To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene DDX17TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
574 representative clones for gene DDX17 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK024985 colon .a 1 to 2486 2 to 2489 exact tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2489/2489
(100 %)
1 diff
(100.0 %id)
AK074224 colon .a 1 to 2486 2 to 2489   available from FLJ, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2489/2489
(100 %)
1 diff
(100.0 %id)
BC000595 Skin, melanotic melanoma. .a 21 to 2486 1 to 2464 exact available from MGC, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2464/2464
(100 %)
2 diff
(100.0 %id)
TI_1948086386   .a 307 to 1291 130 to 1120       991/1260
(78 %)
8 diff
(99.4 %id)
TI_1948086556   .a 307 to 1289 134 to 1122       989/1291
(76 %)
30 diff
(97.7 %id)
TI_1948086732   .a 307 to 1289 134 to 1120   AAA   987/1257
(78 %)
34 diff
(97.3 %id)
TI_1948086906   .a 307 to 1253 133 to 1093       961/1305
(73 %)
43 diff
(96.8 %id)
U59321   .a 308 to 2317 1 to 2010       2010/2010
(100 %)
2 diff
(100.0 %id)
NM_006386.4   .a 358 to 4755 391 to 4788 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 4788/4788
(100 %)
0 diff
(100 %id)
CD622551   .a 1072 to 1836 763 to 1       763/763
(100 %)
7 diff
(99.1 %id)
CD622553   .a 1117 to 1836 718 to 1       718/718
(100 %)
3 diff
(99.6 %id)
CN346046 embryonic stem cells, DMSO-treated H9 cellline .a 1300 to 1968 9 to 677       669/677
(98 %)
0 diff
(100 %id)
TI_1948086387   .a 1392 to 2259 997 to 128       870/1358
(64 %)
13 diff
(99.1 %id)
TI_1948086733   .a 1395 to 2259 993 to 128       864/1397
(61 %)
9 diff
(99.4 %id)
TI_1948086557   .a 1459 to 2259 928 to 127       802/1373
(58 %)
6 diff
(99.6 %id)
TI_1948086907   .a 1516 to 2259 871 to 126       746/1378
(54 %)
14 diff
(99.0 %id)
H70107 liver and spleen .a 1545 to 1847 1 to 302       302/307
(98 %)
2 diff
(99.4 %id)
TI_154110551   .a 1658 to 2485 901 to 79   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 823/940
(87 %)
28 diff
(97.1 %id)
BU533108 mixed (pool of 40 RNAs) .a 1679 to 2284 1 to 609       609/838
(72 %)
10 diff
(98.9 %id)
H69690 liver and spleen .a 2087 to 2485 411 to 9   tiling clone,   403/411
(98 %)
0 diff
(100 %id)
BM803699 leiomyosarcoma, uterus .b 1 to 806 6 to 811   tiling clone,   811/1059
(76 %)
8 diff
(99.3 %id)
DA130635 alzheimer cortex .b 1 to 556 6 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BP228826 brain .b 1 to 583 3 to 585       585/585
(100 %)
0 diff
(100 %id)
BP352643   .b 1 to 590 3 to 592       592/592
(100 %)
0 diff
(100 %id)
BP230081 brain .b 1 to 582 2 to 583       583/583
(100 %)
0 diff
(100 %id)
DA491052 brain .b 1 to 571 3 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BP233067 muscle .b 1 to 583 2 to 584       584/584
(100 %)
0 diff
(100 %id)
DA555115   .b 1 to 566 3 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BP250006 hippocampus .b 1 to 600 2 to 601       601/601
(100 %)
0 diff
(100 %id)
BP278220   .b 1 to 586 2 to 587       587/587
(100 %)
0 diff
(100 %id)
BP278324   .b 1 to 582 2 to 583       583/583
(100 %)
0 diff
(100 %id)
BP284229 bone marrow .b 1 to 588 2 to 589       589/589
(100 %)
0 diff
(100 %id)
DA653593   .b 1 to 530 3 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
BP313846 mammary gland .b 1 to 583 2 to 584       584/584
(100 %)
0 diff
(100 %id)
DA835096 placenta .b 1 to 548 3 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA948127 Spleen .b 1 to 553 3 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
BP351739   .b 1 to 586 2 to 587       587/587
(100 %)
0 diff
(100 %id)
DA020853   .b 1 to 570 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA039776 bladder .b 1 to 560 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA045585 bladder .b 1 to 585 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA162844 amygdala .b 1 to 531 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DA201394 brain .b 1 to 574 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA274771 corpus callosum .b 1 to 515 2 to 516   capped   515/515
(100 %)
0 diff
(100 %id)
DA290635 hippocampus .b 1 to 580 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA373066 thalamus .b 1 to 588 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA437529 tongue, tumor tissue .b 1 to 525 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DA492038 brain .b 1 to 573 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA493318 brain .b 1 to 581 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA497140 brain .b 1 to 571 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA503687 brain .b 1 to 557 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA559042   .b 1 to 563 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA651614   .b 1 to 544 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA705397   .b 1 to 511 2 to 512   capped   511/511
(100 %)
0 diff
(100 %id)
AU133082   .b 1 to 808 2 to 811   capped   810/837
(96 %)
10 diff
(98.9 %id)
DA740861   .b 1 to 505 2 to 506   capped   505/505
(100 %)
0 diff
(100 %id)
DA746587   .b 1 to 562 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA761090 tongue .b 1 to 520 2 to 521   capped   520/520
(100 %)
0 diff
(100 %id)
DA769495 brain .b 1 to 577 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA774791 brain .b 1 to 548 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA782172 brain .b 1 to 565 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA817778   .b 1 to 560 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA819930   .b 1 to 537 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA879719 Prostate .b 1 to 570 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA882271   .b 1 to 549 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA920884 small intestine .b 1 to 563 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA933581 Spleen .b 1 to 571 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA967203 stomach .b 1 to 568 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA967377 stomach .b 1 to 565 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA970669 synovial membrane tissue from rheumatioidarthritis .b 1 to 568 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB015381 esophageal, tumor tissue .b 1 to 550 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB127796 thymus .b 1 to 543 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DB129709 thymus .b 1 to 563 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB204038 trachea .b 1 to 537 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
BQ024683 placenta .b 1 to 357 15 to 371     Submitted on the opposite strand 357/376
(94 %)
3 diff
(99.3 %id)
DA490201 brain .b 2 to 559 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA777655 brain .b 2 to 569 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BP250733 hippocampus .b 3 to 586 1 to 584       584/584
(100 %)
0 diff
(100 %id)
DB264121 uterus .b 3 to 556 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA475926   .b 4 to 576 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB140132 thymus .b 4 to 536 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DA032545   .b 6 to 580 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA786052 brain .b 6 to 588 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
BP229468 brain .b 9 to 593 1 to 585       585/585
(100 %)
0 diff
(100 %id)
BX376155 Neuroblastoma Cot 25-normalized .b 10 to 1074 1 to 1057       1057/1057
(100 %)
28 diff
(97.4 %id)
DN995909 breast cancer, Mammary gland (cancer tissue) .b 13 to 567 1 to 555       555/555
(100 %)
0 diff
(100 %id)
CN346053 embryonic stem cells, DMSO-treated H9 cellline .b 25 to 606 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BU168930 ductal carcinoma, cell line, Pancreas .b 27 to 860 1 to 838       838/918
(91 %)
11 diff
(98.9 %id)
BQ689090 ductal carcinoma, cell line, Pancreas .b 27 to 894 1 to 880       880/912
(96 %)
26 diff
(97.2 %id)
BQ687955 ductal carcinoma, cell line, Pancreas .b 27 to 909 1 to 886       886/889
(99 %)
13 diff
(98.6 %id)
CR983640 T-Lymphocytes .b 40 to 683 1 to 644       644/647
(99 %)
1 diff
(99.9 %id)
BM549305 melanotic melanoma, skin .b 123 to 1043 1 to 925       925/1133
(81 %)
7 diff
(99.4 %id)
TI_154151388   .b 148 to 664 608 to 90     Submitted on the opposite strand 519/530
(97 %)
15 diff
(97.2 %id)
DA476678   .b 203 to 774 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BU174714 ductal carcinoma, cell line, Pancreas .b 237 to 1112 1 to 883       883/993
(88 %)
7 diff
(99.3 %id)
CR456432   .b 278 to 2412 1 to 2135   tiling clone,   2135/2135
(100 %)
1 diff
(100.0 %id)
CU013280 Synthetic constructs .b 300 to 2267 12 to 1979 *653P     1968/1990
(98 %)
4 diff
(99.8 %id)
BP200028 amygdala .b 358 to 552 388 to 582       582/582
(100 %)
0 diff
(100 %id)
DA023770   .b 358 to 527 372 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA502038 brain .b 358 to 544 377 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA592517 lung .b 358 to 525 388 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
NM_001098504.1   .b 358 to 4761 391 to 4794   RefSeq, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 4794/4794
(100 %)
0 diff
(100 %id)
DA790686 brain .b 358 to 484 388 to 514   capped   513/513
(100 %)
0 diff
(100 %id)
DA815658   .b 358 to 549 391 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA884807   .b 358 to 522 388 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
BP332593 renal proximal tubule .b 358 to 563 377 to 582       582/582
(100 %)
0 diff
(100 %id)
BP353248   .b 358 to 550 391 to 583       583/583
(100 %)
0 diff
(100 %id)
BP362936 thalamus .b 358 to 559 381 to 582       582/582
(100 %)
0 diff
(100 %id)
DB129490 thymus .b 358 to 527 378 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
TI_154137167   .b 358 to 664 413 to 720     Submitted on the opposite strand 685/1023
(66 %)
6 diff
(99.5 %id)
BQ223971 embryonal carcinoma, cell line, testis .b 601 to 1507 1 to 910       910/910
(100 %)
11 diff
(98.8 %id)
CA393823 eye, RPE/choroid .b 696 to 1208 1 to 513       513/513
(100 %)
0 diff
(100 %id)
BQ379675 uterus_tumor .b 731 to 1297 1 to 567       567/567
(100 %)
0 diff
(100 %id)
CN346055 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 742 to 1375 7 to 641       635/641
(99 %)
1 diff
(99.9 %id)
BP253152 Kidney .b 752 to 1326 1 to 575       575/575
(100 %)
0 diff
(100 %id)
BJ997575 Wilms tumor .b 772 to 1268 44 to 540     Submitted on the opposite strand 497/540
(92 %)
0 diff
(100 %id)
BM456261 lymph, lymphoma, cell line .b 875 to 1723 1 to 857       857/857
(100 %)
8 diff
(99.1 %id)
BM722522 eye, fetal eye .b 989 to 1514 1 to 526     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 526/526
(100 %)
0 diff
(100 %id)
AA485944   .b 1190 to 1719 1 to 530     Submitted on the opposite strand 530/530
(100 %)
0 diff
(100 %id)
BE698286 uterus_tumor .b 1516 to 1633 118 to 1       118/118
(100 %)
0 diff
(100 %id)
CB852617 Human Lung Epithelial cells, lung .b 1651 to 2321 689 to 19   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 671/671
(100 %)
0 diff
(100 %id)
CU453766 epidermis .b 1725 to 2191 476 to 17     Submitted on the opposite strand 460/505
(91 %)
11 diff
(97.9 %id)
CU453869 epidermis .b 1725 to 2191 476 to 17     Submitted on the opposite strand 460/505
(91 %)
11 diff
(97.9 %id)
CU454894 epidermis .b 1725 to 2249 530 to 13     Submitted on the opposite strand 518/559
(92 %)
11 diff
(98.1 %id)
BM679031 eye, fetal eye .b 1792 to 2492 720 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 702/702
(100 %)
3 diff
(99.6 %id)
AI803453   .b 2223 to 2496 274 to 1   tiling clone,   274/275
(99 %)
0 diff
(100 %id)
AA489555   .b 2253 to 2490 239 to 1     Submitted on the opposite strand 239/239
(100 %)
1 diff
(99.6 %id)
CB215934 normal endometrium, late proliferativephase, cycle day 13, uterus .b 2258 to 2881 1 to 621       621/621
(100 %)
4 diff
(99.4 %id)
AW290899   .b 2368 to 2857 1 to 489   tiling clone, AAA Submitted on the opposite strand 489/489
(100 %)
5 diff
(99.0 %id)
FN148028 breast carcinoma .b 2387 to 2482 94 to 1     Submitted on the opposite strand 94/96
(97 %)
2 diff
(98.0 %id)
DB117216 thymus .b 2598 to 3227 2 to 631   tiling clone, capped   630/630
(100 %)
0 diff
(100 %id)
DB175286 kidney, tumor tissue .b 2604 to 3162 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA073016 cerebellum .b 2621 to 3192 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA590053 lung .b 2644 to 3215 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA588983 lung .b 2645 to 3217 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA874838 Prostate .b 2646 to 3214 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BC045747 Brain, hippocampus .b 2672 to 4758 1 to 2086   available from MGC, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2086/2086
(100 %)
5 diff
(99.8 %id)
CR620697 fetal liver .b 2684 to 4763 1 to 2080   tiling clone,   2080/2080
(100 %)
0 diff
(100 %id)
DA071177 cerebellum .b 2695 to 3243 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BM720174 eye, fetal eye .b 2695 to 3165 1 to 471     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 471/471
(100 %)
2 diff
(99.6 %id)
CN345115 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 2700 to 3322 1 to 623       623/623
(100 %)
0 diff
(100 %id)
BQ212124 embryonal carcinoma, cell line, testis .b 2701 to 3549 1 to 850       850/850
(100 %)
3 diff
(99.7 %id)
CN345148 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 2702 to 3312 1 to 611       611/611
(100 %)
0 diff
(100 %id)
BP425506 small intestine .b 2703 to 3205 1 to 503     Submitted on the opposite strand 503/503
(100 %)
0 diff
(100 %id)
BM472585 embryonal carcinoma, cell line, testis .b 2703 to 3636 1 to 946       946/975
(97 %)
27 diff
(97.3 %id)
CN345122 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 2712 to 3355 1 to 644       644/644
(100 %)
1 diff
(99.9 %id)
CB269192 adipose .b 2723 to 3447 1 to 725       725/726
(99 %)
7 diff
(99.1 %id)
DB170494 kidney, tumor tissue .b 2726 to 3321 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA581140 lung .b 2770 to 3327 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
CB113304 Liver .b 2780 to 3385 1 to 606       606/606
(100 %)
0 diff
(100 %id)
BM799781 eye, retinoblastoma .b 2784 to 3794 1 to 1019       1019/1106
(92 %)
26 diff
(97.7 %id)
DA623698 Kidney .b 2787 to 3326 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA170097 amygdala .b 2790 to 3345 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
CN345140 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 2813 to 3423 1 to 611       611/611
(100 %)
0 diff
(100 %id)
DA529176 brain .b 2838 to 3446 2 to 610   capped   609/609
(100 %)
0 diff
(100 %id)
BE673674 carcinoid, lung .b 2881 to 3426 1 to 546     Submitted on the opposite strand 546/546
(100 %)
0 diff
(100 %id)
BE644728 carcinoid, lung .b 2881 to 3440 1 to 560     Submitted on the opposite strand 560/560
(100 %)
0 diff
(100 %id)
BE670466 carcinoid, lung .b 2881 to 3394 1 to 514     Submitted on the opposite strand 514/514
(100 %)
0 diff
(100 %id)
DA252714 caudate nucleus .b 2893 to 3476 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
CR979186 T-Lymphocytes .b 2901 to 3698 1 to 798       798/839
(95 %)
3 diff
(99.7 %id)
BJ992560 hepatoblastoma .b 2920 to 3429 1 to 510       510/510
(100 %)
0 diff
(100 %id)
DA063190 cerebellum .b 2923 to 3480 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA071196 cerebellum .b 2931 to 3489 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA907068   .b 2973 to 3493 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
BM721980 eye, fetal eye .b 3002 to 3657 1 to 656     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 656/656
(100 %)
1 diff
(99.9 %id)
AL080113 uterus .b 3097 to 4761 1 to 1665   available from DKFZ, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 1665/1665
(100 %)
1 diff
(100.0 %id)
CR591397 Neuroblastoma Cot 10-normalized .b 3262 to 4730 1 to 1469       1469/1469
(100 %)
0 diff
(100 %id)
CR625919 fetal brain .b 3352 to 4758 1 to 1407       1407/1407
(100 %)
0 diff
(100 %id)
BX410721 brain, fetal brain .b 3362 to 4199 10 to 843       834/843
(98 %)
0 diff
(100 %id)
BX419300 brain, fetal brain .b 3362 to 4373 10 to 1021       1012/1021
(99 %)
0 diff
(100 %id)
BX347592 Neuroblastoma Cot 25-normalized .b 3483 to 3996 513 to 1       513/579
(88 %)
14 diff
(97.6 %id)
CR594526 fetal brain .b 3512 to 4786 1 to 1275       1275/1275
(100 %)
0 diff
(100 %id)
BX419853 brain, fetal brain .b 3512 to 4334 1 to 821       821/821
(100 %)
4 diff
(99.6 %id)
BX432534 brain, fetal brain .b 3513 to 4423 1 to 909       909/909
(100 %)
0 diff
(100 %id)
BX432535 brain, fetal brain .b 3513 to 4330 1 to 816       816/846
(96 %)
35 diff
(95.9 %id)
DA728273   .b 3527 to 4250 2 to 735   capped   734/755
(97 %)
15 diff
(98.1 %id)
CD515541 White Matter .b 3529 to 4355 1 to 832       832/871
(95 %)
11 diff
(98.8 %id)
N31162 melanocyte .b 3574 to 3951 1 to 379   fully sequenced,   379/379
(100 %)
0 diff
(100 %id)
CR608668 fetal brain .b 3607 to 4736 1 to 1130       1130/1130
(100 %)
0 diff
(100 %id)
BU193326 eye, retinoblastoma .b 3607 to 4429 1 to 824       824/824
(100 %)
2 diff
(99.8 %id)
BM831270 stomach .b 3673 to 4232 1 to 560       560/560
(100 %)
0 diff
(100 %id)
BM831375 stomach .b 3673 to 4256 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BM833275 stomach .b 3673 to 4315 1 to 643       643/643
(100 %)
0 diff
(100 %id)
DT221027 brain .b 3680 to 4283 1 to 604       604/604
(100 %)
0 diff
(100 %id)
BX376154 Neuroblastoma Cot 25-normalized .b 3690 to 4724 1030 to 4       1027/1040
(98 %)
0 diff
(100 %id)
BX410722 brain, fetal brain .b 3706 to 4136 353 to 780       702/854
(82 %)
36 diff
(95.8 %id)
CN345118 embryonic stem cells, cell lines H1, H7, andH9 .b 3758 to 4488 1 to 732       732/732
(100 %)
2 diff
(99.8 %id)
CA843761 Pancreas, Purified pancreatic islet .b 3765 to 4284 1 to 520   fully sequenced,   520/520
(100 %)
0 diff
(100 %id)
AA125862 uterus .b 3801 to 4251 1 to 452       452/452
(100 %)
1 diff
(99.8 %id)
BG400754 Kidney .b 3804 to 4508 1 to 701       701/701
(100 %)
6 diff
(99.2 %id)
BX410720 brain, fetal brain .b 3838 to 4710 873 to 1       873/873
(100 %)
13 diff
(98.6 %id)
BX413123 brain, fetal brain .b 3877 to 4760 895 to 1       895/895
(100 %)
39 diff
(95.7 %id)
CA867856 Pancreas, Purified pancreatic islet .b 3905 to 4322 1 to 418   fully sequenced,   418/418
(100 %)
0 diff
(100 %id)
CN345137 embryonic stem cells, DMSO-treated H9 cellline .b 3918 to 4542 1 to 625       625/625
(100 %)
0 diff
(100 %id)
N22684 melanocyte .b 3921 to 4272 350 to 1   fully sequenced,   350/350
(100 %)
0 diff
(100 %id)
TI_149300733   .b 3925 to 4761 908 to 85   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 824/950
(86 %)
15 diff
(98.5 %id)
BQ636875 eye, retina .b 3943 to 4512 1 to 570       570/570
(100 %)
0 diff
(100 %id)
TI_154108382   .b 3974 to 4761 862 to 84   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 779/927
(84 %)
10 diff
(99.0 %id)
CA447594 Chondrosarcoma, Left Pelvis .b 3974 to 4761 792 to 14   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 779/787
(98 %)
10 diff
(98.8 %id)
BQ015073 Chondrosarcoma, Left Pubic Bone .b 3987 to 4761 786 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 768/786
(97 %)
9 diff
(98.9 %id)
TI_154051019   .b 3987 to 4761 859 to 90   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 770/966
(79 %)
11 diff
(98.9 %id)
TI_154103916   .b 4008 to 4761 832 to 90   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 743/915
(81 %)
10 diff
(99.0 %id)
BM678606 eye, fetal eye .b 4029 to 4758 745 to 17   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 729/730
(99 %)
1 diff
(99.9 %id)
BM976741 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 4039 to 4761 737 to 16   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 722/722
(100 %)
1 diff
(99.9 %id)
BQ008710 Chondrosarcoma, Left Pelvis .b 4045 to 4761 730 to 16   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 715/720
(99 %)
2 diff
(99.8 %id)
TI_154025823   .b 4056 to 4758 779 to 78   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 702/713
(98 %)
2 diff
(99.8 %id)
BM767168 stomach .b 4062 to 4731 1 to 670       670/670
(100 %)
0 diff
(100 %id)
BM678495 eye, fetal eye .b 4063 to 4761 713 to 16   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 698/698
(100 %)
3 diff
(99.6 %id)
BQ007734 Chondrosarcoma, Left Pelvis .b 4080 to 4761 693 to 14   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 680/680
(100 %)
5 diff
(99.3 %id)
TI_149294452   .b 4083 to 4758 750 to 77   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 674/804
(83 %)
13 diff
(98.4 %id)
CA440072 lung, Metastatic Chondrosarcoma .b 4091 to 4758 684 to 17   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 668/668
(100 %)
1 diff
(99.9 %id)
BM671936 eye, fetal eye .b 4098 to 4761 677 to 14   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 664/664
(100 %)
0 diff
(100 %id)
BU631129 cell lines, Chondrosarcoma .b 4103 to 4758 672 to 17   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 656/656
(100 %)
1 diff
(99.9 %id)
CA414256 Chondrosarcoma Grade II, Left Pelvis .b 4107 to 4761 674 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 656/656
(100 %)
1 diff
(99.9 %id)
BE714363 head_neck .b 4112 to 4433 1 to 321       321/321
(100 %)
4 diff
(98.8 %id)
BE835491 prostate_normal .b 4112 to 4433 1 to 322       322/322
(100 %)
1 diff
(99.7 %id)
CA446103 Chondrosarcoma, Left Pelvis .b 4116 to 4761 661 to 16   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 646/651
(99 %)
0 diff
(100 %id)
AA884548   .b 4127 to 4666 1 to 540     Submitted on the opposite strand 540/540
(100 %)
0 diff
(100 %id)
AA486008   .b 4131 to 4427 1 to 297   fully sequenced,   297/297
(100 %)
0 diff
(100 %id)
BU683213 lung .b 4168 to 4758 607 to 17   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 591/591
(100 %)
0 diff
(100 %id)
BI495239 cochlea, ear .b 4171 to 4761 632 to 42   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 591/591
(100 %)
0 diff
(100 %id)
BX409537 brain, fetal brain .b 4187 to 4762 1 to 579       579/579
(100 %)
9 diff
(98.5 %id)
BJ992561 hepatoblastoma .b 4189 to 4728 540 to 1       540/540
(100 %)
0 diff
(100 %id)
BX409535 brain, fetal brain .b 4206 to 4759 1 to 552       552/554
(99 %)
6 diff
(99.0 %id)
BX430602 brain, fetal brain .b 4209 to 4758 1 to 549       549/549
(100 %)
8 diff
(98.6 %id)
BE858382 brain, glioblastoma (pooled) .b 4219 to 4758 540 to 1       540/540
(100 %)
0 diff
(100 %id)
AW571511 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 4229 to 4761 533 to 1       533/533
(100 %)
0 diff
(100 %id)
AW268348 lung, two pooled squamous cell carcinomas .b 4231 to 4762 532 to 1       532/532
(100 %)
0 diff
(100 %id)
CA843511 Pancreas, Purified pancreatic islet .b 4254 to 4761 508 to 1   fully sequenced,   508/508
(100 %)
0 diff
(100 %id)
AW778884 colon, moderately-differentiated adenocarcinoma .b 4259 to 4761 503 to 1       503/503
(100 %)
0 diff
(100 %id)
AI334081 lung .b 4260 to 4763 504 to 1       504/504
(100 %)
0 diff
(100 %id)
AI921257 adenocarcinoma, Pancreas .b 4260 to 4762 503 to 1       503/503
(100 %)
0 diff
(100 %id)
AI478720 colon, moderately-differentiated adenocarcinoma .b 4261 to 4762 502 to 1       502/502
(100 %)
0 diff
(100 %id)
CA943588 Pancreas, Purified pancreatic islet .b 4292 to 4760 469 to 1   fully sequenced,   469/469
(100 %)
0 diff
(100 %id)
W80606 heart .b 4312 to 4752 1 to 442   fully sequenced,   442/442
(100 %)
4 diff
(99.1 %id)
AA436122   .b 4313 to 4756 1 to 445   fully sequenced, Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 445/445
(100 %)
1 diff
(99.8 %id)
W68471 heart .b 4316 to 4757 1 to 442   fully sequenced,   442/442
(100 %)
3 diff
(99.4 %id)
AA125863 uterus .b 4333 to 4761 429 to 1       429/429
(100 %)
0 diff
(100 %id)
R74457 placenta .b 4370 to 4738 374 to 1       374/397
(94 %)
7 diff
(98.3 %id)
BM703431 eye, human retina .b 4390 to 4761 1 to 372   fully sequenced, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 372/372
(100 %)
1 diff
(99.8 %id)
AA488628   .b 4397 to 4761 365 to 1   fully sequenced,   365/365
(100 %)
0 diff
(100 %id)
W68144 heart .b 4450 to 4762 315 to 1   fully sequenced,   315/315
(100 %)
0 diff
(100 %id)
AA436016   .b 4510 to 4761 265 to 14   fully sequenced, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 252/252
(100 %)
0 diff
(100 %id)
BU729362 eye, human retina .b 4609 to 4761 168 to 16   fully sequenced, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 153/153
(100 %)
0 diff
(100 %id)
W80607 heart .b 4611 to 4761 152 to 1   fully sequenced,   152/152
(100 %)
0 diff
(100 %id)
AI357571 brain, glioblastoma (pooled) .b 4756 to 5272 1 to 517     Submitted on the opposite strand 517/517
(100 %)
0 diff
(100 %id)
BE855615 brain, glioblastoma (pooled) .b 4756 to 5300 1 to 545   tiling clone, Submitted on the opposite strand 545/545
(100 %)
0 diff
(100 %id)
BX417605 placenta .b 4786 to 5707 1 to 922   tiling clone, Submitted on the opposite strand 922/922
(100 %)
5 diff
(99.5 %id)
AL713763 amygdala .c 1 to 6442 1 to 6439 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 6439/6439
(100 %)
5 diff
(100.0 %id)
AA044183 uterus .c 17 to 569 1 to 552       552/553
(99 %)
10 diff
(98.2 %id)
AU116941 whole embryo, mainly head .c 564 to 1315 2 to 757   capped   756/756
(100 %)
5 diff
(99.4 %id)
BG764430 melanotic melanoma, high MDR (cell line), skin .c 700 to 1540 1 to 844       844/844
(100 %)
12 diff
(98.6 %id)
BQ446579 Knee, Osteoarthritic Cartilage .c 875 to 1620 756 to 17   AAA   740/743
(99 %)
8 diff
(99.0 %id)
CA952723 Pancreas, Purified pancreatic islet .c 892 to 1302 1 to 411   fully sequenced,   411/411
(100 %)
2 diff
(99.6 %id)
N28449 melanocyte .c 898 to 1384 1 to 495       495/584
(84 %)
8 diff
(98.7 %id)
BQ446633 Knee, Osteoarthritic Cartilage .c 957 to 1625 686 to 19   AAA   668/668
(100 %)
1 diff
(99.9 %id)
CA952654 Pancreas, Purified pancreatic islet .c 976 to 1302 1 to 327   fully sequenced,   327/327
(100 %)
0 diff
(100 %id)
N44240 melanocyte .c 987 to 1164 1 to 179       179/182
(98 %)
3 diff
(98.4 %id)
CN404888 embryonic stem cells, cell lines H1, H7, andH9 .c 1007 to 1604 598 to 1     Submitted on the opposite strand 598/598
(100 %)
0 diff
(100 %id)
AI910854 pooled .c 1018 to 1624 606 to 1       606/606
(100 %)
2 diff
(99.7 %id)
AI807225 pooled .c 1018 to 1624 607 to 1       607/607
(100 %)
2 diff
(99.7 %id)
AW188131 pooled .c 1018 to 1624 607 to 1       607/607
(100 %)
1 diff
(99.9 %id)
AI972657 Prostate .c 1033 to 1625 594 to 1       594/594
(100 %)
3 diff
(99.5 %id)
BP250243 hippocampus .c 1037 to 1618 1 to 582       582/582
(100 %)
0 diff
(100 %id)
H96686 melanocyte .c 1059 to 1273 1 to 217       217/230
(94 %)
4 diff
(98.3 %id)
BG654584 Pancreas, Purified pancreatic islet .c 1102 to 1620 523 to 6     Submitted on the opposite strand 518/523
(99 %)
0 diff
(100 %id)
BQ011937 placenta .c 1107 to 1625 537 to 19   AAA   519/519
(100 %)
0 diff
(100 %id)
BQ011677 placenta .c 1110 to 1625 534 to 19   AAA   516/516
(100 %)
0 diff
(100 %id)
AA044072 uterus .c 1147 to 1625 483 to 1       483/483
(100 %)
12 diff
(97.6 %id)
AA358476 lung .c 1202 to 1529 1 to 329       329/334
(98 %)
2 diff
(99.5 %id)
AI332565 lung .c 1208 to 1670 513 to 52       462/513
(90 %)
8 diff
(98.5 %id)
BF941676 Prostate .c 1213 to 1625 413 to 1       413/416
(99 %)
4 diff
(99.1 %id)
AA923039 Kidney .c 1214 to 1625 412 to 1       412/412
(100 %)
0 diff
(100 %id)
AI870973 anaplastic oligodendroglioma, brain .c 1228 to 1625 398 to 1       398/398
(100 %)
0 diff
(100 %id)
AI540097 B-cell, chronic lymphotic leukemia .c 1234 to 1620 393 to 7       387/393
(98 %)
1 diff
(99.8 %id)
CA952404 Pancreas, Purified pancreatic islet .c 1241 to 1625 385 to 1   fully sequenced,   385/385
(100 %)
1 diff
(99.8 %id)
CA952476 Pancreas, Purified pancreatic islet .c 1241 to 1623 383 to 1   fully sequenced,   383/383
(100 %)
0 diff
(100 %id)
BX486382   .c 1245 to 1650 1 to 406       406/406
(100 %)
0 diff
(100 %id)
AI378066 B-cell, chronic lymphotic leukemia .c 1246 to 1615 370 to 1       370/370
(100 %)
5 diff
(98.7 %id)
AI027154 parathyroid gland, parathyroid tumor .c 1282 to 1669 419 to 34       386/419
(92 %)
8 diff
(98.1 %id)
H62681 liver and spleen .c 1300 to 1721 1 to 421       421/421
(100 %)
5 diff
(98.9 %id)
R02509 liver and spleen .c 1306 to 1715 1 to 410       410/416
(98 %)
5 diff
(98.8 %id)
R02510 liver and spleen .c 1306 to 1691 1 to 388       388/388
(100 %)
4 diff
(99.0 %id)
W01164 liver and spleen .c 1307 to 1649 1 to 347       347/347
(100 %)
4 diff
(98.9 %id)
R94376 liver and spleen .c 1310 to 1629 1 to 323       323/323
(100 %)
3 diff
(99.1 %id)
H47426 liver and spleen .c 1311 to 1724 1 to 413       413/414
(99 %)
2 diff
(99.6 %id)
R94367 liver and spleen .c 1311 to 1683 1 to 375       375/375
(100 %)
2 diff
(99.5 %id)
BF174964 blood .c 1326 to 1692 1 to 366       366/369
(99 %)
3 diff
(99.2 %id)
AA808586 germinal center B cell .c 1327 to 1565 239 to 1       239/239
(100 %)
2 diff
(99.2 %id)
N77335 liver and spleen .c 1337 to 1755 12 to 428       417/429
(97 %)
16 diff
(96.3 %id)
BG231237 nasopharynx, normal epithelium .c 1338 to 1540 1 to 203       203/203
(100 %)
4 diff
(98.1 %id)
BG272736 nasopharynx, normal epithelium .c 1338 to 1697 1 to 360       360/367
(98 %)
5 diff
(98.7 %id)
AW241664 Kidney .c 1348 to 1625 278 to 1       278/278
(100 %)
0 diff
(100 %id)
H37935 eye, retina .c 1404 to 1880 1 to 481       481/483
(99 %)
6 diff
(98.8 %id)
H80184 liver and spleen .c 1417 to 1822 1 to 412       412/415
(99 %)
11 diff
(97.4 %id)
DW453986 Liver .c 1418 to 1585 17 to 184       168/184
(91 %)
1 diff
(99.5 %id)
DB354623 whole embryo, mainly head .c 1653 to 2217 566 to 1       566/566
(100 %)
7 diff
(98.8 %id)
BF061070 fibrotheoma, ovary .c 1717 to 2270 1 to 554     Submitted on the opposite strand 554/554
(100 %)
1 diff
(99.9 %id)
N35999 melanocyte .c 1760 to 2217 469 to 1       469/474
(98 %)
16 diff
(96.7 %id)
AA805057 germinal center B cell .c 1770 to 2226 457 to 1       457/457
(100 %)
0 diff
(100 %id)
H99687 melanocyte .c 1787 to 2217 433 to 1       433/448
(96 %)
2 diff
(99.6 %id)
AA743296 germinal center B cell .c 1792 to 2226 435 to 1       435/435
(100 %)
0 diff
(100 %id)
N55330 liver and spleen .c 1799 to 2208 410 to 1       410/410
(100 %)
0 diff
(100 %id)
AA769329 germinal center B cell .c 1863 to 2226 364 to 1       364/364
(100 %)
0 diff
(100 %id)
H78808 liver and spleen .c 1896 to 2207 319 to 1       319/319
(100 %)
8 diff
(97.5 %id)
H96560 melanocyte .c 1914 to 2218 309 to 1       309/309
(100 %)
7 diff
(97.8 %id)
R02397 liver and spleen .c 1986 to 2219 235 to 1       235/235
(100 %)
1 diff
(99.6 %id)
R02398 liver and spleen .c 1994 to 2215 234 to 6       229/238
(96 %)
0 diff
(100 %id)
BI056179 placenta_normal .c 2063 to 2446 389 to 4       386/389
(99 %)
0 diff
(100 %id)
BX503942   .c 2227 to 2854 39 to 666       628/666
(94 %)
0 diff
(100 %id)
BG910564 anaplastic oligodendroglioma with 1p/19qloss, brain .c 2286 to 2418 558 to 702       644/803
(80 %)
44 diff
(94.6 %id)
DB144883 thymus .c 2319 to 2853 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
BQ015306 Chondrosarcoma, Left Pubic Bone .c 2330 to 2864 746 to 212   tiling clone, AAA   535/728
(73 %)
0 diff
(100 %id)
BF801484 colon_ins .c 2392 to 2905 522 to 6     Submitted on the opposite strand 517/522
(99 %)
0 diff
(100 %id)
BF742661 breast .c 2403 to 2718 14 to 326       313/326
(96 %)
0 diff
(100 %id)
BF742665 breast .c 2403 to 2787 24 to 411       388/412
(94 %)
19 diff
(95.4 %id)
BI030426 marrow .c 2432 to 2868 436 to 1       436/446
(97 %)
7 diff
(98.5 %id)
BF801479 colon_ins .c 2445 to 2947 504 to 2     Submitted on the opposite strand 503/504
(99 %)
0 diff
(100 %id)
BQ321665 colon .c 2456 to 2833 379 to 2       378/379
(99 %)
0 diff
(100 %id)
BE770391 prostate_tumor .c 2521 to 2864 1 to 343       343/343
(100 %)
9 diff
(97.4 %id)
BF801474 colon_ins .c 2570 to 2936 376 to 1     Submitted on the opposite strand 376/376
(100 %)
22 diff
(94.2 %id)
BQ712274 Spleen .c 2606 to 3534 17 to 949       933/949
(98 %)
15 diff
(98.5 %id)
BE834534 prostate_normal .c 2642 to 3198 26 to 582       557/582
(95 %)
0 diff
(100 %id)
BX503045 Liver .c 2720 to 3159 1 to 441       441/441
(100 %)
2 diff
(99.6 %id)
AL049056 testis .c 2761 to 3219 1 to 460       460/460
(100 %)
17 diff
(96.4 %id)
AL049067 testis .c 2761 to 3199 1 to 439       439/439
(100 %)
5 diff
(98.9 %id)
DA237986 brain .c 2801 to 3393 2 to 596   capped   595/595
(100 %)
2 diff
(99.7 %id)
BE825908 lung_normal .c 2838 to 2967 1 to 132       132/140
(94 %)
4 diff
(97.2 %id)
BE844224 testis_normal .c 2879 to 3094 223 to 10       214/228
(93 %)
0 diff
(100 %id)
DB284601 uterus .c 2926 to 3466 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
BE503943 carcinoid, lung .c 2937 to 3268 1 to 332     Submitted on the opposite strand 332/332
(100 %)
0 diff
(100 %id)
AV721584 hypothalamus .c 2953 to 3393 1 to 432       432/432
(100 %)
7 diff
(98.4 %id)
BM126514 Islets of Langerhans, Pancreas .c 2987 to 3427 1 to 441       441/441
(100 %)
6 diff
(98.7 %id)
AW867889 stomach_normal .c 3009 to 3675 662 to 1       662/679
(97 %)
13 diff
(98.1 %id)
BF090110 nervous_normal .c 3023 to 3345 11 to 328       318/328
(96 %)
0 diff
(100 %id)
BF960949 nervous_normal .c 3023 to 3578 1 to 556       556/557
(99 %)
29 diff
(94.8 %id)
BF959447 nervous_normal .c 3029 to 3571 557 to 15       543/559
(97 %)
0 diff
(100 %id)
BE175397 head_neck .c 3035 to 3671 20 to 655       636/655
(97 %)
0 diff
(100 %id)
BF963500 nervous_normal .c 3035 to 3276 10 to 251       242/251
(96 %)
0 diff
(100 %id)
BF942851 nervous_normal .c 3036 to 3484 11 to 461       451/461
(97 %)
0 diff
(100 %id)
BF962358 nervous_normal .c 3036 to 3687 654 to 4       651/656
(99 %)
0 diff
(100 %id)
BQ343169 nervous_normal .c 3036 to 3571 534 to 1       534/535
(99 %)
5 diff
(99.1 %id)
BQ343178 nervous_normal .c 3036 to 3591 7 to 561       555/562
(98 %)
6 diff
(99.0 %id)
BI033811 nervous_normal .c 3037 to 3621 1 to 583       583/584
(99 %)
9 diff
(98.5 %id)
BI035328 nervous_normal .c 3037 to 3448 1 to 412       412/412
(100 %)
5 diff
(98.8 %id)
BI035446 nervous_normal .c 3037 to 3561 1 to 527       527/528
(99 %)
6 diff
(98.9 %id)
BQ343144 nervous_normal .c 3037 to 3557 1 to 528       528/528
(100 %)
34 diff
(93.6 %id)
BF958559 nervous_normal .c 3038 to 3385 1 to 346       346/346
(100 %)
2 diff
(99.5 %id)
BF960830 nervous_normal .c 3038 to 3290 252 to 1       252/252
(100 %)
2 diff
(99.3 %id)
BI034903 nervous_normal .c 3038 to 3580 1 to 537       537/537
(100 %)
10 diff
(98.2 %id)
BI034947 nervous_normal .c 3038 to 3581 1 to 545       545/545
(100 %)
9 diff
(98.4 %id)
BI035390 nervous_normal .c 3038 to 3559 1 to 524       524/524
(100 %)
9 diff
(98.3 %id)
BI035493 nervous_normal .c 3038 to 3396 1 to 356       356/357
(99 %)
9 diff
(97.5 %id)
BI035593 nervous_normal .c 3038 to 3645 1 to 608       608/608
(100 %)
4 diff
(99.4 %id)
BI035596 nervous_normal .c 3038 to 3571 535 to 1       535/535
(100 %)
6 diff
(98.9 %id)
BQ343091 nervous_normal .c 3038 to 3198 159 to 1       159/159
(100 %)
4 diff
(97.5 %id)
BQ343107 nervous_normal .c 3038 to 3571 1 to 534       534/534
(100 %)
11 diff
(98.0 %id)
BQ343143 nervous_normal .c 3038 to 3315 1 to 277       277/277
(100 %)
4 diff
(98.6 %id)
BQ343158 nervous_normal .c 3038 to 3567 1 to 532       532/532
(100 %)
19 diff
(96.5 %id)
BQ343181 nervous_normal .c 3038 to 3570 1 to 533       533/533
(100 %)
7 diff
(98.7 %id)
BF089991 nervous_normal .c 3039 to 3591 1 to 549       549/549
(100 %)
18 diff
(96.8 %id)
BI033912 nervous_normal .c 3039 to 3577 1 to 539       539/539
(100 %)
5 diff
(99.1 %id)
BI035218 nervous_normal .c 3039 to 3541 1 to 501       501/501
(100 %)
12 diff
(97.7 %id)
BQ343189 nervous_normal .c 3052 to 3571 521 to 1       521/525
(99 %)
8 diff
(98.5 %id)
BQ343197 nervous_normal .c 3052 to 3571 521 to 1       521/533
(97 %)
9 diff
(98.4 %id)
BX100496 liver and spleen .c 3055 to 3745 696 to 7     Submitted on the opposite strand 690/699
(98 %)
0 diff
(100 %id)
R09377 liver and spleen .c 3058 to 3350 1 to 293     Submitted on the opposite strand 293/294
(99 %)
3 diff
(99.0 %id)
BE935890 nervous_normal .c 3059 to 3571 523 to 10       514/523
(98 %)
0 diff
(100 %id)
R08432 liver and spleen .c 3059 to 3377 1 to 322     Submitted on the opposite strand 322/356
(90 %)
3 diff
(99.2 %id)
BQ343127 nervous_normal .c 3060 to 3536 27 to 504       478/506
(94 %)
20 diff
(96.1 %id)
T77731 liver and spleen .c 3060 to 3428 1 to 372     Submitted on the opposite strand 372/372
(100 %)
4 diff
(99.0 %id)
BF954307 nervous_normal .c 3063 to 3571 525 to 16       510/525
(97 %)
0 diff
(100 %id)
BI034948 nervous_normal .c 3074 to 3568 497 to 3       495/497
(99 %)
0 diff
(100 %id)
BF962092 nervous_normal .c 3076 to 3429 26 to 383       358/383
(93 %)
0 diff
(100 %id)
BF961888 nervous_normal .c 3085 to 3506 1 to 421       421/421
(100 %)
2 diff
(99.6 %id)
DA018609   .c 3087 to 3645 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
BF956335 nervous_normal .c 3091 to 3504 1 to 414       414/414
(100 %)
0 diff
(100 %id)
BF513649   .c 3103 to 3521 2 to 420     Submitted on the opposite strand 419/430
(97 %)
3 diff
(99.4 %id)
BF961617 nervous_normal .c 3107 to 3220 1 to 115       115/115
(100 %)
4 diff
(96.6 %id)
BQ343042 nervous_normal .c 3130 to 3694 590 to 20       571/592
(96 %)
0 diff
(100 %id)
DB160107 thymus .c 3142 to 3734 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA094360 cerebellum .c 3143 to 3576 2 to 435   capped   434/434
(100 %)
2 diff
(99.6 %id)
BF962940 nervous_normal .c 3144 to 3248 1 to 105       105/105
(100 %)
2 diff
(98.1 %id)
BF362246 nervous_normal .c 3158 to 3585 14 to 441       428/441
(97 %)
0 diff
(100 %id)
DB194965 trachea .c 3174 to 3673 2 to 501   capped   500/500
(100 %)
0 diff
(100 %id)
BQ343155 nervous_normal .c 3176 to 3709 534 to 1       534/534
(100 %)
3 diff
(99.5 %id)
BQ343098 nervous_normal .c 3177 to 3728 555 to 4       552/555
(99 %)
0 diff
(100 %id)
BE935864 nervous_normal .c 3186 to 3707 525 to 2       524/525
(99 %)
0 diff
(100 %id)
BI034908 nervous_normal .c 3197 to 3728 536 to 4       533/536
(99 %)
0 diff
(100 %id)
BQ343129 nervous_normal .c 3202 to 3728 523 to 4       520/527
(98 %)
0 diff
(100 %id)
BQ343063 nervous_normal .c 3203 to 3583 559 to 177       383/559
(68 %)
0 diff
(100 %id)
BQ343194 nervous_normal .c 3209 to 3732 524 to 1       524/524
(100 %)
1 diff
(99.9 %id)
BF960603 nervous_normal .c 3222 to 3402 202 to 22       181/202
(89 %)
0 diff
(100 %id)
BI035383 nervous_normal .c 3229 to 3715 492 to 2       491/496
(98 %)
0 diff
(100 %id)
AA507288 Prostate .c 3240 to 3524 7 to 291       285/295
(96 %)
4 diff
(98.7 %id)
BF812139 colon_ins .c 3242 to 3728 515 to 30     Submitted on the opposite strand 486/515
(94 %)
0 diff
(100 %id)
BE935850 nervous_normal .c 3247 to 3706 466 to 2       465/466
(99 %)
0 diff
(100 %id)
BI035325 nervous_normal .c 3249 to 3745 555 to 59       497/556
(89 %)
0 diff
(100 %id)
EH339227   .c 3251 to 3306 1 to 56       56/56
(100 %)
0 diff
(100 %id)
BF089819 marrow .c 3252 to 3520 1 to 268       268/277
(96 %)
3 diff
(99.0 %id)
BF954185 nervous_normal .c 3253 to 3585 347 to 14       334/347
(96 %)
0 diff
(100 %id)
BQ343010 nervous_normal .c 3262 to 3807 574 to 27       548/574
(95 %)
0 diff
(100 %id)
BQ343083 nervous_normal .c 3263 to 3799 542 to 3       540/543
(99 %)
0 diff
(100 %id)
BF953970 nervous_normal .c 3266 to 3741 481 to 6       476/481
(98 %)
3 diff
(99.4 %id)
BI035545 nervous_normal .c 3269 to 3571 303 to 1       303/303
(100 %)
0 diff
(100 %id)
BQ343009 nervous_normal .c 3270 to 3805 555 to 21       535/555
(96 %)
0 diff
(100 %id)
BQ333005 lung_tumor .c 3274 to 3861 594 to 6       589/594
(99 %)
0 diff
(100 %id)
BF155111 breast .c 3281 to 3727 14 to 460       447/461
(96 %)
6 diff
(98.7 %id)
BF962830 nervous_normal .c 3282 to 3745 463 to 1       463/463
(100 %)
2 diff
(99.6 %id)
BQ343184 nervous_normal .c 3285 to 3742 458 to 2       457/458
(99 %)
0 diff
(100 %id)
BE697904 colon .c 3298 to 3775 481 to 4       478/481
(99 %)
0 diff
(100 %id)
BQ343139 nervous_normal .c 3298 to 3745 451 to 3       449/465
(96 %)
0 diff
(100 %id)
BQ343140 nervous_normal .c 3298 to 3745 448 to 1       448/448
(100 %)
11 diff
(97.6 %id)
AW999318 breast_normal .c 3306 to 3611 309 to 4     Submitted on the opposite strand 306/309
(99 %)
0 diff
(100 %id)
BE000250 breast_normal .c 3306 to 3616 330 to 20     Submitted on the opposite strand 311/330
(94 %)
0 diff
(100 %id)
BF512090   .c 3309 to 3784 493 to 18   AAA   476/476
(100 %)
0 diff
(100 %id)
BF961619 nervous_normal .c 3311 to 3734 433 to 13       421/433
(97 %)
0 diff
(100 %id)
BF960229 nervous_normal .c 3330 to 3731 408 to 7       402/408
(98 %)
0 diff
(100 %id)
BQ343086 nervous_normal .c 3333 to 3746 495 to 84       412/495
(83 %)
20 diff
(96.0 %id)
BQ343138 nervous_normal .c 3335 to 3757 492 to 70       423/492
(85 %)
0 diff
(100 %id)
BF954308 nervous_normal .c 3340 to 3534 1 to 195       195/195
(100 %)
3 diff
(98.5 %id)
R09376 liver and spleen .c 3355 to 3692 343 to 1     Submitted on the opposite strand 343/381
(90 %)
10 diff
(97.4 %id)
R08431 liver and spleen .c 3405 to 3745 373 to 19     Submitted on the opposite strand 355/421
(84 %)
0 diff
(100 %id)
BI037482 nervous_tumor .c 3410 to 3861 502 to 49       454/520
(87 %)
20 diff
(96.2 %id)
M78310   .c 3423 to 3717 295 to 1       295/295
(100 %)
0 diff
(100 %id)
BF962725 nervous_normal .c 3425 to 3792 1 to 368       368/368
(100 %)
4 diff
(99.0 %id)
BQ343173 nervous_normal .c 3431 to 3568 140 to 3       138/140
(98 %)
0 diff
(100 %id)
AI057056 liver and spleen .c 3438 to 3745 310 to 2       309/310
(99 %)
0 diff
(100 %id)
BF962933 nervous_normal .c 3453 to 3745 292 to 1       292/292
(100 %)
1 diff
(99.7 %id)
BQ343152 nervous_normal .c 3462 to 3715 254 to 1       254/254
(100 %)
4 diff
(98.5 %id)
BQ343136 nervous_normal .c 3470 to 3715 246 to 1       246/246
(100 %)
4 diff
(98.4 %id)
BF958699 nervous_normal .c 3506 to 3607 1 to 100       100/100
(100 %)
5 diff
(95.0 %id)
BF221819 Prostate .c 3508 to 3998 495 to 5       491/495
(99 %)
0 diff
(100 %id)
AA552865 low-grade prostatic neoplasia, Prostate .c 3517 to 3734 224 to 7       218/231
(94 %)
0 diff
(100 %id)
AA552868 low-grade prostatic neoplasia, Prostate .c 3517 to 3734 227 to 9       219/235
(93 %)
0 diff
(100 %id)
BF943209 nervous_normal .c 3565 to 3726 1 to 162       162/162
(100 %)
1 diff
(99.4 %id)
BF959443 nervous_normal .c 3591 to 3732 1 to 142       142/142
(100 %)
4 diff
(97.2 %id)
AA093452   .c 3604 to 3903 1 to 294       294/300
(98 %)
13 diff
(95.7 %id)
AA056302 eye, retina .c 3608 to 3978 1 to 371       371/374
(99 %)
6 diff
(98.4 %id)
BF961843 nervous_normal .c 3614 to 3907 1 to 293       293/293
(100 %)
2 diff
(99.4 %id)
AA337358 endometrium .c 3616 to 3810 1 to 195       195/195
(100 %)
0 diff
(100 %id)
AA337768 endometrium .c 3616 to 3937 1 to 322       322/324
(99 %)
1 diff
(99.7 %id)
BE162233 head_neck .c 3674 to 3811 140 to 3     Submitted on the opposite strand 138/140
(98 %)
0 diff
(100 %id)
AI014928   .c 3721 to 4090 375 to 6       370/375
(98 %)
0 diff
(100 %id)
BF374253 stomach_normal .c 3723 to 3859 27 to 163       137/163
(84 %)
0 diff
(100 %id)
DA257044 caudate nucleus .c 3723 to 4305 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
BE769322 prostate_tumor .c 3724 to 4145 425 to 5       421/427
(98 %)
0 diff
(100 %id)
BM715644 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 3742 to 4089 7 to 352   fully sequenced, AAA   346/352
(98 %)
0 diff
(100 %id)
DB002736 breast, tumor tissue .c 3743 to 4286 2 to 546   capped   545/545
(100 %)
4 diff
(99.3 %id)
AA331632 Embryo, 8 weeks .c 3745 to 3995 1 to 251       251/251
(100 %)
4 diff
(98.5 %id)
AA992181   .c 3745 to 4105 362 to 4   tiling clone,   359/362
(99 %)
0 diff
(100 %id)
AW952507   .c 3752 to 4164 1 to 412       412/412
(100 %)
41 diff
(90.1 %id)
DA250500 caudate nucleus .c 3752 to 4295 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
AV752102 Pituitary .c 3762 to 4445 1 to 677       677/734
(92 %)
26 diff
(96.5 %id)
AW945416 lung_normal .c 3763 to 4201 8 to 446       439/446
(98 %)
0 diff
(100 %id)
CN404882 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 3768 to 4430 1 to 662       662/662
(100 %)
2 diff
(99.7 %id)
AV752406 Pituitary .c 3771 to 4385 1 to 614       614/858
(71 %)
23 diff
(97.4 %id)
BM674084 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 3783 to 4088 318 to 15   fully sequenced, AAA   304/304
(100 %)
3 diff
(99.1 %id)
AV723875 hypothalamus .c 3796 to 4468 25 to 687       663/734
(90 %)
48 diff
(93.5 %id)
BG992496 head_neck .c 3806 to 3901 19 to 113       95/117
(81 %)
2 diff
(98.3 %id)
BE929278 placenta_normal .c 3828 to 4056 234 to 8       227/234
(97 %)
0 diff
(100 %id)
BE929285 placenta_normal .c 3828 to 4047 229 to 11       219/229
(95 %)
0 diff
(100 %id)
AW166369 cervix .c 3930 to 4316 1 to 387     Submitted on the opposite strand 387/387
(100 %)
1 diff
(99.8 %id)
AA837467 germinal center B cell .c 3932 to 4454 1 to 523       523/523
(100 %)
1 diff
(99.9 %id)
AA283014 germinal center B cell .c 3938 to 4333 1 to 396     Submitted on the opposite strand 396/400
(99 %)
1 diff
(99.8 %id)
DA564860 heart .c 4028 to 4607 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
AI806675 pooled .c 4034 to 4591 1 to 558     Submitted on the opposite strand 558/558
(100 %)
5 diff
(99.2 %id)
DN991963 brain, whole brain .c 4094 to 4752 1 to 659       659/659
(100 %)
4 diff
(99.4 %id)
CN404889 embryonic stem cells, cell lines H1, H7, andH9 .c 4160 to 4887 1 to 728       728/728
(100 %)
2 diff
(99.8 %id)
CB266228 adipose .c 4286 to 4968 1 to 684       684/684
(100 %)
1 diff
(99.9 %id)
BE175644 head_neck .c 4317 to 4905 1 to 590       590/590
(100 %)
3 diff
(99.5 %id)
CN404885 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 4323 to 4724 19 to 421       403/421
(95 %)
0 diff
(100 %id)
CN404887 embryonic stem cells, DMSO-treated H9 cellline .c 4349 to 4686 1 to 338       338/338
(100 %)
6 diff
(98.3 %id)
BP193666 brain .c 4364 to 4946 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP194847 brain .c 4364 to 4953 1 to 591       591/591
(100 %)
1 diff
(99.9 %id)
BP194861 brain .c 4364 to 4945 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP194902 brain .c 4364 to 4940 1 to 579       579/582
(99 %)
3 diff
(99.5 %id)
BP195304 brain .c 4364 to 4943 1 to 579       579/579
(100 %)
13 diff
(97.8 %id)
DA019449   .c 4369 to 4880 2 to 513   capped   512/512
(100 %)
1 diff
(99.9 %id)
BF674126 Prostate .c 4369 to 4879 1 to 520   AAA   520/520
(100 %)
16 diff
(97.0 %id)
DB136571 thymus .c 4372 to 4915 2 to 544   capped   543/554
(98 %)
3 diff
(99.5 %id)
DB136586 thymus .c 4372 to 4911 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA079601 cerebellum .c 4374 to 4952 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
AW014598   .c 4428 to 4992 1 to 565     Submitted on the opposite strand 565/565
(100 %)
2 diff
(99.7 %id)
BE670454 carcinoid, lung .c 4442 to 4974 1 to 533     Submitted on the opposite strand 533/533
(100 %)
0 diff
(100 %id)
AA332350 Embryo, 8 weeks .c 4452 to 4791 1 to 340       340/340
(100 %)
0 diff
(100 %id)
AI299367 carcinoid, lung .c 4489 to 4926 1 to 438     Submitted on the opposite strand 438/438
(100 %)
0 diff
(100 %id)
BP209258 cerebellum .c 4534 to 5111 1 to 578       578/578
(100 %)
0 diff
(100 %id)
EL951975 eyeball .c 4912 to 5491 32 to 611       580/611
(94 %)
0 diff
(100 %id)
AA283101 germinal center B cell .c 4958 to 5366 409 to 1     Submitted on the opposite strand 409/409
(100 %)
0 diff
(100 %id)
FN173727 breast carcinoma .c 4977 to 5065 1 to 88       88/88
(100 %)
4 diff
(95.5 %id)
NM_001098505.1   .c 5030 to 8682 1 to 3653   RefSeq, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 3653/3653
(100 %)
0 diff
(100 %id)
N72548 liver and spleen .c 5095 to 5296 1 to 202       202/202
(100 %)
0 diff
(100 %id)
BQ016688 lung, Lung Focal Fibrosis .c 5291 to 5953 11 to 672     Submitted on the opposite strand 662/662
(100 %)
1 diff
(99.9 %id)
BE502756 carcinoid, lung .c 5313 to 5726 1 to 414     Submitted on the opposite strand 414/422
(98 %)
1 diff
(99.8 %id)
AA331896 Embryo, 8 weeks .c 5319 to 5636 1 to 318       318/318
(100 %)
0 diff
(100 %id)
AW965285   .c 5320 to 5843 1 to 526       526/526
(100 %)
9 diff
(98.3 %id)
CN404884 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 5377 to 5920 1 to 544       544/544
(100 %)
1 diff
(99.9 %id)
CN404883 embryonic stem cells, cell lines H1, H7, andH9 .c 5384 to 6004 1 to 621       621/621
(100 %)
0 diff
(100 %id)
H53252 liver and spleen .c 5392 to 5790 1 to 405       405/406
(99 %)
8 diff
(98.1 %id)
DA807024 brain .c 5429 to 5994 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB345662 thymus .c 5874 to 6413 543 to 1       543/543
(100 %)
1 diff
(99.9 %id)
H53143 liver and spleen .c 5973 to 6405 441 to 1       441/445
(99 %)
16 diff
(96.5 %id)
AA056074 eye, retina .c 6177 to 6416 278 to 38   tiling clone, AAA   241/267
(90 %)
0 diff
(100 %id)
AK303049 testis .d 1 to 1354 1 to 1354 I255T tiling clone,   1354/1354
(100 %)
1 diff
(100.0 %id)
DC404466 testis .d 1 to 568 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC400079 testis .d 8 to 561 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DB066054 testis .d 43 to 587 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
BP250643 hippocampus .d 749 to 1329 1 to 582   tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
AU118109 whole embryo, mainly head .e 1 to 742 2 to 745   capped   744/749
(99 %)
8 diff
(99.0 %id)
AU118552 whole embryo, mainly head .e 1 to 843 2 to 846   tiling clone, capped   845/855
(98 %)
7 diff
(99.2 %id)
AU136444 placenta .e 1 to 740 2 to 743   tiling clone, capped   742/774
(95 %)
6 diff
(99.3 %id)
AU137825 placenta .e 1 to 707 2 to 712   capped   711/762
(93 %)
12 diff
(98.5 %id)
AU118300 whole embryo, mainly head .e 4 to 532 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
H16925 whole brain .e 22 to 507 1 to 487       487/525
(92 %)
19 diff
(96.4 %id)
DB356692 whole embryo, mainly head .e 1111 to 1638 528 to 1   tiling clone,   528/565
(93 %)
14 diff
(97.6 %id)
DB377313 placenta .e 1111 to 1638 529 to 1   tiling clone,   529/564
(93 %)
6 diff
(99.0 %id)
BF884084 lung_tumor .e 1514 to 1715 211 to 11     Submitted on the opposite strand 201/211
(95 %)
0 diff
(100 %id)
BP391165 pancreatic islet .e 1516 to 2014 500 to 1       500/500
(100 %)
2 diff
(99.6 %id)
AW895124 nervous_normal .e 1532 to 1690 1 to 159       159/162
(98 %)
6 diff
(96.3 %id)
AW895125 nervous_normal .e 1533 to 1690 1 to 158       158/161
(98 %)
6 diff
(96.3 %id)
FN119560 breast carcinoma .e 1539 to 1638 1 to 96       96/96
(100 %)
4 diff
(95.9 %id)
T77373 liver and spleen .e 1569 to 1708 1 to 140       140/148
(94 %)
1 diff
(99.4 %id)
R07082 liver and spleen .e 1569 to 1843 1 to 279       279/433
(64 %)
5 diff
(98.9 %id)
CA778130 Pancreas, Purified pancreatic islet .e 1597 to 1852 1 to 256   fully sequenced,   256/256
(100 %)
5 diff
(98.1 %id)
AV748184 Pituitary .e 1602 to 1929 1 to 321       321/329
(97 %)
3 diff
(99.1 %id)
H65636 liver and spleen .e 1628 to 2014 1 to 392   tiling clone, fully sequenced,   392/392
(100 %)
5 diff
(98.8 %id)
AA521056 germinal center B cell .e 1632 to 2239 603 to 1       603/605
(99 %)
34 diff
(94.4 %id)
DB375020 placenta .e 1645 to 2230 585 to 1       585/587
(99 %)
18 diff
(97.0 %id)
DB356115 whole embryo, mainly head .e 1667 to 2230 561 to 1       561/561
(100 %)
10 diff
(98.3 %id)
AV709141 adrenal gland .e 1668 to 2228 1 to 561   AAA   561/563
(99 %)
1 diff
(99.9 %id)
DB356378 whole embryo, mainly head .e 1687 to 2230 553 to 1       553/559
(98 %)
15 diff
(97.4 %id)
AI962495 pooled germ cell tumors .e 1697 to 1950 1 to 254     Submitted on the opposite strand 254/254
(100 %)
4 diff
(98.5 %id)
AI348495 carcinoid, lung .e 1704 to 2106 1 to 403     Submitted on the opposite strand 403/403
(100 %)
1 diff
(99.8 %id)
BF437954 carcinoid, lung .e 1704 to 2239 1 to 536     Submitted on the opposite strand 536/536
(100 %)
2 diff
(99.7 %id)
BF057706 pooled germ cell tumors .e 1705 to 2160 1 to 456     Submitted on the opposite strand 456/456
(100 %)
0 diff
(100 %id)
BY798995 eye .e 1709 to 2231 1 to 522   tiling clone,   522/522
(100 %)
1 diff
(99.9 %id)
AA074363 pineal gland .e 1709 to 1898 1 to 191     Submitted on the opposite strand 191/193
(98 %)
6 diff
(96.9 %id)
AW594236 pooled germ cell tumors .e 1712 to 1975 1 to 264     Submitted on the opposite strand 264/264
(100 %)
0 diff
(100 %id)
AI653356 pooled germ cell tumors .e 1720 to 2221 502 to 1       502/502
(100 %)
1 diff
(99.9 %id)
AI701464 carcinoid, lung .e 1720 to 2229 510 to 1       510/510
(100 %)
2 diff
(99.7 %id)
BF447949 carcinoid, lung .e 1728 to 2200 1 to 473     Submitted on the opposite strand 473/473
(100 %)
0 diff
(100 %id)
CN404890 embryonic stem cells, DMSO-treated H9 cellline .e 1735 to 2230 1 to 496   AAA   496/496
(100 %)
0 diff
(100 %id)
AW593392 pooled germ cell tumors .e 1736 to 2179 1 to 444     Submitted on the opposite strand 444/444
(100 %)
1 diff
(99.8 %id)
AV725171 hypothalamus .e 1741 to 2230 1 to 490   AAA   490/490
(100 %)
0 diff
(100 %id)
AV726113 hypothalamus .e 1741 to 2230 1 to 489   AAA   489/489
(100 %)
7 diff
(98.6 %id)
AI378418 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 1758 to 2230 473 to 1       473/477
(99 %)
0 diff
(100 %id)
BE464603 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .e 1762 to 2230 469 to 1       469/469
(100 %)
0 diff
(100 %id)
R96695 liver and spleen .e 1769 to 2220 9 to 473   fully sequenced,   465/473
(98 %)
0 diff
(100 %id)
BF115738 carcinoid, lung .e 1769 to 2233 468 to 1       468/468
(100 %)
3 diff
(99.4 %id)
BF224290 carcinoid, lung .e 1770 to 2233 464 to 1       464/464
(100 %)
1 diff
(99.8 %id)
BE504188 carcinoid, lung .e 1775 to 2229 455 to 1       455/455
(100 %)
0 diff
(100 %id)
AW071480 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .e 1780 to 2230 451 to 1       451/451
(100 %)
0 diff
(100 %id)
BE670942 carcinoid, lung .e 1780 to 2232 453 to 1       453/453
(100 %)
0 diff
(100 %id)
AI333282 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 1781 to 2223 443 to 1       443/443
(100 %)
0 diff
(100 %id)
AA468827 colon .e 1787 to 2230 444 to 1       444/444
(100 %)
0 diff
(100 %id)
H16817 whole brain .e 1788 to 2238 467 to 1       467/467
(100 %)
19 diff
(96.0 %id)
AI266097 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 1798 to 2230 433 to 1       433/433
(100 %)
0 diff
(100 %id)
AI436739 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 1798 to 2217 420 to 1       420/420
(100 %)
0 diff
(100 %id)
AI312694 lung .e 1812 to 2229 418 to 1       418/418
(100 %)
0 diff
(100 %id)
CA777866 Pancreas, Purified pancreatic islet .e 1822 to 2214 393 to 1   fully sequenced,   393/393
(100 %)
4 diff
(99.0 %id)
AA815179 germinal center B cell .e 1827 to 2239 413 to 1       413/413
(100 %)
1 diff
(99.8 %id)
AW264302 brain, three pooled meningiomas .e 1829 to 2230 402 to 1       402/402
(100 %)
0 diff
(100 %id)
AI738899 colon, colon tumor, RER+ .e 1846 to 2229 384 to 1       384/384
(100 %)
3 diff
(99.3 %id)
AA503841 colon .e 1847 to 2230 384 to 1       384/384
(100 %)
0 diff
(100 %id)
AA664352   .e 1849 to 2235 389 to 2       388/389
(99 %)
0 diff
(100 %id)
R96646 liver and spleen .e 1903 to 2198 298 to 1   fully sequenced,   298/298
(100 %)
2 diff
(99.4 %id)
T81483 liver and spleen .e 1906 to 2230 329 to 1       329/341
(96 %)
4 diff
(98.9 %id)
H65637 liver and spleen .e 1984 to 2217 234 to 1   fully sequenced,   234/234
(100 %)
0 diff
(100 %id)
AA514565 colon .e 1991 to 2230 240 to 1       240/240
(100 %)
1 diff
(99.6 %id)
AI651018 pooled germ cell tumors .e 1994 to 2230 237 to 1       237/237
(100 %)
0 diff
(100 %id)
AI971430 pooled germ cell tumors .e 1994 to 2210 237 to 21       217/237
(91 %)
0 diff
(100 %id)
AA348549 brain, hippocampus .e 2023 to 2230 208 to 1       208/208
(100 %)
0 diff
(100 %id)
R07037 liver and spleen .e 2047 to 2223 177 to 1       177/177
(100 %)
0 diff
(100 %id)
AF131750   .f 1 to 1850 1 to 1851 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 1851/1851
(100 %)
4 diff
(99.8 %id)
CF995850 mixed .f 431 to 1190 1 to 759       759/760
(99 %)
13 diff
(98.3 %id)
NM_030881.3   .f 432 to 4090 1 to 3659 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 3659/3659
(100 %)
0 diff
(100 %id)
TI_44166151   .f 487 to 1326 117 to 961       845/961
(87 %)
26 diff
(97.3 %id)
BI545691 brain, hippocampus .f 488 to 1326 1 to 844       844/844
(100 %)
26 diff
(97.0 %id)
TI_159717769   .f 770 to 1650 948 to 82 E2V D3K V4M E5S D6V ... AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 867/996
(87 %)
20 diff
(98.0 %id)
CN346042 embryonic stem cells, DMSO-treated H9 cellline .g 1 to 638 4 to 641   tiling clone,   641/641
(100 %)
5 diff
(99.3 %id)
AU118787 whole embryo, mainly head .g 1 to 860 2 to 856 C153Y V183G C190W R192X tiling clone, capped   855/856
(99 %)
13 diff
(98.5 %id)
FN167173 breast carcinoma .g 441 to 534 1 to 93       93/93
(100 %)
3 diff
(96.8 %id)
T99547 liver and spleen .g 503 to 847 357 to 1       357/516
(69 %)
18 diff
(96.6 %id)
BI020544 marrow .g 519 to 770 252 to 1   tiling clone,   252/252
(100 %)
3 diff
(98.9 %id)
BI018302 marrow .g 598 to 770 1 to 171       171/171
(100 %)
3 diff
(98.3 %id)
DW409207 Liver .g 685 to 1008 17 to 340   tiling clone,   324/340
(95 %)
0 diff
(100 %id)
C19075 placenta .g 923 to 1263 1 to 339   tiling clone,   339/343
(98 %)
7 diff
(98.0 %id)
C17729 placenta .g 945 to 1281 19 to 350       332/362
(91 %)
0 diff
(100 %id)
CV416344 placenta_normal .g 1021 to 1341 339 to 16     Submitted on the opposite strand 324/339
(95 %)
0 diff
(100 %id)
DB356972 whole embryo, mainly head .g 1157 to 1717 554 to 1   tiling clone,   554/576
(96 %)
11 diff
(98.1 %id)
BE085810 breast .g 1187 to 1384 204 to 10     Submitted on the opposite strand 195/220
(88 %)
0 diff
(100 %id)
BF993032 placenta_normal .g 1543 to 1953 1 to 411   tiling clone,   411/411
(100 %)
1 diff
(99.8 %id)
BE002073 breast_normal .g 1568 to 1897 331 to 1     Submitted on the opposite strand 331/335
(98 %)
0 diff
(100 %id)
AJ705349 bone marrow .g 1929 to 2228 10 to 316   tiling clone,   307/316
(97 %)
0 diff
(100 %id)
BE670471 carcinoid, lung .g 2103 to 2531 1 to 429   tiling clone, Submitted on the opposite strand 429/429
(100 %)
1 diff
(99.8 %id)
FN174002 breast carcinoma .g 2115 to 2214 1 to 99       99/104
(95 %)
1 diff
(99.1 %id)
AI903742 breast .g 2124 to 2332 1 to 209       209/209
(100 %)
1 diff
(99.6 %id)
AA252746 germinal center B cell .g 2126 to 2596 1 to 469   tiling clone, fully sequenced,   469/469
(100 %)
4 diff
(99.2 %id)
AA262882 germinal center B cell .g 2566 to 2878 314 to 1   tiling clone, fully sequenced,   314/314
(100 %)
1 diff
(99.7 %id)
TI_149314319   .h 1 to 795 878 to 89 L4W A5L P6L T7P R8E ... tiling clone, AAA   790/971
(81 %)
8 diff
(99.2 %id)
CB305987 lung, Primary Lung Cystic Fibrosis EpithelialCells .h 141 to 795 673 to 19   tiling clone, AAA   655/656
(99 %)
1 diff
(99.9 %id)
BF904356 marrow .h 718 to 1028 313 to 1   tiling clone, Submitted on the opposite strand 313/313
(100 %)
11 diff
(96.5 %id)
T99443 liver and spleen .h 971 to 1310 1 to 353   tiling clone,   353/393
(89 %)
17 diff
(95.7 %id)
FN097648 breast carcinoma .h 1038 to 1121 1 to 85       85/89
(95 %)
3 diff
(96.7 %id)
CA406829 adipose .h 1141 to 1745 615 to 12   tiling clone, Submitted on the opposite strand 604/620
(97 %)
0 diff
(100 %id)
N77284 liver and spleen .h 1290 to 1496 1 to 209   tiling clone,   209/212
(98 %)
6 diff
(97.2 %id)
N55076 liver and spleen .h 2286 to 2603 318 to 1   tiling clone,   318/318
(100 %)
6 diff
(98.2 %id)
BI022262 marrow .i 1 to 443 442 to 1 P2Q W17X tiling clone,   441/444
(99 %)
1 diff
(99.8 %id)
DB262226 uterus .j 1 to 570 2 to 571   tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
AI523578 B-cell, chronic lymphotic leukemia .j 59 to 551 493 to 1       493/493
(100 %)
0 diff
(100 %id)
BG719080 testis .j 402 to 1120 1 to 718 W43R tiling clone,   718/718
(100 %)
12 diff
(98.4 %id)
AI523791 B-cell, chronic lymphotic leukemia .j 544 to 1067 1 to 523   tiling clone, Submitted on the opposite strand 523/523
(100 %)
4 diff
(99.3 %id)
AI809740 B-cell, chronic lymphotic leukemia .j 588 to 1025 1 to 440     Submitted on the opposite strand 440/440
(100 %)
5 diff
(98.9 %id)
BX471615   .k 1 to 511 25 to 540 Q5R P27L R28P L29S Y30L tiling clone,   516/540
(95 %)
9 diff
(98.4 %id)
CV384607 stomach .l-u 1 to 456 4 to 466 V14Y P15L H16I Y17T H18N ... tiling clone,   463/466
(99 %)
0 diff
(100 %id)
DA795972 brain .m 1 to 437 5 to 441 P41X tiling clone, capped   440/440
(100 %)
0 diff
(100 %id)
AV748791 Pituitary .m 76 to 432 1 to 350       350/351
(99 %)
10 diff
(97.2 %id)
BF874161 lung_tumor .n-u 1 to 165 1 to 166 V9I S19L N20* tiling clone,   166/166
(100 %)
5 diff
(97.0 %id)
AB209595 Spleen Gene DDX17, variant not shown         Suspected internal deletion, this clone was ignored    
CU012992 Synthetic constructs Gene DDX17, variant not shown         Suspected internal deletion, this clone was ignored    
318 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m, .n-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI