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Gene DDX10TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
281 supporting clones for gene DDX10 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC401755 testis DDX10.a 1 to 535 2 to 536   tiling clone,   536/536
(100 %)
0 diff
(100 %id)
DA166895 amygdala DDX10.a 1 to 565 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DB091416 testis DDX10.a 18 to 579 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
BG944814 blood DDX10.a 27 to 462 1 to 436       436/436
(100 %)
2 diff
(99.6 %id)
DB077618 testis DDX10.a 29 to 586 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DB081513 testis DDX10.a 29 to 583 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA481704   DDX10.a 31 to 596 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DC384472   DDX10.a 32 to 495 1 to 465       465/471
(98 %)
3 diff
(99.4 %id)
DC406261 thymus DDX10.a 32 to 539 1 to 509       509/509
(100 %)
5 diff
(99.1 %id)
DA684454   DDX10.a 33 to 568 2 to 539   capped   538/538
(100 %)
4 diff
(99.3 %id)
DW421785 Liver DDX10.a 35 to 314 9 to 288       280/296
(94 %)
6 diff
(98.0 %id)
DW429734 Liver DDX10.a 35 to 423 9 to 397       389/397
(97 %)
9 diff
(97.8 %id)
DB225140 trachea DDX10.a 38 to 620 2 to 584   capped   583/584
(99 %)
3 diff
(99.5 %id)
DA166901 amygdala DDX10.a 39 to 603 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA494227 brain DDX10.a 39 to 591 2 to 554   capped   553/553
(100 %)
5 diff
(99.1 %id)
CD686646 normal nasopharynx DDX10.a 41 to 454 14 to 427       414/427
(96 %)
7 diff
(98.4 %id)
AL702997 human skeletal muscle DDX10.a 41 to 786 1 to 747       747/754
(99 %)
5 diff
(99.4 %id)
DA044611 bladder DDX10.a 43 to 604 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA068835 cerebellum DDX10.a 43 to 607 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA125014 cerebellum DDX10.a 43 to 611 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA172601 amygdala DDX10.a 43 to 610 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA180301 amygdala DDX10.a 43 to 604 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA188239 amygdala DDX10.a 43 to 575 2 to 535   capped   534/534
(100 %)
4 diff
(99.3 %id)
DA202795 brain DDX10.a 43 to 623 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DA253814 caudate nucleus DDX10.a 43 to 615 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA263748 caudate nucleus DDX10.a 43 to 618 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA267653 caudate nucleus DDX10.a 43 to 576 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DA287485 corpus callosum DDX10.a 43 to 610 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA305172 hippocampus DDX10.a 43 to 627 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA348459 substantia nigra DDX10.a 43 to 618 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA370440 thalamus DDX10.a 43 to 608 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA454715 tongue, tumor tissue DDX10.a 43 to 603 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA478579   DDX10.a 43 to 623 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA524967 brain DDX10.a 43 to 608 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA538130 Kidney DDX10.a 43 to 631 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DA581738 lung DDX10.a 43 to 603 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA581956 lung DDX10.a 43 to 607 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA697296   DDX10.a 43 to 604 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DA710138   DDX10.a 43 to 580 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA719276   DDX10.a 43 to 588 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DA729666   DDX10.a 43 to 570 2 to 531   capped   530/530
(100 %)
2 diff
(99.7 %id)
DA743152   DDX10.a 43 to 593 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA751525   DDX10.a 43 to 603 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA800665 brain DDX10.a 43 to 591 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA815301   DDX10.a 43 to 603 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA884407   DDX10.a 43 to 614 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA909972   DDX10.a 43 to 618 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA917592 small intestine DDX10.a 43 to 610 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA928081 small intestine DDX10.a 43 to 604 2 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
DB000988 breast, tumor tissue DDX10.a 43 to 575 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
DB073419 testis DDX10.a 43 to 572 2 to 533   capped   532/532
(100 %)
3 diff
(99.5 %id)
DB089142 testis DDX10.a 43 to 582 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DB096992 testis DDX10.a 43 to 611 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB198915 trachea DDX10.a 44 to 618 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA528036 brain DDX10.a 45 to 649 2 to 606   capped   605/606
(99 %)
2 diff
(99.7 %id)
DA582856 lung DDX10.a 45 to 604 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DA662277   DDX10.a 45 to 597 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA706133   DDX10.a 45 to 608 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA738048   DDX10.a 45 to 903 2 to 856   capped   855/861
(99 %)
12 diff
(98.7 %id)
DB036612 testis DDX10.a 45 to 614 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB072577 testis DDX10.a 45 to 578 2 to 535   capped   534/534
(100 %)
3 diff
(99.5 %id)
DA526436 brain DDX10.a 47 to 605 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DA888606   DDX10.a 51 to 610 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
BC091521 testis DDX10.a 52 to 3252 1 to 3201 exact tiling clone, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 3201/3201
(100 %)
0 diff
(100 %id)
CD359376 testis DDX10.a 53 to 786 26 to 762       737/938
(78 %)
14 diff
(98.6 %id)
DB101837 thymus DDX10.a 53 to 607 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BG498951 adenocarcinoma, Prostate DDX10.a 55 to 455 1 to 422       422/422
(100 %)
24 diff
(94.4 %id)
DA577991   DDX10.a 56 to 621 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DB182952 liver, tumor tissue DDX10.a 56 to 621 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB270414 uterus DDX10.a 56 to 626 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
AU143115   DDX10.a 56 to 786 2 to 733   capped   732/876
(83 %)
6 diff
(99.4 %id)
DA474467   DDX10.a 57 to 633 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
DA958320 Spleen DDX10.a 58 to 614 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DB450872 testis DDX10.a 59 to 536 1 to 478       478/478
(100 %)
0 diff
(100 %id)
BU170172 embryonal carcinoma, cell line, testis DDX10.a 59 to 930 1 to 876       876/879
(99 %)
7 diff
(99.3 %id)
DA128393 cerebellum DDX10.a 63 to 644 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
AB040537   DDX10.a 64 to 3252 1 to 3189 exact AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 3189/3189
(100 %)
0 diff
(100 %id)
NM_004398.2   DDX10.a 64 to 3252 1 to 3189 exact RefSeq, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 3189/3189
(100 %)
1 diff
(100.0 %id)
U28042   DDX10.a 64 to 3252 1 to 3189 D647A E658D K661N AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 3189/3189
(100 %)
4 diff
(99.9 %id)
DA605150   DDX10.a 67 to 610 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA840689 placenta DDX10.a 67 to 604 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA840690 placenta DDX10.a 67 to 593 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
DB088821 testis DDX10.a 67 to 602 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DB088867 testis DDX10.a 67 to 602 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
AK315216 cerebellum DDX10.a 69 to 2756 1 to 2688 exact     2688/2688
(100 %)
1 diff
(100.0 %id)
DA145285 amygdala DDX10.a 69 to 639 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA444807 tongue, tumor tissue DDX10.a 69 to 639 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DA551252   DDX10.a 69 to 597 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA837718 placenta DDX10.a 69 to 610 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA848853 placenta DDX10.a 69 to 645 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DB086220 testis DDX10.a 69 to 629 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DB098054 testis DDX10.a 69 to 666 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DB271084 uterus DDX10.a 69 to 633 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA116696 cerebellum DDX10.a 70 to 666 2 to 598   capped   597/603
(99 %)
2 diff
(99.7 %id)
DA707175   DDX10.a 70 to 642 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA482556   DDX10.a 77 to 666 2 to 591   capped   590/590
(100 %)
2 diff
(99.7 %id)
DA070132 cerebellum DDX10.a 78 to 610 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DA665837   DDX10.a 81 to 624 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA702303   DDX10.a 81 to 620 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DB078927 testis DDX10.a 81 to 643 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB259535 uterus DDX10.a 81 to 666 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
BG682848 brain, neuroblastoma, cell line DDX10.a 85 to 818 1 to 738       736/738
(99 %)
7 diff
(99.1 %id)
CN282488 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells DDX10.a 88 to 831 7 to 753       747/753
(99 %)
7 diff
(99.1 %id)
AW674853 cervix DDX10.a 89 to 608 1 to 520     Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 520/520
(100 %)
1 diff
(99.9 %id)
TI_891526932   DDX10.a 93 to 1188 45 to 1131       1087/1248
(87 %)
24 diff
(98.1 %id)
TI_891526944   DDX10.a 93 to 1187 43 to 1127       1085/1269
(85 %)
17 diff
(98.7 %id)
TI_891526933   DDX10.a 93 to 1187 47 to 1134       1088/1266
(85 %)
20 diff
(98.5 %id)
TI_891526945   DDX10.a 93 to 1181 44 to 1126       1083/1268
(85 %)
14 diff
(98.9 %id)
BU931762 ovary, teratocarcinoma, cell line DDX10.a 94 to 843 1 to 761       761/938
(81 %)
21 diff
(97.8 %id)
BC093654 Lung and heart, PCR rescued clones DDX10.a 96 to 2775 1 to 2680 exact     2680/2680
(100 %)
0 diff
(100 %id)
BC093656 Lung and heart, PCR rescued clones DDX10.a 96 to 2782 1 to 2687 exact     2687/2687
(100 %)
0 diff
(100 %id)
BG387872 embryonal carcinoma, cell line, testis DDX10.a 97 to 794 1 to 702       702/835
(84 %)
20 diff
(97.7 %id)
BC064921 Eye, retinoblastoma DDX10.a 98 to 2362 1 to 2263   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 2263/2266
(99 %)
4 diff
(99.9 %id)
AL705075 human skeletal muscle DDX10.a 99 to 700 1 to 602       602/602
(100 %)
0 diff
(100 %id)
BU159524 eye, retinoblastoma DDX10.a 100 to 976 1 to 881   available from MGC,   881/890
(98 %)
6 diff
(99.4 %id)
BF684803 leiomyosarcoma cell line, uterus DDX10.a 103 to 919 1 to 816       816/866
(94 %)
21 diff
(97.6 %id)
BC049217 Lymph, lymphoma DDX10.a 104 to 2362 1 to 2257   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 2257/2260
(99 %)
4 diff
(99.9 %id)
BM455432 lymph, lymphoma, cell line DDX10.a 104 to 976 13 to 886   available from MGC,   874/1028
(85 %)
14 diff
(98.7 %id)
BE782472 eye, retinoblastoma DDX10.a 112 to 786 1 to 669       669/907
(73 %)
13 diff
(98.6 %id)
CD706934 normal nasopharynx DDX10.a 126 to 302 1 to 178       178/178
(100 %)
1 diff
(99.5 %id)
DB032779 testis DDX10.a 135 to 740 2 to 608   capped   607/607
(100 %)
1 diff
(99.9 %id)
DB083752 testis DDX10.a 135 to 670 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
BM047909 carcinoma, cell line, Prostate DDX10.a 149 to 1020 1 to 885       858/948
(90 %)
40 diff
(95.8 %id)
BQ935964 carcinoma, cell line, Prostate DDX10.a 153 to 913 1 to 771       771/907
(85 %)
22 diff
(97.6 %id)
BQ928472 carcinoma, cell line, Prostate DDX10.a 153 to 1032 1 to 880       880/881
(99 %)
4 diff
(99.6 %id)
DB092153 testis DDX10.a 156 to 684 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
TI_891527995   DDX10.a 369 to 1440 16 to 1087     Submitted on the opposite strand 1072/1231
(87 %)
9 diff
(99.3 %id)
TI_891528009   DDX10.a 377 to 1450 12 to 1080     Submitted on the opposite strand 1069/1206
(88 %)
19 diff
(98.5 %id)
TI_891528625   DDX10.a 378 to 1569 1187 to 4       1187/1222
(97 %)
34 diff
(97.3 %id)
BE281554 choriocarcinoma, placenta DDX10.a 391 to 960 1 to 569       569/730
(77 %)
22 diff
(97.0 %id)
BE279956 choriocarcinoma, placenta DDX10.a 393 to 1037 1 to 636       636/695
(91 %)
21 diff
(97.0 %id)
TI_891528609   DDX10.a 432 to 1538 1124 to 25       1100/1218
(90 %)
16 diff
(98.7 %id)
TI_891528016   DDX10.a 470 to 1694 1 to 1223     Submitted on the opposite strand 1225/1238
(98 %)
29 diff
(97.7 %id)
TI_891528002   DDX10.a 479 to 1625 14 to 1148     Submitted on the opposite strand 1137/1240
(91 %)
25 diff
(98.0 %id)
BU161207 melanotic melanoma, skin DDX10.a 514 to 1334 1 to 826       826/831
(99 %)
8 diff
(99.1 %id)
DA903496   DDX10.a 519 to 1087 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BM917130 blood, natural killer cells, cell line DDX10.a 541 to 1448 1 to 910       910/1093
(83 %)
16 diff
(98.6 %id)
BQ310928 breast_normal DDX10.a 548 to 849 304 to 3       302/316
(95 %)
5 diff
(98.5 %id)
BQ328258 leiomios DDX10.a 658 to 1322 4 to 669       666/669
(99 %)
12 diff
(98.3 %id)
TI_891528608   DDX10.a 664 to 1844 1175 to 5       1171/1261
(92 %)
14 diff
(98.9 %id)
AA081749   DDX10.a 668 to 1105 1 to 438       438/439
(99 %)
4 diff
(99.1 %id)
AA218842 brain, neuroepithelial cells DDX10.a 679 to 1007 27 to 358       332/358
(92 %)
10 diff
(97.3 %id)
AB001343   DDX10.a 701 to 977 1 to 277       277/333
(83 %)
1 diff
(99.7 %id)
DA201578 brain DDX10.a 706 to 1280 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
TI_891528600   DDX10.a 725 to 1831 1114 to 1       1114/1226
(90 %)
38 diff
(97.0 %id)
TI_891527996   DDX10.a 742 to 1740 35 to 1044     Submitted on the opposite strand 1010/1290
(78 %)
27 diff
(98.0 %id)
TI_891528010   DDX10.a 758 to 1629 19 to 891     Submitted on the opposite strand 873/1040
(83 %)
29 diff
(97.3 %id)
TI_891528616   DDX10.a 774 to 1830 1050 to 2       1049/1157
(90 %)
36 diff
(96.9 %id)
TI_891528599   DDX10.a 782 to 1973 1193 to 7       1187/1239
(95 %)
16 diff
(98.8 %id)
AB000267   DDX10.a 785 to 1026 132 to 373       242/373
(64 %)
6 diff
(98.4 %id)
TI_891528624   DDX10.a 791 to 1844 1056 to 4       1053/1244
(84 %)
4 diff
(99.7 %id)
TI_891528615   DDX10.a 794 to 1973 1181 to 11       1171/1240
(94 %)
24 diff
(98.1 %id)
CD703177 normal nasopharynx DDX10.a 812 to 1327 31 to 545       515/545
(94 %)
10 diff
(98.2 %id)
BJ990678 hepatoblastoma DDX10.a 843 to 1433 10 to 600       591/600
(98 %)
6 diff
(99.0 %id)
DA589924 lung DDX10.a 846 to 1394 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA302589 hippocampus DDX10.a 905 to 1468 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
CN282486 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 DDX10.a 957 to 1576 1 to 620       620/620
(100 %)
2 diff
(99.7 %id)
TI_891527997   DDX10.a 985 to 1979 6 to 986     Submitted on the opposite strand 981/1204
(81 %)
21 diff
(98.3 %id)
TI_891528003   DDX10.a 985 to 1891 7 to 909     Submitted on the opposite strand 903/1137
(79 %)
15 diff
(98.7 %id)
TI_891528011   DDX10.a 992 to 1987 15 to 1020     Submitted on the opposite strand 1006/1340
(75 %)
37 diff
(97.3 %id)
TI_891528017   DDX10.a 1024 to 1728 23 to 734     Submitted on the opposite strand 712/734
(97 %)
25 diff
(96.6 %id)
TI_891528630   DDX10.a 1099 to 2319 1210 to 1       1210/1264
(95 %)
24 diff
(98.2 %id)
TI_891528607   DDX10.a 1128 to 2316 1182 to 4       1179/1255
(93 %)
10 diff
(99.3 %id)
TI_891528623   DDX10.a 1168 to 2317 1148 to 2       1147/1250
(91 %)
12 diff
(99.1 %id)
CD654730 Embryonic Stem cells DDX10.a 1175 to 1888 1 to 706       706/784
(90 %)
19 diff
(97.6 %id)
TI_891528004   DDX10.a 1261 to 2093 8 to 841     Submitted on the opposite strand 834/1294
(64 %)
7 diff
(99.5 %id)
TI_891527990   DDX10.a 1262 to 2093 8 to 839     Submitted on the opposite strand 832/1247
(66 %)
7 diff
(99.5 %id)
TI_891528614   DDX10.a 1266 to 2314 1051 to 5       1047/1247
(83 %)
5 diff
(99.6 %id)
TI_891528012   DDX10.a 1268 to 2093 13 to 838     Submitted on the opposite strand 826/1269
(65 %)
7 diff
(99.5 %id)
TI_891527998   DDX10.a 1272 to 2093 16 to 836     Submitted on the opposite strand 821/1213
(67 %)
7 diff
(99.5 %id)
TI_891528606   DDX10.a 1370 to 2579 1223 to 20       1208/1254
(96 %)
23 diff
(98.2 %id)
TI_891528613   DDX10.a 1451 to 2624 1173 to 3       1171/1235
(94 %)
15 diff
(98.8 %id)
DB370657   DDX10.a 1451 to 1884 435 to 1       435/436
(99 %)
1 diff
(99.8 %id)
TI_891528622   DDX10.a 1453 to 2600 1147 to 4       1144/1248
(91 %)
8 diff
(99.4 %id)
AW385844 leiomios DDX10.a 1485 to 1860 382 to 8       375/382
(98 %)
1 diff
(99.8 %id)
TI_891528629   DDX10.a 1538 to 2617 1097 to 14       1084/1249
(86 %)
4 diff
(99.7 %id)
TI_891526957   DDX10.a 1597 to 2787 1229 to 63       1090/1232
(88 %)
21 diff
(98.3 %id)
BI047286 prostate_tumor DDX10.a 1601 to 2093 31 to 523       493/639
(77 %)
2 diff
(99.7 %id)
BM561644 blood, natural killer cells, cell line DDX10.a 1619 to 2433 16 to 832       817/1041
(78 %)
11 diff
(99.0 %id)
CX866394 embryonic stem DDX10.a 1624 to 2349 1 to 726       726/726
(100 %)
0 diff
(100 %id)
BI047283 prostate_tumor DDX10.a 1630 to 1794 173 to 5       169/173
(97 %)
0 diff
(100 %id)
AA249654   DDX10.a 1660 to 1950 1 to 286       286/288
(99 %)
15 diff
(94.8 %id)
DB516361 testis DDX10.a 1697 to 2149 1 to 453     Submitted on the opposite strand 453/453
(100 %)
0 diff
(100 %id)
CR978030 T-Lymphocytes DDX10.a 1713 to 2531 1 to 819       819/819
(100 %)
0 diff
(100 %id)
TI_891526956   DDX10.a 1715 to 2785 1120 to 56       1065/1269
(83 %)
15 diff
(98.9 %id)
BP348386 brain DDX10.a 1722 to 2302 1 to 582       580/582
(99 %)
1 diff
(99.9 %id)
TI_891527991   DDX10.a 1728 to 2782 8 to 1061     Submitted on the opposite strand 1054/1219
(86 %)
18 diff
(98.6 %id)
TI_891528005   DDX10.a 1735 to 2787 14 to 1075     Submitted on the opposite strand 1062/1273
(83 %)
19 diff
(98.6 %id)
BI047282 prostate_tumor DDX10.a 1739 to 1871 129 to 1       129/129
(100 %)
4 diff
(96.9 %id)
AU160252   DDX10.a 1795 to 2340 546 to 1       546/546
(100 %)
9 diff
(98.4 %id)
TI_891527999   DDX10.a 1799 to 2785 1 to 987     Submitted on the opposite strand 987/1206
(81 %)
8 diff
(99.4 %id)
TI_891528013   DDX10.a 1806 to 2787 1 to 983     Submitted on the opposite strand 983/1234
(79 %)
5 diff
(99.6 %id)
TI_891526968   DDX10.a 1810 to 2785 1025 to 57       969/1187
(81 %)
9 diff
(99.3 %id)
TI_891526969   DDX10.a 1810 to 2787 1039 to 63       977/1213
(80 %)
6 diff
(99.6 %id)
BE747617 adenocarcinoma cell line, ovary DDX10.a 1814 to 2527 26 to 739       714/739
(96 %)
7 diff
(99.1 %id)
BG474729 eye, retinoblastoma DDX10.a 1820 to 2485 1 to 670       668/670
(99 %)
5 diff
(99.3 %id)
BU159235 eye, retinoblastoma DDX10.a 1830 to 2165 1 to 336       336/336
(100 %)
5 diff
(98.6 %id)
CD513226 brain, Pituitary DDX10.a 1859 to 2580 1 to 725       725/970
(74 %)
9 diff
(99.1 %id)
TI_891527992   DDX10.a 1886 to 2785 1 to 899     Submitted on the opposite strand 899/1224
(73 %)
10 diff
(99.2 %id)
TI_159715143   DDX10.a 1887 to 2358 539 to 68   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 472/1089
(43 %)
1 diff
(100.0 %id)
CB306670 Human Lung Epithelial cells, lung DDX10.a 1887 to 2354 468 to 1       468/473
(98 %)
1 diff
(99.8 %id)
TI_891528006   DDX10.a 1894 to 2787 9 to 901     Submitted on the opposite strand 893/1221
(73 %)
4 diff
(99.7 %id)
AA084582   DDX10.a 1986 to 2336 351 to 1       351/351
(100 %)
0 diff
(100 %id)
TI_891528000   DDX10.a 2050 to 2785 1 to 734     Submitted on the opposite strand 734/1222
(60 %)
8 diff
(99.4 %id)
TI_891528014   DDX10.a 2054 to 2787 6 to 738     Submitted on the opposite strand 733/1245
(58 %)
9 diff
(99.3 %id)
BF800196 colon_ins DDX10.a 2090 to 2355 37 to 303       267/303
(88 %)
15 diff
(95.1 %id)
BF094527 uterus_tumor DDX10.a 2112 to 2437 382 to 59       325/384
(84 %)
2 diff
(99.5 %id)
BX283469 Burkitt lymphoma, lymph DDX10.a 2113 to 2652 1 to 540       540/540
(100 %)
0 diff
(100 %id)
BE297836 muscle, rhabdomyosarcoma DDX10.a 2113 to 2695 28 to 610       583/610
(95 %)
6 diff
(99.1 %id)
BE514462 Burkitt lymphoma, lymph DDX10.a 2114 to 2727 32 to 643       612/643
(95 %)
11 diff
(98.3 %id)
BE562105 Burkitt lymphoma, lymph DDX10.a 2114 to 2658 42 to 578       537/578
(92 %)
9 diff
(98.5 %id)
BE253579 eye, retinoblastoma DDX10.a 2115 to 2876 1 to 754       754/754
(100 %)
16 diff
(97.9 %id)
BM051595 Burkitt lymphoma, lymph DDX10.a 2126 to 2886 1 to 766       766/766
(100 %)
15 diff
(98.1 %id)
AA648240 Ewing's sarcoma DDX10.a 2164 to 2525 1 to 358       358/358
(100 %)
6 diff
(98.4 %id)
CB163252 Liver DDX10.a 2164 to 2842 1 to 679       679/679
(100 %)
0 diff
(100 %id)
BG676224 skin, squamous cell carcinoma DDX10.a 2195 to 3141 1 to 948       948/999
(94 %)
27 diff
(97.3 %id)
CN282487 embryonic stem cells, cell lines H1, H7, andH9 DDX10.a 2228 to 2826 1 to 599       599/599
(100 %)
1 diff
(99.9 %id)
AA373519 lung DDX10.a 2230 to 2494 1 to 265       265/265
(100 %)
0 diff
(100 %id)
TI_891527993   DDX10.a 2323 to 2785 12 to 474     Submitted on the opposite strand 463/1262
(36 %)
8 diff
(99.4 %id)
TI_891528007   DDX10.a 2331 to 2787 13 to 469     Submitted on the opposite strand 457/1240
(36 %)
9 diff
(99.3 %id)
BE745370 adenocarcinoma cell line, ovary DDX10.a 2370 to 2875 1 to 508       508/512
(99 %)
13 diff
(97.5 %id)
BE175913 head_neck DDX10.a 2407 to 2637 231 to 2     Submitted on the opposite strand 230/235
(97 %)
4 diff
(98.3 %id)
BE176037 head_neck DDX10.a 2431 to 2666 241 to 13     Submitted on the opposite strand 229/269
(85 %)
1 diff
(99.7 %id)
BE176295 head_neck DDX10.a 2431 to 2677 253 to 7     Submitted on the opposite strand 247/281
(87 %)
7 diff
(97.6 %id)
BG201865   DDX10.a 2569 to 3250 686 to 6     Submitted on the opposite strand 681/820
(83 %)
0 diff
(100 %id)
BG187431   DDX10.a 2575 to 3262 1 to 688   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 688/688
(100 %)
14 diff
(98.0 %id)
BG210220   DDX10.a 2575 to 3263 1 to 691       691/693
(99 %)
8 diff
(98.9 %id)
BG185329   DDX10.a 2576 to 3252 1 to 678   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 678/678
(100 %)
6 diff
(99.2 %id)
BG192647   DDX10.a 2576 to 3265 1 to 692       692/710
(97 %)
13 diff
(98.2 %id)
BG198107   DDX10.a 2576 to 3260 1 to 687       687/688
(99 %)
5 diff
(99.3 %id)
BG181315   DDX10.a 2580 to 3252 8 to 682   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 675/682
(98 %)
6 diff
(99.2 %id)
AI689145 serous papillary carcinoma, high grade, 2pooled tumors, uterus DDX10.a 2584 to 3252 666 to 1       666/667
(99 %)
13 diff
(98.1 %id)
BG191613   DDX10.a 2589 to 3260 10 to 682       673/771
(87 %)
6 diff
(99.3 %id)
BU538166 adenocarcinoma, cell line, breast DDX10.a 2590 to 3100 1 to 511       511/833
(61 %)
3 diff
(99.7 %id)
BU539354 adenocarcinoma, cell line, breast DDX10.a 2590 to 3252 1 to 662   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 662/662
(100 %)
1 diff
(99.9 %id)
BU539873 adenocarcinoma, cell line, breast DDX10.a 2590 to 3252 1 to 663   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 663/663
(100 %)
0 diff
(100 %id)
BG182726   DDX10.a 2591 to 3229 1 to 640       640/759
(84 %)
27 diff
(96.5 %id)
BU857408 adenocarcinoma, cell line, breast DDX10.a 2591 to 3252 1 to 662   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 662/662
(100 %)
5 diff
(99.3 %id)
AW051737 Kidney DDX10.a 2592 to 3260 671 to 2       670/671
(99 %)
0 diff
(100 %id)
BG211260   DDX10.a 2593 to 2827 17 to 252       236/252
(93 %)
6 diff
(97.7 %id)
BF934536 nervous_tumor DDX10.a 2601 to 2867 1 to 267       267/267
(100 %)
0 diff
(100 %id)
CA429323 Cell Line, Chondrosarcoma DDX10.a 2601 to 3252 668 to 17   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 652/652
(100 %)
0 diff
(100 %id)
CA429998 Cell Line, Chondrosarcoma DDX10.a 2601 to 3267 670 to 4       667/670
(99 %)
0 diff
(100 %id)
CA422482 cell lines, Chondrosarcoma DDX10.a 2607 to 3252 662 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 644/644
(100 %)
2 diff
(99.7 %id)
BU619096 Cell Line, Chondrosarcoma DDX10.a 2608 to 3252 661 to 17   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 645/645
(100 %)
0 diff
(100 %id)
AI766144 Kidney DDX10.a 2617 to 3259 643 to 1       643/644
(99 %)
6 diff
(99.1 %id)
CX866319 embryonic stem DDX10.a 2621 to 3267 662 to 15       648/662
(97 %)
0 diff
(100 %id)
BX283454 adenocarcinoma cell line, colon DDX10.a 2622 to 3133 1 to 512       512/512
(100 %)
0 diff
(100 %id)
BG821727 adenocarcinoma cell line, colon DDX10.a 2622 to 3254 1 to 633       633/649
(97 %)
1 diff
(99.9 %id)
BF759905 colon DDX10.a 2644 to 3021 387 to 11     Submitted on the opposite strand 377/387
(97 %)
0 diff
(100 %id)
AW276018 lung, two pooled squamous cell carcinomas DDX10.a 2670 to 3252 593 to 11   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 583/583
(100 %)
7 diff
(98.8 %id)
BF932821 nervous_tumor DDX10.a 2721 to 3103 383 to 1     Submitted on the opposite strand 383/383
(100 %)
1 diff
(99.8 %id)
CF123356 CNCAP(3)T-225 cell line, Prostate DDX10.a 2732 to 3250 8 to 526   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 519/526
(98 %)
6 diff
(98.9 %id)
TI_154183292   DDX10.a 2732 to 3250 69 to 587   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 519/519
(100 %)
2 diff
(99.7 %id)
BJ990679 hepatoblastoma DDX10.a 2742 to 3221 480 to 1       480/480
(100 %)
0 diff
(100 %id)
AA629601 lung, lung carcinoma DDX10.a 2746 to 3254 508 to 1       508/508
(100 %)
1 diff
(99.9 %id)
AA604373 adrenal adenoma, adrenal gland DDX10.a 2753 to 3254 502 to 1       502/502
(100 %)
0 diff
(100 %id)
CF129626 Chondrosarcoma Lung Metastasis cell lines, lung DDX10.a 2763 to 3252 1 to 490   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 490/490
(100 %)
0 diff
(100 %id)
TI_154191367   DDX10.a 2763 to 3252 51 to 540   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 490/490
(100 %)
0 diff
(100 %id)
DB550217 hippocampus DDX10.a 2772 to 3257 1 to 486     Submitted on the opposite strand 486/486
(100 %)
2 diff
(99.6 %id)
AI376353   DDX10.a 2781 to 3262 482 to 1       482/482
(100 %)
0 diff
(100 %id)
AW673988 cervix DDX10.a 2803 to 3252 469 to 20   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 450/450
(100 %)
2 diff
(99.6 %id)
AL043665.
matches multiple genes
testis DDX10.a 2816 to 3074 1 to 259     also hits gene PCBP3 259/259
(100 %)
0 diff
(100 %id)
AL043712 testis DDX10.a 2816 to 3193 378 to 1       378/379
(99 %)
0 diff
(100 %id)
BG978911 colon_normal DDX10.a 2818 to 3108 302 to 14       289/302
(95 %)
0 diff
(100 %id)
AI758573 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus DDX10.a 2868 to 3257 390 to 1       390/390
(100 %)
0 diff
(100 %id)
CB853825 lung, Primary Lung Epithelial Cells DDX10.a 3066 to 3252 237 to 51   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 187/187
(100 %)
0 diff
(100 %id)
AB209884 aorta endothelial cell DDX10.b 1 to 6707 1 to 6706 exact tiling clone,   6706/6706
(100 %)
8 diff
(99.9 %id)
AK296752 tongue, tumor tissue DDX10.c 1 to 2516 1 to 2573 I127V E128L N129E L130A P131D ... tiling clone,   2573/2573
(100 %)
5 diff
(99.9 %id)
DC345932 tongue, tumor tissue DDX10.c 1 to 524 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BQ431064 melanotic melanoma, skin DDX10.d 1 to 645 1 to 645 V17G K76E K148N tiling clone, AAA   645/935
(68 %)
6 diff
(99.4 %id)
BG402391 Kidney DDX10.e 1 to 569 1 to 563 W112L S113E D114* tiling clone,   563/888
(63 %)
17 diff
(98.1 %id)
DN995024 brain, whole brain DDX10.f 1 to 524 1 to 528 R90P L91F V92G T93* tiling clone,   528/528
(100 %)
8 diff
(98.5 %id)
BG184285   DDX10.g 1 to 732 1 to 738 S41* tiling clone,   738/808
(91 %)
19 diff
(97.7 %id)
BX493904   DDX10.h-u 1 to 513 1 to 513   tiling clone,   513/513
(100 %)
6 diff
(98.9 %id)
BX493905   DDX10.h-u 18 to 602 1 to 586 exact tiling clone,   586/586
(100 %)
9 diff
(98.5 %id)
DB222888 trachea DDX10.h-u 376 to 947 2 to 573 exact tiling clone, capped   572/572
(100 %)
1 diff
(99.9 %id)
BQ941659 large cell carcinoma, lung DDX10.i 1 to 853 1 to 856 exact tiling clone,   856/859
(99 %)
9 diff
(99.0 %id)
BX504601   DDX10.i 2 to 481 1 to 480 exact     480/480
(100 %)
1 diff
(99.8 %id)
BU934674 mixed (pool of 40 RNAs) DDX10.i 77 to 870 1 to 808 exact     808/822
(98 %)
33 diff
(96.0 %id)
BQ933317 large cell carcinoma, lung DDX10.i 82 to 859 1 to 786 exact     786/950
(82 %)
17 diff
(98.3 %id)
BU616591 Cell Line, Chondrosarcoma DDX10.i 165 to 869 717 to 14 G13X W24X tiling clone, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 704/704
(100 %)
1 diff
(99.9 %id)
DB481394 hippocampus DDX10.j-u 1 to 384 1 to 384 exact tiling clone,   384/435
(88 %)
2 diff
(99.6 %id)
AA809921 germinal center B cell DDX10.k-u 1 to 182 184 to 3 exact tiling clone,   182/184
(98 %)
0 diff
(100 %id)
BQ328259 leiomios Gene DDX10, variant not shown         This clone was ignored    
DB303933 brain Gene DDX10, variant not shown              
DA199582 brain Gene DDX10, variant not shown       capped      
BX508708   Gene DDX10, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j-u, .k-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI