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Gene DGCR2andDGCR11TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
614 representative clones for gene DGCR2andDGCR11 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC403434 testis .a 1 to 567 1 to 567   tiling clone,   567/567
(100 %)
0 diff
(100 %id)
NM_005137.2   .a 280 to 4763 1 to 4484 exact RefSeq, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 4484/4484
(100 %)
0 diff
(100 %id)
BC040500 testis .a 285 to 4757 1 to 4473 L517M tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 4473/4473
(100 %)
3 diff
(100.0 %id)
BP212689 cerebrum .a 310 to 886 1 to 577       577/577
(100 %)
0 diff
(100 %id)
DA238949 brain .a 311 to 897 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA240092 brain .a 311 to 887 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA241917 brain .a 311 to 888 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA330145 hippocampus .a 311 to 875 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA339855 hippocampus .a 311 to 896 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
TI_57220959   .a 317 to 1153 60 to 904       845/935
(90 %)
37 diff
(96.1 %id)
AK291670 placenta .a 322 to 2579 1 to 2258 exact     2258/2258
(100 %)
0 diff
(100 %id)
BP279807   .a 322 to 903 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP314724 mammary gland .a 322 to 902 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP321784 Pancreas .a 322 to 901 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BM783344 stomach .a 322 to 893 1 to 572       572/572
(100 %)
0 diff
(100 %id)
BM783439 stomach .a 322 to 893 1 to 572       572/572
(100 %)
0 diff
(100 %id)
BM764432 stomach .a 322 to 948 1 to 627       627/627
(100 %)
0 diff
(100 %id)
DA054062 cerebellum .a 323 to 881 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA099536 cerebellum .a 323 to 884 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA102149 cerebellum .a 323 to 917 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA105266 cerebellum .a 323 to 883 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA105467 cerebellum .a 323 to 894 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA112786 cerebellum .a 323 to 909 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA113854 cerebellum .a 323 to 875 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA119962 cerebellum .a 323 to 875 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA187874 amygdala .a 323 to 880 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA189804 amygdala .a 323 to 895 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA189909 amygdala .a 323 to 897 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA193980 amygdala .a 323 to 910 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA195410 amygdala .a 323 to 891 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA195556 amygdala .a 323 to 885 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA202473 brain .a 323 to 888 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA219505 brain .a 323 to 883 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA219613 brain .a 323 to 891 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA223868 brain .a 323 to 896 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA226784 brain .a 323 to 873 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA233211 brain .a 323 to 903 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA235905 brain .a 323 to 897 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA242795 brain .a 323 to 882 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA253494 caudate nucleus .a 323 to 892 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA312708 hippocampus .a 323 to 891 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA314159 hippocampus .a 323 to 880 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA320979 hippocampus .a 323 to 877 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA327396 hippocampus .a 323 to 890 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA327579 hippocampus .a 323 to 883 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA332365 hippocampus .a 323 to 921 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA336409 hippocampus .a 323 to 894 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA339724 hippocampus .a 323 to 912 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA411186 thalamus .a 323 to 903 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA412310 thalamus .a 323 to 899 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA446265 tongue, tumor tissue .a 323 to 883 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA455831 tongue, tumor tissue .a 323 to 879 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA456022 tongue, tumor tissue .a 323 to 881 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA457506 tongue, tumor tissue .a 323 to 876 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA720354   .a 323 to 899 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA760121   .a 323 to 876 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA782934 brain .a 323 to 888 2 to 580   capped   579/579
(100 %)
7 diff
(98.8 %id)
DA806005 brain .a 323 to 923 2 to 602   capped   601/601
(100 %)
0 diff
(100 %id)
DA854496 placenta .a 323 to 895 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA855177 placenta .a 323 to 921 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA863540 placenta .a 323 to 887 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA958552 Spleen .a 323 to 879 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB067682 testis .a 323 to 902 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BM474257 eye, retinoblastoma .a 324 to 1153 1 to 831       831/979
(84 %)
6 diff
(99.4 %id)
DA192092 amygdala .a 328 to 901 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA225114 brain .a 328 to 879 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA244490 brain .a 328 to 903 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA327503 hippocampus .a 328 to 881 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA339515 hippocampus .a 328 to 907 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
TI_57182215   .a 328 to 1063 61 to 811       751/859
(87 %)
22 diff
(97.5 %id)
DA333982 hippocampus .a 330 to 903 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA400001 thalamus .a 330 to 896 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB155789 thymus .a 330 to 901 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA336704 hippocampus .a 332 to 934 2 to 604   capped   603/603
(100 %)
0 diff
(100 %id)
BC020339 Brain, anaplastic oligodendroglioma with1p/19q loss .a 333 to 3208 1 to 2876 exact tiling clone, available from MGC,   2876/2876
(100 %)
3 diff
(99.9 %id)
BC035425.
matches multiple genes
brain, Brain, glioblastoma with EGFR amplification, glioblastoma with EGFR amplification .a 333 to 3208 1 to 2876   available from MGC, also hits gene HSPB6 2876/2876
(100 %)
3 diff
(99.9 %id)
DA191947 amygdala .a 334 to 903 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA225697 brain .a 334 to 881 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA318000 hippocampus .a 334 to 885 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA397991 thalamus .a 334 to 922 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
TI_57218718   .a 336 to 1037 29 to 752       724/753
(96 %)
25 diff
(96.7 %id)
DA412235 thalamus .a 337 to 912 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
TI_57201022   .a 337 to 971 28 to 661       634/661
(95 %)
6 diff
(99.1 %id)
TI_44459901   .a 337 to 1274 52 to 998       947/1000
(94 %)
25 diff
(97.5 %id)
DA098881 cerebellum .a 338 to 886 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA114110 cerebellum .a 338 to 895 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA244929 brain .a 338 to 908 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA335911 hippocampus .a 338 to 930 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA339277 hippocampus .a 338 to 926 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
BX331479 Neuroblastoma Cot 10-normalized .a 338 to 1329 1 to 986       986/986
(100 %)
16 diff
(98.4 %id)
BX346432 Neuroblastoma Cot 10-normalized .a 338 to 1331 1 to 988       988/988
(100 %)
8 diff
(99.2 %id)
DA095921 cerebellum .a 339 to 895 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA316493 hippocampus .a 339 to 895 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA094894 cerebellum .a 340 to 909 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA101028 cerebellum .a 340 to 938 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA103974 cerebellum .a 340 to 890 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA111276 cerebellum .a 340 to 892 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA112314 cerebellum .a 340 to 919 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA116568 cerebellum .a 340 to 935 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA184576 amygdala .a 340 to 893 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA194606 amygdala .a 340 to 941 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
DA194628 amygdala .a 340 to 896 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA241502 brain .a 340 to 909 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA317362 hippocampus .a 340 to 903 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA327433 hippocampus .a 340 to 895 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA332795 hippocampus .a 340 to 933 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DA402895 thalamus .a 340 to 928 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
TI_57202916   .a 340 to 1077 70 to 809       740/854
(86 %)
13 diff
(98.5 %id)
TI_57240630   .a 340 to 1044 38 to 752       714/752
(94 %)
22 diff
(97.1 %id)
DA098946 cerebellum .a 341 to 891 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA186805 amygdala .a 341 to 897 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA223450 brain .a 341 to 1010 2 to 671   capped   670/670
(100 %)
2 diff
(99.8 %id)
DA509909 brain .a 341 to 903 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA738730   .a 341 to 900 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB281022 uterus .a 341 to 896 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
BX370852 Neuroblastoma Cot 10-normalized .a 343 to 1305 1 to 953       953/953
(100 %)
14 diff
(98.6 %id)
D79985   .a 343 to 4757 1 to 4433 exact available from KIAA,   4433/4436
(99 %)
15 diff
(99.7 %id)
BC032430 Brain, fetal, whole pooled .a 344 to 3200 1 to 2857 exact available from MGC,   2857/2857
(100 %)
1 diff
(100.0 %id)
TI_57217185   .a 344 to 1183 34 to 886       853/887
(96 %)
28 diff
(96.9 %id)
CX163361 human embryonic stem cells differentiated toan early endodermal cell type .a 345 to 1177 1 to 833       833/833
(100 %)
0 diff
(100 %id)
TI_45379117   .a 345 to 1150 37 to 847       811/993
(81 %)
13 diff
(98.7 %id)
BQ068206 brain .a 347 to 1267 1 to 930       930/967
(96 %)
19 diff
(98.1 %id)
DB066131 testis .a 351 to 897 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
CR993044 T-Lymphocytes .a 366 to 1222 1 to 856       856/856
(100 %)
3 diff
(99.7 %id)
TI_57171762   .a 369 to 1077 32 to 742       713/916
(77 %)
16 diff
(98.3 %id)
L77560   .a 379 to 4759 1 to 4398 exact     4398/4399
(99 %)
20 diff
(99.6 %id)
X83545 brain .a 379 to 4759 1 to 4398 exact     4398/4399
(99 %)
20 diff
(99.6 %id)
DA227681 brain .a 398 to 962 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
X84076 brain .a 498 to 4759 117 to 4396 exact     4280/4398
(97 %)
19 diff
(99.6 %id)
CR456433   .a 508 to 2325 1 to 1818 exact     1818/1818
(100 %)
0 diff
(100 %id)
TI_1948137070   .a 521 to 1330 126 to 940       815/1369
(59 %)
41 diff
(97.1 %id)
TI_1948137071   .a 521 to 1436 128 to 1058       931/1313
(70 %)
48 diff
(96.4 %id)
TI_1948137408   .a 521 to 1152 117 to 748       632/1313
(48 %)
13 diff
(99.1 %id)
TI_1948137409   .a 521 to 1407 123 to 1019       897/1297
(69 %)
38 diff
(97.1 %id)
TI_1948137756   .a 521 to 1130 122 to 731       610/1359
(44 %)
24 diff
(98.3 %id)
TI_1948137757   .a 521 to 1322 122 to 924       803/1343
(59 %)
26 diff
(98.1 %id)
TI_1948138105   .a 521 to 1402 121 to 1011       891/1371
(64 %)
40 diff
(97.1 %id)
TI_1948138106   .a 521 to 1333 123 to 935       813/1270
(64 %)
26 diff
(98.0 %id)
TI_1948156305   .a 521 to 1331 125 to 935       811/1108
(73 %)
6 diff
(99.5 %id)
TI_1948156476   .a 521 to 1331 124 to 932       809/1094
(73 %)
9 diff
(99.2 %id)
TI_1948156653   .a 521 to 1407 125 to 1017   fully sequenced,   893/1017
(87 %)
14 diff
(98.7 %id)
TI_1948156830   .a 521 to 1360 128 to 976   fully sequenced,   849/976
(86 %)
6 diff
(99.4 %id)
CU013281 Synthetic constructs .a 522 to 2182 14 to 1674 exact     1661/1684
(98 %)
10 diff
(99.5 %id)
CU012993 Synthetic constructs .a 522 to 2180 14 to 1672 exact     1659/1687
(98 %)
7 diff
(99.6 %id)
EL733816 mixed .a 528 to 1192 1 to 660       660/662
(99 %)
6 diff
(99.1 %id)
BP300973   .a 572 to 1152 1 to 581       581/581
(100 %)
0 diff
(100 %id)
TI_1948156306   .a 1330 to 2179 974 to 127       848/1122
(75 %)
3 diff
(99.8 %id)
TI_1948156477   .a 1330 to 2179 979 to 128       852/1130
(75 %)
3 diff
(99.8 %id)
TI_1948156831   .a 1330 to 2179 977 to 128   fully sequenced,   850/977
(87 %)
3 diff
(99.7 %id)
TI_1948156654   .a 1377 to 2179 931 to 126   fully sequenced,   806/931
(86 %)
0 diff
(100 %id)
TI_44459902   .a 2345 to 3208 929 to 74       856/939
(91 %)
0 diff
(100 %id)
TI_45379118   .a 2377 to 3208 879 to 46       834/881
(94 %)
0 diff
(100 %id)
DB326342 brain .a 4213 to 4757 545 to 1       545/545
(100 %)
0 diff
(100 %id)
BX471926   .a 4298 to 5001 1 to 703   tiling clone,   703/703
(100 %)
3 diff
(99.6 %id)
NM_001184781.1   .b 1 to 4475 1 to 4475 exact RefSeq, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 4475/4475
(100 %)
0 diff
(100 %id)
DA494775 brain .b 2 to 510 2 to 510   tiling clone, capped   509/509
(100 %)
0 diff
(100 %id)
TI_44349202   .b 10 to 719 79 to 805       727/833
(87 %)
44 diff
(94.8 %id)
BG771909 testis .b 18 to 777 1 to 767       767/770
(99 %)
19 diff
(97.6 %id)
BI596809 brain, hypothalamus .b 22 to 751 1 to 729       729/729
(100 %)
14 diff
(98.1 %id)
BI602024 brain, hypothalamus .b 22 to 789 1 to 759       759/769
(98 %)
30 diff
(96.1 %id)
TI_45208794   .b 22 to 751 81 to 810       730/810
(90 %)
15 diff
(98.2 %id)
TI_45210004   .b 22 to 789 121 to 880       760/890
(85 %)
31 diff
(96.6 %id)
BG714733 brain, hypothalamus .b 23 to 778 1 to 745       745/745
(100 %)
21 diff
(97.2 %id)
DA232628 brain .b 24 to 595 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
BP216802 corpus callosum .b 31 to 611 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DA114432 cerebellum .b 32 to 578 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA193157 amygdala .b 32 to 630 2 to 601   capped   600/602
(99 %)
3 diff
(99.6 %id)
DA193995 amygdala .b 32 to 603 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA323417 hippocampus .b 32 to 605 2 to 574   capped   573/573
(100 %)
4 diff
(99.4 %id)
DA721729   .b 32 to 588 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA863125 placenta .b 32 to 688 2 to 659   capped   658/658
(100 %)
1 diff
(99.9 %id)
DA906967   .b 32 to 615 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DB071761 testis .b 32 to 582 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA060512 cerebellum .b 34 to 591 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA126992 cerebellum .b 37 to 619 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
BX452912 neuroblastoma .b 38 to 979 1 to 954       952/954
(99 %)
16 diff
(98.4 %id)
BX464986 neuroblastoma .b 38 to 995 1 to 966       966/966
(100 %)
38 diff
(96.1 %id)
DB095564 testis .b 41 to 594 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA289267 hippocampus .b 42 to 594 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
BP273890   .b 43 to 619 1 to 577       577/577
(100 %)
2 diff
(99.7 %id)
BP311297 brain .b 43 to 625 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP315151 mammary gland .b 43 to 624 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BM787523 stomach .b 43 to 606 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DA065562 cerebellum .b 44 to 605 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA097901 cerebellum .b 44 to 591 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA100131 cerebellum .b 44 to 591 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA112440 cerebellum .b 44 to 608 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA115056 cerebellum .b 44 to 595 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA115776 cerebellum .b 44 to 598 2 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
DA127194 cerebellum .b 44 to 626 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DA128396 cerebellum .b 44 to 615 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA149434 amygdala .b 44 to 608 2 to 569   capped   568/568
(100 %)
7 diff
(98.8 %id)
DA193080 amygdala .b 44 to 614 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
DA196008 amygdala .b 44 to 602 2 to 560   capped   559/559
(100 %)
4 diff
(99.3 %id)
DA226325 brain .b 44 to 692 2 to 650   capped   649/649
(100 %)
0 diff
(100 %id)
DA228367 brain .b 44 to 603 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA236607 brain .b 44 to 608 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA236782 brain .b 44 to 615 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA243870 brain .b 44 to 635 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA245437 brain .b 44 to 615 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA311556 hippocampus .b 44 to 596 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA312611 hippocampus .b 44 to 603 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA317231 hippocampus .b 44 to 595 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA317390 hippocampus .b 44 to 610 2 to 581   capped   580/580
(100 %)
8 diff
(98.7 %id)
DA319660 hippocampus .b 44 to 603 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA321211 hippocampus .b 44 to 611 2 to 568   capped   567/567
(100 %)
5 diff
(99.2 %id)
DA326182 hippocampus .b 44 to 591 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA326547 hippocampus .b 44 to 608 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA327325 hippocampus .b 44 to 594 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA331628 hippocampus .b 44 to 633 2 to 593   capped   592/592
(100 %)
2 diff
(99.7 %id)
DA332281 hippocampus .b 44 to 627 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA335247 hippocampus .b 44 to 615 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA336009 hippocampus .b 44 to 624 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA336475 hippocampus .b 44 to 615 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA337915 hippocampus .b 44 to 618 2 to 577   capped   576/576
(100 %)
4 diff
(99.4 %id)
DA337984 hippocampus .b 44 to 617 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA340403 hippocampus .b 44 to 621 2 to 579   capped   578/578
(100 %)
3 diff
(99.5 %id)
DA455656 tongue, tumor tissue .b 44 to 610 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA501009 brain .b 44 to 601 2 to 561   capped   560/561
(99 %)
4 diff
(99.3 %id)
DA724070   .b 44 to 578 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DA754640   .b 44 to 601 2 to 559   capped   558/558
(100 %)
4 diff
(99.3 %id)
DA755874   .b 44 to 624 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA760046   .b 44 to 587 2 to 545   capped   544/544
(100 %)
3 diff
(99.5 %id)
DA779060 brain .b 44 to 614 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA779078 brain .b 44 to 608 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA793054 brain .b 44 to 659 2 to 628   capped   627/627
(100 %)
9 diff
(98.6 %id)
DA802106 brain .b 44 to 582 2 to 553   capped   552/552
(100 %)
7 diff
(98.8 %id)
DA802762 brain .b 44 to 596 2 to 567   capped   566/566
(100 %)
7 diff
(98.8 %id)
DA804732 brain .b 44 to 593 2 to 564   capped   563/563
(100 %)
7 diff
(98.8 %id)
DA808856 brain .b 44 to 589 2 to 560   capped   559/559
(100 %)
7 diff
(98.8 %id)
DA843560 placenta .b 44 to 622 2 to 580   capped   579/580
(99 %)
1 diff
(99.9 %id)
DB029474 testis .b 44 to 622 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DB037262 testis .b 44 to 606 2 to 577   capped   576/576
(100 %)
7 diff
(98.8 %id)
DB083194 testis .b 44 to 600 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DB083697 testis .b 44 to 588 2 to 546   capped   545/545
(100 %)
3 diff
(99.5 %id)
DB087765 testis .b 44 to 598 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB096893 testis .b 44 to 612 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB148620 thymus .b 44 to 596 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB227333 trachea .b 44 to 616 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB232137 trachea .b 44 to 615 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB284211 uterus .b 44 to 589 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DB284885 uterus .b 44 to 594 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DB291353 uterus .b 44 to 618 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA332264 hippocampus .b 45 to 608 2 to 578   capped   577/577
(100 %)
7 diff
(98.8 %id)
DA312539 hippocampus .b 46 to 581 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
BP248846 Kidney .b 46 to 627 1 to 581       581/582
(99 %)
6 diff
(99.0 %id)
TI_57233587   .b 46 to 773 23 to 749       727/749
(97 %)
8 diff
(99.0 %id)
DA186990 amygdala .b 47 to 611 2 to 566   capped   565/565
(100 %)
3 diff
(99.5 %id)
DA214865 brain .b 47 to 587 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA457992 tongue, tumor tissue .b 47 to 608 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA806373 brain .b 47 to 608 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA192045 amygdala .b 49 to 608 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA312058 hippocampus .b 49 to 600 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA330065 hippocampus .b 49 to 610 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DA333014 hippocampus .b 49 to 622 2 to 575   capped   574/574
(100 %)
3 diff
(99.5 %id)
DA333789 hippocampus .b 49 to 642 2 to 596   capped   595/595
(100 %)
2 diff
(99.7 %id)
DA339151 hippocampus .b 49 to 615 2 to 568   capped   567/567
(100 %)
3 diff
(99.5 %id)
BX331839 Neuroblastoma Cot 25-normalized .b 49 to 988 28 to 962       935/1002
(93 %)
26 diff
(97.5 %id)
BX349408 Neuroblastoma Cot 25-normalized .b 49 to 864 28 to 851       824/851
(96 %)
26 diff
(97.0 %id)
BX386929 Neuroblastoma Cot 25-normalized .b 49 to 1034 28 to 1011       984/1015
(96 %)
16 diff
(98.5 %id)
BX387318 Neuroblastoma Cot 25-normalized .b 49 to 950 28 to 927       900/927
(97 %)
11 diff
(98.9 %id)
DA674951   .b 49 to 628 2 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
DA780042 brain .b 49 to 607 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DB099953 testis .b 49 to 619 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB156041 thymus .b 49 to 628 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DB222479 trachea .b 49 to 637 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA312202 hippocampus .b 51 to 588 2 to 539   capped   538/538
(100 %)
3 diff
(99.5 %id)
DA334122 hippocampus .b 51 to 610 2 to 574   capped   573/573
(100 %)
9 diff
(98.5 %id)
DA336001 hippocampus .b 51 to 624 2 to 576   capped   575/575
(100 %)
4 diff
(99.4 %id)
DA336014 hippocampus .b 51 to 634 2 to 585   capped   584/584
(100 %)
3 diff
(99.5 %id)
DA339127 hippocampus .b 51 to 629 2 to 580   capped   579/579
(100 %)
3 diff
(99.5 %id)
DA851457 placenta .b 51 to 640 2 to 592   capped   591/591
(100 %)
4 diff
(99.4 %id)
DB079094 testis .b 51 to 597 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA190991 amygdala .b 53 to 628 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA336048 hippocampus .b 53 to 640 2 to 590   capped   589/589
(100 %)
2 diff
(99.7 %id)
DA399360 thalamus .b 53 to 609 2 to 559   capped   558/558
(100 %)
5 diff
(99.2 %id)
DA324674 hippocampus .b 55 to 598 2 to 545   capped   544/544
(100 %)
3 diff
(99.5 %id)
DA332759 hippocampus .b 55 to 642 2 to 589   capped   588/588
(100 %)
6 diff
(99.0 %id)
DA387200 thalamus .b 55 to 615 2 to 562   capped   561/561
(100 %)
3 diff
(99.5 %id)
DA410645 thalamus .b 55 to 694 2 to 643   capped   642/642
(100 %)
2 diff
(99.7 %id)
DA863279 placenta .b 55 to 705 2 to 652   capped   651/651
(100 %)
0 diff
(100 %id)
BI907036 leukocyte .b 56 to 773 1 to 717       717/717
(100 %)
6 diff
(99.2 %id)
TI_57170445   .b 58 to 789 45 to 784       740/813
(91 %)
17 diff
(98.0 %id)
DA096891 cerebellum .b 59 to 605 2 to 548   capped   547/548
(99 %)
1 diff
(99.9 %id)
DA105342 cerebellum .b 59 to 637 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA116991 cerebellum .b 59 to 599 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA124003 cerebellum .b 59 to 608 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA311845 hippocampus .b 59 to 598 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA399118 thalamus .b 59 to 624 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA404176 thalamus .b 59 to 608 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
BX460562 brain, fetal brain .b 59 to 922 1 to 874       874/874
(100 %)
13 diff
(98.6 %id)
DA797678 brain .b 59 to 605 2 to 561   capped   560/560
(100 %)
7 diff
(98.8 %id)
DA801045 brain .b 59 to 605 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA191252 amygdala .b 60 to 638 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA334324 hippocampus .b 60 to 630 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
BX349407 Neuroblastoma Cot 25-normalized .b 60 to 962 1 to 898       898/898
(100 %)
6 diff
(99.4 %id)
DB092664 testis .b 60 to 603 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DB141600 thymus .b 60 to 589 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DA113462 cerebellum .b 61 to 607 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA118775 cerebellum .b 61 to 600 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA186746 amygdala .b 61 to 594 2 to 548   capped   547/547
(100 %)
7 diff
(98.8 %id)
DA333488 hippocampus .b 61 to 640 2 to 581   capped   580/580
(100 %)
3 diff
(99.5 %id)
DA337927 hippocampus .b 61 to 630 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA400904 thalamus .b 61 to 614 2 to 568   capped   567/567
(100 %)
7 diff
(98.8 %id)
CN373131 embryonic stem cells, DMSO-treated H9 cellline .b 61 to 712 1 to 652       652/652
(100 %)
4 diff
(99.4 %id)
BX438120 neuroblastoma .b 61 to 1028 18 to 999       982/1008
(97 %)
38 diff
(96.3 %id)
DA460997 tongue, tumor tissue .b 61 to 621 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA462088 tongue, tumor tissue .b 61 to 631 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA674621   .b 61 to 631 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA723518   .b 61 to 629 2 to 570   capped   569/569
(100 %)
3 diff
(99.5 %id)
AU130611   .b 61 to 739 2 to 680   capped   679/679
(100 %)
1 diff
(99.9 %id)
DB043133 testis .b 61 to 617 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB062221 testis .b 61 to 582 2 to 523   capped   522/522
(100 %)
3 diff
(99.5 %id)
DB062912 testis .b 61 to 594 11 to 544   capped   534/534
(100 %)
3 diff
(99.5 %id)
DB063448 testis .b 61 to 609 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DB095849 testis .b 61 to 622 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB101716 thymus .b 61 to 617 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA095327 cerebellum .b 62 to 598 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA108040 cerebellum .b 62 to 627 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA331550 hippocampus .b 62 to 608 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA716758   .b 62 to 606 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
BI825390 brain, medulla .b 63 to 789 1 to 735       735/764
(96 %)
18 diff
(97.7 %id)
BI771026 pooled lung and spleen .b 64 to 895 1 to 834       834/835
(99 %)
10 diff
(98.9 %id)
CA487955   .b 64 to 865 1 to 805       805/864
(93 %)
8 diff
(99.1 %id)
TI_57179688   .b 64 to 895 66 to 899       834/900
(92 %)
13 diff
(98.6 %id)
DA128150 cerebellum .b 65 to 629 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BM919360 pooled pancreas and spleen .b 66 to 1013 19 to 966       948/1061
(89 %)
22 diff
(98.0 %id)
CA488407   .b 66 to 980 1 to 939       939/965
(97 %)
36 diff
(96.3 %id)
BI753918 brain .b 73 to 943 1 to 874       874/944
(92 %)
22 diff
(97.7 %id)
TI_57215609   .b 73 to 943 68 to 941       874/1011
(86 %)
28 diff
(97.3 %id)
TI_154154568   .b 77 to 731 80 to 733       654/656
(99 %)
42 diff
(93.6 %id)
DA118971 cerebellum .b 80 to 615 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA337012 hippocampus .b 80 to 657 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA109960 cerebellum .b 84 to 611 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
DA323944 hippocampus .b 87 to 655 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA399898 thalamus .b 87 to 608 2 to 524   capped   523/523
(100 %)
5 diff
(99.1 %id)
DA804242 brain .b 87 to 631 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
CF137281 lymph .b 122 to 674 1 to 553       553/553
(100 %)
3 diff
(99.5 %id)
TI_154166649   .b 128 to 778 79 to 735       657/813
(80 %)
11 diff
(98.7 %id)
DA805043 brain .b 157 to 667 2 to 512   capped   511/511
(100 %)
0 diff
(100 %id)
BG819657 anaplastic oligodendroglioma with 1p/19qloss, brain .b 220 to 789 1 to 588       588/631
(93 %)
26 diff
(95.9 %id)
BP238045 Liver .b 344 to 941 1 to 598   tiling clone,   598/598
(100 %)
3 diff
(99.5 %id)
DC307854 cerebellum .b 352 to 913 1 to 566       566/566
(100 %)
5 diff
(99.2 %id)
DA103278 cerebellum .b 374 to 909 2 to 539   capped   538/538
(100 %)
2 diff
(99.7 %id)
BX432565 brain, fetal brain .b 548 to 908 539 to 898       360/898
(40 %)
19 diff
(97.9 %id)
DA108099 cerebellum .b 605 to 1167 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BX325472 Neuroblastoma Cot 10-normalized .b 645 to 1534 1 to 871       871/947
(91 %)
36 diff
(96.2 %id)
BX388279 Neuroblastoma Cot 25-normalized .b 649 to 1534 1 to 882       882/939
(93 %)
28 diff
(97.1 %id)
BX368550 Neuroblastoma Cot 25-normalized .b 710 to 1634 1 to 923       923/923
(100 %)
19 diff
(98.0 %id)
DA418875 thalamus .b 803 to 1371 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA804005 brain .b 814 to 1361 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA386529 thalamus .b 815 to 1400 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DB017090 esophageal, tumor tissue .b 901 to 1473 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BX430583 brain, fetal brain .b 906 to 1791 1 to 889   tiling clone,   889/889
(100 %)
15 diff
(98.4 %id)
DB094256 testis .b 908 to 1475 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BX389183 Neuroblastoma Cot 10-normalized .b 936 to 1866 1 to 921       921/921
(100 %)
18 diff
(98.1 %id)
BX389182 Neuroblastoma Cot 10-normalized .b 937 to 1860 1 to 918       918/921
(99 %)
21 diff
(97.8 %id)
DA117492 cerebellum .b 1028 to 1580 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
TI_1948137073   .b 1040 to 1891 986 to 135       852/1335
(63 %)
28 diff
(98.0 %id)
DA125418 cerebellum .b 1042 to 1637 3 to 598   capped   596/597
(99 %)
0 diff
(100 %id)
TI_1948137411   .b 1047 to 1891 963 to 133       831/1291
(64 %)
29 diff
(97.8 %id)
DB239415 trachea .b 1052 to 1628 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA188587 amygdala .b 1054 to 1605 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA208112 brain .b 1063 to 1635 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
TI_1948138108   .b 1071 to 1891 961 to 131       831/1410
(58 %)
25 diff
(98.3 %id)
DA808309 brain .b 1092 to 1677 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA105840 cerebellum .b 1166 to 1725 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
TI_1948137410   .b 1170 to 1891 849 to 126       724/1126
(64 %)
12 diff
(99.0 %id)
TI_1948137072   .b 1173 to 1891 849 to 126       724/1150
(62 %)
5 diff
(99.6 %id)
BU955887 adenocarcinoma, cell line, breast .b 1223 to 1985 1 to 767       767/879
(87 %)
5 diff
(99.5 %id)
BU956691 adenocarcinoma, cell line, breast .b 1223 to 2019 1 to 807       807/880
(91 %)
18 diff
(98.0 %id)
TI_1948137759   .b 1243 to 1891 782 to 130       653/1398
(46 %)
18 diff
(98.8 %id)
TI_1948138107   .b 1245 to 1891 775 to 128       648/1136
(57 %)
5 diff
(99.6 %id)
DN601827 human embryonic stem cells .b 1330 to 1938 1 to 609       609/609
(100 %)
0 diff
(100 %id)
CA776674 Pancreas, Purified pancreatic islet .b 1351 to 1884 56 to 589       534/589
(90 %)
6 diff
(99.0 %id)
BM547303 ovary (pool of 3) .b 1373 to 2368 1 to 1009       1009/1071
(94 %)
28 diff
(97.4 %id)
L46352   .b 1424 to 1710 1 to 287       287/287
(100 %)
1 diff
(99.7 %id)
BI916793 brain .b 1443 to 2208 1 to 766       766/766
(100 %)
1 diff
(99.9 %id)
TI_57239582   .b 1443 to 2208 37 to 802       766/802
(95 %)
7 diff
(99.2 %id)
DA715905   .b 1456 to 2004 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
TI_57181430   .b 1485 to 2359 63 to 942       880/942
(93 %)
22 diff
(97.7 %id)
BI767328 pooled lung and spleen .b 1486 to 2359 1 to 879       879/879
(100 %)
16 diff
(98.2 %id)
DA441018 tongue, tumor tissue .b 1516 to 2065 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA178834 amygdala .b 1520 to 2086 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB097746 testis .b 1546 to 2103 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA517506 brain .b 1553 to 2100 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
BU541695 carcinoma, cell line, Prostate .b 1564 to 2464 1 to 907   tiling clone,   907/908
(99 %)
8 diff
(99.2 %id)
CX781828 human embryonic stem cells .b 1571 to 2298 1 to 728   fully sequenced,   728/728
(100 %)
0 diff
(100 %id)
CA488256   .b 1575 to 2381 1 to 816       816/938
(86 %)
14 diff
(98.6 %id)
CX781314 human embryonic stem cells .b 1581 to 2328 1 to 748   fully sequenced,   748/748
(100 %)
0 diff
(100 %id)
DA134182 alzheimer cortex .b 1648 to 2208 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA876681 Prostate .b 1648 to 2216 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA937786 Spleen .b 1648 to 2222 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BP342533 stomach mucosa .b 1648 to 2227 1 to 580       580/580
(100 %)
0 diff
(100 %id)
TI_57240664   .b 1661 to 2493 33 to 870       838/871
(96 %)
16 diff
(98.2 %id)
BG655907 Pancreas, Purified pancreatic islet .b 1776 to 2337 1 to 562       562/562
(100 %)
0 diff
(100 %id)
TI_154187682   .b 1887 to 2622 854 to 129     Submitted on the opposite strand 726/903
(80 %)
21 diff
(97.7 %id)
CD675168 eye, lens .b 1930 to 2520 1 to 591       591/591
(100 %)
0 diff
(100 %id)
DA451704 tongue, tumor tissue .b 2034 to 2599 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BX432563 brain, fetal brain .b 2071 to 2920 842 to 1       842/842
(100 %)
16 diff
(98.1 %id)
BX367376 Neuroblastoma Cot 25-normalized .b 2079 to 2920 833 to 1       833/921
(90 %)
22 diff
(97.7 %id)
BI712987 Pancreas, Purified pancreatic islet .b 2095 to 2438 1 to 344   fully sequenced,   344/344
(100 %)
0 diff
(100 %id)
BU078211 Pancreas, Purified pancreatic islet .b 2095 to 2513 1 to 419   fully sequenced,   419/419
(100 %)
0 diff
(100 %id)
BJ990751 hepatoblastoma .b 2110 to 2695 1 to 586       586/586
(100 %)
2 diff
(99.7 %id)
DA737844   .b 2110 to 2912 2 to 804   capped   803/807
(99 %)
8 diff
(99.1 %id)
DA301964 hippocampus .b 2112 to 2691 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA037696   .b 2139 to 2686 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DB128820 thymus .b 2140 to 2694 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
CN295788 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 2168 to 2759 1 to 592       592/592
(100 %)
0 diff
(100 %id)
TI_151762209   .b 2177 to 2933 793 to 40       754/1007
(74 %)
0 diff
(100 %id)
BM931002 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2184 to 2820 1 to 637       637/637
(100 %)
0 diff
(100 %id)
BP345507 synovial membrane .b 2229 to 2806 1 to 578       578/578
(100 %)
0 diff
(100 %id)
DB031206 testis .b 2235 to 2833 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
CX781769 human embryonic stem cells .b 2268 to 2912 645 to 1   fully sequenced,   645/645
(100 %)
0 diff
(100 %id)
CX781247 human embryonic stem cells .b 2298 to 2912 615 to 1   fully sequenced,   615/615
(100 %)
0 diff
(100 %id)
BU785106 Pancreas, Purified pancreatic islet .b 2384 to 2857 1 to 474   fully sequenced,   474/474
(100 %)
1 diff
(99.8 %id)
BG324963 Kidney, renal cell adenocarcinoma .b 2385 to 3038 1 to 653   tiling clone,   653/653
(100 %)
1 diff
(99.9 %id)
CA776444 Pancreas, Purified pancreatic islet .b 2388 to 2883 496 to 1       496/496
(100 %)
0 diff
(100 %id)
BI791577 Pancreas, Purified pancreatic islet .b 2408 to 2921 514 to 1   fully sequenced,   514/514
(100 %)
1 diff
(99.9 %id)
BP253264 Kidney .b 2430 to 3012 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA690981   .b 2460 to 3016 2 to 558   capped, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 557/557
(100 %)
0 diff
(100 %id)
AU141868 thyroid gland .b 2461 to 3169 2 to 710   capped   709/713
(99 %)
4 diff
(99.5 %id)
BU077964 Pancreas, Purified pancreatic islet .b 2483 to 2885 403 to 1   fully sequenced,   403/403
(100 %)
0 diff
(100 %id)
TI_44171564   .b 2554 to 3290 92 to 824       733/825
(88 %)
16 diff
(98.1 %id)
BU784856 Pancreas, Purified pancreatic islet .b 2637 to 2883 247 to 1   fully sequenced,   247/247
(100 %)
0 diff
(100 %id)
BP252367 Kidney .b 2762 to 3342 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BI161154 epithelioid carcinoma cell line, Pancreas .b 2834 to 3669 1 to 834       834/836
(99 %)
17 diff
(98.0 %id)
BP381773 adipose tissue .b 2863 to 3476 1 to 614       614/614
(100 %)
0 diff
(100 %id)
DA067745 cerebellum .b 2884 to 3445 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
TI_154135839   .b 2913 to 3614 51 to 763     Submitted on the opposite strand 713/766
(93 %)
62 diff
(92.0 %id)
TI_157610357   .b 2913 to 3454 60 to 601     Submitted on the opposite strand 542/602
(90 %)
1 diff
(99.9 %id)
CA776441 Pancreas, Purified pancreatic islet .b 2950 to 3545 1 to 596     Submitted on the opposite strand 596/596
(100 %)
0 diff
(100 %id)
TI_57146394   .b 2974 to 3893 63 to 983       921/983
(93 %)
6 diff
(99.4 %id)
DA363631 subthalamic nucleus .b 3018 to 3596 2 to 580   tiling clone, capped   579/579
(100 %)
0 diff
(100 %id)
TI_59390698   .b 3101 to 3841 92 to 831       740/740
(100 %)
4 diff
(99.5 %id)
BM910534 astrocytoma grade IV, cell line, brain .b 3102 to 3977 1 to 886       886/1026
(86 %)
22 diff
(97.9 %id)
BP253486 Kidney .b 3112 to 3693 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BG742137 skin .b 3344 to 4198 1 to 857       857/859
(99 %)
11 diff
(98.8 %id)
CB054551 brain, glioblastoma (pooled) .b 3354 to 3895 1 to 541   fully sequenced, Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 541/541
(100 %)
7 diff
(98.8 %id)
TI_57242826   .b 3377 to 4256 36 to 914       879/914
(96 %)
6 diff
(99.4 %id)
BI914197 brain .b 3378 to 4256 1 to 878       878/878
(100 %)
19 diff
(97.9 %id)
BF347424 anaplastic oligodendroglioma with 1p/19qloss, brain .b 3382 to 4163 1 to 797       797/799
(99 %)
32 diff
(96.0 %id)
BM699685 eye, lens .b 3432 to 3874 1 to 444   fully sequenced, Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 444/444
(100 %)
2 diff
(99.6 %id)
BG288148 bladder, transitional cell papilloma, cell line .b 3449 to 4271 1 to 823       823/823
(100 %)
62 diff
(92.5 %id)
BG769105 melanotic melanoma, high MDR (cell line), skin .b 3463 to 4362 1 to 893       893/974
(91 %)
26 diff
(97.4 %id)
BQ673704 epidermoid carcinoma, cell line, salivary gland .b 3532 to 4399 10 to 892       883/952
(92 %)
29 diff
(97.0 %id)
BQ675694 epidermoid carcinoma, cell line, salivary gland .b 3533 to 4327 1 to 802       802/833
(96 %)
13 diff
(98.5 %id)
BQ893464 epidermoid carcinoma, cell line, salivary gland .b 3533 to 4399 1 to 886   tiling clone,   886/889
(99 %)
29 diff
(96.8 %id)
CU455123 epidermis .b 3543 to 4141 601 to 3     Submitted on the opposite strand 599/601
(99 %)
0 diff
(100 %id)
BM694500 eye, RPE and Choroid .b 3566 to 3915 1 to 350   fully sequenced, Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 350/350
(100 %)
0 diff
(100 %id)
TI_151723764   .b 3568 to 4469 966 to 85   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 882/917
(96 %)
25 diff
(97.3 %id)
TI_149315366   .b 3583 to 4468 961 to 88   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 874/971
(90 %)
23 diff
(97.7 %id)
TI_149274918   .b 3613 to 4469 929 to 80   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 850/1009
(84 %)
18 diff
(98.3 %id)
TI_149292440   .b 3621 to 4469 931 to 85   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 847/947
(89 %)
31 diff
(96.8 %id)
BM695527 eye, optic nerve .b 3629 to 4050 1 to 422   fully sequenced, Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 422/422
(100 %)
0 diff
(100 %id)
DR762924 embryonic stem .b 3634 to 4469 859 to 24   AAA Submitted on the opposite strand 836/836
(100 %)
0 diff
(100 %id)
TI_149286054   .b 3645 to 4469 904 to 84   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 821/822
(99 %)
13 diff
(98.5 %id)
CD619922   .b 3652 to 4222 1 to 571       571/572
(99 %)
6 diff
(99.0 %id)
CD619923   .b 3659 to 4302 661 to 17       645/668
(96 %)
0 diff
(100 %id)
TI_154101436   .b 3686 to 4469 863 to 89   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 775/781
(99 %)
19 diff
(97.6 %id)
CA776671 Pancreas, Purified pancreatic islet .b 3703 to 4332 640 to 11     Submitted on the opposite strand 630/640
(98 %)
0 diff
(100 %id)
CR618211 Neuroblastoma Cot 10-normalized .b 3704 to 4471 1 to 768       768/768
(100 %)
0 diff
(100 %id)
BX331291 Neuroblastoma Cot 10-normalized .b 3704 to 4471 1 to 768       768/768
(100 %)
0 diff
(100 %id)
TI_149273527   .b 3708 to 4468 849 to 88   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 762/1031
(73 %)
7 diff
(99.4 %id)
CV809766 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 3720 to 4469 773 to 23   AAA Submitted on the opposite strand 751/754
(99 %)
33 diff
(95.7 %id)
BI712801 Pancreas, Purified pancreatic islet .b 3724 to 4317 1 to 594       594/594
(100 %)
2 diff
(99.7 %id)
CA421567 Bone, Enchondroma cell line .b 3724 to 4469 763 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 745/754
(98 %)
5 diff
(99.4 %id)
CV800389 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 3725 to 4470 737 to 1     Submitted on the opposite strand 737/864
(85 %)
11 diff
(98.8 %id)
BM792593 Ascites, stomach .b 3725 to 4244 1 to 520       520/520
(100 %)
2 diff
(99.7 %id)
CX761478 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 3733 to 4469 760 to 31   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 730/821
(88 %)
11 diff
(98.7 %id)
BQ045263 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 3738 to 4468 749 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 731/731
(100 %)
3 diff
(99.6 %id)
BU181947 eye, retinoblastoma .b 3739 to 4469 1 to 731   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 731/731
(100 %)
0 diff
(100 %id)
CX757045 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 3760 to 4477 736 to 25     Submitted on the opposite strand 712/851
(83 %)
0 diff
(100 %id)
TI_149290023   .b 3768 to 4469 774 to 79   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 696/699
(99 %)
9 diff
(98.8 %id)
CK820925 Pancreas, Purified pancreatic islet .b 3778 to 4258 1 to 481     Submitted on the opposite strand 481/481
(100 %)
0 diff
(100 %id)
CV814361 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 3785 to 4469 708 to 24   AAA Submitted on the opposite strand 685/685
(100 %)
4 diff
(99.5 %id)
DR760828 embryonic stem .b 3795 to 4469 701 to 27   AAA Submitted on the opposite strand 675/675
(100 %)
2 diff
(99.8 %id)
BM998754 lung, Metastatic Chondrosarcoma .b 3800 to 4469 685 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 667/667
(100 %)
3 diff
(99.6 %id)
BM993897 Bone, Subchondral Bone .b 3815 to 4469 673 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 655/655
(100 %)
2 diff
(99.7 %id)
CN479432 Bone, Subchondral Bone .b 3815 to 4469 673 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 655/655
(100 %)
2 diff
(99.7 %id)
BU737506 eye, lens .b 3844 to 4469 644 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 626/626
(100 %)
0 diff
(100 %id)
DA331212 hippocampus .b 3860 to 4441 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
CB054550 brain, glioblastoma (pooled) .b 3865 to 4469 630 to 26   fully sequenced, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 605/605
(100 %)
0 diff
(100 %id)
CK820926 Pancreas, Purified pancreatic islet .b 3868 to 4469 618 to 17   AAA Submitted on the opposite strand 602/602
(100 %)
0 diff
(100 %id)
BQ448311 Knee, Osteoarthritic Cartilage .b 3879 to 4469 609 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 591/591
(100 %)
0 diff
(100 %id)
BU680902 lung .b 3882 to 4469 607 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 589/589
(100 %)
1 diff
(99.9 %id)
BU676405 lung, Primary Lung Epithelial Cells .b 3883 to 4469 605 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 587/587
(100 %)
0 diff
(100 %id)
BM973157 lung .b 3883 to 4469 602 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 584/584
(100 %)
4 diff
(99.4 %id)
CD742903 Alveolar Macrophage, lung .b 3883 to 4469 605 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 587/587
(100 %)
0 diff
(100 %id)
BQ008543 Chondrosarcoma, Left Pubic Bone .b 3884 to 4468 603 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 585/585
(100 %)
1 diff
(99.9 %id)
BU675879 lung, Primary Lung Epithelial Cells .b 3884 to 4468 604 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 586/586
(100 %)
1 diff
(99.9 %id)
CA445085 lung, Metastatic Chondrosarcoma .b 3884 to 4469 603 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 585/590
(99 %)
1 diff
(99.9 %id)
CA441896 Chondrosarcoma, Left Pubic Bone .b 3884 to 4469 604 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 586/586
(100 %)
0 diff
(100 %id)
BM803076 duodenal adenocarcinoma, cell line, small intestine .b 3885 to 4477 1 to 593       593/1151
(51 %)
4 diff
(99.7 %id)
BU731115 eye, RPE and Choroid .b 3885 to 4469 603 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 585/585
(100 %)
0 diff
(100 %id)
BU682393 lung .b 3887 to 4469 602 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 584/584
(100 %)
3 diff
(99.5 %id)
BQ772842 Chondrosarcoma Cell line .b 3890 to 4469 598 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 580/580
(100 %)
1 diff
(99.9 %id)
CD672486 eye, Iris .b 3905 to 4214 1 to 328   fully sequenced, Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 328/328
(100 %)
6 diff
(98.2 %id)
BJ990752 hepatoblastoma .b 3914 to 4453 540 to 1       540/540
(100 %)
0 diff
(100 %id)
BF726296 eye, lens .b 3924 to 4441 1 to 518       518/518
(100 %)
0 diff
(100 %id)
BF970242 adrenal cortex carcinoma, cell line, adrenal gland .b 3927 to 4469 1 to 541   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 541/541
(100 %)
2 diff
(99.7 %id)
DB370464   .b 3931 to 4469 539 to 1       539/542
(99 %)
2 diff
(99.7 %id)
CA434381 lung, Metastatic Chondrosarcoma .b 3942 to 4469 564 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 546/554
(98 %)
6 diff
(99.0 %id)
BQ021157 lung, Metastatic Chondrosarcoma .b 3944 to 4469 559 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 541/550
(98 %)
6 diff
(99.0 %id)
BI438309 Pancreas, Purified pancreatic islet .b 3950 to 4469 536 to 17   AAA Submitted on the opposite strand 520/520
(100 %)
1 diff
(99.9 %id)
AA594844 normal prostate, Prostate .b 3958 to 4469 510 to 1       510/510
(100 %)
3 diff
(99.5 %id)
AW001276 colon, colonic mucosa from 3 patients with Crohn'sdisease .b 3961 to 4470 511 to 1       511/511
(100 %)
2 diff
(99.7 %id)
AU152530   .b 3968 to 4469 500 to 1       500/545
(91 %)
4 diff
(99.3 %id)
BQ778630 Pancreas, Purified pancreatic islet .b 3982 to 4469 504 to 16   AAA Submitted on the opposite strand 489/489
(100 %)
6 diff
(98.8 %id)
BM145061 leukopheresis .b 3991 to 4471 495 to 14       482/496
(97 %)
0 diff
(100 %id)
DR762812 embryonic stem .b 3993 to 4471 506 to 28   AAA Submitted on the opposite strand 479/486
(98 %)
0 diff
(100 %id)
TI_154167593   .b 3993 to 4471 565 to 87     Submitted on the opposite strand 479/486
(98 %)
0 diff
(100 %id)
CR740894   .b 3996 to 4469 484 to 11   AAA Submitted on the opposite strand 474/474
(100 %)
0 diff
(100 %id)
CA442056 lung, Lung Focal Fibrosis .b 3998 to 4469 508 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 490/490
(100 %)
7 diff
(98.6 %id)
AI139281 uterus .b 4003 to 4469 467 to 1       467/467
(100 %)
0 diff
(100 %id)
CA947036 Pancreas, Purified pancreatic islet .b 4003 to 4469 488 to 22   AAA Submitted on the opposite strand 467/467
(100 %)
0 diff
(100 %id)
AI147874 uterus .b 4007 to 4471 466 to 3       464/466
(99 %)
0 diff
(100 %id)
AI150658 heart .b 4013 to 4471 463 to 5       459/463
(99 %)
0 diff
(100 %id)
BU728940 eye, optic nerve .b 4020 to 4469 468 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 450/450
(100 %)
0 diff
(100 %id)
AW117819 esophagus, squamous cell carcinoma .b 4044 to 4474 433 to 2       432/433
(99 %)
0 diff
(100 %id)
CB306308 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 4046 to 4469 442 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 424/424
(100 %)
3 diff
(99.3 %id)
AA705247 liver and spleen .b 4061 to 4471 413 to 3       411/413
(99 %)
0 diff
(100 %id)
AW502246 lymph .b 4065 to 4475 454 to 44   tiling clone, AAA Submitted on the opposite strand 411/411
(100 %)
4 diff
(99.1 %id)
T33049 brain .b 4076 to 4469 412 to 19   AAA Submitted on the opposite strand 394/394
(100 %)
0 diff
(100 %id)
AI357988 Kidney, renal cell tumor .b 4087 to 4470 384 to 1       384/384
(100 %)
0 diff
(100 %id)
AI174625   .b 4089 to 4469 399 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 381/381
(100 %)
0 diff
(100 %id)
BP420183 small intestine .b 4091 to 4471 1 to 381     Submitted on the opposite strand 381/383
(99 %)
3 diff
(99.3 %id)
AA677415 liver and spleen .b 4098 to 4469 372 to 1       372/372
(100 %)
0 diff
(100 %id)
BM729075 eye, fetal eye .b 4125 to 4469 1 to 345   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 345/345
(100 %)
0 diff
(100 %id)
AA037429 uterus .b 4149 to 4469 321 to 1       321/321
(100 %)
0 diff
(100 %id)
AW054699 colon .b 4159 to 4471 316 to 4       313/316
(99 %)
0 diff
(100 %id)
BE694679 breast .b 4164 to 4417 252 to 1       252/252
(100 %)
2 diff
(99.3 %id)
D54770   .b 4165 to 4452 1 to 288       288/289
(99 %)
1 diff
(99.7 %id)
AW081086 colon, moderately differentiated adenocarcinoma .b 4165 to 4469 305 to 1       305/305
(100 %)
0 diff
(100 %id)
BI770986 pooled lung and spleen .b 4169 to 4469 1 to 301   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 301/301
(100 %)
2 diff
(99.4 %id)
AA807049 germinal center B cell .b 4171 to 4469 310 to 11   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 300/300
(100 %)
1 diff
(99.7 %id)
BQ185735 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 4173 to 4469 1 to 297   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 297/297
(100 %)
0 diff
(100 %id)
CD672485 eye, Iris .b 4184 to 4469 309 to 24   fully sequenced, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 286/286
(100 %)
1 diff
(99.7 %id)
T33781 brain .b 4220 to 4469 250 to 1       250/250
(100 %)
1 diff
(99.6 %id)
T06617   .b 4255 to 4471 219 to 3       217/219
(99 %)
0 diff
(100 %id)
BM788900 stomach .b 4263 to 4469 1 to 207   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 207/207
(100 %)
0 diff
(100 %id)
AI004143   .b 4268 to 4471 205 to 2       204/205
(99 %)
0 diff
(100 %id)
NM_001173533.1   .c 1 to 4361 1 to 4361 exact RefSeq, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 4361/4361
(100 %)
0 diff
(100 %id)
BP228644 brain .c 31 to 612 1 to 582   tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
AK304382 trachea .c 43 to 2042 1 to 2000 exact tiling clone,   2000/2000
(100 %)
0 diff
(100 %id)
DC300407   .c 43 to 501 1 to 459       459/459
(100 %)
3 diff
(99.4 %id)
DC317673 amygdala .c 43 to 591 1 to 549       549/549
(100 %)
0 diff
(100 %id)
DC320458 brain .c 43 to 501 1 to 459       459/459
(100 %)
0 diff
(100 %id)
DC323750 brain .c 43 to 591 1 to 549       549/549
(100 %)
0 diff
(100 %id)
DC418505 trachea .c 43 to 596 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DC374552 brain .c 46 to 592 1 to 547       547/547
(100 %)
0 diff
(100 %id)
DC309650 cerebellum .c 58 to 616 1 to 559       559/559
(100 %)
0 diff
(100 %id)
BP209463 cerebellum .c 61 to 640 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DC424375   .c 61 to 715 1 to 654       654/656
(99 %)
6 diff
(99.1 %id)
BI821941 pooled brain, lung, testis .c 70 to 819 1 to 746       746/747
(99 %)
11 diff
(98.6 %id)
TI_57201684   .c 70 to 819 30 to 775       746/776
(96 %)
13 diff
(98.4 %id)
DA448962 tongue, tumor tissue .c 418 to 976 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA755627   .c 437 to 999 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA861330 placenta .c 455 to 1027 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
AU152447   .c 3817 to 4354 537 to 1   tiling clone,   537/543
(98 %)
11 diff
(98.0 %id)
NM_001173534.1   .d 1 to 4352 1 to 4352 exact RefSeq, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 4352/4352
(100 %)
0 diff
(100 %id)
DC332561 hippocampus .d 42 to 582 1 to 541       541/541
(100 %)
4 diff
(99.3 %id)
DC334844 hippocampus .d 42 to 593 15 to 566   tiling clone,   552/552
(100 %)
1 diff
(99.9 %id)
AK296337 thalamus .d 43 to 1832 1 to 1790 P23S tiling clone,   1790/1790
(100 %)
2 diff
(99.9 %id)
DC307515 cerebellum .d 43 to 607 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC323443 brain .d 43 to 621 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DC323658 brain .d 43 to 610 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC342420 thalamus .d 43 to 582 1 to 540       540/540
(100 %)
1 diff
(99.9 %id)
BM817680 stomach .d 43 to 392 1 to 350       350/350
(100 %)
0 diff
(100 %id)
CN295787 embryonic stem cells, DMSO-treated H9 cellline .e -9 to 741 1 to 750   tiling clone,   750/750
(100 %)
6 diff
(99.2 %id)
DB218171 trachea .e 240 to 756 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
AA352689   .e 573 to 856 3 to 287       285/287
(99 %)
6 diff
(98.0 %id)
BU171728 melanotic melanoma, skin .e 586 to 1364 12 to 795   tiling clone,   784/831
(94 %)
16 diff
(98.1 %id)
AK098432 thyroid .e 760 to 2973 1 to 2214   tiling clone, available from FLJ,   2214/2214
(100 %)
0 diff
(100 %id)
NR_024157.1   .e 760 to 2973 1 to 2214   RefSeq,   2214/2214
(100 %)
0 diff
(100 %id)
CF132056 Chondrosarcoma Lung Metastasis cell lines, lung .e 960 to 1632 1 to 673       673/673
(100 %)
4 diff
(99.5 %id)
TI_159677784   .e 960 to 1892 51 to 978       928/1056
(87 %)
18 diff
(98.3 %id)
CD358844 testis .e 1122 to 1845 12 to 747       736/983
(74 %)
34 diff
(96.6 %id)
BF038565 adenocarcinoma, ovary .e 1133 to 1734 1 to 602       602/603
(99 %)
7 diff
(98.9 %id)
CV397550 ovary .e 1187 to 1524 339 to 3     Submitted on the opposite strand 337/348
(96 %)
0 diff
(100 %id)
BX350514   .e 1290 to 2207 925 to 1       925/925
(100 %)
33 diff
(96.5 %id)
BU584343   .e 1497 to 1915 1 to 419       419/419
(100 %)
3 diff
(99.3 %id)
Z45514 brain, total brain .e 1738 to 2066 1 to 329       329/329
(100 %)
2 diff
(99.4 %id)
BX368527   .e 1838 to 2207 371 to 1       371/538
(68 %)
14 diff
(97.4 %id)
CR607605 Neuroblastoma Cot 25-normalized .e 1869 to 2965 1 to 1097       1097/1097
(100 %)
0 diff
(100 %id)
AL524428 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .e 1869 to 2415 1 to 547   fully sequenced,   547/547
(100 %)
2 diff
(99.7 %id)
H55879 liver and spleen .e 1939 to 2331 1 to 401       401/406
(98 %)
14 diff
(96.6 %id)
AA011514 liver and spleen .e 1939 to 2440 1 to 505   fully sequenced,   505/505
(100 %)
5 diff
(99.1 %id)
BX103800 liver and spleen .e 1940 to 2572 1 to 632       632/632
(100 %)
3 diff
(99.6 %id)
BX341991   .e 2060 to 2910 850 to 1       850/850
(100 %)
9 diff
(99.0 %id)
AA702256 liver and spleen .e 2373 to 2863 491 to 1       491/491
(100 %)
2 diff
(99.6 %id)
H55785 liver and spleen .e 2383 to 2865 486 to 2       485/488
(99 %)
0 diff
(100 %id)
AL524427 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .e 2385 to 2965 579 to 1   fully sequenced,   579/579
(100 %)
33 diff
(94.4 %id)
AA011681 liver and spleen .e 2410 to 2865 455 to 1   fully sequenced,   455/455
(100 %)
1 diff
(99.8 %id)
DW416689 Liver .e 2430 to 2721 17 to 308       292/308
(94 %)
6 diff
(98.1 %id)
DW434169 Liver .e 2430 to 2669 21 to 260       240/260
(92 %)
6 diff
(97.7 %id)
BF592943 pooled germ cell tumors .e 2490 to 2863 374 to 1       374/382
(97 %)
3 diff
(99.3 %id)
AI004308 breast .e 2508 to 2972 464 to 1       464/464
(100 %)
3 diff
(99.4 %id)
AW237215 pooled germ cell tumors .e 2523 to 2863 341 to 1       341/341
(100 %)
1 diff
(99.8 %id)
AW237231 pooled germ cell tumors .e 2523 to 2863 340 to 1       340/340
(100 %)
2 diff
(99.5 %id)
AI287561 placenta .e 2579 to 2974 402 to 7       396/402
(98 %)
0 diff
(100 %id)
F04376 brain, total brain .e 2677 to 2973 296 to 1       296/296
(100 %)
2 diff
(99.4 %id)
DB302184 amygdala .e 2773 to 3321 1 to 549   tiling clone, Submitted on the opposite strand 549/555
(98 %)
4 diff
(99.3 %id)
DB028967 testis .f 1 to 360 2 to 361   tiling clone, capped   360/360
(100 %)
0 diff
(100 %id)
BP371598 testis .f 26 to 605 1 to 581   tiling clone,   581/581
(100 %)
3 diff
(99.5 %id)
CN373137 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .f 529 to 1173 1 to 646   tiling clone,   646/646
(100 %)
1 diff
(99.9 %id)
BE531182 adenocarcinoma, Pancreas .g 1 to 867 1 to 873 G15R R17Q D216* tiling clone,   873/946
(92 %)
36 diff
(96.2 %id)
BE616395 adenocarcinoma, Pancreas .g 8 to 780 1 to 771 R72L P74G W76S Q77G T78R ... tiling clone,   771/833
(92 %)
22 diff
(97.4 %id)
BE616549 adenocarcinoma, Pancreas .g 12 to 741 1 to 730 C7M V8C W9V L10A L11A ... tiling clone,   730/1043
(69 %)
32 diff
(97.0 %id)
BE616375 adenocarcinoma, Pancreas .g 14 to 780 12 to 771 L5A R6E V8M A18L A19P ... tiling clone,   760/983
(77 %)
21 diff
(97.9 %id)
BG104199 melanotic melanoma, skin .h-u 1 to 840 1 to 837 A145S Y146L L147P S149L R150A ... tiling clone,   837/838
(99 %)
27 diff
(96.8 %id)
BF508155   .h-u 692 to 1143 469 to 18   tiling clone, AAA   452/452
(100 %)
6 diff
(98.7 %id)
DC422763 uterus .i 1 to 524 1 to 524   tiling clone,   524/524
(100 %)
0 diff
(100 %id)
DC332467 hippocampus .i 118 to 576 1 to 459       459/459
(100 %)
0 diff
(100 %id)
CR602533 B cells (Ramos cell line) Cot 25-normalized .i 441 to 2899 1 to 2459   tiling clone,   2459/2459
(100 %)
0 diff
(100 %id)
BU616350 Bone, Subchondral Bone .j 1 to 551 570 to 19 R10X T11N V12C C13V A14C ... tiling clone, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 552/552
(100 %)
1 diff
(99.9 %id)
TI_151731088   .k 1 to 510 45 to 553 H2R R3K L6Y L7W A8L ...   Submitted on the opposite strand 509/1003
(50 %)
7 diff
(99.4 %id)
BQ186195 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .k 9 to 510 502 to 1   tiling clone, Submitted on the opposite strand 502/502
(100 %)
0 diff
(100 %id)
DB221796 trachea .l 1 to 509 2 to 511 exact tiling clone, capped   510/510
(100 %)
5 diff
(99.1 %id)
TI_149290265   .m-u 1 to 816 897 to 72 A3S H4R L5A G6E R7W ... tiling clone, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 819/820
(99 %)
12 diff
(98.6 %id)
TI_149299499   .m-u 7 to 816 884 to 91 exact tiling clone, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 794/949
(83 %)
16 diff
(98.4 %id)
BM975741 lung, Primary Lung Cystic Fibrosis EpithelialCells .m-u 89 to 816 738 to 14 exact tiling clone, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 725/725
(100 %)
5 diff
(99.4 %id)
BM973365 lung .m-u 156 to 816 675 to 14   tiling clone, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 662/662
(100 %)
1 diff
(99.9 %id)
AA769635 2 pooled tumors (clear cell type), Kidney .m-u 427 to 833 411 to 5       407/411
(99 %)
0 diff
(100 %id)
DA852653 placenta .m-u 735 to 1281 2 to 548   tiling clone, capped   547/547
(100 %)
0 diff
(100 %id)
DA099034 cerebellum .m-u 885 to 1438 2 to 555   tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
TI_57231668   .m-u 1065 to 1629 26 to 595       570/596
(95 %)
8 diff
(98.7 %id)
BI906168 leukocyte .m-u 1066 to 1629 1 to 569       569/570
(99 %)
8 diff
(98.6 %id)
DB095058 testis .m-u 1306 to 1892 2 to 588   tiling clone, capped   587/587
(100 %)
0 diff
(100 %id)
DA942116 Spleen .n 1 to 550 2 to 565 L10P L23P L39P S43P R45G ... tiling clone, capped   564/564
(100 %)
10 diff
(98.3 %id)
BC073822 Pancreas, ductal carcinoma .n 429 to 2078 1 to 1650   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 1650/1650
(100 %)
4 diff
(99.8 %id)
BQ687606 ductal carcinoma, cell line, Pancreas .n 430 to 1217 1 to 794       794/981
(80 %)
9 diff
(99.1 %id)
BQ685757 ductal carcinoma, cell line, Pancreas .n 430 to 1112 1 to 685       685/973
(70 %)
20 diff
(98.0 %id)
BU168892 ductal carcinoma, cell line, Pancreas .n 431 to 1041 1 to 611   available from MGC,   611/912
(66 %)
8 diff
(99.2 %id)
AA324245 brain, cerebellum .n 658 to 1007 1 to 351       351/351
(100 %)
1 diff
(99.8 %id)
BI018406 marrow .n 1047 to 1422 377 to 2       376/377
(99 %)
0 diff
(100 %id)
DB086696 testis .o 1 to 564 2 to 566   tiling clone, capped   565/565
(100 %)
2 diff
(99.7 %id)
AV694893 hepatocellular carcinoma .o 335 to 763 1 to 424   tiling clone,   424/426
(99 %)
3 diff
(99.3 %id)
AI571755 anaplastic oligodendroglioma, brain .p 1 to 476 487 to 10 exact tiling clone,   478/487
(98 %)
0 diff
(100 %id)
NR_033674.1   Gene DGCR2andDGCR11, variant not shown       RefSeq, AAA This clone was ignored    
68 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j, .k, .l, .m-u, .n, .o, .p Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI