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Gene DDX3YTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
451 supporting clones for gene DDX3Y back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC394594 testis .a 1 to 574 1 to 574   tiling clone,   574/574
(100 %)
0 diff
(100 %id)
DC417129 trachea .a 1 to 573 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
DC318821 brain .a 3 to 566 1 to 564       564/564
(100 %)
0 diff
(100 %id)
BP228382   .a 3 to 583 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
NM_004660.3   .a 3 to 4490 1 to 4488 exact RefSeq,   4488/4488
(100 %)
0 diff
(100 %id)
DC317660 amygdala .a 6 to 555 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DC414779 trachea .a 6 to 587 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC334528 hippocampus .a 18 to 518 1 to 503       501/503
(99 %)
2 diff
(99.7 %id)
DC409563 thymus .a 18 to 576 1 to 559       559/559
(100 %)
0 diff
(100 %id)
BP218815 caudate nucleus .a 20 to 600 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DC396916 testis .a 26 to 597 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DC321220 brain .a 34 to 553 1 to 520       520/520
(100 %)
0 diff
(100 %id)
DC342583 thalamus .a 36 to 565 1 to 530       530/530
(100 %)
2 diff
(99.7 %id)
BP281065   .a 36 to 617 1 to 582       582/582
(100 %)
7 diff
(98.8 %id)
DC325694 caudate nucleus .a 37 to 619 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DC404624 thymus .a 37 to 603 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC322711 brain .a 38 to 590 1 to 553       553/553
(100 %)
0 diff
(100 %id)
DC324007 brain .a 38 to 637 1 to 600       600/600
(100 %)
0 diff
(100 %id)
DC326480 caudate nucleus .a 38 to 609 1 to 579       579/579
(100 %)
11 diff
(98.2 %id)
DC332414 hippocampus .a 38 to 565 1 to 528       528/528
(100 %)
1 diff
(99.9 %id)
DC333879 hippocampus .a 38 to 582 1 to 545       545/545
(100 %)
0 diff
(100 %id)
DC333997 hippocampus .a 38 to 597 1 to 561       561/561
(100 %)
7 diff
(98.8 %id)
DC338876 subthalamic nucleus .a 38 to 613 1 to 576       576/576
(100 %)
1 diff
(99.9 %id)
DC341460 thalamus .a 38 to 565 1 to 528       528/528
(100 %)
0 diff
(100 %id)
DC344225 thalamus .a 38 to 595 1 to 558       558/558
(100 %)
0 diff
(100 %id)
BP217672 caudate nucleus .a 38 to 618 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DC349454   .a 38 to 594 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DC372143   .a 38 to 574 1 to 537       537/537
(100 %)
0 diff
(100 %id)
DC372522   .a 38 to 570 1 to 533       533/533
(100 %)
0 diff
(100 %id)
BP335291 coronary artery .a 38 to 614 1 to 577       577/582
(99 %)
2 diff
(99.7 %id)
DC389818 Spleen .a 38 to 565 1 to 528       528/528
(100 %)
0 diff
(100 %id)
DC391390 Spleen .a 38 to 613 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC391794 Spleen .a 38 to 592 1 to 555       555/555
(100 %)
0 diff
(100 %id)
BP349702 brain .a 38 to 619 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP356112   .a 38 to 614 1 to 577       577/582
(99 %)
2 diff
(99.7 %id)
BP356148   .a 38 to 618 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DC396609 testis .a 38 to 592 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC399484 testis .a 38 to 565 1 to 528       528/528
(100 %)
0 diff
(100 %id)
DC400062 testis .a 38 to 604 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC400764 testis .a 38 to 588 1 to 551       551/555
(99 %)
1 diff
(99.9 %id)
DC401136 testis .a 38 to 552 1 to 515       515/515
(100 %)
0 diff
(100 %id)
DC402920 testis .a 38 to 623 1 to 586       586/586
(100 %)
0 diff
(100 %id)
DC404377 testis .a 38 to 629 1 to 592       592/592
(100 %)
0 diff
(100 %id)
DC404384 testis .a 38 to 635 1 to 598       598/598
(100 %)
0 diff
(100 %id)
DC405608 thymus .a 38 to 616 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DC410203 thymus .a 38 to 610 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC410692 thymus .a 38 to 522 1 to 485       485/485
(100 %)
0 diff
(100 %id)
DC414881 trachea .a 38 to 544 1 to 508       508/508
(100 %)
2 diff
(99.7 %id)
DC417574 trachea .a 38 to 618 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC417940 trachea .a 38 to 341 1 to 304       304/304
(100 %)
0 diff
(100 %id)
DC418751 trachea .a 38 to 388 235 to 585       351/585
(60 %)
6 diff
(99.0 %id)
DC418882 trachea .a 38 to 632 1 to 595       595/595
(100 %)
0 diff
(100 %id)
DA408850 thalamus .a 39 to 640 2 to 606   capped   605/605
(100 %)
3 diff
(99.6 %id)
DC299830   .a 40 to 616 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
DC318882 brain .a 40 to 538 1 to 499       499/499
(100 %)
0 diff
(100 %id)
DC322202 brain .a 40 to 604 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC322621 brain .a 40 to 602 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC324431 brain .a 40 to 633 1 to 594       594/594
(100 %)
0 diff
(100 %id)
DC335237 hippocampus .a 40 to 632 1 to 593       593/593
(100 %)
1 diff
(99.9 %id)
DC341993 thalamus .a 40 to 632 1 to 593       593/593
(100 %)
0 diff
(100 %id)
BP238929 Liver .a 40 to 484 1 to 446       446/591
(75 %)
17 diff
(97.2 %id)
DC358418 lung .a 40 to 581 1 to 542       542/542
(100 %)
0 diff
(100 %id)
DC360957   .a 40 to 611 1 to 572       572/572
(100 %)
3 diff
(99.5 %id)
BP335342 coronary artery .a 40 to 620 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DC397807 testis .a 40 to 602 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC403136 testis .a 40 to 582 1 to 543       543/543
(100 %)
0 diff
(100 %id)
DC415828 trachea .a 40 to 539 1 to 500       500/500
(100 %)
0 diff
(100 %id)
DC319757 brain .a 43 to 613 1 to 571       571/571
(100 %)
2 diff
(99.7 %id)
DC428448   .a 43 to 614 1 to 572       572/572
(100 %)
0 diff
(100 %id)
CD699060 normal nasopharynx .a 46 to 522 37 to 513       477/513
(92 %)
7 diff
(98.7 %id)
BP225258   .a 46 to 627 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC354112 brain .a 46 to 525 1 to 480       480/480
(100 %)
1 diff
(99.8 %id)
DC355729   .a 46 to 635 1 to 590       590/590
(100 %)
0 diff
(100 %id)
DC388640 small intestine .a 46 to 519 1 to 474       474/474
(100 %)
0 diff
(100 %id)
DC396349 testis .a 46 to 254 1 to 209       209/210
(99 %)
1 diff
(99.6 %id)
DC400457 testis .a 46 to 590 1 to 545       545/545
(100 %)
0 diff
(100 %id)
DC401017 testis .a 46 to 590 1 to 545       545/545
(100 %)
0 diff
(100 %id)
DC407108 thymus .a 46 to 611 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC298778 adrenal gland .a 48 to 604 1 to 557       557/557
(100 %)
1 diff
(99.9 %id)
AK303176 thymus .a 48 to 2280 1 to 2233 H42R M190V E411* tiling clone,   2233/2233
(100 %)
3 diff
(99.9 %id)
DC316709 amygdala .a 48 to 620 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC321584 brain .a 48 to 609 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
DC322725 brain .a 48 to 599 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC325265 brain .a 48 to 565 1 to 518       518/518
(100 %)
0 diff
(100 %id)
DC325468 brain .a 48 to 648 1 to 601       601/601
(100 %)
0 diff
(100 %id)
DC326392 caudate nucleus .a 48 to 599 1 to 552       552/552
(100 %)
1 diff
(99.9 %id)
DC333472 hippocampus .a 48 to 522 1 to 476       476/476
(100 %)
1 diff
(99.8 %id)
DB444810 testis .a 48 to 483 1 to 437       437/437
(100 %)
3 diff
(99.4 %id)
DC355865   .a 48 to 606 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
DC358177 lung .a 48 to 620 1 to 574       574/574
(100 %)
1 diff
(99.9 %id)
DC371699   .a 48 to 610 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
DC372360   .a 48 to 587 1 to 540       540/540
(100 %)
0 diff
(100 %id)
DC373028 tongue .a 48 to 567 1 to 520       520/520
(100 %)
0 diff
(100 %id)
DC379522 pericardium .a 48 to 602 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
DC390959 Spleen .a 48 to 601 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DC392554 stomach .a 48 to 569 1 to 522       522/522
(100 %)
0 diff
(100 %id)
DC400958 testis .a 48 to 599 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC404132 testis .a 48 to 645 1 to 598       598/598
(100 %)
0 diff
(100 %id)
DC404859 thymus .a 48 to 608 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC404865 thymus .a 48 to 610 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC406061 thymus .a 48 to 590 1 to 543       543/543
(100 %)
1 diff
(99.9 %id)
DC406906 thymus .a 48 to 581 1 to 534       534/534
(100 %)
1 diff
(99.9 %id)
DC407098 thymus .a 48 to 614 1 to 568       568/568
(100 %)
2 diff
(99.7 %id)
DC415790 trachea .a 48 to 522 1 to 475       475/475
(100 %)
0 diff
(100 %id)
DC416160 trachea .a 48 to 607 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC360746   .a 49 to 601 1 to 553       553/553
(100 %)
0 diff
(100 %id)
DC324755 brain .a 50 to 635 1 to 586       586/586
(100 %)
2 diff
(99.7 %id)
DC334793 hippocampus .a 50 to 604 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC366138   .a 50 to 593 1 to 544       544/544
(100 %)
0 diff
(100 %id)
DC368344   .a 50 to 699 1 to 650       650/650
(100 %)
0 diff
(100 %id)
DC372051   .a 50 to 599 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DC372093   .a 50 to 569 1 to 520       520/520
(100 %)
1 diff
(99.9 %id)
DC390180 Spleen .a 50 to 623 1 to 574       574/574
(100 %)
1 diff
(99.9 %id)
DC404024 testis .a 50 to 594 1 to 545       545/545
(100 %)
0 diff
(100 %id)
DC404414 testis .a 50 to 639 1 to 589       589/589
(100 %)
1 diff
(99.9 %id)
DC417572 trachea .a 50 to 503 1 to 454       454/454
(100 %)
1 diff
(99.8 %id)
DC418413 trachea .a 50 to 598 1 to 549       549/549
(100 %)
0 diff
(100 %id)
DC335617 hippocampus .a 54 to 519 1 to 466       466/466
(100 %)
0 diff
(100 %id)
DC328616 corpus callosum .a 58 to 638 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP201977 amygdala .a 59 to 640 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC320351 brain .a 59 to 628 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
DC321615 brain .a 59 to 626 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
DC322948 brain .a 59 to 637 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
DC323699 brain .a 59 to 624 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DC324294 brain .a 59 to 565 1 to 507       507/507
(100 %)
0 diff
(100 %id)
DC332172 hippocampus .a 59 to 625 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC343784 thalamus .a 59 to 594 1 to 536       536/536
(100 %)
0 diff
(100 %id)
DB462544 testis .a 59 to 532 1 to 474       474/474
(100 %)
1 diff
(99.8 %id)
BP235040 coronary artery .a 59 to 640 1 to 582       582/582
(100 %)
8 diff
(98.7 %id)
BP242441 Liver .a 59 to 630 1 to 573       573/573
(100 %)
4 diff
(99.4 %id)
BP279699   .a 59 to 641 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
CR994533 T-Lymphocytes .a 59 to 871 1 to 814       814/814
(100 %)
1 diff
(99.9 %id)
DC392078 Spleen .a 59 to 613 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC401363 testis .a 59 to 583 1 to 525       525/525
(100 %)
0 diff
(100 %id)
DC407890 thymus .a 59 to 610 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC408924 thymus .a 59 to 465 1 to 407       407/416
(97 %)
1 diff
(99.8 %id)
DC417949 trachea .a 59 to 647 1 to 589       589/589
(100 %)
1 diff
(99.9 %id)
DB144650 thymus .a 60 to 596 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DC327639 caudate nucleus .a 62 to 629 1 to 568       568/568
(100 %)
0 diff
(100 %id)
CX867723 embryonic stem .a 63 to 847 1 to 785   tiling clone,   785/785
(100 %)
0 diff
(100 %id)
BP199041 brain .a 64 to 645 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC300668 bladder .a 64 to 613 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DC344108 thalamus .a 64 to 664 1 to 605       605/605
(100 %)
4 diff
(99.4 %id)
DC401961 testis .a 64 to 628 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC403069 testis .a 64 to 610 1 to 547       547/547
(100 %)
1 diff
(99.9 %id)
DC408822 thymus .a 64 to 581 1 to 519       519/519
(100 %)
1 diff
(99.9 %id)
BP365107 lung .a 64 to 646 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BP365291 lung .a 65 to 651 1 to 587       587/587
(100 %)
2 diff
(99.7 %id)
DC316565 amygdala .a 68 to 624 1 to 557       557/557
(100 %)
2 diff
(99.7 %id)
DC321823 brain .a 68 to 632 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DB449788 testis .a 68 to 512 1 to 445       445/445
(100 %)
6 diff
(98.7 %id)
DC367053   .a 68 to 587 1 to 521       521/521
(100 %)
1 diff
(99.9 %id)
DC389275 Spleen .a 68 to 657 1 to 589       589/589
(100 %)
1 diff
(99.9 %id)
DC390035 Spleen .a 68 to 651 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
DC317491 amygdala .a 69 to 613 1 to 545       545/545
(100 %)
0 diff
(100 %id)
DC415566 trachea .a 69 to 522 1 to 454       454/454
(100 %)
1 diff
(99.8 %id)
AU129911   .a 70 to 769 20 to 726   capped   707/716
(98 %)
16 diff
(97.8 %id)
DC402088 testis .a 70 to 615 1 to 546       546/546
(100 %)
0 diff
(100 %id)
DC343041 thalamus .a 75 to 657 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
CD642857 Embryonic Stem cells .a 77 to 854 3 to 779       777/779
(99 %)
8 diff
(99.0 %id)
AL046792 testis .a 79 to 595 1 to 517       517/517
(100 %)
0 diff
(100 %id)
AL046798 testis .a 79 to 705 1 to 627       627/627
(100 %)
0 diff
(100 %id)
AF000984   .a 81 to 4490 1 to 4406 R46K M219V N628D tiling clone, AAA   4406/4406
(100 %)
14 diff
(99.7 %id)
AF000985   .a 81 to 2389 1 to 2309 R46K M219V N628D tiling clone, AAA   2309/2309
(100 %)
4 diff
(99.9 %id)
DN989347 brain, whole brain .a 81 to 775 8 to 702       695/702
(99 %)
6 diff
(99.2 %id)
BP199383 brain .a 83 to 664 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP199403 brain .a 83 to 661 1 to 581       581/582
(99 %)
16 diff
(97.3 %id)
AU279665   .a 83 to 653 1 to 571       571/571
(100 %)
0 diff
(100 %id)
BP241923 Liver .a 83 to 660 1 to 579       579/579
(100 %)
4 diff
(99.4 %id)
DB119746 thymus .a 83 to 565 2 to 484   capped   483/483
(100 %)
1 diff
(99.8 %id)
DB240261 trachea .a 83 to 659 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA033133   .a 84 to 612 2 to 531   capped   530/530
(100 %)
3 diff
(99.5 %id)
DA218495 brain .a 84 to 612 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA314570 hippocampus .a 84 to 635 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
CN282462 embryonic stem cells, cell lines H1, H7, andH9 .a 84 to 789 1 to 706       706/706
(100 %)
1 diff
(99.9 %id)
DA468470   .a 84 to 619 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DA481094   .a 84 to 619 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA554065   .a 84 to 640 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA555685   .a 84 to 565 2 to 484   capped   483/483
(100 %)
2 diff
(99.6 %id)
DA589549 lung .a 84 to 630 2 to 549   capped   548/548
(100 %)
3 diff
(99.5 %id)
DA593899 lung .a 84 to 645 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA694893   .a 84 to 654 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA698510   .a 84 to 611 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
DA761369 tongue .a 84 to 601 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DA763604 tongue .a 84 to 661 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DA764340 tongue .a 84 to 654 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA960071 Spleen .a 84 to 625 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DB148176 thymus .a 84 to 668 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DB151496 thymus .a 84 to 538 2 to 456   capped   455/455
(100 %)
1 diff
(99.8 %id)
DB154715 thymus .a 84 to 644 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB198944 trachea .a 84 to 659 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DB203545 trachea .a 84 to 663 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DB230570 trachea .a 84 to 676 2 to 595   capped   594/595
(99 %)
2 diff
(99.7 %id)
DB241416 trachea .a 84 to 673 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA556836   .a 86 to 638 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
BM835031 stomach .a 86 to 510 1 to 425       425/425
(100 %)
0 diff
(100 %id)
DA012990 adrenal gland .a 87 to 656 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA219379 brain .a 87 to 540 2 to 455   capped   454/454
(100 %)
0 diff
(100 %id)
DA242463 brain .a 87 to 672 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA329376 hippocampus .a 87 to 565 2 to 480   capped   479/479
(100 %)
0 diff
(100 %id)
DA557819   .a 87 to 666 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA580615   .a 87 to 661 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BP219830 caudate nucleus .a 94 to 675 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BM807304 duodenal adenocarcinoma, cell line, small intestine .a 94 to 831 1 to 745       745/1077
(69 %)
15 diff
(98.7 %id)
DB155101 thymus .a 94 to 677 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DB231584 trachea .a 96 to 685 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
BP337524 coronary artery .a 97 to 677 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DB067375 testis .a 97 to 644 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA230764 brain .a 98 to 669 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA281750 corpus callosum .a 98 to 666 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA404094 thalamus .a 98 to 645 2 to 550   capped   549/549
(100 %)
3 diff
(99.5 %id)
DA473996   .a 98 to 669 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA701074   .a 98 to 621 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
DA942559 Spleen .a 98 to 688 2 to 592   capped   591/596
(99 %)
2 diff
(99.7 %id)
DB066664 testis .a 98 to 630 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
DB090762 testis .a 98 to 670 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB100265 testis .a 98 to 686 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DB116908 thymus .a 98 to 501 2 to 405   capped   404/404
(100 %)
1 diff
(99.8 %id)
DB126892 thymus .a 98 to 565 2 to 469   capped   468/468
(100 %)
0 diff
(100 %id)
DB127841 thymus .a 98 to 663 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB179571 kidney, tumor tissue .a 98 to 639 2 to 544   capped   543/543
(100 %)
3 diff
(99.5 %id)
DB226020 trachea .a 98 to 659 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DB231734 trachea .a 98 to 532 2 to 436   capped   435/435
(100 %)
0 diff
(100 %id)
DB234986 trachea .a 98 to 673 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DB459010 testis .a 99 to 577 1 to 479       479/479
(100 %)
0 diff
(100 %id)
DA481976   .a 100 to 662 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA723274   .a 100 to 668 2 to 573   capped   570/572
(99 %)
7 diff
(98.8 %id)
DB203444 trachea .a 100 to 598 2 to 501   capped   500/501
(99 %)
6 diff
(98.9 %id)
DA961344 Spleen .a 101 to 672 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DB070333 testis .a 101 to 623 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
BM564328 blood, natural killer cells, cell line .a 104 to 675 1 to 572       572/1447
(39 %)
14 diff
(99.1 %id)
CD651879 Embryonic Stem cells .a 107 to 824 12 to 727       716/783
(91 %)
14 diff
(98.3 %id)
DA212306 brain .a 111 to 673 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
CN282463 embryonic stem cells, cell lines H1, H7, andH9 .a 121 to 443 1 to 323       323/323
(100 %)
3 diff
(99.1 %id)
CX867648 embryonic stem .a 3747 to 4490 771 to 28   tiling clone, AAA   744/744
(100 %)
2 diff
(99.8 %id)
DB367187   .a 3978 to 4490 513 to 1   tiling clone,   513/529
(96 %)
15 diff
(97.2 %id)
BG721855 testis .b 1 to 613 7 to 616       616/619
(99 %)
8 diff
(98.8 %id)
BI459019 testis .b 1 to 749 7 to 762       762/779
(97 %)
25 diff
(96.8 %id)
BC034942 testis .b 1 to 2696 2 to 2697 exact tiling clone, available from MGC, AAA   2697/2697
(100 %)
0 diff
(100 %id)
DB449135 testis .b 1 to 427 2 to 428       428/432
(99 %)
1 diff
(99.8 %id)
NM_001122665.1   .b 1 to 4647 2 to 4648 exact RefSeq,   4648/4648
(100 %)
0 diff
(100 %id)
DB040975 testis .b 1 to 562 3 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DB080232 testis .b 1 to 570 3 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB031995 testis .b 1 to 545 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB040752 testis .b 1 to 558 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB045784 testis .b 1 to 564 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
CD358163 testis .b 11 to 844 1 to 838       838/857
(97 %)
8 diff
(99.1 %id)
CV024231 mixed .b 309 to 797 1 to 488       488/488
(100 %)
7 diff
(98.6 %id)
CD244264 testis .b 497 to 1312 1 to 820       820/864
(94 %)
6 diff
(99.4 %id)
DB071964 testis .b 515 to 1055 2 to 543   capped   542/542
(100 %)
2 diff
(99.7 %id)
DB096049 testis .b 781 to 1336 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BM804518 lymph, lymphoma, cell line .b 788 to 1423 12 to 647       636/1120
(56 %)
13 diff
(98.9 %id)
BP327232 prostata .b 789 to 1369 1 to 582       582/583
(99 %)
3 diff
(99.5 %id)
DB230151 trachea .b 792 to 1382 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA239819 brain .b 798 to 1361 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BP337427 coronary artery .b 871 to 1452 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
CX781521 human embryonic stem cells .b 1094 to 1844 1 to 750       750/750
(100 %)
1 diff
(99.9 %id)
DA760314   .b 1229 to 1779 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA245188 brain .b 1240 to 1824 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DB215968 trachea .b 1258 to 1806 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
AL045945 testis .b 1291 to 1835 1 to 545       545/545
(100 %)
2 diff
(99.7 %id)
BU428917 lymph .b 1295 to 1647 1 to 353       353/353
(100 %)
6 diff
(98.4 %id)
TI_154149846   .b 1302 to 1801 53 to 553       501/523
(95 %)
10 diff
(98.1 %id)
BP211071 cerebellum .b 1353 to 1932 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
DB090047 testis .b 1441 to 1995 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB099714 testis .b 1446 to 2026 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
AU123899   .b 1456 to 2154 2 to 712   capped   711/742
(95 %)
14 diff
(98.2 %id)
BG255707 adenocarcinoma, cell line, Prostate .b 1479 to 2214 1 to 729       729/880
(82 %)
17 diff
(98.1 %id)
AA322065 brain, cerebellum .b 1484 to 1774 1 to 294       294/294
(100 %)
3 diff
(99.0 %id)
DB158790 thymus .b 1563 to 2147 2 to 587   capped   586/587
(99 %)
3 diff
(99.5 %id)
DA745172   .b 1579 to 2053 2 to 476   capped   475/475
(100 %)
0 diff
(100 %id)
BF089957 marrow .b 1639 to 2140 32 to 542       511/542
(94 %)
23 diff
(95.8 %id)
CR975409 T-Lymphocytes .b 1662 to 2484 1 to 822       822/823
(99 %)
2 diff
(99.8 %id)
DA117839 cerebellum .b 1713 to 2266 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
BP243567 Liver .b 1729 to 2301 1 to 574       574/575
(99 %)
4 diff
(99.4 %id)
CD251965 testis .b 1744 to 2492 1 to 759       759/932
(81 %)
12 diff
(98.8 %id)
H97444 melanocyte .b 1748 to 1906 1 to 159       159/160
(99 %)
2 diff
(98.8 %id)
ES311173 scalp interfollicular dermis, skin .b 1856 to 2365 1 to 515       514/627
(81 %)
14 diff
(97.8 %id)
AI985506 Kidney .b 1869 to 2443 577 to 1       575/577
(99 %)
20 diff
(96.6 %id)
BM787252 stomach .b 1873 to 2434 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
CX754179 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 1907 to 2696 8 to 785     Submitted on the opposite strand 778/778
(100 %)
14 diff
(98.3 %id)
AU128338   .b 1908 to 2652 2 to 751   capped   750/830
(90 %)
16 diff
(98.1 %id)
BE938106 testis_normal .b 1917 to 2310 10 to 402       393/469
(83 %)
11 diff
(97.7 %id)
N85185   .b 1917 to 2301 11 to 396       386/403
(95 %)
22 diff
(94.6 %id)
BP237352 Liver .b 1966 to 2582 1 to 617       617/617
(100 %)
0 diff
(100 %id)
BP361097 thalamus .b 1984 to 2563 1 to 580       580/587
(98 %)
1 diff
(99.9 %id)
BQ427895 melanotic melanoma, skin .b 2035 to 2705 1 to 671   AAA   671/671
(100 %)
0 diff
(100 %id)
AA572900   .b 2083 to 2443 8 to 367   AAA   360/367
(98 %)
6 diff
(98.4 %id)
AI640778 Kidney .b 2085 to 2439 358 to 5       354/358
(98 %)
7 diff
(98.1 %id)
AA774991 schizophrenic brain S-11 frontal lobe .b 2097 to 2510 417 to 1       417/417
(100 %)
3 diff
(99.3 %id)
AI809879 pooled .b 2106 to 2532 443 to 17   AAA   427/427
(100 %)
1 diff
(99.8 %id)
G49470   .b 2107 to 2546 1 to 440   AAA   440/440
(100 %)
2 diff
(99.6 %id)
DB514160 testis .b 2113 to 2546 1 to 434     Submitted on the opposite strand 434/434
(100 %)
7 diff
(98.4 %id)
DB525983 testis .b 2117 to 2529 1 to 413     Submitted on the opposite strand 413/415
(99 %)
2 diff
(99.6 %id)
AA318463 Spleen .b 2120 to 2450 1 to 333       333/333
(100 %)
3 diff
(99.1 %id)
BP243767 Liver .b 2125 to 2693 1 to 569       569/570
(99 %)
9 diff
(98.5 %id)
BQ897970 dorsal root ganglia .b 2210 to 2973 40 to 809       770/1012
(76 %)
28 diff
(97.3 %id)
CR981580 T-Lymphocytes .b 2214 to 3134 1 to 928       928/928
(100 %)
14 diff
(98.5 %id)
DB345484.
matches multiple genes
thymus .b 2231 to 2766 537 to 1     also hits gene yutuyu 537/537
(100 %)
2 diff
(99.7 %id)
BP243486 Liver .b 2247 to 2801 1 to 556       556/556
(100 %)
7 diff
(98.8 %id)
DB519615 testis .b 2248 to 2696 1 to 449     Submitted on the opposite strand 449/449
(100 %)
0 diff
(100 %id)
AI132951 Liver .b 2302 to 3008 728 to 17       712/728
(97 %)
0 diff
(100 %id)
DA942545 Spleen .b 2310 to 2914 2 to 607   capped   606/606
(100 %)
1 diff
(99.9 %id)
DB170237 kidney, tumor tissue .b 2322 to 2893 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
CD557228 testis .b 2327 to 3212 1 to 896       896/897
(99 %)
14 diff
(98.5 %id)
DB199927 trachea .b 2334 to 2899 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BX479935   .b 2347 to 2844 1 to 499       499/499
(100 %)
4 diff
(99.2 %id)
AA448087   .b 2349 to 2697 1 to 348   fully sequenced,   348/348
(100 %)
1 diff
(99.8 %id)
BP242753 Liver .b 2381 to 2956 1 to 576       576/576
(100 %)
2 diff
(99.7 %id)
BG261351 bladder, transitional cell papilloma, cell line .b 2387 to 3048 1 to 654       654/924
(70 %)
18 diff
(98.1 %id)
AA447588   .b 2427 to 2699 273 to 1   fully sequenced,   273/273
(100 %)
0 diff
(100 %id)
DB123861 thymus .b 2455 to 3017 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
BX498905 Liver .b 2456 to 3061 1 to 606       606/606
(100 %)
5 diff
(99.2 %id)
AA730189 pooled germ cell tumors .b 2468 to 2699 277 to 46   AAA   232/232
(100 %)
1 diff
(99.6 %id)
DA156199 amygdala .b 2484 to 3041 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DB119865 thymus .b 2564 to 3103 2 to 542   capped   541/541
(100 %)
2 diff
(99.7 %id)
AV722054 hypothalamus .b 2586 to 3063 22 to 489       468/489
(95 %)
6 diff
(98.8 %id)
AU279572   .b 2605 to 3148 1 to 544       544/544
(100 %)
1 diff
(99.9 %id)
EC544204 Prostate .b 2612 to 2724 1 to 112       112/112
(100 %)
1 diff
(99.2 %id)
EC574094 Prostate .b 2612 to 2724 1 to 112       112/112
(100 %)
1 diff
(99.2 %id)
DA965275 stomach .b 2627 to 3196 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA954087 Spleen .b 2628 to 3203 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
BP239296 Liver .b 2654 to 3206 1 to 553       553/553
(100 %)
1 diff
(99.9 %id)
BP257533 heart .b 2671 to 3238 1 to 568       568/568
(100 %)
8 diff
(98.6 %id)
BE542708 cervix .b 2677 to 3281 1 to 605       605/820
(73 %)
10 diff
(98.8 %id)
BP292179 lung .b 2687 to 3258 1 to 572   tiling clone,   572/572
(100 %)
0 diff
(100 %id)
DA942320 Spleen .b 2690 to 3283 2 to 597   capped   596/599
(99 %)
4 diff
(99.4 %id)
BP259645 heart .b 2694 to 3245 1 to 552       552/561
(98 %)
2 diff
(99.7 %id)
CX783434 human embryonic stem cells .b 2783 to 3610 1 to 828   tiling clone,   828/832
(99 %)
3 diff
(99.7 %id)
AU150637   .b 4056 to 4647 588 to 1   tiling clone,   588/588
(100 %)
11 diff
(98.2 %id)
AK302172 testis .c 1 to 2330 1 to 2330 exact tiling clone,   2330/2330
(100 %)
0 diff
(100 %id)
DC398216 testis .c 1 to 579 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DB060070 testis .c 20 to 547 2 to 530   capped   529/530
(99 %)
4 diff
(99.3 %id)
BP337458 coronary artery .c 75 to 658 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
AK307884 hippocampus .d 1 to 1627 2 to 1629 E361K N363K M364Y N365E I366Y ... tiling clone,   1629/1629
(100 %)
2 diff
(99.9 %id)
DA329588 hippocampus .d 1 to 560 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DB460576 testis .e 1 to 475 2 to 476       476/476
(100 %)
0 diff
(100 %id)
DC395509 testis .e 1 to 551 2 to 552       552/552
(100 %)
0 diff
(100 %id)
DC396579 testis .e 1 to 566 2 to 567   tiling clone,   567/567
(100 %)
0 diff
(100 %id)
BM563869 brain, medulla .e 13 to 1059 21 to 1068       1048/1069
(98 %)
20 diff
(98.2 %id)
AK296366 thalamus .e 331 to 1285 1 to 955 exact tiling clone,   955/955
(100 %)
0 diff
(100 %id)
CR997528 T-Lymphocytes .e 842 to 1686 1 to 847   tiling clone,   847/847
(100 %)
2 diff
(99.8 %id)
CD653055 Embryonic Stem cells .e 863 to 1480 7 to 622       616/805
(76 %)
26 diff
(96.8 %id)
DA404256 thalamus .e 1137 to 1703 2 to 569   tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
DC408791 thymus .e 1592 to 2133 1 to 541   tiling clone,   541/541
(100 %)
1 diff
(99.9 %id)
CD654010 Embryonic Stem cells .f 1 to 789 6 to 785   tiling clone,   780/828
(94 %)
12 diff
(98.6 %id)
CD358766 testis .f 49 to 802 1 to 756   tiling clone,   756/873
(86 %)
4 diff
(99.6 %id)
DA226624 brain .f 800 to 1281 2 to 483   tiling clone, capped   482/482
(100 %)
0 diff
(100 %id)
CB986859 Pooled-Glandular .f 810 to 1140 1 to 333       333/882
(37 %)
18 diff
(98.0 %id)
AK310382 testis .g 1 to 997 1 to 997 exact tiling clone,   997/997
(100 %)
0 diff
(100 %id)
CD047818 embryonic stem cells, WA01, passage 38 .g 2 to 820 23 to 845       823/884
(93 %)
14 diff
(98.5 %id)
CD654500 Embryonic Stem cells .g 11 to 822 9 to 809       801/862
(92 %)
29 diff
(96.7 %id)
CD652247 Embryonic Stem cells .h 1 to 672 13 to 679   tiling clone,   675/793
(85 %)
14 diff
(98.3 %id)
AI831733 2 pooled tumors (clear cell type), Kidney .h 491 to 1064 574 to 1       574/574
(100 %)
5 diff
(99.2 %id)
BP352036   .h 493 to 1068 7 to 581   tiling clone,   575/581
(98 %)
16 diff
(97.3 %id)
AA836690 germinal center B cell .h 533 to 1053 520 to 3   tiling clone,   518/520
(99 %)
2 diff
(99.7 %id)
DB229509 trachea .h 717 to 1217 2 to 504   tiling clone, capped   503/503
(100 %)
1 diff
(99.9 %id)
DB349921 trachea .h 1963 to 2513 551 to 1   tiling clone,   551/552
(99 %)
0 diff
(100 %id)
DB214213 trachea .i 1 to 561 2 to 562   tiling clone, capped   561/561
(100 %)
1 diff
(99.9 %id)
DB231866 trachea .i 212 to 805 2 to 597   tiling clone, capped   596/596
(100 %)
3 diff
(99.5 %id)
BM828395 stomach .i 643 to 1319 1 to 677   tiling clone,   677/677
(100 %)
0 diff
(100 %id)
DA307450 hippocampus .j 1 to 580 2 to 581 exact capped   580/580
(100 %)
3 diff
(99.5 %id)
BP354735   .j 2 to 581 1 to 582 C126V D127* tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
BP354774   .j 2 to 583 1 to 581 S70N S71R W134C K136N P137H ...     581/581
(100 %)
8 diff
(98.7 %id)
DA587523 lung .j 4 to 564 2 to 562 K35E capped   561/561
(100 %)
2 diff
(99.7 %id)
DA941336 Spleen .j 4 to 589 18 to 603 exact capped   586/586
(100 %)
0 diff
(100 %id)
DB235352 trachea .j 4 to 596 2 to 593 P139S capped   592/592
(100 %)
3 diff
(99.5 %id)
DA241144 brain .j 14 to 607 2 to 595 exact capped   594/594
(100 %)
2 diff
(99.7 %id)
DA399435 thalamus .j 14 to 561 2 to 549 exact capped   548/548
(100 %)
0 diff
(100 %id)
DA939603 Spleen .j 14 to 580 2 to 568 exact capped   567/567
(100 %)
1 diff
(99.9 %id)
DB106775 thymus .j 14 to 582 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DB206374 trachea .j 14 to 592 2 to 580 exact capped   579/579
(100 %)
0 diff
(100 %id)
DB229715 trachea .j 14 to 591 2 to 579 exact capped   578/578
(100 %)
0 diff
(100 %id)
DB162469 thymus .j 16 to 573 2 to 559 exact capped   558/558
(100 %)
0 diff
(100 %id)
DB029690 testis .j 34 to 604 2 to 572 exact capped   571/571
(100 %)
1 diff
(99.9 %id)
DB151638 thymus .j 34 to 599 2 to 568 L16P A17C N18* capped   567/567
(100 %)
2 diff
(99.7 %id)
DB160970 thymus .j 34 to 601 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
DA961472 Spleen .j 48 to 632 2 to 586 R111G capped   585/585
(100 %)
1 diff
(99.9 %id)
DA554656   .j 49 to 597 2 to 550 exact capped   549/549
(100 %)
0 diff
(100 %id)
DB222035 trachea .j 49 to 594 2 to 548 L16P A17C N18* capped   547/547
(100 %)
2 diff
(99.7 %id)
DA418060 thalamus .j 63 to 610 2 to 550 R37P Y38L I39Y P40T P41S ... capped   549/549
(100 %)
1 diff
(99.9 %id)
DA417229 thalamus .j 89 to 648 2 to 561 exact tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
BC011022 Prostate .k 1 to 529 1 to 529 exact tiling clone, available from MGC, AAA   529/529
(100 %)
2 diff
(99.7 %id)
BF673736 Prostate .k 4 to 530 1 to 530   available from MGC,   530/865
(61 %)
10 diff
(98.9 %id)
DB029075 testis .l-u 1 to 540 2 to 542   tiling clone, capped   541/541
(100 %)
3 diff
(99.5 %id)
CA393679 eye, RPE/choroid .l-u 35 to 507 1 to 473       473/473
(100 %)
2 diff
(99.6 %id)
BX456914 thymus .l-u 62 to 767 1 to 705 exact tiling clone,   705/705
(100 %)
28 diff
(96.1 %id)
BM955866 tonsil .l-u 105 to 496 1 to 392       392/392
(100 %)
0 diff
(100 %id)
BQ716865 dorsal root ganglia .l-u 197 to 946 1 to 751 exact     751/962
(78 %)
16 diff
(98.4 %id)
BQ718381 sympathetic trunk .l-u 328 to 1297 1 to 974 exact tiling clone,   974/976
(99 %)
24 diff
(97.6 %id)
CF142153 CNCAP(3)T-225 cell line, Prostate .l-u 415 to 705 8 to 298 exact     291/298
(97 %)
6 diff
(98.0 %id)
TI_154172994   .l-u 415 to 900 87 to 572 exact     486/1008
(48 %)
23 diff
(97.8 %id)
CA406298 adipose .l-u 455 to 658 1 to 203       203/203
(100 %)
2 diff
(99.1 %id)
BG741202 skin .l-u 592 to 1463 1 to 875       875/911
(96 %)
24 diff
(97.4 %id)
DR421958 eye, Pterygium .l-u 646 to 1319 1 to 674       674/674
(100 %)
1 diff
(99.9 %id)
CK429237 eye, lacrimal gland .l-u 734 to 1399 1 to 667       667/667
(100 %)
1 diff
(99.9 %id)
EC504284 Prostate .l-u 782 to 892 110 to 1       110/110
(100 %)
1 diff
(99.1 %id)
CB128598 Liver .l-u 783 to 1262 1 to 480       480/480
(100 %)
3 diff
(99.4 %id)
EC553264 Prostate .l-u 822 to 934 111 to 1       111/111
(100 %)
2 diff
(98.2 %id)
CA390258 eye, RPE/choroid .l-u 884 to 952 1 to 69       69/69
(100 %)
1 diff
(98.6 %id)
TI_154115674   .l-u 918 to 1720 889 to 87   AAA   803/973
(82 %)
9 diff
(99.1 %id)
BU958775 mixed (pool of 40 RNAs) .l-u 919 to 1647 1 to 733       733/742
(98 %)
10 diff
(98.7 %id)
W52889 Pancreas, pancreatic islet .l-u 951 to 1446 1 to 499   fully sequenced,   499/499
(100 %)
1 diff
(99.8 %id)
W37634 parathyroid gland, parathyroid tumor .l-u 1011 to 1393 1 to 384     Submitted on the opposite strand 384/384
(100 %)
1 diff
(99.8 %id)
BQ010089 Chondrosarcoma, Left Pubic Bone .l-u 1018 to 1720 721 to 19   AAA   703/703
(100 %)
3 diff
(99.6 %id)
BQ015236 Chondrosarcoma, Left Pubic Bone .l-u 1019 to 1720 720 to 19   AAA   702/702
(100 %)
3 diff
(99.6 %id)
BM723220 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .l-u 1024 to 1704 1 to 681   tiling clone,   681/681
(100 %)
0 diff
(100 %id)
AW379592 head_neck .l-u 1031 to 1239 9 to 217       209/217
(96 %)
6 diff
(97.3 %id)
CK904858 Islets of Langerhans, Pancreas .l-u 1035 to 1630 1 to 596       596/596
(100 %)
1 diff
(99.9 %id)
CN480253 Knee, Osteoarthritic Cartilage .l-u 1043 to 1720 696 to 19   tiling clone, AAA   678/678
(100 %)
0 diff
(100 %id)
BQ006257 Chondrosarcoma, Left Pelvis .l-u 1045 to 1720 694 to 19   AAA   676/676
(100 %)
0 diff
(100 %id)
BQ774365 Chondrosarcoma Grade II, Left Pelvis .l-u 1045 to 1720 694 to 19   AAA   676/676
(100 %)
9 diff
(98.7 %id)
EC565481 Prostate .l-u 1046 to 1168 120 to 1       120/120
(100 %)
3 diff
(97.5 %id)
BM055220 Islets of Langerhans, Pancreas .l-u 1051 to 1571 1 to 521       521/521
(100 %)
3 diff
(99.5 %id)
W32612 parathyroid gland, parathyroid tumor .l-u 1064 to 1313 1 to 252       252/252
(100 %)
3 diff
(98.9 %id)
CB160793 Liver .l-u 1064 to 1681 1 to 618       618/618
(100 %)
0 diff
(100 %id)
BQ003181 Chondrosarcoma, Left Pelvis .l-u 1095 to 1704 621 to 12   AAA   610/610
(100 %)
2 diff
(99.7 %id)
BQ009351 Chondrosarcoma, Left Pubic Bone .l-u 1103 to 1720 636 to 19   AAA   618/618
(100 %)
0 diff
(100 %id)
TI_154099090   .l-u 1123 to 1720 681 to 85   AAA   597/783
(76 %)
30 diff
(96.2 %id)
CB962837 Blood vessels - aorta, basilar and artery .l-u 1159 to 1720 1 to 562       562/564
(99 %)
1 diff
(99.9 %id)
CB987420 Pooled-Glandular .l-u 1203 to 1720 1 to 520       520/726
(71 %)
14 diff
(98.1 %id)
AL691565 human spinal cord .l-u 1218 to 1720 522 to 20   AAA   503/503
(100 %)
0 diff
(100 %id)
DB524495 testis .l-u 1233 to 1718 1 to 486     Submitted on the opposite strand 486/488
(99 %)
1 diff
(99.8 %id)
AA484047 Ewing's sarcoma .l-u 1257 to 1641 1 to 385       385/385
(100 %)
5 diff
(98.8 %id)
AA629589 lung, lung carcinoma .l-u 1272 to 1720 449 to 1       449/449
(100 %)
0 diff
(100 %id)
AA876297 2 pooled tumors (clear cell type), Kidney .l-u 1273 to 1720 451 to 4       448/451
(99 %)
0 diff
(100 %id)
DB515073 testis .l-u 1284 to 1720 1 to 435     Submitted on the opposite strand 435/435
(100 %)
3 diff
(99.4 %id)
BM995760 Chondrosarcoma, Left Pubic Bone .l-u 1289 to 1720 450 to 19   AAA   432/432
(100 %)
2 diff
(99.6 %id)
BP420534 small intestine .l-u 1295 to 1720 1 to 426     Submitted on the opposite strand 426/430
(99 %)
1 diff
(99.8 %id)
W37633 parathyroid gland, parathyroid tumor .l-u 1302 to 1700 398 to 1     Submitted on the opposite strand 398/399
(99 %)
1 diff
(99.8 %id)
W32514 parathyroid gland, parathyroid tumor .l-u 1314 to 1720 412 to 1       412/412
(100 %)
9 diff
(97.9 %id)
DB509753 testis .l-u 1332 to 1720 1 to 390     Submitted on the opposite strand 390/390
(100 %)
6 diff
(98.5 %id)
EC558513 Prostate .l-u 1333 to 1441 1 to 109       109/110
(99 %)
1 diff
(99.1 %id)
AI351813 pooled germ cell tumors .l-u 1333 to 1720 387 to 1       387/387
(100 %)
8 diff
(98.0 %id)
AI801742 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .l-u 1344 to 1720 377 to 1       377/377
(100 %)
3 diff
(99.3 %id)
AW440805 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .l-u 1356 to 1720 367 to 3       365/367
(99 %)
0 diff
(100 %id)
AW969765   .l-u 1370 to 1633 265 to 1     Submitted on the opposite strand 265/266
(99 %)
18 diff
(93.3 %id)
AW299980 Kidney .l-u 1379 to 1720 342 to 1       342/342
(100 %)
4 diff
(98.9 %id)
AI220340 pooled .l-u 1381 to 1720 339 to 2       338/339
(99 %)
0 diff
(100 %id)
W60097 Pancreas, pancreatic islet .l-u 1416 to 1725 315 to 4   fully sequenced,   312/315
(99 %)
6 diff
(98.1 %id)
AI926013 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .l-u 1447 to 1720 288 to 14   AAA   275/275
(100 %)
1 diff
(99.7 %id)
CA394912 eye, RPE/choroid .l-u 1566 to 1720 1 to 155   AAA   155/155
(100 %)
0 diff
(100 %id)
DA231012 brain .m-u 1 to 559 2 to 559 F85L R87E S88V tiling clone, capped   558/558
(100 %)
1 diff
(99.9 %id)
DB074644 testis .m-u 207 to 736 2 to 532   tiling clone, capped   531/531
(100 %)
1 diff
(99.9 %id)
DA403810 thalamus .n-u 1 to 544 2 to 550 exact tiling clone, capped   549/550
(99 %)
9 diff
(98.4 %id)
AW977622   .n-u 45 to 572 529 to 1 exact tiling clone, Submitted on the opposite strand 529/529
(100 %)
20 diff
(96.3 %id)
AA806363 germinal center B cell .n-u 118 to 580 465 to 3 exact tiling clone,   463/465
(99 %)
0 diff
(100 %id)
AA811802 germinal center B cell .n-u 125 to 580 458 to 3 exact     456/458
(99 %)
0 diff
(100 %id)
BX093409 2 pooled tumors (clear cell type), Kidney .o 1 to 507 1 to 507 exact tiling clone,   507/507
(100 %)
1 diff
(99.9 %id)
DB216690 trachea .p 1 to 481 2 to 482 C36L T37Y S38* tiling clone, capped   481/481
(100 %)
2 diff
(99.6 %id)
AK303638 thymus Gene DDX3Y, variant not shown         Suspected internal deletion, this clone was ignored    
AV660362 corresponding non cancerous liver tissue Gene DDX3Y, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BJ990501 hepatoblastoma Gene DDX3Y, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
BJ990502 hepatoblastoma Gene DDX3Y, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
DA589465 lung Gene DDX3Y, variant not shown       capped Suspected internal deletion, this clone was ignored    
DA755830   Gene DDX3Y, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB099191 testis Gene DDX3Y, variant not shown       capped Suspected internal deletion, this clone was ignored    
DC410895 thymus Gene DDX3Y, variant not shown         Suspected internal deletion, this clone was ignored    
DB238567 trachea Gene DDX3Y, variant not shown       capped This clone was ignored    
DB350456 trachea Gene DDX3Y, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m-u, .n-u, .o, .p Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI