To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene DCHS2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
38 supporting clones for gene DCHS2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AY354497   .a 1 to 8751 1 to 8751 exact tiling clone,   8751/8751
(100 %)
0 diff
(100 %id)
NM_017639.3   .a 1 to 8912 1 to 8912 exact RefSeq, AAA   8912/8912
(100 %)
0 diff
(100 %id)
AK095103 hippocampus .a 4664 to 8912 1 to 4249   tiling clone, available from FLJ,   4249/4249
(100 %)
1 diff
(100.0 %id)
DA310374 hippocampus .a 4665 to 5224 2 to 563   capped   562/564
(99 %)
2 diff
(99.7 %id)
BX647835 human testis .a 5025 to 8912 1 to 3888   available from DKFZ, AAA   3888/3888
(100 %)
4 diff
(99.9 %id)
BX506301   .a 5025 to 5630 1 to 606       606/606
(100 %)
1 diff
(99.9 %id)
AK000054 colon .a 5704 to 8912 1 to 3209   available from FLJ, AAA   3209/3209
(100 %)
5 diff
(99.9 %id)
AK225200 colon .a 5704 to 8912 1 to 3209   AAA   3209/3209
(100 %)
5 diff
(99.9 %id)
CN427057 embryonic stem cells, cell lines H1, H7, andH9 .a 6177 to 6821 645 to 1     Submitted on the opposite strand 645/645
(100 %)
0 diff
(100 %id)
DB059376 testis .a 6269 to 6808 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
BE009853 breast_normal .a 6406 to 6608 26 to 234       209/234
(89 %)
6 diff
(97.5 %id)
F06758 brain, total brain .a 6732 to 7113 382 to 1       382/382
(100 %)
0 diff
(100 %id)
F12969 brain, total brain .a 6763 to 7113 351 to 1       351/351
(100 %)
0 diff
(100 %id)
BX506302   .a 8346 to 8912 567 to 1       567/567
(100 %)
1 diff
(99.9 %id)
DB308440 hippocampus .a 8375 to 8912 539 to 1       539/539
(100 %)
1 diff
(99.9 %id)
DB302483 amygdala .b 1 to 559 1 to 559   tiling clone, Submitted on the opposite strand 559/559
(100 %)
1 diff
(99.9 %id)
NM_001142552.1   .b 1 to 5064 1 to 5064 exact RefSeq,   5064/5064
(100 %)
0 diff
(100 %id)
AK127704   .b 9 to 5058 1 to 5046 R15Q V190G Q593E A614V T620A ... tiling clone, available from FLJ,   5046/5052
(99 %)
17 diff
(99.7 %id)
DA724514   .b 11 to 501 2 to 494   capped   493/493
(100 %)
5 diff
(99.0 %id)
DA240588 brain .b 100 to 692 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DB238630 trachea .b 110 to 710 2 to 602   tiling clone, capped   601/601
(100 %)
0 diff
(100 %id)
TI_1968230231   .b 318 to 1324 87 to 1093       1007/1093
(92 %)
6 diff
(99.5 %id)
BC140919 Brain, cerebellum, PCR rescued clones .b 323 to 4663 1 to 4338 R15Q V190G G446C Q593E A614V ... tiling clone,   4338/4338
(100 %)
15 diff
(99.7 %id)
TI_1968235181   .b 912 to 1963 11 to 1058       1048/1265
(82 %)
13 diff
(99.0 %id)
TI_1968234563   .b 942 to 2172 1243 to 19       1225/1285
(95 %)
0 diff
(100 %id)
TI_1968234595   .b 1230 to 2433 1225 to 33       1193/1296
(92 %)
0 diff
(100 %id)
TI_1968234569   .b 1821 to 3009 1181 to 4       1178/1268
(92 %)
17 diff
(98.7 %id)
TI_1968234543   .b 3102 to 4186 1089 to 8       1082/1283
(84 %)
9 diff
(99.3 %id)
TI_1968234517   .b 3309 to 4464 1159 to 9   tiling clone,   1151/1281
(89 %)
15 diff
(98.9 %id)
DB324333   .b 4504 to 5070 568 to 1   tiling clone,   568/568
(100 %)
2 diff
(99.7 %id)
NM_001142553.1   .c 1 to 2552 2 to 2553 exact RefSeq,   2553/2553
(100 %)
0 diff
(100 %id)
DB288709 uterus .c 1 to 550 2 to 551   tiling clone, capped   550/550
(100 %)
0 diff
(100 %id)
AY354498   .c 444 to 2552 1 to 2109   tiling clone,   2109/2109
(100 %)
0 diff
(100 %id)
CD171613 testis .d 1 to 857 1 to 859   tiling clone,   859/859
(100 %)
6 diff
(99.4 %id)
BE336923.
matches multiple genes
adenocarcinoma cell line, ovary .d 461 to 1055 1 to 595     Suspected internal deletion, this clone was ignored, also hits gene UBFD1 595/595
(100 %)
0 diff
(100 %id)
BE898809 adenocarcinoma cell line, ovary .d 479 to 1245 1 to 762   tiling clone,   762/765
(99 %)
8 diff
(99.0 %id)
BE004274 breast_normal .d 850 to 1228 1 to 378       378/386
(97 %)
6 diff
(98.5 %id)
BE208380.
matches multiple genes
adenocarcinoma cell line, ovary .d 1064 to 1506 443 to 1   tiling clone, also hits gene UBFD1 443/443
(100 %)
0 diff
(100 %id)
AI184027 lung .d 1130 to 1528 401 to 1       401/401
(100 %)
7 diff
(98.3 %id)
AW468939 pooled .d 1147 to 1528 384 to 1   tiling clone,   384/386
(99 %)
2 diff
(99.5 %id)
DB067825 testis .e 1 to 568 2 to 569 exact tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C