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Gene DGKZTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
431 supporting clones for gene DGKZ back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001105540.1   .a 1 to 4091 1 to 4091 exact RefSeq,   4091/4094
(99 %)
5 diff
(99.9 %id)
U94905   .a 1 to 4086 1 to 4086 Q62R L200V L207C L208C tiling clone,   4086/4094
(99 %)
7 diff
(99.9 %id)
BM151943 leukopheresis .a 379 to 831 1 to 453   tiling clone,   453/456
(99 %)
9 diff
(98.1 %id)
CN286744 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 1 to 262 1 to 262   tiling clone,   262/262
(100 %)
3 diff
(98.9 %id)
AK124594 cerebellum .b 225 to 4037 1 to 3813 exact tiling clone, available from FLJ,   3813/3813
(100 %)
0 diff
(100 %id)
DA099852 cerebellum .b 226 to 790 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA127760 cerebellum .b 244 to 845 2 to 604   capped   603/603
(100 %)
2 diff
(99.7 %id)
DB239291 trachea .b 247 to 613 2 to 368   capped   367/367
(100 %)
0 diff
(100 %id)
AK126970 brain .b 509 to 4039 1 to 3531 A502V L683H tiling clone, available from FLJ,   3531/3531
(100 %)
2 diff
(100.0 %id)
NM_201532.1   .b 509 to 4040 1 to 3532 exact RefSeq, AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 3532/3532
(100 %)
0 diff
(100 %id)
DA224194 brain .b 510 to 1137 2 to 630   capped   629/629
(100 %)
1 diff
(99.9 %id)
C18930 placenta .b 698 to 956 1 to 259       259/259
(100 %)
3 diff
(98.9 %id)
CN311929 embryonic stem cells, cell lines H1, H7, andH9 .b 840 to 1445 1 to 606       606/606
(100 %)
2 diff
(99.7 %id)
CR992541 T-Lymphocytes .b 941 to 1654 1 to 718       718/750
(95 %)
6 diff
(99.2 %id)
CN311924 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 957 to 1448 1 to 490       490/490
(100 %)
2 diff
(99.6 %id)
DB133648 thymus .b 995 to 1539 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DA262699 caudate nucleus .b 1016 to 1514 2 to 500   capped   499/499
(100 %)
0 diff
(100 %id)
BM737892 Ascites, stomach .b 1033 to 1448 1 to 417       417/417
(100 %)
7 diff
(98.4 %id)
DB149118 thymus .b 1044 to 1569 2 to 528   capped   527/527
(100 %)
1 diff
(99.9 %id)
BQ427900 melanotic melanoma, skin .b 1048 to 1829 24 to 807       784/836
(93 %)
10 diff
(98.9 %id)
BM738217 Ascites, stomach .b 1048 to 1501 1 to 454       454/454
(100 %)
2 diff
(99.6 %id)
BM738200 Ascites, stomach .b 1052 to 1563 1 to 512       512/512
(100 %)
0 diff
(100 %id)
DA296667 hippocampus .b 1118 to 1689 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA769481 brain .b 1136 to 1701 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
TI_154196288   .b 1137 to 1654 73 to 588       516/1055
(48 %)
20 diff
(98.2 %id)
DA994186 synovial membrane tissue from rheumatioidarthritis .b 1150 to 1687 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA147812 amygdala .b 1152 to 1726 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
BE734841 choriocarcinoma, placenta .b 1156 to 1685 1 to 539       537/539
(99 %)
29 diff
(94.7 %id)
CV805365 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 1190 to 1916 1 to 726       726/726
(100 %)
4 diff
(99.5 %id)
DA147471 amygdala .b 1228 to 1713 2 to 487   capped   486/486
(100 %)
1 diff
(99.8 %id)
DA910944   .b 1229 to 1788 2 to 561   capped   560/561
(99 %)
3 diff
(99.5 %id)
DB134830 thymus .b 1254 to 1806 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
BX952233   .b 1256 to 1824 1 to 569       569/569
(100 %)
0 diff
(100 %id)
DB122975 thymus .b 1273 to 1759 2 to 488   capped   487/487
(100 %)
1 diff
(99.8 %id)
BM742137 stomach .b 1291 to 1894 1 to 604       604/604
(100 %)
0 diff
(100 %id)
BG480767 choriocarcinoma, placenta .b 1328 to 1826 1 to 505       505/714
(70 %)
23 diff
(96.8 %id)
BM047464 carcinoma, cell line, Prostate .b 1336 to 2089 1 to 756       756/756
(100 %)
13 diff
(98.3 %id)
DB147403 thymus .b 1337 to 1872 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
BU148562 carcinoma, cell line, Prostate .b 1340 to 2243 1 to 904       904/906
(99 %)
12 diff
(98.7 %id)
DB260171 uterus .b 1410 to 1972 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BP220264.
matches multiple genes
colon .b 1413 to 1983 1 to 571     also hits gene LOC400126 571/571
(100 %)
10 diff
(98.3 %id)
BG012904.
matches multiple genes
placenta_normal .b 1450 to 1686 239 to 1     also hits gene LOC400126 239/239
(100 %)
6 diff
(97.5 %id)
BG013431 placenta_normal .b 1460 to 1769 308 to 1       308/308
(100 %)
0 diff
(100 %id)
DA155570 amygdala .b 1464 to 2019 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA182358 amygdala .b 1500 to 2061 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
AA310594   .b 1504 to 1820 1 to 318       318/318
(100 %)
3 diff
(99.1 %id)
AU132833.
matches multiple genes
  .b 1517 to 2332 2 to 819   capped also hits gene LOC400126 818/819
(99 %)
16 diff
(98.1 %id)
DA980247.
matches multiple genes
synovial membrane tissue from rheumatioidarthritis .b 1555 to 2114 2 to 562   capped also hits gene LOC400126 561/561
(100 %)
2 diff
(99.7 %id)
CD617329.
matches multiple genes
  .b 1579 to 2298 1 to 717     also hits gene LOC400126 717/717
(100 %)
13 diff
(98.2 %id)
DB250353.
matches multiple genes
uterus .b 1588 to 2128 2 to 542   capped also hits gene LOC400126 541/541
(100 %)
0 diff
(100 %id)
AU131298.
matches multiple genes
  .b 1599 to 2412 2 to 818   capped also hits gene LOC400126 815/819
(99 %)
14 diff
(98.3 %id)
BM832578.
matches multiple genes
stomach .b 1606 to 2004 1 to 399     also hits gene LOC400126 399/399
(100 %)
5 diff
(98.8 %id)
BP222585.
matches multiple genes
  .b 1607 to 2187 1 to 581     also hits gene LOC400126 581/581
(100 %)
1 diff
(99.9 %id)
BI911771 leukocyte .b 1620 to 2432 1 to 813       813/814
(99 %)
11 diff
(98.7 %id)
TI_57233880   .b 1620 to 2432 1 to 813       813/814
(99 %)
11 diff
(98.7 %id)
DA168614.
matches multiple genes
amygdala .b 1662 to 2143 2 to 484   capped also hits gene LOC400126 483/483
(100 %)
1 diff
(99.8 %id)
DA768796.
matches multiple genes
brain .b 1663 to 2188 2 to 527   capped also hits gene LOC400126 526/526
(100 %)
0 diff
(100 %id)
DA966034.
matches multiple genes
stomach .b 1664 to 2218 2 to 556   capped also hits gene LOC400126 555/555
(100 %)
1 diff
(99.9 %id)
CB152739.
matches multiple genes
brain .b 1673 to 2234 1 to 562     also hits gene LOC400126 562/562
(100 %)
0 diff
(100 %id)
DA454925 tongue, tumor tissue .b 1677 to 2271 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
BE885710.
matches multiple genes
leiomyosarcoma, uterus .b 1694 to 2349 1 to 653   tiling clone, also hits gene LOC400126 653/935
(69 %)
10 diff
(99.0 %id)
BP199619 brain .b 1773 to 2843 1 to 584       575/584
(98 %)
10 diff
(98.3 %id)
DA270007 caudate nucleus .b 1799 to 2359 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA209001 brain .b 1808 to 2364 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
CN311928.
matches multiple genes
embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1828 to 2166 1 to 339     also hits gene LOC400126 339/339
(100 %)
5 diff
(98.6 %id)
DA202387 brain .b 1836 to 2402 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BQ420734 embryonal carcinoma, cell line, testis .b 1892 to 2758 1 to 868       868/869
(99 %)
7 diff
(99.2 %id)
BI011123 lung_normal .b 1974 to 2496 544 to 16       529/544
(97 %)
4 diff
(99.3 %id)
BJ990924 hepatoblastoma .b 1975 to 2553 1 to 579       579/580
(99 %)
0 diff
(100 %id)
AW882096 ovary .b 1985 to 2442 472 to 13       460/472
(97 %)
4 diff
(99.2 %id)
BP206134 coronary artery .b 1985 to 2566 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BP341481 stomach mucosa .b 1985 to 2565 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
R87899.
matches multiple genes
brain .b 1989 to 2344 1 to 361     also hits gene LOC400126 361/375
(96 %)
9 diff
(97.6 %id)
BP203329 coronary artery .b 1994 to 2513 1 to 520       520/521
(99 %)
1 diff
(99.9 %id)
AW365053.
matches multiple genes
denis_drash .b 1999 to 2286 288 to 1     also hits gene LOC400126 288/288
(100 %)
3 diff
(99.0 %id)
DA178093 amygdala .b 2039 to 2628 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
BI193775 epithelioid carcinoma cell line, Pancreas .b 2041 to 2887 1 to 853       853/857
(99 %)
27 diff
(96.9 %id)
BF568625 epithelioid carcinoma cell line, Pancreas .b 2042 to 2775 1 to 729       729/730
(99 %)
6 diff
(99.2 %id)
BI160861 epithelioid carcinoma cell line, Pancreas .b 2042 to 2932 1 to 894       894/898
(99 %)
17 diff
(98.2 %id)
BX456311 thymus .b 2068 to 2944 1 to 886       886/886
(100 %)
36 diff
(96.0 %id)
DA930351 small intestine .b 2077 to 2616 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA088459 cerebellum .b 2088 to 2659 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BQ879871 dorsal root ganglia .b 2095 to 2987 1 to 896       896/922
(97 %)
15 diff
(98.4 %id)
H51144 brain .b 2099 to 2416 1 to 320       320/320
(100 %)
5 diff
(98.5 %id)
BX370613   .b 2106 to 2957 45 to 891       847/891
(95 %)
14 diff
(98.5 %id)
BI254616 cervical carcinoma cell line, cervix .b 2110 to 2930 1 to 831       831/838
(99 %)
21 diff
(97.5 %id)
DA352039 substantia nigra .b 2111 to 2654 2 to 547   capped   546/546
(100 %)
2 diff
(99.7 %id)
BP323936 Pancreas .b 2111 to 2693 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
CN311926 embryonic stem cells, cell lines H1, H7, andH9 .b 2136 to 2299 1 to 164       164/164
(100 %)
0 diff
(100 %id)
BG425451 Kidney, renal cell adenocarcinoma .b 2157 to 2888 1 to 725       725/923
(78 %)
16 diff
(98.3 %id)
BG981454.
matches multiple genes
colon_normal .b 2164 to 2456 1 to 293   tiling clone, also hits gene LOC400126 293/293
(100 %)
13 diff
(95.6 %id)
DA308674 hippocampus .b 2201 to 2769 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BF766369 colon_est .b 2225 to 2438 219 to 1     Submitted on the opposite strand 219/219
(100 %)
8 diff
(96.4 %id)
BF762323 colon_est .b 2283 to 2588 98 to 401       304/401
(75 %)
7 diff
(98.3 %id)
BC008018 Lung, small cell carcinoma .b 2305 to 4037 1 to 1733   available from MGC, AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 1733/1733
(100 %)
0 diff
(100 %id)
M79109   .b 2307 to 2565 1 to 260       260/260
(100 %)
3 diff
(98.9 %id)
BM150493 leukopheresis .b 2327 to 2837 1 to 510       510/510
(100 %)
8 diff
(98.5 %id)
BM151149 leukopheresis .b 2327 to 2757 1 to 432       432/432
(100 %)
1 diff
(99.8 %id)
AL134638 brain .b 2424 to 2978 1 to 552       552/553
(99 %)
5 diff
(99.1 %id)
BI850538 duodenal adenocarcinoma, cell line, small intestine .b 2431 to 3097 1 to 669       667/669
(99 %)
5 diff
(99.3 %id)
CX868648 embryonic stem .b 2441 to 2961 1 to 521     Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 521/521
(100 %)
3 diff
(99.5 %id)
CD617333   .b 2476 to 2918 1 to 451       451/451
(100 %)
14 diff
(96.9 %id)
CB045838 colon, juvenile granulosa tumor .b 2509 to 3015 11 to 517       507/517
(98 %)
6 diff
(98.9 %id)
CR986701 T-Lymphocytes .b 2512 to 3203 1 to 693       693/694
(99 %)
4 diff
(99.5 %id)
CD617332   .b 2537 to 2924 402 to 15       388/402
(96 %)
1 diff
(99.8 %id)
BU597484 mixed (pool of 40 RNAs) .b 2548 to 2984 1 to 442       442/1083
(40 %)
10 diff
(99.1 %id)
BM796623 Ascites, stomach .b 2578 to 3166 1 to 589       589/589
(100 %)
0 diff
(100 %id)
AW504084 lymph .b 2618 to 3138 1 to 520       520/520
(100 %)
6 diff
(98.9 %id)
BM799032 Ascites, stomach .b 2623 to 3092 1 to 470       470/470
(100 %)
3 diff
(99.4 %id)
EH327119   .b 2624 to 2689 1 to 66       66/66
(100 %)
0 diff
(100 %id)
BM854496 Ascites, stomach .b 2625 to 3151 1 to 527       527/527
(100 %)
3 diff
(99.5 %id)
TI_154160181   .b 2625 to 3175 81 to 630       550/550
(100 %)
3 diff
(99.5 %id)
BM917392 blood, natural killer cells, cell line .b 2631 to 3182 1 to 553       553/1251
(44 %)
9 diff
(99.3 %id)
CD579371 brain .b 2667 to 3423 1 to 747       747/976
(76 %)
26 diff
(97.4 %id)
R86863.
matches multiple genes
brain .b 2684 to 3010 1 to 328     also hits gene LOC400126 328/328
(100 %)
4 diff
(98.8 %id)
BX115617 brain .b 2685 to 3486 1 to 804       804/806
(99 %)
5 diff
(99.4 %id)
BF092023.
matches multiple genes
testis_normal .b 2686 to 2961 1 to 275     also hits gene LOC400126 275/339
(81 %)
4 diff
(98.9 %id)
AL529228 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .b 2688 to 3245 1 to 561   fully sequenced,   559/559
(100 %)
16 diff
(97.2 %id)
BG171611 hypernephroma, cell line, Kidney .b 2694 to 3021 18 to 346       329/997
(32 %)
10 diff
(99.0 %id)
AA326664 brain, cerebellum .b 2722 to 2995 1 to 274       274/274
(100 %)
0 diff
(100 %id)
AW961232   .b 2723 to 3320 1 to 597       597/609
(98 %)
7 diff
(98.9 %id)
BQ962617 leiomyosarcoma, uterus .b 2756 to 3568 1 to 822       822/901
(91 %)
16 diff
(98.3 %id)
BM019243 astrocytoma grade IV, cell line, brain .b 2814 to 3532 1 to 718       718/718
(100 %)
5 diff
(99.4 %id)
TI_59389923   .b 2815 to 3532 97 to 813       717/717
(100 %)
4 diff
(99.5 %id)
BU956842 adenocarcinoma, cell line, breast .b 2817 to 3583 1 to 785       785/935
(83 %)
22 diff
(97.7 %id)
BG480880 choriocarcinoma, placenta .b 2841 to 3750 1 to 914       914/916
(99 %)
58 diff
(93.7 %id)
CN413998.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .b 2850 to 2985 1 to 136     also hits gene LOC400126 136/136
(100 %)
0 diff
(100 %id)
CD617330   .b 2951 to 3253 9 to 312       304/312
(97 %)
9 diff
(97.2 %id)
CD617331   .b 2951 to 3246 296 to 1       296/305
(97 %)
4 diff
(98.7 %id)
BI092718 cervix .b 2992 to 3781 1 to 785       785/785
(100 %)
15 diff
(98.1 %id)
CN311931 embryonic stem cells, cell lines H1, H7, andH9 .b 2994 to 3665 1 to 674       674/674
(100 %)
5 diff
(99.3 %id)
BF845281 head_neck .b 3016 to 3213 199 to 1     Submitted on the opposite strand 199/226
(88 %)
4 diff
(98.3 %id)
BG010019 placenta_normal .b 3016 to 3299 1 to 285       285/285
(100 %)
5 diff
(98.3 %id)
M78857   .b 3021 to 3244 1 to 224       224/224
(100 %)
0 diff
(100 %id)
BM722648 eye, fetal eye .b 3048 to 3475 1 to 428   fully sequenced, Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 428/428
(100 %)
0 diff
(100 %id)
BG008633 placenta_normal .b 3062 to 3373 349 to 41       309/349
(88 %)
3 diff
(99.2 %id)
BU844966 ovary, teratocarcinoma, cell line .b 3064 to 3881 1 to 825       825/913
(90 %)
24 diff
(97.4 %id)
BU931802 ovary, teratocarcinoma, cell line .b 3064 to 3766 1 to 708       708/960
(73 %)
11 diff
(98.9 %id)
CN311925 embryonic stem cells, DMSO-treated H9 cellline .b 3078 to 3627 1 to 552       552/553
(99 %)
4 diff
(99.3 %id)
BE798541 lung, small cell carcinoma .b 3095 to 3825 18 to 741       724/826
(87 %)
17 diff
(98.0 %id)
BM911517 amelanotic melanoma, cell line, skin .b 3101 to 3593 21 to 525       505/1144
(44 %)
30 diff
(97.4 %id)
CR981510 T-Lymphocytes .b 3103 to 3594 1 to 492       492/494
(99 %)
3 diff
(99.4 %id)
BM010631 amelanotic melanoma, cell line, skin .b 3106 to 3822 1 to 717       717/720
(99 %)
15 diff
(98.0 %id)
TI_59385468   .b 3107 to 3822 64 to 779       716/719
(99 %)
14 diff
(98.1 %id)
BQ339563 nervous_normal .b 3141 to 3590 457 to 9       449/457
(98 %)
14 diff
(97.0 %id)
AL529034 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .b 3178 to 4037 1 to 860   fully sequenced,   860/860
(100 %)
1 diff
(99.9 %id)
AL529227 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .b 3186 to 3917 818 to 77   fully sequenced,   742/742
(100 %)
20 diff
(97.4 %id)
CN311927 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 3193 to 3761 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
BY798604 eye .b 3211 to 3728 1 to 518       518/518
(100 %)
0 diff
(100 %id)
TI_149294645   .b 3217 to 4038 856 to 36   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 821/991
(82 %)
6 diff
(99.4 %id)
TI_154126772   .b 3219 to 4036 918 to 114   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 805/892
(90 %)
17 diff
(98.1 %id)
BM708849 eye, RPE and Choroid .b 3243 to 3687 1 to 445   fully sequenced, Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 445/445
(100 %)
0 diff
(100 %id)
BI039007 nervous_tumor .b 3245 to 3692 1 to 449       449/455
(98 %)
12 diff
(97.4 %id)
BX370257   .b 3250 to 4036 1 to 799       799/799
(100 %)
21 diff
(97.4 %id)
AL529033 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .b 3251 to 3891 733 to 93   fully sequenced,   641/733
(87 %)
1 diff
(99.9 %id)
BM679137 eye, fetal eye .b 3445 to 4036 610 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 592/592
(100 %)
0 diff
(100 %id)
BJ990925 hepatoblastoma .b 3477 to 4016 540 to 1       540/540
(100 %)
0 diff
(100 %id)
AU154285.
matches multiple genes
  .b 3481 to 4037 548 to 1     also hits gene LOC400126 548/557
(98 %)
18 diff
(96.8 %id)
AU153059.
matches multiple genes
  .b 3502 to 4037 540 to 1     also hits gene LOC400126 540/541
(99 %)
15 diff
(97.3 %id)
BU731525 eye, RPE and Choroid .b 3657 to 4037 396 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 378/378
(100 %)
0 diff
(100 %id)
DB299024 cerebellum .b 3675 to 4037 362 to 1       362/362
(100 %)
3 diff
(99.2 %id)
DB305123 brain .b 3703 to 4039 338 to 1       338/338
(100 %)
1 diff
(99.8 %id)
R86828.
matches multiple genes
brain .b 3734 to 4015 279 to 1     also hits gene LOC400126 279/279
(100 %)
5 diff
(98.3 %id)
H51107 brain .b 3843 to 4018 175 to 1       175/175
(100 %)
2 diff
(98.9 %id)
CX868572 embryonic stem .b 3902 to 4038 168 to 32   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 137/142
(96 %)
8 diff
(94.4 %id)
DC416889 trachea .c 1 to 583 1 to 583   tiling clone,   583/583
(100 %)
1 diff
(99.9 %id)
DC410155 thymus .c 11 to 590 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DC428083   .c 124 to 710 1 to 587       587/587
(100 %)
0 diff
(100 %id)
DC373506 tongue .c 146 to 711 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC381690 placenta .c 146 to 736 1 to 593       593/593
(100 %)
2 diff
(99.7 %id)
DC307488 cerebellum .c 165 to 757 1 to 593       593/593
(100 %)
0 diff
(100 %id)
DC381912 placenta .c 165 to 713 1 to 549       549/549
(100 %)
0 diff
(100 %id)
DC308020 cerebellum .c 166 to 753 1 to 588       588/588
(100 %)
0 diff
(100 %id)
DC335689 hippocampus .c 166 to 742 1 to 577       577/577
(100 %)
0 diff
(100 %id)
DC347708 tongue, tumor tissue .c 166 to 729 1 to 564       564/572
(98 %)
2 diff
(99.7 %id)
DA193158 amygdala .c 169 to 769 2 to 606   capped   605/605
(100 %)
6 diff
(99.1 %id)
DA854232 placenta .c 169 to 751 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA857684 placenta .c 169 to 710 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DA858866 placenta .c 169 to 744 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA861820 placenta .c 169 to 734 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA989387 synovial membrane tissue from rheumatioidarthritis .c 169 to 718 2 to 555   capped   554/554
(100 %)
4 diff
(99.3 %id)
DB144859 thymus .c 169 to 711 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DB245690 uterus, tumor tissue .c 169 to 726 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
NM_201533.2   .c 171 to 3560 1 to 3390   RefSeq,   3390/3393
(99 %)
5 diff
(99.9 %id)
BE903553 choriocarcinoma, placenta .c 178 to 863 8 to 695       684/695
(98 %)
13 diff
(98.2 %id)
BE019549 choriocarcinoma, placenta .c 194 to 671 1 to 478       478/478
(100 %)
2 diff
(99.6 %id)
BE902342 choriocarcinoma, placenta .c 197 to 952 1 to 754       755/1036
(72 %)
32 diff
(97.0 %id)
BE278475 choriocarcinoma, placenta .c 201 to 659 1 to 464       464/757
(61 %)
12 diff
(98.5 %id)
BE900933 choriocarcinoma, placenta .c 201 to 734 1 to 538       538/785
(68 %)
17 diff
(97.9 %id)
DB062094 testis .c 239 to 775 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
DA864110 placenta .c 256 to 845 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA864890 placenta .c 256 to 809 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB149200 thymus .c 383 to 943 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA940099 Spleen .c 405 to 999 2 to 596   tiling clone, capped   595/595
(100 %)
0 diff
(100 %id)
CN311921 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 413 to 1053 1 to 640       640/640
(100 %)
3 diff
(99.6 %id)
DA511038 brain .c 417 to 995 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA724585   .c 441 to 1006 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
CR996774 T-Lymphocytes .c 455 to 704 1 to 250       250/251
(99 %)
2 diff
(99.3 %id)
DA946977 Spleen .c 459 to 1012 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
BM772925 Ascites, stomach .c 470 to 1165 1 to 696   tiling clone,   696/696
(100 %)
1 diff
(99.9 %id)
BM738152 Ascites, stomach .c 470 to 1122 1 to 652   tiling clone,   652/652
(100 %)
1 diff
(99.9 %id)
BM757364 Ascites, stomach .c 470 to 691 1 to 222       222/222
(100 %)
0 diff
(100 %id)
BM738489.
matches multiple genes
Ascites, stomach .c 471 to 622 1 to 153   tiling clone, also hits gene LOC400126 153/153
(100 %)
3 diff
(98.1 %id)
CR988254 T-Lymphocytes .c 479 to 1181 1 to 705   tiling clone,   703/705
(99 %)
8 diff
(98.9 %id)
BM737925 Ascites, stomach .c 486 to 1014 1 to 529       529/529
(100 %)
0 diff
(100 %id)
BM737843 Ascites, stomach .c 495 to 1079 1 to 586       586/586
(100 %)
1 diff
(99.9 %id)
BM740688 Ascites, stomach .c 509 to 1017 1 to 509       509/509
(100 %)
0 diff
(100 %id)
BE018998 Kidney, renal cell adenocarcinoma .c 1717 to 2072 10 to 365   tiling clone,   356/365
(97 %)
6 diff
(98.4 %id)
BG253428 adenocarcinoma, cell line, Liver .c 2367 to 2998 1 to 629   tiling clone,   629/955
(65 %)
8 diff
(99.2 %id)
BI090439 cervix .c 2408 to 3029 1 to 621       621/621
(100 %)
7 diff
(98.9 %id)
BQ898217 ductal carcinoma, cell line, Pancreas .c 2423 to 3234 1 to 820       820/924
(88 %)
14 diff
(98.5 %id)
AA262204 germinal center B cell .c 2457 to 2704 1 to 248       248/252
(98 %)
6 diff
(97.7 %id)
BU521182 leiomyosarcoma, uterus .c 2462 to 3256 1 to 801   tiling clone,   801/902
(88 %)
6 diff
(99.4 %id)
BE207200 lung, small cell carcinoma .c 2491 to 2919 1 to 429       429/429
(100 %)
0 diff
(100 %id)
BM827540 Ascites, stomach .c 2825 to 3252 3 to 431       429/431
(99 %)
6 diff
(98.7 %id)
BU730879 eye, RPE and Choroid .c 2832 to 3552 737 to 19   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 719/725
(99 %)
4 diff
(99.5 %id)
BQ675671 epidermoid carcinoma, cell line, salivary gland .c 2834 to 3384 1 to 557       557/1142
(48 %)
35 diff
(97.0 %id)
BU623992 cell lines, Enchondroma .c 2855 to 3554 717 to 19   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 699/699
(100 %)
2 diff
(99.8 %id)
CA424647 cell lines, Chondrosarcoma .c 2857 to 3554 717 to 19   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 699/699
(100 %)
8 diff
(98.9 %id)
CB854733 lung .c 2889 to 3393 505 to 1       505/505
(100 %)
0 diff
(100 %id)
CA416832 Chondrosarcoma Cell line .c 2893 to 3551 677 to 19   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 659/659
(100 %)
2 diff
(99.7 %id)
CK126144 embryonic stem cell, Embryonic stem cell, pooled H7 ES cell line,passage 22 .c 2908 to 3457 33 to 583   AAA   551/679
(81 %)
6 diff
(99.2 %id)
BG958171 colon .c 2939 to 3338 30 to 432       403/432
(93 %)
6 diff
(98.7 %id)
AA215345 germinal center B cell .c 2944 to 3114 1 to 169       169/169
(100 %)
6 diff
(96.5 %id)
AA215522 germinal center B cell .c 2945 to 3213 1 to 268       268/268
(100 %)
2 diff
(99.3 %id)
AL048352 uterus .c 2982 to 3432 1 to 451       451/451
(100 %)
1 diff
(99.8 %id)
CN311923 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 2986 to 3338 1 to 353       353/353
(100 %)
1 diff
(99.8 %id)
BM153801 leukopheresis .c 2992 to 3478 488 to 1       488/489
(99 %)
24 diff
(95.1 %id)
CR998765 T-Lymphocytes .c 2996 to 3415 1 to 420       420/420
(100 %)
1 diff
(99.8 %id)
AI653022 pooled germ cell tumors .c 3061 to 3552 493 to 2   tiling clone,   492/493
(99 %)
0 diff
(100 %id)
AI567431 anaplastic oligodendroglioma, brain .c 3071 to 3552 483 to 2       482/483
(99 %)
0 diff
(100 %id)
BF089810 marrow .c 3075 to 3195 120 to 1       120/134
(89 %)
4 diff
(97.1 %id)
DB550329 hippocampus .c 3076 to 3550 1 to 475     Submitted on the opposite strand 475/477
(99 %)
12 diff
(97.5 %id)
AI862452 colon, colon tumor, RER+ .c 3076 to 3554 494 to 17   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 478/478
(100 %)
12 diff
(97.5 %id)
AI478477 Kidney .c 3095 to 3554 460 to 2       459/460
(99 %)
0 diff
(100 %id)
AA827537 colon, colon tumor .c 3106 to 3496 389 to 1       389/389
(100 %)
5 diff
(98.8 %id)
AI341880 pooled germ cell tumors .c 3106 to 3552 448 to 2       447/448
(99 %)
0 diff
(100 %id)
AI337383 colon, colon tumor, RER+ .c 3117 to 3552 440 to 2       439/440
(99 %)
0 diff
(100 %id)
AW083005 colon, moderately differentiated adenocarcinoma .c 3131 to 3552 423 to 1       423/423
(100 %)
7 diff
(98.4 %id)
H41554 brain .c 3137 to 3554 437 to 19       419/437
(95 %)
0 diff
(100 %id)
AA742392 germinal center B cell .c 3148 to 3552 421 to 20   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 402/402
(100 %)
5 diff
(98.8 %id)
AI271416 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 3153 to 3553 401 to 1       401/401
(100 %)
1 diff
(99.8 %id)
AI673000 thymus, pooled .c 3167 to 3551 389 to 5       385/390
(98 %)
0 diff
(100 %id)
AI559597 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 3175 to 3555 385 to 5   tiling clone,   381/385
(98 %)
0 diff
(100 %id)
AA984922 Spleen .c 3180 to 3552 374 to 1       374/374
(100 %)
5 diff
(98.7 %id)
H41495 brain .c 3186 to 3536 350 to 1       350/354
(98 %)
6 diff
(98.4 %id)
AI867783 pooled germ cell tumors .c 3197 to 3552 359 to 2       358/359
(99 %)
0 diff
(100 %id)
AI672997 thymus, pooled .c 3197 to 3551 360 to 5       356/360
(98 %)
0 diff
(100 %id)
AI203540 heart .c 3200 to 3552 358 to 6       353/358
(98 %)
0 diff
(100 %id)
AA864994 Kidney .c 3211 to 3552 352 to 12   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 341/341
(100 %)
4 diff
(98.9 %id)
CR992649 T-Lymphocytes .c 3219 to 3552 1 to 334   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 334/334
(100 %)
0 diff
(100 %id)
AA973881 pooled germ cell tumors .c 3222 to 3553 345 to 17   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 329/329
(100 %)
6 diff
(98.2 %id)
AI651220 pooled germ cell tumors .c 3272 to 3552 287 to 7       281/287
(97 %)
0 diff
(100 %id)
CR983239 T-Lymphocytes .c 3277 to 3552 1 to 277   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 277/277
(100 %)
1 diff
(99.7 %id)
M78858   .c 3282 to 3540 260 to 1       260/261
(99 %)
2 diff
(99.3 %id)
AA262205 germinal center B cell .c 3287 to 3554 269 to 3       267/269
(99 %)
0 diff
(100 %id)
BU166263 melanotic melanoma, skin .c 3293 to 3552 1 to 260   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 260/260
(100 %)
0 diff
(100 %id)
BP388453 pancreatic islet .c 3296 to 3552 1 to 257     Submitted on the opposite strand 257/257
(100 %)
2 diff
(99.3 %id)
AI394713 B-cell, chronic lymphotic leukemia .c 3296 to 3551 254 to 1       254/254
(100 %)
1 diff
(99.7 %id)
AA215419 germinal center B cell .c 3304 to 3554 249 to 1       249/249
(100 %)
2 diff
(99.2 %id)
R88942 brain .c 3310 to 3552 240 to 1     Submitted on the opposite strand 240/240
(100 %)
3 diff
(98.8 %id)
AI768521 Kidney .c 3328 to 3552 250 to 26   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 225/231
(97 %)
2 diff
(99.2 %id)
AI000903 breast .c 3329 to 3552 246 to 25   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 222/222
(100 %)
6 diff
(97.3 %id)
AI968367 pooled germ cell tumors .c 3336 to 3552 224 to 8       217/224
(96 %)
0 diff
(100 %id)
AI359483 pooled germ cell tumors .c 3338 to 3555 222 to 5       218/222
(98 %)
0 diff
(100 %id)
AA469064 colon .c 3344 to 3551 211 to 6       206/211
(97 %)
0 diff
(100 %id)
AW002366 pooled germ cell tumors .c 3345 to 3552 215 to 8       208/215
(96 %)
0 diff
(100 %id)
AW298591   .c 3345 to 3553 226 to 18   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 209/209
(100 %)
0 diff
(100 %id)
BE350725 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .c 3345 to 3552 208 to 1       208/208
(100 %)
0 diff
(100 %id)
BE672475 pooled germ cell tumors .c 3345 to 3554 221 to 12   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 210/211
(99 %)
0 diff
(100 %id)
BE676020 B-cell, chronic lymphotic leukemia .c 3345 to 3552 210 to 3       208/210
(99 %)
0 diff
(100 %id)
BF057009 pooled germ cell tumors .c 3345 to 3552 209 to 2       208/209
(99 %)
0 diff
(100 %id)
AW026836 brain, glioblastoma (pooled) .c 3346 to 3551 206 to 1       206/206
(100 %)
0 diff
(100 %id)
AI989374 thymus, pooled .c 3346 to 3552 209 to 3       207/209
(99 %)
0 diff
(100 %id)
BE646443 B-cell, chronic lymphotic leukemia .c 3346 to 3553 211 to 4       208/211
(98 %)
0 diff
(100 %id)
BM987433 mixed .c 3346 to 3555 228 to 19   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 210/210
(100 %)
0 diff
(100 %id)
AI288882 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 3348 to 3551 204 to 1       204/206
(99 %)
3 diff
(98.6 %id)
BM193507 leukopheresis .c 3349 to 3552 220 to 17   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 204/204
(100 %)
2 diff
(99.1 %id)
CN311932 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 3353 to 3552 216 to 14     Submitted on the opposite strand 203/216
(93 %)
0 diff
(100 %id)
AW235973 Kidney .c 3353 to 3537 183 to 1       183/194
(94 %)
4 diff
(98.0 %id)
AW615638 lung, small cell carcinoma .c 3358 to 3552 204 to 10       195/204
(95 %)
0 diff
(100 %id)
BI001527 head_normal .c 3360 to 3463 102 to 1       102/102
(100 %)
2 diff
(98.1 %id)
AW439472 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 3362 to 3551 191 to 2       190/191
(99 %)
0 diff
(100 %id)
AI290389 placenta .c 3364 to 3552 196 to 8       189/198
(95 %)
0 diff
(100 %id)
AA215367 germinal center B cell .c 3367 to 3554 192 to 4       189/192
(98 %)
0 diff
(100 %id)
AW779640 colon, moderately-differentiated adenocarcinoma .c 3378 to 3552 176 to 2       175/176
(99 %)
0 diff
(100 %id)
AA977068 pooled germ cell tumors .c 3384 to 3555 193 to 22   AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 172/172
(100 %)
1 diff
(99.5 %id)
CV311621 marrow .c 3394 to 3544 15 to 163       149/163
(91 %)
6 diff
(96.4 %id)
BE208412 Kidney, renal cell adenocarcinoma .c 3397 to 3553 160 to 4       157/160
(98 %)
0 diff
(100 %id)
DR759939 embryonic stem .c 3420 to 3550 146 to 16     Submitted on the opposite strand 131/146
(89 %)
0 diff
(100 %id)
AK225774 brain .d 1 to 3337 1 to 3337 exact tiling clone,   3337/3337
(100 %)
2 diff
(100.0 %id)
CB959911 Human Placenta, placenta .e 1 to 607 28 to 639   tiling clone,   612/741
(82 %)
18 diff
(97.6 %id)
NM_003646.3   .e 1 to 3656 1 to 3656 exact RefSeq,   3656/3659
(99 %)
5 diff
(99.9 %id)
BM921016 pooled brain, lung, testis .e 61 to 530 64 to 536       473/1244
(38 %)
17 diff
(98.7 %id)
BU849628 ovary, teratocarcinoma, cell line .e 64 to 891 1 to 835       835/911
(91 %)
20 diff
(97.9 %id)
CT002597 T-Lymphocytes .e 77 to 586 1 to 510       510/511
(99 %)
1 diff
(99.9 %id)
CR988552 T-Lymphocytes .e 77 to 496 1 to 420       420/421
(99 %)
3 diff
(99.3 %id)
BM737855 Ascites, stomach .e 79 to 514 1 to 436       436/436
(100 %)
4 diff
(99.1 %id)
BM458840 lymph, lymphoma, cell line .e 92 to 896 7 to 819       813/1134
(71 %)
13 diff
(98.9 %id)
DA126809 cerebellum .e 128 to 709 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA757243   .e 128 to 608 2 to 483   capped   482/482
(100 %)
1 diff
(99.8 %id)
BM737575 Ascites, stomach .e 130 to 459 1 to 331       331/331
(100 %)
4 diff
(98.8 %id)
CR985811 T-Lymphocytes .e 131 to 511 1 to 381       381/381
(100 %)
1 diff
(99.8 %id)
CR987818 T-Lymphocytes .e 146 to 579 1 to 434       434/434
(100 %)
1 diff
(99.8 %id)
DB221146 trachea .e 146 to 696 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA335449 hippocampus .e 148 to 724 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA403529 thalamus .e 154 to 458 165 to 469   capped   305/468
(65 %)
7 diff
(98.6 %id)
DA855876 placenta .e 154 to 712 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DB285693 uterus .e 155 to 499 2 to 346   capped   345/345
(100 %)
1 diff
(99.8 %id)
BG699111 brain, hippocampus .e 171 to 826 1 to 659       658/659
(99 %)
12 diff
(98.2 %id)
BC041770 Brain, hippocampus .e 177 to 3646 1 to 3470 Q524K tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 3470/3472
(99 %)
4 diff
(99.9 %id)
DB481509 hippocampus .e 179 to 655 1 to 478       478/478
(100 %)
5 diff
(99.0 %id)
DB483431 hippocampus .e 179 to 639 1 to 461       461/461
(100 %)
2 diff
(99.6 %id)
AK312398 amygdala .e 183 to 3044 1 to 2863 P252L S569T L570F A571G A572R ... tiling clone,   2863/2863
(100 %)
4 diff
(99.9 %id)
DA186894 amygdala .e 184 to 734 2 to 552   capped   551/553
(99 %)
1 diff
(99.9 %id)
DA190881 amygdala .e 184 to 785 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
DA191815 amygdala .e 184 to 748 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA194188 amygdala .e 184 to 706 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
DA194873 amygdala .e 184 to 650 2 to 468   capped   467/468
(99 %)
1 diff
(99.8 %id)
DA227008 brain .e 184 to 741 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA232966 brain .e 184 to 727 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DA237544 brain .e 184 to 724 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA238349 brain .e 184 to 734 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DA301255 hippocampus .e 184 to 755 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA312949 hippocampus .e 184 to 585 2 to 404   capped   403/403
(100 %)
2 diff
(99.6 %id)
DA313659 hippocampus .e 184 to 707 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
DA328060 hippocampus .e 184 to 734 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
DA338862 hippocampus .e 184 to 663 2 to 481   capped   480/480
(100 %)
0 diff
(100 %id)
DA339769 hippocampus .e 184 to 780 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA339954 hippocampus .e 184 to 724 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
BQ948670 epidermoid carcinoma, cell line, lung .e 184 to 1013 1 to 831       831/943
(88 %)
4 diff
(99.6 %id)
DB096220 testis .e 184 to 755 2 to 573   capped   572/573
(99 %)
0 diff
(100 %id)
DA103751 cerebellum .e 186 to 724 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DA317211 hippocampus .e 186 to 719 2 to 544   capped   543/543
(100 %)
11 diff
(98.0 %id)
DA388024 thalamus .e 189 to 779 2 to 595   capped   594/594
(100 %)
4 diff
(99.4 %id)
CR735602 lymph, lymphoma, cell line .e 194 to 711 28 to 546       519/546
(95 %)
7 diff
(98.8 %id)
BQ056710 lymph, lymphoma, cell line .e 204 to 960 1 to 766       764/1070
(71 %)
26 diff
(97.6 %id)
BQ058483 lymph, lymphoma, cell line .e 204 to 1079 1 to 889       889/1052
(84 %)
27 diff
(97.5 %id)
DA221770 brain .e 349 to 847 2 to 501   capped   500/500
(100 %)
1 diff
(99.8 %id)
DA390735 thalamus .e 358 to 942 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA889841   .e 371 to 930 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DR002688 fetal brain .f 1 to 631 1 to 632   tiling clone,   632/632
(100 %)
8 diff
(98.8 %id)
U51477   .f 161 to 3642 1 to 3482 exact tiling clone,   3482/3490
(99 %)
1 diff
(100.0 %id)
DA189207 amygdala .f 178 to 715 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
DA247612 brain .f 178 to 771 2 to 595   capped   594/594
(100 %)
2 diff
(99.7 %id)
AL043657 testis .f 191 to 762 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
BE531112 adenocarcinoma, Pancreas .f 269 to 1053 1 to 782       782/833
(93 %)
18 diff
(97.9 %id)
CN311930 embryonic stem cells, cell lines H1, H7, andH9 .f 289 to 847 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DA743983   .f 295 to 838 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
DA193294 amygdala .f 352 to 939 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
AL043658 testis .f 3429 to 3625 197 to 1       197/197
(100 %)
0 diff
(100 %id)
AK294888 brain .g 1 to 3212 2 to 3213 G283W A572S tiling clone,   3213/3213
(100 %)
2 diff
(100.0 %id)
AK300577   .h 1 to 2860 1 to 2860 exact tiling clone,   2860/2860
(100 %)
0 diff
(100 %id)
DC384314   .h 1 to 543 1 to 543       543/543
(100 %)
0 diff
(100 %id)
AK303322 thymus .i 1 to 2921 2 to 2922 G13C tiling clone,   2922/2922
(100 %)
1 diff
(100.0 %id)
DC407934 thymus .i 1 to 537 2 to 538       538/538
(100 %)
1 diff
(99.9 %id)
CR980226 T-Lymphocytes .i 2010 to 2671 1 to 663       663/667
(99 %)
2 diff
(99.8 %id)
CA488460   .i 2242 to 2761 1 to 523       523/860
(60 %)
16 diff
(98.2 %id)
BF848278 lung_normal .i 2474 to 2812 19 to 356       338/356
(94 %)
6 diff
(98.4 %id)
BX648433 human salivary gland .j 1 to 3513 1 to 3513 E189G tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 3513/3513
(100 %)
2 diff
(100.0 %id)
DB155182 thymus .j 510 to 1103 2 to 596   capped   595/595
(100 %)
2 diff
(99.7 %id)
DA829376 placenta .k 1 to 706 2 to 715   tiling clone, capped   714/746
(95 %)
10 diff
(98.7 %id)
BM729322 eye, fetal eye .k 417 to 934 1 to 519   tiling clone, Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 519/519
(100 %)
1 diff
(99.9 %id)
BU741843 eye, fetal eye .k 1664 to 2298 656 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 638/638
(100 %)
3 diff
(99.6 %id)
DB374172 placenta .k 2046 to 2297 252 to 1   tiling clone,   252/252
(100 %)
8 diff
(96.9 %id)
DA570097 whole embryo, mainly head .l 1 to 823 2 to 826   tiling clone, capped   825/826
(99 %)
11 diff
(98.7 %id)
AB209635 Spleen .l 173 to 5908 1 to 5735 exact tiling clone,   5735/5735
(100 %)
7 diff
(99.9 %id)
CN359739 embryonic stem cells, cell lines H1, H7, andH9 .l 451 to 973 1 to 523       523/523
(100 %)
0 diff
(100 %id)
AW732849 choriocarcinoma, placenta .l 458 to 929 1 to 472       472/472
(100 %)
5 diff
(99.0 %id)
BE900490 choriocarcinoma, placenta .l 463 to 1150 1 to 687       687/687
(100 %)
1 diff
(99.9 %id)
AV709934 adrenal gland .l 748 to 1396 1 to 646       646/646
(100 %)
7 diff
(99.0 %id)
DB356835 whole embryo, mainly head .l 978 to 1537 560 to 1       560/563
(99 %)
6 diff
(99.0 %id)
BE207782 choriocarcinoma, placenta .l 1074 to 1536 465 to 3       463/465
(99 %)
0 diff
(100 %id)
AA564714 germ cell tumor .l 1119 to 1537 419 to 1       419/419
(100 %)
0 diff
(100 %id)
CR998716 T-Lymphocytes .l 1508 to 1884 1 to 377       377/377
(100 %)
6 diff
(98.5 %id)
DA214329 brain .l 1545 to 2085 2 to 542   tiling clone, capped   541/541
(100 %)
0 diff
(100 %id)
BX649190 human small intestine .l 4179 to 5906 1 to 1727   available from DKFZ, AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 1727/1727
(100 %)
5 diff
(99.8 %id)
CR984957 T-Lymphocytes .l 4197 to 4786 1 to 591       591/598
(98 %)
2 diff
(99.7 %id)
AA252418 germinal center B cell .l 4562 to 5087 1 to 526     Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 526/526
(100 %)
0 diff
(100 %id)
CN311920 embryonic stem cells, cell lines H1, H7, andH9 .l 4739 to 5411 1 to 673       673/673
(100 %)
1 diff
(99.9 %id)
AA252502 germinal center B cell .l 5642 to 5909 293 to 27   tiling clone, AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 267/267
(100 %)
5 diff
(98.2 %id)
DA489010 brain .m 1 to 562 2 to 563   tiling clone, capped   562/562
(100 %)
0 diff
(100 %id)
DB137925.
matches multiple genes
thymus .m 380 to 921 2 to 543   tiling clone, capped Suspected internal deletion, this clone was ignored, also hits gene LOC400126 542/542
(100 %)
1 diff
(99.9 %id)
DC382539 placenta .n 1 to 664 2 to 665   tiling clone,   665/665
(100 %)
0 diff
(100 %id)
DA672569   .n 1 to 604 2 to 605   capped   604/604
(100 %)
1 diff
(99.9 %id)
DA456250 tongue, tumor tissue .n 3 to 557 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB102168 thymus .n 3 to 547 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
BG473772 eye, retinoblastoma .n 17 to 560 1 to 545       545/546
(99 %)
11 diff
(98.0 %id)
BG773579 choriocarcinoma, placenta .n 17 to 476 1 to 461       461/461
(100 %)
4 diff
(99.2 %id)
BP237209 coronary artery .n 18 to 596 1 to 582       580/582
(99 %)
6 diff
(99.0 %id)
BP320684 placenta .n 20 to 600 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA369522 subthalamic nucleus .n 581 to 1156 2 to 576   tiling clone, capped   575/575
(100 %)
1 diff
(99.9 %id)
AA297129   .n 1149 to 1435 1 to 287   tiling clone,   287/287
(100 %)
0 diff
(100 %id)
DA202266 brain .o 1 to 585 2 to 586   tiling clone, capped   585/585
(100 %)
0 diff
(100 %id)
DA381752 thalamus .o 84 to 642 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
CX868955 embryonic stem .o 330 to 1125 1 to 796   tiling clone,   796/796
(100 %)
4 diff
(99.5 %id)
CX868880 embryonic stem .o 1260 to 1887 654 to 27   tiling clone, AAA   628/628
(100 %)
6 diff
(99.1 %id)
AK097960 thymus .o 1743 to 3741 1 to 1999   tiling clone, available from FLJ,   1999/1999
(100 %)
1 diff
(100.0 %id)
AK123378 caudate nucleus .p 1 to 1785 1 to 1785 exact tiling clone, available from FLJ,   1785/1785
(100 %)
1 diff
(100.0 %id)
DA262183 caudate nucleus .p 2 to 554 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB306726 caudate nucleus .p 1263 to 1785 524 to 1       524/524
(100 %)
2 diff
(99.7 %id)
BE280398 choriocarcinoma, placenta .q 1 to 634 1 to 659 R18S Q19A M20D W21V R22A ... tiling clone,   653/723
(90 %)
34 diff
(95.3 %id)
BF892257 marrow .r 1 to 335 373 to 37   tiling clone, Submitted on the opposite strand 337/395
(85 %)
0 diff
(100 %id)
CR988689 T-Lymphocytes .r 310 to 815 1 to 505   tiling clone,   505/511
(98 %)
3 diff
(99.5 %id)
AK124693 amygdala .s 1 to 3675 5 to 3679 exact tiling clone, available from FLJ,   3679/3679
(100 %)
2 diff
(100.0 %id)
DA186218 amygdala .s 1 to 528 5 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
BX340138 Placenta Cot 25-normalized .s 547 to 1529 982 to 1       982/982
(100 %)
9 diff
(99.1 %id)
BQ222942 embryonal carcinoma, cell line, testis .s 557 to 1337 1 to 787       787/801
(98 %)
8 diff
(99.1 %id)
AW939059 denis_drash .s 757 to 1141 8 to 387       380/387
(98 %)
6 diff
(98.5 %id)
BX644699   .s 801 to 1337 1 to 537       537/537
(100 %)
29 diff
(94.6 %id)
BX352134 Placenta Cot 25-normalized .s 891 to 1587 695 to 1       695/864
(80 %)
27 diff
(96.9 %id)
BU070943 insulinoma, Pancreas .s 988 to 1594 1 to 607       607/610
(99 %)
6 diff
(99.1 %id)
AW380163 head_neck .s 1079 to 1337 1 to 262       262/266
(98 %)
13 diff
(95.2 %id)
BE830730 marrow .s 1135 to 1450 1 to 339       339/339
(100 %)
22 diff
(93.6 %id)
AI567554 adenocarcinoma, Pancreas .s 1153 to 1584 442 to 11   AAA   432/432
(100 %)
0 diff
(100 %id)
AI566164 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .s 1200 to 1594 395 to 1       395/395
(100 %)
2 diff
(99.5 %id)
AI446626 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .s 1210 to 1589 380 to 1       380/380
(100 %)
3 diff
(99.3 %id)
BQ336458 marrow .s 1226 to 1561 1 to 338       338/340
(99 %)
10 diff
(97.1 %id)
AW468443 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .s 1226 to 1591 366 to 1   tiling clone,   366/366
(100 %)
0 diff
(100 %id)
BM828440 stomach .s 1252 to 1446 1 to 195       195/195
(100 %)
0 diff
(100 %id)
BU940044 mixed (pool of 40 RNAs) .s 1261 to 1575 1 to 315   AAA   315/315
(100 %)
2 diff
(99.4 %id)
DB112721 thymus .s 1446 to 2003 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA291435 hippocampus .s 1452 to 2041 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DA466059   .s 1636 to 2167 2 to 533   tiling clone, capped   532/532
(100 %)
0 diff
(100 %id)
DB303160 amygdala .s 3192 to 3675 484 to 1       484/484
(100 %)
1 diff
(99.8 %id)
DB165565 thymus .t 1 to 591 2 to 593 G29X A30G R31Q L32A P33A ... tiling clone, capped   592/592
(100 %)
1 diff
(99.9 %id)
BX504123   .u 1 to 538 1 to 538 G20D tiling clone,   538/538
(100 %)
2 diff
(99.7 %id)
DA134977 alzheimer cortex .va 1 to 564 2 to 565 exact tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
BF669475 brain, primitive neuroectoderm .vb 1 to 576 1 to 576 L104* tiling clone,   576/865
(66 %)
15 diff
(98.3 %id)
BF667689 brain, primitive neuroectoderm .vb 1 to 608 1 to 606 exact tiling clone,   606/608
(99 %)
3 diff
(99.6 %id)
BF668136 brain, primitive neuroectoderm .vb 1 to 679 1 to 675 L143S T144L D145I tiling clone,   675/826
(81 %)
19 diff
(97.7 %id)
C18305 placenta .vc 1 to 444 1 to 441 L7W A8P R9E F11S P12R ... tiling clone,   441/441
(100 %)
6 diff
(98.7 %id)
AA205207   .vd-u 1 to 424 1 to 429 E83* tiling clone,   429/429
(100 %)
10 diff
(97.7 %id)
DC381348 placenta .ve 1 to 576 2 to 577 W36R tiling clone,   577/577
(100 %)
1 diff
(99.9 %id)
DA239333 brain .vf 1 to 581 2 to 582   tiling clone, capped   581/581
(100 %)
0 diff
(100 %id)
DA888359   .vg 1 to 572 2 to 573   tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
DB161393 thymus .vh 1 to 567 2 to 568   tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
DA221593 brain .vi 1 to 541 2 to 542 exact tiling clone, capped   541/541
(100 %)
0 diff
(100 %id)
BF738027 bladder_tumor .vj 1 to 243 257 to 14 L17P N18E I19H R21Q Y22V ... tiling clone, Submitted on the opposite strand 244/257
(94 %)
1 diff
(99.7 %id)
BI021110 marrow .vk-u 1 to 290 290 to 1 S71A tiling clone,   290/290
(100 %)
2 diff
(99.4 %id)
CV414138 nervous_tumor .vk-u 227 to 739 15 to 527   tiling clone,   513/535
(95 %)
2 diff
(99.7 %id)
DA325679 hippocampus .vl 1 to 616 2 to 619 exact tiling clone, capped   618/618
(100 %)
2 diff
(99.7 %id)
BQ948701 epidermoid carcinoma, cell line, lung .vm -9 to 412 1 to 422 exact tiling clone,   422/1278
(33 %)
7 diff
(99.5 %id)
AK293615 cerebellum Gene DGKZ, variant not shown         Suspected internal deletion, this clone was ignored    
DC304547 cerebellum Gene DGKZ, variant not shown         Suspected internal deletion, this clone was ignored    
DA188457 amygdala Gene DGKZ, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB305506 brain Gene DGKZ, variant not shown              
DA231816 brain Gene DGKZ, variant not shown       capped      
CN311922 embryonic stem cells, cell lines H1, H7, andH9 Gene DGKZ, variant not shown         Suspected internal deletion, this clone was ignored    
DA454718 tongue, tumor tissue Gene DGKZ, variant not shown       capped Suspected internal deletion, this clone was ignored    
AI671016 pooled germ cell tumors Gene DGKZ, variant not shown         Suspected internal deletion, this clone was ignored    
BF984928 duodenal adenocarcinoma, cell line, small intestine Gene DGKZ, variant not shown         This clone was ignored    
BQ224573 large cell carcinoma, lung Gene DGKZ, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BU930968 ovary, teratocarcinoma, cell line Gene DGKZ, variant not shown         Suspected internal deletion, this clone was ignored    
BP311790 brain Gene DGKZ, variant not shown         Suspected internal deletion, this clone was ignored    
CR983473 T-Lymphocytes Gene DGKZ, variant not shown         Suspected internal deletion, this clone was ignored    
DB139195 thymus Gene DGKZ, variant not shown       capped      
DB151800 thymus Gene DGKZ, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd-u, .ve, .vf, .vg, .vh, .vi, .vj, .vk-u, .vl, .vm Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI