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Gene DEPDC4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
22 supporting clones for gene DEPDC4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA147507 amygdala .a 1 to 572 2 to 573   tiling clone, capped   572/572
(100 %)
1 diff
(99.9 %id)
DB301546 amygdala .a 1272 to 1800 529 to 1   tiling clone,   529/529
(100 %)
21 diff
(96.1 %id)
BC100930 PCR rescued clones .b 1 to 1164 2 to 1165 H122R tiling clone,   1165/1165
(100 %)
1 diff
(100.0 %id)
BC100928 PCR rescued clones .c 1 to 1002 2 to 1003 exact tiling clone,   1003/1003
(100 %)
0 diff
(100 %id)
NM_152317.2   .d 1 to 1154 2 to 1155 exact RefSeq,   1155/1155
(100 %)
0 diff
(100 %id)
BU159854 eye, retinoblastoma .d 22 to 773 1 to 793   tiling clone,   751/948
(79 %)
61 diff
(93.6 %id)
BX117611 pooled .d 98 to 825 1 to 729       729/731
(99 %)
2 diff
(99.8 %id)
BC015117 Bladder, carcinoma .d 100 to 1151 1 to 1051   tiling clone, available from MGC, AAA   1051/1051
(100 %)
4 diff
(99.7 %id)
AA904979 pooled .d 803 to 1139 356 to 21   AAA   336/336
(100 %)
1 diff
(99.8 %id)
AA884949 pooled .d 829 to 1139 330 to 21   tiling clone, AAA   310/310
(100 %)
1 diff
(99.7 %id)
BI023188 marrow .d 837 to 1151 1 to 313   tiling clone, AAA   313/313
(100 %)
12 diff
(96.2 %id)
BE567803 bladder, carcinoma, cell line .e 1 to 651 1 to 648   tiling clone,   648/834
(77 %)
19 diff
(97.8 %id)
BE568386 bladder, carcinoma, cell line .e 74 to 637 1 to 562   tiling clone, available from MGC,   562/820
(68 %)
14 diff
(98.3 %id)
CN414247 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 561 to 949 1 to 389   tiling clone,   389/389
(100 %)
1 diff
(99.8 %id)
BM464393 leiomyosarcoma, uterus .f 1 to 965 26 to 992 A2V T234H L235Y L236Y C237V ... available from MGC,   967/1107
(87 %)
24 diff
(97.9 %id)
BC039480 Uterus, leiomyosarcoma .f 4 to 1034 1 to 1031   tiling clone, available from MGC, AAA   1031/1031
(100 %)
0 diff
(100 %id)
BC100927 PCR rescued clones .g 1 to 767 2 to 768 exact tiling clone,   768/768
(100 %)
0 diff
(100 %id)
BC100929 PCR rescued clones .h 1 to 540 2 to 541 exact tiling clone,   541/541
(100 %)
0 diff
(100 %id)
AI174472   .i 1 to 316 320 to 5 exact tiling clone,   321/325
(98 %)
0 diff
(100 %id)
AW242421 Kidney .j 1 to 501 501 to 1 exact tiling clone,   501/501
(100 %)
0 diff
(100 %id)
AI273313 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .k-u 1 to 417 419 to 1 exact tiling clone,   419/419
(100 %)
1 diff
(99.8 %id)
AK090824 amygdala Gene DEPDC4, variant not shown       available from FLJ, This clone was ignored    
AX746635   Gene DEPDC4, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C