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Gene DGCR6LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
222 supporting clones for gene DGCR6L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK310899 trachea .a 1 to 1418 1 to 1418 exact tiling clone,   1418/1418
(100 %)
1 diff
(100.0 %id)
BJ994106 hepatoblastoma .a 35 to 508 1 to 474   tiling clone,   474/474
(100 %)
0 diff
(100 %id)
BM873326 stomach .a 1051 to 1636 1 to 586   tiling clone,   586/586
(100 %)
3 diff
(99.5 %id)
BJ994107 hepatoblastoma .a 1211 to 1620 410 to 1   tiling clone,   410/410
(100 %)
0 diff
(100 %id)
NM_033257.3   .b 1 to 1217 1 to 1217 exact RefSeq,   1217/1217
(100 %)
0 diff
(100 %id)
AF228708   .b 21 to 1169 1 to 1149 G14S tiling clone,   1149/1149
(100 %)
2 diff
(99.9 %id)
CB108517 Liver .b 26 to 301 1 to 277       277/277
(100 %)
1 diff
(99.7 %id)
DC417104 trachea .b 26 to 590 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
BM829169 Ascites, stomach .b 30 to 140 1 to 111       111/111
(100 %)
1 diff
(99.1 %id)
BF569682 Kidney, renal carcinoma (ascites) .b 40 to 596 1 to 556   fully sequenced,   556/556
(100 %)
3 diff
(99.5 %id)
BG425409 Kidney, renal cell adenocarcinoma .b 41 to 823 1 to 772 H110T N111T L112C P113L V114W ...     772/981
(78 %)
23 diff
(97.7 %id)
BG527126 lung, mucoepidermoid carcinoma .b 44 to 557 1 to 522       522/656
(79 %)
19 diff
(97.2 %id)
BU595319 mixed (pool of 40 RNAs) .b 50 to 529 1 to 488       488/957
(50 %)
15 diff
(98.5 %id)
DA194303 amygdala .b 54 to 624 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
CB128236 Liver .b 55 to 408 1 to 354       354/354
(100 %)
3 diff
(99.2 %id)
BU185469 ductal carcinoma, cell line, Pancreas .b 56 to 1008 1 to 955 exact     955/976
(97 %)
18 diff
(98.2 %id)
BQ669812 epidermoid carcinoma, cell line, salivary gland .b 58 to 381 1 to 324       324/1409
(22 %)
11 diff
(99.3 %id)
BG546619 lung .b 59 to 861 1 to 806 T168N N169Q Q171T E172G L173A ...     806/807
(99 %)
10 diff
(98.8 %id)
AK001528   .b 60 to 1176 1 to 1117 Q81R available from FLJ,   1117/1117
(100 %)
2 diff
(99.9 %id)
BG248097 adenocarcinoma cell line, colon .b 61 to 853 1 to 788 R192G A193Q N195M A196Q A197P ...     788/918
(85 %)
20 diff
(97.9 %id)
AU129771   .b 61 to 718 2 to 664   fully sequenced, capped   663/663
(100 %)
8 diff
(98.8 %id)
BG724084 testis .b 63 to 772 1 to 709       709/719
(98 %)
7 diff
(99.1 %id)
BQ646983 hepatocellular carcinoma, cell line, Liver .b 63 to 631 1 to 569       569/1085
(52 %)
10 diff
(99.1 %id)
BQ650586 hepatocellular carcinoma, cell line, Liver .b 63 to 784 1 to 718 N169H Q187H A193G A197P L198W ...     718/933
(76 %)
21 diff
(97.8 %id)
N90663 liver and spleen .b 64 to 311 1 to 248       248/248
(100 %)
9 diff
(96.4 %id)
BC000682 Colon, adenocarcinoma .b 65 to 1176 1 to 1112 exact tiling clone, available from MGC, AAA   1112/1112
(100 %)
0 diff
(100 %id)
BQ711281 Spleen .b 66 to 737 1 to 674       674/1028
(65 %)
12 diff
(98.9 %id)
DA902752   .b 66 to 590 2 to 527   capped   526/526
(100 %)
1 diff
(99.9 %id)
DA898905 skeletal muscle .b 68 to 630 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
BI193580 epithelioid carcinoma cell line, Pancreas .b 70 to 697 1 to 627       627/787
(79 %)
11 diff
(98.7 %id)
BG425164 Kidney, renal cell adenocarcinoma .b 72 to 786 1 to 715 C191L R192P A193G G194R N195E ...     715/715
(100 %)
8 diff
(98.9 %id)
BE899351 adenocarcinoma cell line, ovary .b 75 to 870 10 to 796 S37R S38L Q40P Q41A R42A ...     787/939
(83 %)
25 diff
(97.4 %id)
BG829404 muscle, rhabdomyosarcoma .b 75 to 840 37 to 812 R3A Y4L A5R A6G R97P ...     776/1183
(65 %)
30 diff
(97.5 %id)
CN409836 embryonic stem cells, cell lines H1, H7, andH9 .b 77 to 288 1 to 212       212/212
(100 %)
1 diff
(99.6 %id)
BE746077 adenocarcinoma cell line, ovary .b 77 to 765 1 to 690       690/853
(80 %)
14 diff
(98.4 %id)
DN991473 brain, whole brain .b 77 to 681 1 to 605       605/605
(100 %)
5 diff
(99.2 %id)
BF686568 leiomyosarcoma cell line, uterus .b 78 to 775 1 to 679       679/913
(74 %)
21 diff
(97.7 %id)
BG705602 brain, hypothalamus .b 78 to 728 1 to 651       651/651
(100 %)
6 diff
(99.1 %id)
BG328357 adenocarcinoma cell line, colon .b 82 to 854 1 to 769 L67Y L68W E69R I70S Q71S ...     769/969
(79 %)
22 diff
(97.8 %id)
BG387119 adenocarcinoma cell line, colon .b 82 to 874 1 to 788 Q210S C211V D212T Q213R G215A ... AAA   788/1026
(76 %)
13 diff
(98.8 %id)
AK289952 hippocampus .b 83 to 1213 1 to 1131 exact tiling clone,   1131/1131
(100 %)
2 diff
(99.9 %id)
CR621073 Placenta Cot 25-normalized .b 83 to 1154 1 to 1072 exact     1072/1072
(100 %)
0 diff
(100 %id)
DA307234 hippocampus .b 84 to 551 2 to 470   capped   469/469
(100 %)
2 diff
(99.6 %id)
BE304646 adenocarcinoma cell line, colon .b 84 to 749 1 to 661       661/702
(94 %)
11 diff
(98.5 %id)
ES314646.
matches multiple genes
occipital scalp hair, skin .b 90 to 220 1 to 124     also hits gene DGCR6 124/124
(100 %)
11 diff
(91.2 %id)
BG826191 muscle, rhabdomyosarcoma .b 94 to 819 1 to 747 A6G Q17*     747/747
(100 %)
34 diff
(95.5 %id)
BF307010 muscle, rhabdomyosarcoma .b 95 to 839 1 to 745 H110T N111T L112C P113L V114W ...     745/745
(100 %)
11 diff
(98.6 %id)
CR456361   .b 96 to 998 1 to 903 exact     903/903
(100 %)
0 diff
(100 %id)
BF308097 muscle, rhabdomyosarcoma .b 97 to 870 1 to 754 A7P L8G E9G E10G V11G ...     754/925
(81 %)
19 diff
(98.0 %id)
BG828717 muscle, rhabdomyosarcoma .b 97 to 1039 1 to 943 N169K P217L V218S P219H P220H     943/1029
(91 %)
32 diff
(96.9 %id)
BF308167 muscle, rhabdomyosarcoma .b 98 to 772 1 to 669       669/819
(81 %)
13 diff
(98.5 %id)
BG825016 muscle, rhabdomyosarcoma .b 98 to 849 1 to 758 A7P L8W E9R E10R V11W ...     758/759
(99 %)
20 diff
(97.4 %id)
AU099876   .b 102 to 402 1 to 300       300/300
(100 %)
6 diff
(98.0 %id)
BP272875   .b 102 to 673 1 to 571       571/571
(100 %)
23 diff
(96.0 %id)
CU013359 Synthetic constructs .b 109 to 777 11 to 679       669/694
(96 %)
7 diff
(99.0 %id)
CU013071 Synthetic constructs .b 109 to 783 11 to 685 exact     675/697
(96 %)
7 diff
(99.0 %id)
TI_1948090141   .b 117 to 474 132 to 489       358/386
(92 %)
6 diff
(98.5 %id)
TI_1948090277   .b 117 to 434 140 to 457       318/345
(92 %)
11 diff
(96.9 %id)
TI_1948090403   .b 117 to 474 131 to 488       358/385
(92 %)
6 diff
(98.5 %id)
CV025545 mixed .b 118 to 598 1 to 481       481/485
(99 %)
6 diff
(98.8 %id)
BE378683 endometrium, adenocarcinoma cell line, uterus .b 122 to 1067 1 to 940       940/1076
(87 %)
44 diff
(96.0 %id)
CN409835 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 124 to 736 1 to 613       613/613
(100 %)
0 diff
(100 %id)
AI862731 lymph node, lymphoma, follicular mixed small and largecell .b 129 to 659 1 to 531     Submitted on the opposite strand 531/532
(99 %)
26 diff
(95.2 %id)
AA131590 uterus .b 130 to 692 1 to 566     Submitted on the opposite strand 564/592
(95 %)
23 diff
(96.2 %id)
AA236555 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 130 to 681 1 to 552     Submitted on the opposite strand 552/552
(100 %)
4 diff
(99.3 %id)
AA463473 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 130 to 651 1 to 520     Submitted on the opposite strand 520/520
(100 %)
5 diff
(99.1 %id)
AI091331 pooled .b 130 to 600 1 to 471     Submitted on the opposite strand 471/471
(100 %)
0 diff
(100 %id)
AI185453 lung .b 130 to 444 1 to 315     Submitted on the opposite strand 315/315
(100 %)
1 diff
(99.7 %id)
AI198214 anaplastic oligodendroglioma, brain .b 130 to 894 1 to 762     Submitted on the opposite strand 762/762
(100 %)
27 diff
(96.5 %id)
AI245708 Kidney .b 130 to 727 1 to 597     Submitted on the opposite strand 597/597
(100 %)
9 diff
(98.5 %id)
AI290515 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 130 to 629 1 to 501     Submitted on the opposite strand 501/501
(100 %)
11 diff
(97.9 %id)
AI313487 lung .b 130 to 625 1 to 495     Submitted on the opposite strand 495/498
(99 %)
2 diff
(99.6 %id)
AI375052   .b 130 to 585 1 to 456     Submitted on the opposite strand 456/456
(100 %)
0 diff
(100 %id)
AI565841 anaplastic oligodendroglioma, brain .b 130 to 444 1 to 313     Submitted on the opposite strand 313/317
(98 %)
5 diff
(98.5 %id)
AI572641 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 130 to 651 1 to 522     Submitted on the opposite strand 522/522
(100 %)
3 diff
(99.5 %id)
AI702117 carcinoid, lung .b 130 to 444 1 to 315     Submitted on the opposite strand 315/321
(98 %)
1 diff
(99.7 %id)
AI828881 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 130 to 711 1 to 582     Submitted on the opposite strand 582/582
(100 %)
1 diff
(99.9 %id)
AI829058 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 130 to 708 1 to 579     Submitted on the opposite strand 579/579
(100 %)
1 diff
(99.9 %id)
AI829060 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 130 to 704 1 to 575     Submitted on the opposite strand 575/579
(99 %)
5 diff
(99.2 %id)
AI828114 anaplastic oligodendroglioma, brain .b 130 to 708 1 to 580     Submitted on the opposite strand 580/582
(99 %)
7 diff
(98.8 %id)
AW001417 colon, colonic mucosa from 3 patients with Crohn'sdisease .b 130 to 631 1 to 502     Submitted on the opposite strand 502/502
(100 %)
0 diff
(100 %id)
AW149742 brain, medulloblastoma .b 130 to 711 1 to 582     Submitted on the opposite strand 582/582
(100 %)
0 diff
(100 %id)
BE045648 carcinoid, lung .b 130 to 597 1 to 468     Submitted on the opposite strand 468/468
(100 %)
3 diff
(99.4 %id)
BF733000 fibrotheoma, ovary .b 130 to 551 1 to 422     Submitted on the opposite strand 422/423
(99 %)
8 diff
(98.2 %id)
TI_157596328   .b 130 to 864 60 to 795     Submitted on the opposite strand 736/798
(92 %)
53 diff
(93.4 %id)
TI_151737625   .b 130 to 894 41 to 803     Submitted on the opposite strand 763/1030
(74 %)
26 diff
(97.5 %id)
TI_151704618   .b 130 to 958 48 to 867   AAA Submitted on the opposite strand 820/1029
(79 %)
18 diff
(98.3 %id)
CN409832 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 131 to 489 1 to 358       358/358
(100 %)
4 diff
(98.9 %id)
CN409839 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 131 to 719 1 to 589       589/594
(99 %)
1 diff
(99.9 %id)
AA631156 colon, colon tumor RER+ .b 131 to 725 1 to 592     Submitted on the opposite strand 590/599
(98 %)
10 diff
(98.4 %id)
AW015192   .b 131 to 490 1 to 360     Submitted on the opposite strand 360/360
(100 %)
0 diff
(100 %id)
AI984694 colon, colonic mucosa from 3 patients with Crohn'sdisease .b 144 to 615 1 to 472     Submitted on the opposite strand 472/472
(100 %)
7 diff
(98.6 %id)
AI244431 Kidney .b 148 to 432 1 to 285     Submitted on the opposite strand 285/285
(100 %)
0 diff
(100 %id)
AI277550 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 148 to 447 1 to 300     Submitted on the opposite strand 300/300
(100 %)
2 diff
(99.4 %id)
AW418790 2 pooled tumors (clear cell type), Kidney .b 148 to 285 1 to 138     Submitted on the opposite strand 138/150
(92 %)
4 diff
(97.4 %id)
AI016764   .b 149 to 684 1 to 535     Submitted on the opposite strand 535/535
(100 %)
5 diff
(99.1 %id)
BG576611 breast, mammary adenocarcinoma, cell line .b 150 to 727 38 to 616       579/616
(93 %)
8 diff
(98.8 %id)
BG328551 adenocarcinoma cell line, colon .b 152 to 912 1 to 755       755/1002
(75 %)
12 diff
(98.9 %id)
AI741563 pooled .b 159 to 630 1 to 472     Submitted on the opposite strand 472/478
(98 %)
3 diff
(99.4 %id)
N75295 lung .b 160 to 396 1 to 235     Submitted on the opposite strand 235/243
(96 %)
9 diff
(96.3 %id)
AI073883 pooled .b 160 to 611 1 to 452     Submitted on the opposite strand 452/452
(100 %)
0 diff
(100 %id)
AI362780 anaplastic oligodendroglioma, brain .b 160 to 607 1 to 447     Submitted on the opposite strand 447/447
(100 %)
2 diff
(99.6 %id)
AI686423 Prostate .b 160 to 546 1 to 387     Submitted on the opposite strand 387/387
(100 %)
0 diff
(100 %id)
AI828882 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 160 to 711 1 to 552     Submitted on the opposite strand 552/552
(100 %)
1 diff
(99.9 %id)
AI831595 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 160 to 711 1 to 552     Submitted on the opposite strand 552/552
(100 %)
0 diff
(100 %id)
AI817277 normal prostate, Prostate .b 160 to 711 1 to 552     Submitted on the opposite strand 552/552
(100 %)
1 diff
(99.9 %id)
AA723994.
matches multiple genes
parathyroid gland, parathyroid tumor .b 162 to 338 26 to 199     Submitted on the opposite strand, also hits gene DGCR6 174/202
(86 %)
10 diff
(95.1 %id)
AW337694 Kidney .b 164 to 532 1 to 370     Submitted on the opposite strand 370/370
(100 %)
2 diff
(99.5 %id)
AW166481 cervix .b 164 to 597 1 to 435     Submitted on the opposite strand 435/476
(91 %)
6 diff
(98.8 %id)
AW182631 cervix, tumor .b 164 to 622 1 to 458     Submitted on the opposite strand 458/458
(100 %)
3 diff
(99.4 %id)
AW611753 Kidney .b 164 to 506 1 to 343     Submitted on the opposite strand 343/343
(100 %)
1 diff
(99.8 %id)
BF847209 lung_normal .b 170 to 532 362 to 1     Submitted on the opposite strand 362/388
(93 %)
4 diff
(99.0 %id)
AI269888 Kidney .b 170 to 699 1 to 530     Submitted on the opposite strand 530/530
(100 %)
1 diff
(99.9 %id)
H92597 pineal gland .b 196 to 445 1 to 249     Submitted on the opposite strand 249/251
(99 %)
7 diff
(97.3 %id)
AA033564 uterus .b 235 to 557 1 to 320     Submitted on the opposite strand 320/320
(100 %)
9 diff
(97.2 %id)
AA234615 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 242 to 683 439 to 1     Submitted on the opposite strand 439/439
(100 %)
8 diff
(98.2 %id)
AA131656 uterus .b 254 to 683 434 to 1     Submitted on the opposite strand 434/438
(99 %)
17 diff
(96.2 %id)
BG422452 Kidney, renal cell adenocarcinoma .b 262 to 960 1 to 691       691/854
(80 %)
14 diff
(98.4 %id)
AA890284.
matches multiple genes
parathyroid gland, parathyroid tumor .b 267 to 333 1 to 67     Submitted on the opposite strand, also hits gene DGCR6 67/67
(100 %)
2 diff
(97.1 %id)
CR598657 T cells (Jurkat cell line) Cot10-normalized .b 293 to 1174 1 to 882       882/882
(100 %)
0 diff
(100 %id)
BG023960 duodenal adenocarcinoma, cell line, small intestine .b 320 to 1105 1 to 778       778/986
(78 %)
38 diff
(96.2 %id)
BG698445 skin .b 320 to 1056 1 to 736       736/738
(99 %)
7 diff
(99.1 %id)
BE170070 head_neck .b 413 to 754 347 to 8     Submitted on the opposite strand 340/350
(97 %)
3 diff
(99.2 %id)
BI756826 brain .b 441 to 1178 1 to 738   AAA   738/738
(100 %)
8 diff
(99.0 %id)
TI_57220074   .b 441 to 1178 29 to 766   AAA   741/766
(96 %)
14 diff
(98.2 %id)
BE397208 Burkitt lymphoma, lymph .b 445 to 997 1 to 553       553/553
(100 %)
0 diff
(100 %id)
BE560470 Burkitt lymphoma, lymph .b 447 to 1171 1 to 724       724/726
(99 %)
17 diff
(97.7 %id)
BQ574676 Chondrosarcoma Grade II, Left Pelvis .b 460 to 1176 733 to 19   AAA   715/717
(99 %)
4 diff
(99.5 %id)
BU633305 cell lines, Chondrosarcoma .b 460 to 1176 734 to 19   AAA   716/717
(99 %)
1 diff
(99.9 %id)
BQ669528 epidermoid carcinoma, cell line, salivary gland .b 461 to 1176 1 to 716   AAA   716/716
(100 %)
10 diff
(98.7 %id)
AJ711194 heart .b 465 to 863 1 to 396       396/396
(100 %)
3 diff
(99.3 %id)
BI666884 brain, hypothalamus .b 471 to 1175 9 to 711   AAA   703/711
(98 %)
4 diff
(99.5 %id)
TI_44342907   .b 471 to 1175 93 to 795   AAA   703/795
(88 %)
10 diff
(98.8 %id)
TI_149292249   .b 483 to 1176 824 to 132   AAA   693/877
(79 %)
20 diff
(97.8 %id)
BX096129 lung .b 506 to 1176 681 to 12   AAA Submitted on the opposite strand 670/670
(100 %)
1 diff
(99.9 %id)
CT001814 T-Lymphocytes .b 509 to 1081 1 to 573       573/577
(99 %)
1 diff
(99.9 %id)
BU616477 Bone, Subchondral Bone .b 509 to 1178 687 to 19   AAA   669/669
(100 %)
2 diff
(99.8 %id)
TI_149309283   .b 510 to 1176 754 to 91   AAA   664/967
(68 %)
12 diff
(98.8 %id)
BQ217912 epithelioid carcinoma, Pancreas .b 522 to 1171 1 to 651       651/988
(65 %)
4 diff
(99.6 %id)
BQ027020 Chondrosarcoma, Left Pubic Bone .b 532 to 1176 663 to 19   AAA   645/645
(100 %)
3 diff
(99.6 %id)
AA321210 bone marrow .b 557 to 746 1 to 190       190/190
(100 %)
0 diff
(100 %id)
BF570431 Kidney, renal carcinoma (ascites) .b 566 to 1158 599 to 8   fully sequenced,   592/599
(98 %)
0 diff
(100 %id)
BM691245 eye, RPE and Choroid .b 567 to 1176 643 to 34   AAA Submitted on the opposite strand 610/610
(100 %)
2 diff
(99.7 %id)
BE743597 adenocarcinoma cell line, ovary .b 572 to 1174 1 to 603   AAA   603/603
(100 %)
3 diff
(99.6 %id)
BU948878 Pancreas, Purified pancreatic islet .b 592 to 840 267 to 19     Submitted on the opposite strand 249/267
(93 %)
0 diff
(100 %id)
AW582873 Islets of Langerhans, Pancreas .b 593 to 1017 1 to 425       425/425
(100 %)
0 diff
(100 %id)
AA578567 lung, lung tumor .b 595 to 1178 585 to 1       585/588
(99 %)
16 diff
(97.3 %id)
BQ015781 lung, Metastatic Chondrosarcoma .b 601 to 1176 594 to 19   AAA   576/576
(100 %)
1 diff
(99.9 %id)
BU948627 Pancreas, Purified pancreatic islet .b 606 to 840 1 to 235     Submitted on the opposite strand 235/282
(83 %)
2 diff
(99.3 %id)
AA621338   .b 613 to 1172 562 to 4       559/562
(99 %)
0 diff
(100 %id)
CA309620 Alveolar Macrophage, lung .b 625 to 1176 570 to 19   AAA   552/552
(100 %)
0 diff
(100 %id)
AI707885 aorta .b 626 to 1172 546 to 1       546/564
(96 %)
17 diff
(97.0 %id)
AW583958 Islets of Langerhans, Pancreas .b 626 to 1176 565 to 14   AAA   552/589
(93 %)
33 diff
(94.4 %id)
BF963098 nervous_normal .b 628 to 924 21 to 317       297/340
(87 %)
16 diff
(95.3 %id)
CN409837 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 628 to 1174 548 to 1     Submitted on the opposite strand 548/548
(100 %)
1 diff
(99.9 %id)
BU687693 lung .b 628 to 1176 566 to 19   AAA   548/557
(98 %)
5 diff
(99.2 %id)
BU741586 eye, fetal eye .b 628 to 1178 569 to 19   AAA   551/560
(98 %)
2 diff
(99.7 %id)
BM974447 lung .b 636 to 1176 559 to 19   AAA   541/541
(100 %)
13 diff
(97.6 %id)
BF957877 nervous_normal .b 645 to 924 12 to 290       279/303
(92 %)
2 diff
(99.4 %id)
BF956417 nervous_normal .b 659 to 1099 443 to 3       441/446
(98 %)
0 diff
(100 %id)
BM711644 eye, human retina .b 661 to 1178 539 to 22   AAA Submitted on the opposite strand 518/518
(100 %)
1 diff
(99.9 %id)
BF954620.
matches multiple genes
nervous_normal .b 666 to 1105 448 to 9     also hits gene DGCR6 440/453
(97 %)
0 diff
(100 %id)
AA534516 colon .b 685 to 1177 495 to 1       495/495
(100 %)
7 diff
(98.6 %id)
AU151847   .b 688 to 1176 489 to 1   fully sequenced,   489/489
(100 %)
13 diff
(97.4 %id)
BF955782 nervous_normal .b 690 to 921 362 to 131       232/363
(63 %)
0 diff
(100 %id)
AA988260 2 pooled tumors (clear cell type), Kidney .b 691 to 1183 495 to 5   tiling clone,   491/495
(99 %)
0 diff
(100 %id)
BM563801 astrocytoma grade IV, cell line, brain .b 692 to 1176 1 to 486       486/1034
(47 %)
5 diff
(99.6 %id)
AA227853 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 706 to 1073 366 to 1       366/366
(100 %)
8 diff
(97.9 %id)
AI277819.
matches multiple genes
placenta .b 706 to 1172 495 to 29   AAA also hits gene DGCR6 467/467
(100 %)
30 diff
(93.6 %id)
AI278109.
matches multiple genes
placenta .b 707 to 1172 493 to 29   AAA also hits gene DGCR6 465/466
(99 %)
40 diff
(91.5 %id)
DB555565.
matches multiple genes
hypothalamus .b 719 to 1176 1 to 459     Submitted on the opposite strand, also hits gene DGCR6 459/459
(100 %)
6 diff
(98.7 %id)
AA243795 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 725 to 1179 1 to 454   fully sequenced,   454/454
(100 %)
5 diff
(98.9 %id)
CX782882 human embryonic stem cells .b 742 to 1176 461 to 27   AAA Submitted on the opposite strand 435/435
(100 %)
15 diff
(96.6 %id)
AJ571795.
matches multiple genes
pectoral muscle (after mastectomy) .b 765 to 1101 13 to 347     also hits gene DGCR6 335/347
(96 %)
6 diff
(98.3 %id)
AJ572966.
matches multiple genes
pectoral muscle (after mastectomy) .b 767 to 1170 1 to 402     also hits gene DGCR6 402/402
(100 %)
1 diff
(99.8 %id)
F30425 pectoral muscle (after mastectomy) .b 767 to 1065 1 to 299       299/299
(100 %)
1 diff
(99.7 %id)
DB559903.
matches multiple genes
hypothalamus .b 775 to 1176 1 to 402     Submitted on the opposite strand, also hits gene DGCR6 402/402
(100 %)
2 diff
(99.6 %id)
AW592091 pooled .b 809 to 1179 371 to 1       371/371
(100 %)
0 diff
(100 %id)
F30765.
matches multiple genes
pectoral muscle (after mastectomy) .b 812 to 1177 1 to 364     also hits gene DGCR6 364/364
(100 %)
4 diff
(99.0 %id)
AA758964   .b 824 to 1171 352 to 5       348/353
(98 %)
0 diff
(100 %id)
BF756756.
matches multiple genes
colon .b 834 to 1093 279 to 17     Submitted on the opposite strand, also hits gene DGCR6 263/279
(94 %)
0 diff
(100 %id)
W04737 lung .b 844 to 1177 346 to 1     Submitted on the opposite strand 346/403
(85 %)
18 diff
(95.6 %id)
T92274 lung .b 845 to 1175 333 to 4       330/334
(98 %)
9 diff
(97.4 %id)
BP428603.
matches multiple genes
  .b 849 to 1176 7 to 334     also hits gene DGCR6 328/335
(97 %)
1 diff
(99.8 %id)
EC538838.
matches multiple genes
Prostate .b 859 to 963 1 to 105     also hits gene DGCR6 105/105
(100 %)
1 diff
(99.1 %id)
AW269042 pooled .b 860 to 1175 317 to 1       317/480
(66 %)
1 diff
(99.8 %id)
AA506840.
matches multiple genes
Prostate .b 870 to 1000 9 to 139     also hits gene DGCR6 131/139
(94 %)
6 diff
(95.7 %id)
BM728928 eye, fetal eye .b 888 to 1176 1 to 289   fully sequenced, AAA   289/289
(100 %)
0 diff
(100 %id)
AA740266 2 pooled tumors (clear cell type), Kidney .b 898 to 1175 313 to 36   AAA   278/278
(100 %)
0 diff
(100 %id)
AW088499 ovary, tumor, 5 pooled (see description) .b 911 to 1175 265 to 1       265/265
(100 %)
0 diff
(100 %id)
C15579   .b 913 to 1175 1 to 262       262/262
(100 %)
2 diff
(99.3 %id)
DW432909 Liver .b 924 to 1170 18 to 264       247/264
(93 %)
6 diff
(97.8 %id)
BG985875 denis_drash .b 948 to 1127 185 to 8       178/188
(94 %)
0 diff
(100 %id)
R09057 liver and spleen .b 949 to 1173 231 to 6       226/240
(94 %)
0 diff
(100 %id)
AA243676 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 960 to 1176 237 to 23   fully sequenced, AAA   215/215
(100 %)
0 diff
(100 %id)
EC490812.
matches multiple genes
Prostate .b 965 to 1053 1 to 87     also hits gene DGCR6 87/91
(95 %)
3 diff
(96.8 %id)
CR740198 lung .b 994 to 1176 194 to 12   AAA Submitted on the opposite strand 183/183
(100 %)
4 diff
(97.9 %id)
AA578552 lung, lung tumor .b 1019 to 1176 173 to 16   AAA   158/158
(100 %)
0 diff
(100 %id)
DV462576.
matches multiple genes
cochlea, ear .b 1076 to 1176 1 to 101   AAA also hits gene DGCR6 101/101
(100 %)
1 diff
(99.1 %id)
GD146626.
matches multiple genes
  .b 1108 to 1176 1 to 69   AAA also hits gene DGCR6 69/69
(100 %)
3 diff
(95.7 %id)
BU742949 eye, fetal eye .b 1110 to 1175 85 to 20   fully sequenced, AAA   66/66
(100 %)
0 diff
(100 %id)
BG764804 melanotic melanoma, high MDR (cell line), skin .c 1 to 881 1 to 895 C86Y A87R Y88L R89Q T90N ... tiling clone,   895/965
(92 %)
33 diff
(96.6 %id)
CR602164 Placenta Cot 25-normalized .d 1 to 822 1 to 822 exact tiling clone,   822/822
(100 %)
0 diff
(100 %id)
BX380234 Placenta Cot 25-normalized .d 1 to 822 1 to 820 A37V N115K fully sequenced,   820/820
(100 %)
3 diff
(99.7 %id)
BX380233 Placenta Cot 25-normalized .d 2 to 788 786 to 1   fully sequenced,   786/786
(100 %)
8 diff
(99.0 %id)
CR991845 T-Lymphocytes .e-u 1 to 489 1 to 489 exact tiling clone,   489/489
(100 %)
0 diff
(100 %id)
BM782883 myeloma .f 1 to 497 1 to 497 exact tiling clone,   497/497
(100 %)
1 diff
(99.8 %id)
AK307210 brain .f 40 to 1091 1 to 1052 exact tiling clone,   1052/1052
(100 %)
1 diff
(100.0 %id)
BU543902 carcinoma, cell line, Prostate .f 41 to 935 1 to 902 exact tiling clone,   902/904
(99 %)
12 diff
(98.7 %id)
BF940041 brain, glioblastoma (pooled) .f 105 to 615 1 to 519     Submitted on the opposite strand 519/519
(100 %)
7 diff
(98.7 %id)
TI_154125948   .g-u 1 to 855 916 to 74   tiling clone, AAA   843/976
(86 %)
20 diff
(98.0 %id)
CN284486 embryonic stem cells, cell lines H1, H7, andH9 .g-u 94 to 815 1 to 721   tiling clone,   721/721
(100 %)
1 diff
(99.9 %id)
CA416237 Chondrosarcoma Cell line .g-u 226 to 855 647 to 19   AAA   629/629
(100 %)
4 diff
(99.4 %id)
BX114080 parathyroid gland, parathyroid tumor .g-u 333 to 888 1 to 556       556/556
(100 %)
0 diff
(100 %id)
AI424961 pooled .g-u 399 to 861 463 to 3       461/463
(99 %)
0 diff
(100 %id)
CV382640 colon .g-u 728 to 1161 451 to 20   tiling clone, Submitted on the opposite strand 432/451
(95 %)
0 diff
(100 %id)
CN283231 embryonic stem cells, cell lines H1, H7, andH9 .g-u 856 to 1530 1 to 676 V7G S8E T9H L12A S13F ... tiling clone,   676/676
(100 %)
3 diff
(99.6 %id)
BF879951 lung_tumor .g-u 877 to 979 1 to 102       102/102
(100 %)
1 diff
(99.1 %id)
DB124839 thymus .h 1 to 484 2 to 485   tiling clone, capped   484/490
(98 %)
3 diff
(99.4 %id)
CX782816 human embryonic stem cells .h 74 to 793 1 to 720 exact tiling clone, Submitted on the opposite strand 720/720
(100 %)
1 diff
(99.9 %id)
BM700191 eye, lens Gene DGCR6L, variant not shown         Suspected internal deletion, this clone was ignored    
DC353818.
matches multiple genes
brain Gene DGCR6L, variant not shown         This clone was ignored, also hits gene storpu    
DC353818.
matches multiple genes
brain Gene storpu, variant not shown         This clone was ignored, also hits gene storpu    
DC426072.
matches multiple genes
brain Gene DGCR6L, variant not shown         This clone was ignored, also hits gene storpu    
DC426072.
matches multiple genes
brain Gene storpu, variant not shown         This clone was ignored, also hits gene storpu    
AA327619   Gene DGCR6L, variant not shown         Suspected internal deletion, this clone was ignored    
W31723 parathyroid gland, parathyroid tumor Gene DGCR6L, variant not shown         This clone was ignored    
W31928 parathyroid gland, parathyroid tumor Gene DGCR6L, variant not shown         This clone was ignored    
AA843405 parathyroid gland, parathyroid tumor Gene DGCR6L, variant not shown         This clone was ignored    
AI004718   Gene DGCR6L, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BF060971 pooled Gene DGCR6L, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
DB144011 thymus Gene DGCR6L, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f, .g-u, .h Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI