.6 %id)
AA853193 Bone, Hip .a 3109 to 3241 8 to 140       133/140
(95 %)
6 diff
(95.8 %id)
AA135396 colon, tumor .a 3118 to 3265 148 to 1       148/148
(100 %)
4 diff
(97.3 %id)
N80696 lung .a 3119 to 3263 146 to 1   fully sequenced,   146/146
(100 %)
1 diff
(99.4 %id)
DB355602.
matches multiple genes
whole embryo, mainly head .a 3357 to 3908 562 to 1     also hits gene DHFRP1 562/571
(98 %)
20 diff
(96.5 %id)
DB356846.
matches multiple genes
whole embryo, mainly head .a 3357 to 3908 551 to 1     also hits gene DHFRP1 551/555
(99 %)
3 diff
(99.5 %id)
DB358651.
matches multiple genes
whole embryo, mainly head .a 3395 to 3908 521 to 1     also hits gene DHFRP1 521/548
(95 %)
19 diff
(96.6 %id)
BG111619 Bone, osteosarcoma, cell line .a 3462 to 3561 508 to 613   AAA   510/1078
(47 %)
22 diff
(98.0 %id)
AA447680.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3575 to 3908 334 to 1     also hits gene DHFRP1 334/334
(100 %)
0 diff
(100 %id)
CD014129   .b 1 to 1719 1 to 1718 exact tiling clone,   1718/1718
(100 %)
8 diff
(99.6 %id)
BQ424279 eye, retinoblastoma .b 335 to 1189 1 to 862   tiling clone,   862/866
(99 %)
10 diff
(98.9 %id)
AA974401 pooled germ cell tumors .b 745 to 978 234 to 1       234/234
(100 %)
0 diff
(100 %id)
BM151558 leukopheresis .c 1 to 545 1 to 544 E31Y G32C G151C N172K D173I tiling clone,   544/544
(100 %)
8 diff
(98.6 %id)
DA478881   .d 1 to 570 2 to 571 exact tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
DC297800.
matches multiple genes
  .e 1 to 572 1 to 572     This clone was ignored, also hits gene DHFRP1 572/572
(100 %)
1 diff
(99.9 %id)
AK293146   .e 1 to 1448 1 to 1448 exact tiling clone,   1448/1448
(100 %)
1 diff
(100.0 %id)
BM787874.
matches multiple genes
stomach .e 2 to 647 1 to 646 exact   This clone was ignored, also hits gene DHFRP1 646/646
(100 %)
0 diff
(100 %id)
DB077930 testis .f-u 1 to 560 2 to 561   tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
AA251122 germinal center B cell .f-u 159 to 215 1 to 57     Submitted on the opposite strand 57/60
(95 %)
1 diff
(98.4 %id)
AK297302 brain .g 1 to 1474 1 to 1474 exact tiling clone,   1474/1474
(100 %)
1 diff
(100.0 %id)
DC350896.
matches multiple genes
brain .g 1 to 582 1 to 581 exact   Suspected internal deletion, this clone was ignored, also hits gene DHFRP1 581/581
(100 %)
1 diff
(99.9 %id)
AK308492   .h 1 to 995 1 to 995 exact tiling clone,   995/995
(100 %)
1 diff
(99.9 %id)
DC299875.
matches multiple genes
  .h 1 to 570 1 to 571 exact   Suspected internal deletion, suspected internal deletion, this clone was ignored, also hits gene DHFRP1 571/571
(100 %)
2 diff
(99.7 %id)
BM969457 lung, Primary Lung Epithelial Cells .i-u 1 to 592 1 to 591 exact tiling clone, Submitted on the opposite strand 591/610
(96 %)
4 diff
(99.4 %id)
BU942165 mixed (pool of 40 RNAs) .i-u 12 to 716 1 to 718 exact tiling clone,   718/762
(94 %)
20 diff
(97.4 %id)
BU959476 mixed (pool of 40 RNAs) .i-u 12 to 483 1 to 474 exact     474/495
(95 %)
5 diff
(99.0 %id)
TI_149279254.
matches multiple genes
  .i-u 17 to 592 53 to 627 exact tiling clone, Submitted on the opposite strand, also hits gene DHFRP1 575/766
(75 %)
5 diff
(99.4 %id)
AW059615.
matches multiple genes
  .i-u 24 to 103 1 to 80     also hits gene DHFRP1 80/80
(100 %)
0 diff
(100 %id)
CN312017 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .i-u 41 to 586 1 to 547 C42W     547/547
(100 %)
9 diff
(98.4 %id)
BE766051 nervous_tumor .i-u 84 to 266 1 to 183       183/183
(100 %)
0 diff
(100 %id)
BE765903.
matches multiple genes
nervous_tumor .i-u 105 to 266 162 to 1   tiling clone, also hits gene DHFRP1 162/167
(97 %)
0 diff
(100 %id)
AA648876.
matches multiple genes
germinal center B cell .i-u 111 to 519 406 to 1 Y8F E13G   also hits gene DHFRP1 406/470
(86 %)
41 diff
(91.3 %id)
BF735352.
matches multiple genes
amnion_normal .i-u 112 to 484 430 to 56 S23A Y31*   Submitted on the opposite strand, also hits gene DHFRP1 375/432
(86 %)
0 diff
(100 %id)
BE827830.
matches multiple genes
lung_tumor .i-u 120 to 274 169 to 14     also hits gene DHFRP1 156/169
(92 %)
0 diff
(100 %id)
CN312009.
matches multiple genes
embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .i-u 126 to 738 613 to 1 H30P   Submitted on the opposite strand, also hits gene DHFRP1 613/613
(100 %)
1 diff
(99.9 %id)
BG029463 breast, mammary adenocarcinoma, cell line .i-u 134 to 734 1 to 607 exact tiling clone, AAA   607/624
(97 %)
16 diff
(97.5 %id)
BM704123 eye, Retina Foveal and Macular .i-u 145 to 534 1 to 390 exact fully sequenced, Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 390/390
(100 %)
0 diff
(100 %id)
BE071304.
matches multiple genes
breast .i-u 156 to 559 407 to 1 K11E E37A C42S   Submitted on the opposite strand, also hits gene DHFRP1 407/415
(98 %)
13 diff
(96.9 %id)
AA651836.
matches multiple genes
germinal center B cell .i-u 186 to 488 303 to 1 exact   also hits gene DHFRP1 303/303
(100 %)
2 diff
(99.4 %id)
BE673552.
matches multiple genes
Prostate .i-u 195 to 530 336 to 1 D16H   also hits gene DHFRP1 336/336
(100 %)
1 diff
(99.8 %id)
AA129464 uterus .i-u 197 to 488 1 to 292 exact fully sequenced, Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 292/292
(100 %)
0 diff
(100 %id)
AV681698.
matches multiple genes
hepatocellular carcinoma .i-u 202 to 577 1 to 378 H30P AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene DHFRP1 378/378
(100 %)
5 diff
(98.7 %id)
AI830697.
matches multiple genes
lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .i-u 202 to 747 546 to 1 exact   also hits gene DHFRP1 546/546
(100 %)
1 diff
(99.9 %id)
BQ304258 breast .i-u 205 to 585 3 to 385 exact     383/393
(97 %)
4 diff
(99.0 %id)
BQ304259.
matches multiple genes
breast .i-u 205 to 576 22 to 395 exact   also hits gene DHFRP1 374/395
(94 %)
6 diff
(98.5 %id)
AA742541 pooled germ cell tumors .i-u 252 to 537 286 to 1 exact     286/286
(100 %)
0 diff
(100 %id)
AI061616 Liver .i-u 289 to 633 272 to 617       346/617
(56 %)
6 diff
(99.1 %id)
AA463881.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .i-u 298 to 749 452 to 1     also hits gene DHFRP1, POT1 452/452
(100 %)
1 diff
(99.8 %id)
AI186480.
matches multiple genes
placenta .i-u 327 to 750 424 to 1     also hits gene DHFRP1 424/424
(100 %)
2 diff
(99.6 %id)
AI635482.
matches multiple genes
Kidney, renal cell tumor .i-u 327 to 750 424 to 1   tiling clone, also hits gene DHFRP1 424/424
(100 %)
1 diff
(99.8 %id)
AA749344 germinal center B cell .i-u 417 to 748 361 to 30   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 332/332
(100 %)
0 diff
(100 %id)
AI184392.
matches multiple genes
placenta .i-u 437 to 750 314 to 1     also hits gene DHFRP1 314/314
(100 %)
1 diff
(99.7 %id)
BU943541 mixed (pool of 40 RNAs) .i-u 440 to 749 1 to 310       310/800
(38 %)
2 diff
(99.8 %id)
AA129465 uterus .i-u 458 to 748 308 to 18   fully sequenced, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 291/291
(100 %)
0 diff
(100 %id)
H94631.
matches multiple genes
placenta .i-u 460 to 729 271 to 1     also hits gene DHFRP1 271/271
(100 %)
1 diff
(99.7 %id)
BU730021 eye, Retina Foveal and Macular .i-u 504 to 748 260 to 16   fully sequenced, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 245/245
(100 %)
0 diff
(100 %id)
BQ437128.
matches multiple genes
leiomyosarcoma, uterus .i-u 553 to 748 12 to 209   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene DHFRP1 198/209
(94 %)
6 diff
(97.2 %id)
AJ711655.
matches multiple genes
heart .i-u 625 to 748 1 to 124   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene DHFRP1 124/124
(100 %)
0 diff
(100 %id)
EC455651.
matches multiple genes
Prostate .i-u 678 to 746 1 to 70     also hits gene DHFRP1 70/70
(100 %)
1 diff
(98.6 %id)
DN917125   .j 1 to 582 581 to 1 V15* tiling clone,   581/581
(100 %)
4 diff
(99.4 %id)
DN916221   .j 31 to 582 550 to 1   tiling clone,   550/557
(98 %)
5 diff
(99.2 %id)
CN311999.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 P1.a-u -11 to 732 1 to 744 exact   also hits gene DHFRP1 744/744
(100 %)
4 diff
(99.5 %id)
DA505790.
matches multiple genes
brain P1.a-u -11 to 556 2 to 569   capped also hits gene DHFRP1 568/568
(100 %)
0 diff
(100 %id)
AA252991.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus P1.a-u -11 to 46 1 to 58     also hits gene DHFRP1 58/58
(100 %)
0 diff
(100 %id)
BU177294.
matches multiple genes
melanotic melanoma, skin P1.a-u -8 to 883 1 to 895 exact tiling clone, also hits gene DHFRP1 895/895
(100 %)
9 diff
(99.0 %id)
BU941838.
matches multiple genes
mixed (pool of 40 RNAs) P1.a-u -8 to 754 1 to 773 V113L   also hits gene DHFRP1 773/784
(98 %)
20 diff
(97.5 %id)
CN312015.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 P1.a-u 1 to 597 20 to 615 exact   also hits gene DHFRP1 604/615
(98 %)
6 diff
(99.1 %id)
BG248108.
matches multiple genes
adenocarcinoma cell line, colon P1.a-u 1 to 672 9 to 678 F135C L154W E155R K156N Y157I ...   also hits gene DHFRP1 678/964
(70 %)
21 diff
(97.9 %id)
BM833910.
matches multiple genes
stomach P1.a-u 1 to 599 9 to 607 exact   also hits gene DHFRP1 607/607
(100 %)
0 diff
(100 %id)
DA479430.
matches multiple genes
  P1.a-u 1 to 551 9 to 559   capped also hits gene DHFRP1 558/558
(100 %)
0 diff
(100 %id)
DA484689.
matches multiple genes
brain P1.a-u 1 to 550 9 to 558   capped also hits gene DHFRP1 557/557
(100 %)
0 diff
(100 %id)
DA996891.
matches multiple genes
  P1.a-u 1 to 535 9 to 544   capped also hits gene DHFRP1 543/543
(100 %)
1 diff
(99.9 %id)
DB016890.
matches multiple genes
esophageal, tumor tissue P1.a-u 1 to 558 9 to 565   capped also hits gene DHFRP1 564/564
(100 %)
1 diff
(99.9 %id)
BC070280.
matches multiple genes
Pooled, 40 cell lines P1.a-u 1 to 931 7 to 937 V113L available from MGC, AAA also hits gene DHFRP1 937/937
(100 %)
3 diff
(99.7 %id)
DB460934.
matches multiple genes
testis P1.a-u 1 to 467 7 to 473     also hits gene DHFRP1 473/473
(100 %)
0 diff
(100 %id)
AU104220.
matches multiple genes
  P1.a-u 1 to 44 7 to 50     also hits gene DHFRP1 50/50
(100 %)
1 diff
(98.0 %id)
BP239339.
matches multiple genes
Liver P1.a-u 1 to 499 7 to 508     also hits gene DHFRP1 508/607
(83 %)
18 diff
(97.1 %id)
BE250809.
matches multiple genes
eye, retinoblastoma P1.a-u 1 to 539 7 to 545     also hits gene DHFRP1 545/545
(100 %)
0 diff
(100 %id)
BF668069.
matches multiple genes
brain, primitive neuroectoderm P1.a-u 1 to 654 7 to 653 G175A I176L K177S Y178T K179N ...   also hits gene DHFRP1 653/894
(73 %)
15 diff
(98.4 %id)
DA005949.
matches multiple genes
  P1.a-u 1 to 553 7 to 559   capped also hits gene DHFRP1 558/558
(100 %)
1 diff
(99.9 %id)
DA005952.
matches multiple genes
  P1.a-u 1 to 554 7 to 560   capped also hits gene DHFRP1 559/559
(100 %)
0 diff
(100 %id)
AK312642.
matches multiple genes
  P1.a-u 1 to 595 6 to 600 exact   also hits gene DHFRP1 600/600
(100 %)
0 diff
(100 %id)
AV714645.
matches multiple genes
  P1.a-u 1 to 639 6 to 644 S120F   also hits gene DHFRP1 644/644
(100 %)
3 diff
(99.6 %id)
BE252613.
matches multiple genes
eye, retinoblastoma P1.a-u 1 to 594 6 to 598     also hits gene DHFRP1 598/598
(100 %)
1 diff
(99.9 %id)
DA000893.
matches multiple genes
  P1.a-u 1 to 494 6 to 499   capped also hits gene DHFRP1 498/498
(100 %)
0 diff
(100 %id)
BE253372.
matches multiple genes
eye, retinoblastoma P1.a-u 1 to 628 5 to 627 G117V G118A S119V S120L V121F ...   also hits gene DHFRP1 627/630
(99 %)
8 diff
(98.8 %id)
DA609772.
matches multiple genes
  P1.a-u 1 to 563 6 to 568   capped also hits gene DHFRP1 567/568
(99 %)
1 diff
(99.9 %id)
DA913886.
matches multiple genes
  P1.a-u 1 to 556 6 to 561   capped also hits gene DHFRP1 560/560
(100 %)
0 diff
(100 %id)
DB096212.
matches multiple genes
testis P1.a-u 1 to 555 4 to 558   capped also hits gene DHFRP1 557/557
(100 %)
0 diff
(100 %id)
BE887227.
matches multiple genes
leiomyosarcoma, uterus P1.a-u 1 to 698 2 to 705 G175A I176L K177S Y178T K179N ...   also hits gene DHFRP1 705/935
(75 %)
19 diff
(98.0 %id)
DA665388.
matches multiple genes
  P1.a-u 1 to 542 2 to 543   capped also hits gene DHFRP1 542/542
(100 %)
0 diff
(100 %id)
BU569023.
matches multiple genes
testis P1.a-u 2 to 758 1 to 772 E172X   also hits gene DHFRP1 772/823
(93 %)
25 diff
(97.0 %id)
BE563920.
matches multiple genes
bone marrow, from chronic myelogenous leukemia P1.a-u 3 to 483 1 to 486     also hits gene DHFRP1 486/729
(66 %)
14 diff
(98.1 %id)
BX356815.
matches multiple genes
Placenta Cot 25-normalized P1.a-u 4 to 1037 1 to 1033 W58G F59S S60P I61F P62L ...   also hits gene DHFRP1 1033/1053
(98 %)
37 diff
(96.5 %id)
BG497327.
matches multiple genes
lung, mucoepidermoid carcinoma P1.a-u 4 to 655 1 to 659 K185N N186D D187M   also hits gene DHFRP1 659/663
(99 %)
15 diff
(97.8 %id)
BG528145.
matches multiple genes
lung, mucoepidermoid carcinoma P1.a-u 4 to 665 1 to 661 P150S E151R I152N D153*   also hits gene DHFRP1 661/664
(99 %)
9 diff
(98.7 %id)
T29009.
matches multiple genes
blood, white blood cells P1.a-u 4 to 302 1 to 299     also hits gene DHFRP1 299/299
(100 %)
0 diff
(100 %id)
BE391734.
matches multiple genes
endometrium, adenocarcinoma cell line, uterus P1.a-u 7 to 654 35 to 683 R138Q I139D M140H Q141A D142R ...   also hits gene DHFRP1 649/722
(89 %)
32 diff
(95.6 %id)
BX280293.
matches multiple genes
liver and spleen P1.a-u 8 to 486 1 to 479     also hits gene DHFRP1 479/479
(100 %)
1 diff
(99.8 %id)
BX364783.
matches multiple genes
Placenta Cot 25-normalized P1.a-u 8 to 920 1 to 911 exact tiling clone, also hits gene DHFRP1 911/915
(99 %)
4 diff
(99.6 %id)
R01547.
matches multiple genes
liver and spleen P1.a-u 9 to 312 1 to 315     also hits gene DHFRP1 315/341
(92 %)
16 diff
(95.4 %id)
BF306741.
matches multiple genes
muscle, rhabdomyosarcoma P1.a-u 9 to 739 1 to 723 V2G L154W E155R K156N Y157I ...   also hits gene DHFRP1 723/727
(99 %)
17 diff
(97.7 %id)
DB446350.
matches multiple genes
testis P1.a-u 11 to 467 1 to 457     also hits gene DHFRP1 457/457
(100 %)
1 diff
(99.8 %id)
BF212572.
matches multiple genes
bone marrow, from chronic myelogenous leukemia P1.a-u 11 to 662 1 to 661 V44D E45R G46R K47*   also hits gene DHFRP1 661/922
(71 %)
40 diff
(95.7 %id)
BF184269.
matches multiple genes
bone marrow, from chronic myelogenous leukemia P1.a-u 11 to 642 1 to 628 K177Q F180L E181K V182Y Y183M ...   also hits gene DHFRP1 628/826
(76 %)
9 diff
(99.0 %id)
BP244131.
matches multiple genes
Liver P1.a-u 17 to 586 1 to 570     also hits gene DHFRP1 570/570
(100 %)
7 diff
(98.8 %id)
DA004007.
matches multiple genes
  P1.a-u 24 to 546 2 to 524   capped also hits gene DHFRP1 523/523
(100 %)
0 diff
(100 %id)
BE397236.
matches multiple genes
Burkitt lymphoma, lymph P1.a-u 24 to 647 1 to 626 K99Q P150Q E151K I152L L154S ...   also hits gene DHFRP1 626/627
(99 %)
16 diff
(97.5 %id)
BF132819.
matches multiple genes
lung, mucoepidermoid carcinoma P1.a-u 24 to 738 1 to 699 L154W E155R K156N Y157I K158N ...   also hits gene DHFRP1 699/875
(79 %)
24 diff
(97.3 %id)
DB151427.
matches multiple genes
thymus P1.a-u 27 to 593 2 to 568   capped also hits gene DHFRP1 567/567
(100 %)
0 diff
(100 %id)
BE909845.
matches multiple genes
epithelioid carcinoma, Pancreas P1.a-u 29 to 809 1 to 783 exact   also hits gene DHFRP1 783/917
(85 %)
31 diff
(96.7 %id)
BQ228528.
matches multiple genes
embryonal carcinoma, cell line, testis P1.a-u 31 to 771 1 to 751 exact   also hits gene DHFRP1 751/1147
(65 %)
18 diff
(98.5 %id)
CV025588.
matches multiple genes
mixed P1.a-u 32 to 594 1 to 563     also hits gene DHFRP1 563/640
(87 %)
3 diff
(99.6 %id)
EU145592.
matches multiple genes
  P1.a-u 32 to 595 1 to 564 exact   also hits gene DHFRP1 564/564
(100 %)
0 diff
(100 %id)
V00507.
matches multiple genes
  P1.a-u 32 to 595 1 to 564 exact   also hits gene DHFRP1 564/564
(100 %)
0 diff
(100 %id)
BE780925.
matches multiple genes
eye, retinoblastoma P1.a-u 34 to 394 1 to 361     also hits gene DHFRP1 361/362
(99 %)
1 diff
(99.8 %id)
BY994673.
matches multiple genes
  P1.a-u 34 to 658 8 to 632     also hits gene DHFRP1 625/632
(98 %)
6 diff
(99.1 %id)
BG328723.
matches multiple genes
adenocarcinoma cell line, colon P1.a-u 37 to 600 1 to 564     also hits gene DHFRP1 564/564
(100 %)
0 diff
(100 %id)
AA314334.
matches multiple genes
colon P1.a-u 38 to 429 1 to 393     also hits gene DHFRP1 393/393
(100 %)
3 diff
(99.3 %id)
CN312011.
matches multiple genes
embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells P1.a-u 39 to 765 1 to 727     also hits gene DHFRP1 727/727
(100 %)
2 diff
(99.8 %id)
DA448844.
matches multiple genes
tongue, tumor tissue P1.a-u 47 to 596 2 to 551   capped also hits gene DHFRP1 550/550
(100 %)
0 diff
(100 %id)
BE295309.
matches multiple genes
muscle, rhabdomyosarcoma P1.a-u 54 to 761 1 to 700     also hits gene DHFRP1 700/749
(93 %)
18 diff
(97.6 %id)
BE617318.
matches multiple genes
adenocarcinoma, colon P1.a-u 63 to 805 1 to 731     also hits gene DHFRP1 731/954
(76 %)
12 diff
(98.8 %id)
BE883650.
matches multiple genes
leiomyosarcoma, uterus P1.a-u 67 to 833 1 to 758     also hits gene DHFRP1 758/936
(80 %)
35 diff
(96.3 %id)
CN312000.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 P1.a-u 73 to 732 1 to 658     also hits gene DHFRP1 658/658
(100 %)
2 diff
(99.7 %id)
CN312013.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 P1.a-u 86 to 510 1 to 425     also hits gene DHFRP1 425/425
(100 %)
2 diff
(99.6 %id)
BQ650068.
matches multiple genes
hepatocellular carcinoma, cell line, Liver P1.a-u 101 to 678 1 to 578   AAA also hits gene DHFRP1 578/578
(100 %)
0 diff
(100 %id)
BQ644196.
matches multiple genes
hepatocellular carcinoma, cell line, Liver P1.a-u 101 to 678 1 to 578   AAA also hits gene DHFRP1 578/578
(100 %)
0 diff
(100 %id)
BG387847.
matches multiple genes
embryonal carcinoma, cell line, testis P1.a-u 150 to 897 1 to 739     also hits gene DHFRP1 739/936
(78 %)
21 diff
(97.8 %id)
TI_1948089340.
matches multiple genes
  P1.a-u 244 to 594 477 to 127     also hits gene DHFRP1 351/378
(92 %)
0 diff
(100 %id)
BU630686.
matches multiple genes
cell lines, Chondrosarcoma P1.a-u 341 to 924 603 to 19   AAA also hits gene DHFRP1 585/585
(100 %)
2 diff
(99.7 %id)
BG113084.
matches multiple genes
Bone, osteosarcoma, cell line P1.a-u 342 to 973 1 to 655     also hits gene DHFRP1 655/951
(68 %)
49 diff
(94.9 %id)
DB162789.
matches multiple genes
thymus P1.a-u 394 to 987 2 to 596   tiling clone, capped also hits gene DHFRP1 595/595
(100 %)
4 diff
(99.4 %id)
H25209.
matches multiple genes
whole brain P1.a-u 429 to 732 1 to 304     Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base), also hits gene DHFRP1 304/304
(100 %)
1 diff
(99.7 %id)
AW013865.
matches multiple genes
  P1.a-u 429 to 920 509 to 18   AAA also hits gene DHFRP1 492/492
(100 %)
2 diff
(99.6 %id)
DB576293.
matches multiple genes
hypothalamus P1.a-u 435 to 928 1 to 494     Submitted on the opposite strand, also hits gene DHFRP1 494/495
(99 %)
3 diff
(99.4 %id)
BM719920.
matches multiple genes
eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid P1.a-u 447 to 931 499 to 15   AAA Submitted on the opposite strand, also hits gene DHFRP1 485/485
(100 %)
2 diff
(99.6 %id)
EH339491.
matches multiple genes
  P1.a-u 448 to 526 1 to 79     also hits gene DHFRP1 79/79
(100 %)
0 diff
(100 %id)
DB576543.
matches multiple genes
hypothalamus P1.a-u 466 to 928 1 to 463     Submitted on the opposite strand, also hits gene DHFRP1 463/464
(99 %)
3 diff
(99.4 %id)
BU860694.
matches multiple genes
mixed (pool of 40 RNAs) P1.a-u 517 to 935 1 to 420     also hits gene DHFRP1 420/448
(93 %)
4 diff
(99.2 %id)
TI_154152235.
matches multiple genes
  P1.a-u 534 to 1064 81 to 617     also hits gene DHFRP1 537/648
(82 %)
6 diff
(99.1 %id)
DB510662.
matches multiple genes
testis P1.a-u 584 to 929 1 to 346     Submitted on the opposite strand, also hits gene DHFRP1 346/348
(99 %)
3 diff
(99.2 %id)
AI131225.
matches multiple genes
heart P1.a-u 590 to 930 341 to 1     also hits gene DHFRP1 341/341
(100 %)
2 diff
(99.5 %id)
T91344.
matches multiple genes
liver and spleen P1.a-u 614 to 917 304 to 1     also hits gene DHFRP1 304/306
(99 %)
3 diff
(99.1 %id)
AA694127.
matches multiple genes
liver and spleen P1.a-u 616 to 931 333 to 18   AAA also hits gene DHFRP1 316/316
(100 %)
3 diff
(99.1 %id)
AA700469.
matches multiple genes
liver and spleen P1.a-u 616 to 930 315 to 1     also hits gene DHFRP1 315/315
(100 %)
2 diff
(99.4 %id)
AA699792.
matches multiple genes
liver and spleen P1.a-u 616 to 931 316 to 1     also hits gene DHFRP1 316/316
(100 %)
2 diff
(99.4 %id)
AA682438.
matches multiple genes
liver and spleen P1.a-u 616 to 903 286 to 1     also hits gene DHFRP1 286/286
(100 %)
8 diff
(97.3 %id)
AA252992.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus P1.a-u 616 to 931 329 to 14   AAA also hits gene DHFRP1 316/316
(100 %)
3 diff
(99.1 %id)
AA401306.
matches multiple genes
  P1.a-u 616 to 933 320 to 3     also hits gene DHFRP1 318/320
(99 %)
0 diff
(100 %id)
AI090860.
matches multiple genes
  P1.a-u 616 to 933 322 to 5     also hits gene DHFRP1 318/322
(98 %)
0 diff
(100 %id)
AI040147.
matches multiple genes
  P1.a-u 616 to 933 320 to 3     also hits gene DHFRP1 318/320
(99 %)
0 diff
(100 %id)
AI040148.
matches multiple genes
  P1.a-u 616 to 933 322 to 5     also hits gene DHFRP1 318/322
(98 %)
0 diff
(100 %id)
AI187739.
matches multiple genes
  P1.a-u 616 to 930 318 to 4     also hits gene DHFRP1 315/319
(98 %)
0 diff
(100 %id)
AI332971.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus P1.a-u 616 to 933 319 to 2     also hits gene DHFRP1 318/319
(99 %)
0 diff
(100 %id)
AI352150.
matches multiple genes
  P1.a-u 616 to 933 325 to 8     also hits gene DHFRP1 318/325
(97 %)
0 diff
(100 %id)
BF439092.
matches multiple genes
pooled P1.a-u 616 to 933 318 to 1     also hits gene DHFRP1 318/318
(100 %)
2 diff
(99.4 %id)
AA455309.
matches multiple genes
germinal center B cell P1.a-u 617 to 919 1 to 303     also hits gene DHFRP1 303/303
(100 %)
1 diff
(99.7 %id)
CN312006.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 P1.a-u 863 to 1445 17 to 599   tiling clone, also hits gene DHFRP1 583/599
(97 %)
6 diff
(99.0 %id)
DB176478.
matches multiple genes
kidney, tumor tissue P1.a-u 993 to 1557 2 to 566   capped also hits gene DHFRP1 565/565
(100 %)
7 diff
(98.8 %id)
CN312007.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 P1.a-u 997 to 1481 1 to 485     also hits gene DHFRP1 485/485
(100 %)
3 diff
(99.4 %id)
CN312002.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 P1.a-u 998 to 1610 13 to 624   tiling clone, also hits gene DHFRP1 612/624
(98 %)
6 diff
(99.1 %id)
BE899155.
matches multiple genes
adenocarcinoma cell line, ovary P1.a-u 1119 to 1895 1 to 771   tiling clone, also hits gene DHFRP1 771/953
(80 %)
42 diff
(95.6 %id)
CB145810.
matches multiple genes
Liver P1.a-u 1183 to 1615 1 to 432     also hits gene DHFRP1 432/432
(100 %)
2 diff
(99.6 %id)
BE907826.
matches multiple genes
epithelioid carcinoma, Pancreas P1.a-u 1198 to 1594 1 to 400     also hits gene DHFRP1 400/400
(100 %)
9 diff
(97.8 %id)
BF084814.
matches multiple genes
denis_drash P1.a-u 1207 to 1351 16 to 160     also hits gene DHFRP1 145/165
(87 %)
2 diff
(98.8 %id)
BG986073.
matches multiple genes
denis_drash P1.a-u 1207 to 1351 16 to 160     also hits gene DHFRP1 145/165
(87 %)
2 diff
(98.8 %id)
H52042.
matches multiple genes
liver and spleen P1.a-u 1272 to 1597 1 to 327     also hits gene DHFRP1 327/327
(100 %)
6 diff
(98.2 %id)
BM710202.
matches multiple genes
eye, optic nerve P1.a-u 1299 to 1865 11 to 577   tiling clone, also hits gene DHFRP1 567/577
(98 %)
6 diff
(99.0 %id)
AA059177.
matches multiple genes
eye, retina P1.a-u 1600 to 2004 407 to 1     Submitted on the opposite strand, also hits gene DHFRP1 407/408
(99 %)
10 diff
(97.6 %id)
AA001097.
matches multiple genes
eye, retina P1.a-u 1636 to 1977 342 to 1   tiling clone, Submitted on the opposite strand, also hits gene DHFRP1 342/342
(100 %)
4 diff
(98.9 %id)
BE393437.
matches multiple genes
endometrium, adenocarcinoma cell line, uterus P1.a-u 1640 to 2169 1 to 543   tiling clone, also hits gene DHFRP1 543/694
(78 %)
34 diff
(95.2 %id)
H24390.
matches multiple genes
whole brain P1.a-u 1641 to 2033 416 to 11   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base), also hits gene DHFRP1 406/470
(86 %)
18 diff
(96.2 %id)
CF140645.
matches multiple genes
CNCAP(3)T-225 cell line, Prostate P1.a-u 1810 to 2237 8 to 435   tiling clone, also hits gene DHFRP1 428/435
(98 %)
6 diff
(98.7 %id)
AA135018.
matches multiple genes
colon, tumor P1.a-u 1830 to 2186 1 to 357   tiling clone, also hits gene DHFRP1 357/357
(100 %)
13 diff
(96.4 %id)
DA569018.
matches multiple genes
whole embryo, mainly head P1.a-u 1839 to 2671 29 to 856   tiling clone, capped also hits gene DHFRP1 828/855
(96 %)
6 diff
(99.3 %id)
BU168890.
matches multiple genes
melanotic melanoma, cell line, skin P1.a-u 1913 to 2836 1 to 928     also hits gene DHFRP1 928/930
(99 %)
35 diff
(96.3 %id)
CB162469.
matches multiple genes
Liver P1.a-u 1932 to 2504 6 to 577     also hits gene DHFRP1 572/577
(99 %)
6 diff
(99.0 %id)
BY995818.
matches multiple genes
  P1.a-u 1989 to 2651 1 to 665   tiling clone, also hits gene DHFRP1 665/665
(100 %)
10 diff
(98.5 %id)
BF570033.
matches multiple genes
Kidney, renal carcinoma (ascites) P1.a-u 2084 to 2743 682 to 13     also hits gene DHFRP1 670/975
(68 %)
34 diff
(96.6 %id)
CX868592.
matches multiple genes
embryonic stem P1.a-u 2119 to 2829 716 to 1     also hits gene DHFRP1 716/716
(100 %)
9 diff
(98.8 %id)
CX759233.
matches multiple genes
Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass P1.a-u 2144 to 2802 692 to 35     also hits gene DHFRP1 658/720
(91 %)
0 diff
(100 %id)
TI_154166658.
matches multiple genes
  P1.a-u 2156 to 2827 764 to 90     Submitted on the opposite strand, also hits gene DHFRP1 675/804
(83 %)
0 diff
(100 %id)
AA281033.
matches multiple genes
germinal center B cell P1.a-u 2182 to 2444 1 to 264     also hits gene DHFRP1 264/264
(100 %)
2 diff
(99.3 %id)
BF204108.
matches multiple genes
muscle, rhabdomyosarcoma P1.a-u 2186 to 2758 1 to 573     also hits gene DHFRP1 573/576
(99 %)
2 diff
(99.7 %id)
AW951651.
matches multiple genes
  P1.a-u 2187 to 2632 1 to 448     also hits gene DHFRP1 448/448
(100 %)
4 diff
(99.2 %id)
W07766.
matches multiple genes
lung P1.a-u 2195 to 2720 1 to 526     also hits gene DHFRP1 526/527
(99 %)
5 diff
(99.1 %id)
AA423961.
matches multiple genes
  P1.a-u 2204 to 2742 1 to 536     also hits gene DHFRP1 536/536
(100 %)
6 diff
(98.9 %id)
T28939.
matches multiple genes
blood, white blood cells P1.a-u 2212 to 2554 1 to 343     also hits gene DHFRP1 343/346
(99 %)
6 diff
(98.3 %id)
AA557160.
matches multiple genes
breast P1.a-u 2229 to 2806 577 to 1     also hits gene DHFRP1 577/577
(100 %)
4 diff
(99.4 %id)
CF137293.
matches multiple genes
lymph P1.a-u 2230 to 2827 615 to 18     Submitted on the opposite strand, also hits gene DHFRP1 598/615
(97 %)
0 diff
(100 %id)
DB365467.
matches multiple genes
  P1.a-u 2231 to 2807 574 to 1     also hits gene DHFRP1 574/574
(100 %)
11 diff
(98.1 %id)
AA488803.
matches multiple genes
germinal center B cell P1.a-u 2232 to 2542 1 to 311     also hits gene DHFRP1 311/311
(100 %)
0 diff
(100 %id)
AI421996.
matches multiple genes
brain, glioblastoma (pooled) P1.a-u 2236 to 2801 566 to 1     also hits gene DHFRP1 566/566
(100 %)
4 diff
(99.3 %id)
AA280993.
matches multiple genes
germinal center B cell P1.a-u 2250 to 2433 1 to 184     also hits gene DHFRP1 184/185
(99 %)
2 diff
(99.0 %id)
AU152549.
matches multiple genes
  P1.a-u 2250 to 2807 559 to 1     also hits gene DHFRP1 559/561
(99 %)
8 diff
(98.6 %id)
BU429801.
matches multiple genes
lymph P1.a-u 2266 to 2749 491 to 8     Submitted on the opposite strand, also hits gene DHFRP1 484/491
(98 %)
0 diff
(100 %id)
AU152199.
matches multiple genes
  P1.a-u 2268 to 2807 536 to 1     also hits gene DHFRP1 536/537
(99 %)
12 diff
(97.8 %id)
AU151307.
matches multiple genes
  P1.a-u 2273 to 2807 535 to 1     also hits gene DHFRP1 535/536
(99 %)
11 diff
(98.0 %id)
CB853404.
matches multiple genes
Human Lung Epithelial cells, lung P1.a-u 2278 to 2776 1 to 499     Submitted on the opposite strand, also hits gene DHFRP1 499/501
(99 %)
8 diff
(98.5 %id)
AI096798.
matches multiple genes
brain, glioblastoma (pooled) P1.a-u 2294 to 2809 516 to 1     also hits gene DHFRP1 516/516
(100 %)
2 diff
(99.7 %id)
BF244150.
matches multiple genes
brain, glioblastoma P1.a-u 2296 to 2765 1 to 469     also hits gene DHFRP1 469/470
(99 %)
4 diff
(99.2 %id)
CK820514.
matches multiple genes
insulinoma, Pancreas P1.a-u 2327 to 2550 224 to 1     also hits gene DHFRP1 224/224
(100 %)
0 diff
(100 %id)
BG170196.
matches multiple genes
hypernephroma, cell line, Kidney P1.a-u 2329 to 2807 1 to 477   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene DHFRP1 477/477
(100 %)
3 diff
(99.4 %id)
AA424790.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus P1.a-u 2336 to 2808 473 to 1     also hits gene DHFRP1 473/473
(100 %)
3 diff
(99.4 %id)
CN312003.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline P1.a-u 2343 to 2796 1 to 454     also hits gene DHFRP1 454/454
(100 %)
2 diff
(99.6 %id)
BI334341.
matches multiple genes
cervical carcinoma cell line, cervix P1.a-u 2347 to 3076 1 to 729     also hits gene DHFRP1 729/730
(99 %)
9 diff
(98.8 %id)
DB552022.
matches multiple genes
hippocampus P1.a-u 2354 to 2807 1 to 454     Submitted on the opposite strand, also hits gene DHFRP1 454/454
(100 %)
4 diff
(99.2 %id)
DB331546.
matches multiple genes
small intestine P1.a-u 2357 to 2807 451 to 1     also hits gene DHFRP1 451/456
(98 %)
5 diff
(99.0 %id)
DB526334.
matches multiple genes
testis P1.a-u 2361 to 2806 1 to 446     Submitted on the opposite strand, also hits gene DHFRP1 446/447
(99 %)
3 diff
(99.4 %id)
AA707045.
matches multiple genes
liver and spleen P1.a-u 2362 to 2806 445 to 1     also hits gene DHFRP1 445/445
(100 %)
2 diff
(99.6 %id)
AI131169.
matches multiple genes
heart P1.a-u 2362 to 2808 447 to 1     also hits gene DHFRP1 447/448
(99 %)
2 diff
(99.6 %id)
AI880434.
matches multiple genes
colon P1.a-u 2362 to 2807 446 to 1     also hits gene DHFRP1 446/446
(100 %)
2 diff
(99.6 %id)
AL525513.
matches multiple genes
brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized P1.a-u 2363 to 3396 1042 to 22     also hits gene DHFRP1 1021/1051
(97 %)
0 diff
(100 %id)
AI003995.
matches multiple genes
  P1.a-u 2366 to 2810 445 to 1     also hits gene DHFRP1 445/445
(100 %)
2 diff
(99.6 %id)
AA134941.
matches multiple genes
colon, tumor P1.a-u 2374 to 2810 440 to 1     also hits gene DHFRP1 440/440
(100 %)
6 diff
(98.7 %id)
N73567.
matches multiple genes
liver and spleen P1.a-u 2375 to 2802 437 to 1     also hits gene DHFRP1 437/447
(97 %)
13 diff
(97.1 %id)
DB529806.
matches multiple genes
hippocampus P1.a-u 2376 to 2807 1 to 434     Submitted on the opposite strand, also hits gene DHFRP1 434/434
(100 %)
16 diff
(96.4 %id)
DB514204.
matches multiple genes
testis P1.a-u 2379 to 2807 1 to 428     Submitted on the opposite strand, also hits gene DHFRP1 428/428
(100 %)
4 diff
(99.1 %id)
AI141920.
matches multiple genes
heart P1.a-u 2384 to 2808 425 to 1     also hits gene DHFRP1 425/425
(100 %)
2 diff
(99.6 %id)
H79646.
matches multiple genes
liver and spleen P1.a-u 2386 to 2776 408 to 1     also hits gene DHFRP1 408/411
(99 %)
21 diff
(94.9 %id)
AA463389.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus P1.a-u 2397 to 2640 1 to 245     also hits gene DHFRP1 245/245
(100 %)
1 diff
(99.6 %id)
AI436158.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus P1.a-u 2403 to 2807 405 to 1     also hits gene DHFRP1 405/405
(100 %)
4 diff
(99.1 %id)
AA292482.
matches multiple genes
germinal center B cell P1.a-u 2410 to 2807 398 to 1     also hits gene DHFRP1 398/398
(100 %)
2 diff
(99.5 %id)
AI359154.
matches multiple genes
brain, glioblastoma (pooled) P1.a-u 2418 to 2818 401 to 1     also hits gene DHFRP1 401/401
(100 %)
2 diff
(99.6 %id)
BM475716.
matches multiple genes
embryonal carcinoma, cell line, testis P1.a-u 2419 to 3399 1 to 1004     also hits gene DHFRP1 1004/1045
(96 %)
48 diff
(95.5 %id)
AI039319.
matches multiple genes
  P1.a-u 2420 to 2813 392 to 1     also hits gene DHFRP1 392/392
(100 %)
6 diff
(98.5 %id)
AI695673.
matches multiple genes
Kidney P1.a-u 2434 to 2807 375 to 1     also hits gene DHFRP1 375/375
(100 %)
5 diff
(98.7 %id)
AA665122.
matches multiple genes
alveolar rhabdomyosarcoma P1.a-u 2454 to 2818 365 to 1     also hits gene DHFRP1 365/366
(99 %)
5 diff
(98.7 %id)
BY797984.
matches multiple genes
eye P1.a-u 2458 to 2808 1 to 351     also hits gene DHFRP1 351/351
(100 %)
2 diff
(99.5 %id)
AI361777.
matches multiple genes
B-cell, chronic lymphotic leukemia P1.a-u 2483 to 2985 1 to 500     Submitted on the opposite strand, also hits gene DHFRP1 500/500
(100 %)
2 diff
(99.6 %id)
AW051136.
matches multiple genes
brain, glioblastoma (pooled) P1.a-u 2483 to 2801 320 to 1     also hits gene DHFRP1 320/320
(100 %)
3 diff
(99.1 %id)
DB511482.
matches multiple genes
testis P1.a-u 2508 to 2805 9 to 305     Submitted on the opposite strand, also hits gene DHFRP1 297/307
(96 %)
20 diff
(93.5 %id)
N90189.
matches multiple genes
liver and spleen P1.a-u 2542 to 2811 273 to 1   tiling clone, also hits gene DHFRP1 273/322
(84 %)
5 diff
(98.5 %id)
W35248.
matches multiple genes
heart P1.a-u 2553 to 2802 1 to 250     also hits gene DHFRP1 250/250
(100 %)
2 diff
(99.2 %id)
AI269216.
matches multiple genes
Kidney P1.a-u 2598 to 2807 210 to 1     also hits gene DHFRP1 210/210
(100 %)
4 diff
(98.1 %id)
TI_149279254.
matches multiple genes
  P1.a-u 2721 to 3298 53 to 627   tiling clone, Submitted on the opposite strand, also hits gene DHFRP1 575/766
(75 %)
7 diff
(99.1 %id)
AW059615.
matches multiple genes
  P1.a-u 2728 to 2807 1 to 80     also hits gene DHFRP1 80/80
(100 %)
0 diff
(100 %id)
BE765903.
matches multiple genes
nervous_tumor P1.a-u 2806 to 2972 164 to 1   tiling clone, also hits gene DHFRP1 164/167
(98 %)
2 diff
(98.9 %id)
AA648876.
matches multiple genes
germinal center B cell P1.a-u 2817 to 3225 406 to 1     also hits gene DHFRP1 406/470
(86 %)
42 diff
(91.1 %id)
BF735352.
matches multiple genes
amnion_normal P1.a-u 2818 to 3190 430 to 56     Submitted on the opposite strand, also hits gene DHFRP1 375/432
(86 %)
0 diff
(100 %id)
BE827830.
matches multiple genes
lung_tumor P1.a-u 2826 to 2980 169 to 14     also hits gene DHFRP1 156/169
(92 %)
0 diff
(100 %id)
CN312009.
matches multiple genes
embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells P1.a-u 2832 to 3444 613 to 1     Submitted on the opposite strand, also hits gene DHFRP1 613/613
(100 %)
2 diff
(99.7 %id)
BE071304.
matches multiple genes
breast P1.a-u 2862 to 3265 407 to 1     Submitted on the opposite strand, also hits gene DHFRP1 407/415
(98 %)
14 diff
(96.7 %id)
W23580.
matches multiple genes
heart P1.a-u 2885 to 3244 368 to 1     also hits gene DHFRP1 368/373
(98 %)
6 diff
(98.4 %id)
AA651836.
matches multiple genes
germinal center B cell P1.a-u 2892 to 3194 303 to 1     also hits gene DHFRP1 303/303
(100 %)
3 diff
(99.1 %id)
BE673552.
matches multiple genes
Prostate P1.a-u 2901 to 3236 336 to 1     also hits gene DHFRP1 336/336
(100 %)
2 diff
(99.5 %id)
DB355602.
matches multiple genes
whole embryo, mainly head P1.a-u 2903 to 3454 562 to 1     also hits gene DHFRP1 562/571
(98 %)
21 diff
(96.4 %id)
DB356846.
matches multiple genes
whole embryo, mainly head P1.a-u 2903 to 3454 551 to 1     also hits gene DHFRP1 551/555
(99 %)
4 diff
(99.3 %id)
AV681698.
matches multiple genes
hepatocellular carcinoma P1.a-u 2908 to 3283 1 to 378   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene DHFRP1 378/378
(100 %)
6 diff
(98.5 %id)
AI830697.
matches multiple genes
lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) P1.a-u 2908 to 3453 546 to 1     also hits gene DHFRP1 546/546
(100 %)
2 diff
(99.7 %id)
BQ304259.
matches multiple genes
breast P1.a-u 2911 to 3282 22 to 395     also hits gene DHFRP1 374/395
(94 %)
6 diff
(98.5 %id)
DB358651.
matches multiple genes
whole embryo, mainly head P1.a-u 2941 to 3454 521 to 1     also hits gene DHFRP1 521/548
(95 %)
20 diff
(96.4 %id)
AA280816.
matches multiple genes
germinal center B cell P1.a-u 2969 to 3465 498 to 1     also hits gene DHFRP1 498/498
(100 %)
2 diff
(99.6 %id)
AA280833.
matches multiple genes
germinal center B cell P1.a-u 2995 to 3465 472 to 1     also hits gene DHFRP1 472/472
(100 %)
2 diff
(99.6 %id)
AA463881.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus P1.a-u 3004 to 3455 452 to 1     also hits gene DHFRP1, POT1 452/452
(100 %)
2 diff
(99.6 %id)
AA489055.
matches multiple genes
germinal center B cell P1.a-u 3022 to 3472 452 to 1     also hits gene DHFRP1 452/452
(100 %)
3 diff
(99.4 %id)
AI186480.
matches multiple genes
placenta P1.a-u 3033 to 3456 424 to 1     also hits gene DHFRP1 424/424
(100 %)
3 diff
(99.3 %id)
AI635482.
matches multiple genes
Kidney, renal cell tumor P1.a-u 3033 to 3456 424 to 1   tiling clone, also hits gene DHFRP1 424/424
(100 %)
2 diff
(99.6 %id)
AA447680.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus P1.a-u 3121 to 3454 334 to 1     also hits gene DHFRP1 334/334
(100 %)
0 diff
(100 %id)
AI184392.
matches multiple genes
placenta P1.a-u 3143 to 3456 314 to 1     also hits gene DHFRP1 314/314
(100 %)
1 diff
(99.7 %id)
H94631.
matches multiple genes
placenta P1.a-u 3166 to 3435 271 to 1     also hits gene DHFRP1 271/271
(100 %)
1 diff
(99.7 %id)
BQ437128.
matches multiple genes
leiomyosarcoma, uterus P1.a-u 3259 to 3454 12 to 209   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene DHFRP1 198/209
(94 %)
6 diff
(97.2 %id)
AJ711655.
matches multiple genes
heart P1.a-u 3331 to 3454 1 to 124   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base), also hits gene DHFRP1 124/124
(100 %)
0 diff
(100 %id)
EC455651.
matches multiple genes
Prostate P1.a-u 3384 to 3452 1 to 70     also hits gene DHFRP1 70/70
(100 %)
1 diff
(98.6 %id)
AU104222.
matches multiple genes
  P1.c-u 1 to 50 1 to 50 K5N R8L tiling clone, also hits gene DHFRP1 50/50
(100 %)
2 diff
(96.0 %id)
TI_151749091   Gene DHFR, variant not shown       AAA This clone was ignored    
AV711675.
matches multiple genes
  Gene DHFRP1, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene DHFRP1    
AV711675.
matches multiple genes
  Gene DHFR, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene DHFRP1    
AV738672 cord Blood Gene DHFR, variant not shown       AAA Suspected internal deletion, this clone was ignored    
DB372593 placenta Gene DHFR, variant not shown         Suspected internal deletion, this clone was ignored    
DA828148 placenta Gene DHFR, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB371057.
matches multiple genes
ovary, tumor tissue Gene DHFRP1, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene DHFRP1    
DB371057.
matches multiple genes
ovary, tumor tissue Gene DHFR, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene DHFRP1    
AU133546.
matches multiple genes
ovary, tumor tissue Gene DHFRP1, variant not shown       capped Suspected internal deletion, this clone was ignored, also hits gene DHFRP1    
AU133546.
matches multiple genes
ovary, tumor tissue Gene DHFR, variant not shown       capped Suspected internal deletion, this clone was ignored, also hits gene DHFRP1    
AI418127.
matches multiple genes
brain, glioblastoma (pooled) Gene DHFRP1, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene DHFRP1    
AI418127.
matches multiple genes
brain, glioblastoma (pooled) Gene DHFR, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene DHFRP1    
AI144299 brain, glioblastoma (pooled) Gene DHFR, variant not shown         This clone was ignored    
AI340280 lung Gene DHFR, variant not shown         This clone was ignored    
BG393668 embryonal carcinoma, cell line, testis Gene DHFR, variant not shown         Suspected internal deletion, this clone was ignored    
BQ015066 Chondrosarcoma, Left Pubic Bone Gene DHFR, variant not shown         Suspected internal deletion, this clone was ignored    
BU947555 insulinoma, Pancreas Gene DHFR, variant not shown         Suspected internal deletion, this clone was ignored    
BU947822 insulinoma, Pancreas Gene DHFR, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h, .i-u, .j Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI