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Gene DCDC1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
43 supporting clones for gene DCDC1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK128035 testis DCDC1.a 1 to 4750 2 to 4842 C46S T47V E48H I49T L50E ... tiling clone, available from FLJ,   4770/4842
(98 %)
21 diff
(99.6 %id)
DB061478 testis DCDC1.a 1 to 560 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
BF365119 nervous_normal DCDC1.a 2367 to 2569 16 to 215   tiling clone,   200/215
(93 %)
6 diff
(97.3 %id)
DB339307 testis DCDC1.a 4220 to 4750 531 to 1   tiling clone,   531/531
(100 %)
4 diff
(99.3 %id)
BX116244 pooled DCDC1.a 4363 to 4757 1 to 395   tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 395/396
(99 %)
3 diff
(99.3 %id)
AW340116 pooled DCDC1.a 4395 to 4759 367 to 3   tiling clone,   365/367
(99 %)
0 diff
(100 %id)
AI243215 pooled DCDC1.a 4475 to 4759 287 to 3   tiling clone,   285/287
(99 %)
0 diff
(100 %id)
BX647348 Liver DCDC1.b 1 to 4693 1 to 4692 P24L V304A N560D tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 4692/4692
(100 %)
7 diff
(99.9 %id)
R54186 whole brain DCDC1.b 2588 to 3095 517 to 1   tiling clone, Submitted on the opposite strand 517/517
(100 %)
22 diff
(95.8 %id)
BX117620 liver and spleen DCDC1.b 3953 to 4593 1 to 641   tiling clone,   641/641
(100 %)
0 diff
(100 %id)
AA005095 liver and spleen DCDC1.b 3953 to 4282 1 to 329   fully sequenced,   329/329
(100 %)
3 diff
(99.1 %id)
AI056882 liver and spleen DCDC1.b 4074 to 4666 605 to 13   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 593/593
(100 %)
0 diff
(100 %id)
AA004887 liver and spleen DCDC1.b 4252 to 4659 406 to 1   fully sequenced,   406/406
(100 %)
2 diff
(99.6 %id)
AA833549   DCDC1.b 4381 to 4496 116 to 1       116/116
(100 %)
0 diff
(100 %id)
AA680369 liver and spleen DCDC1.b 4453 to 4644 191 to 1       191/191
(100 %)
3 diff
(98.5 %id)
BF851768 lung_normal DCDC1.b 5090 to 5527 453 to 5   tiling clone, Submitted on the opposite strand 449/453
(99 %)
0 diff
(100 %id)
CV569749 cornea, eye DCDC1.b 5513 to 6035 1 to 523   tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 523/523
(100 %)
0 diff
(100 %id)
W04903 liver and spleen DCDC1.b 5603 to 6032 1 to 438       438/448
(97 %)
16 diff
(96.5 %id)
AI150472   DCDC1.b 5739 to 6036 300 to 3   tiling clone,   298/300
(99 %)
0 diff
(100 %id)
T55506 fetal spleen, Spleen DCDC1.b 5740 to 6032 1 to 293   fully sequenced,   293/293
(100 %)
5 diff
(98.3 %id)
T55429 fetal spleen, Spleen DCDC1.b 5782 to 6023 251 to 1   fully sequenced,   251/251
(100 %)
9 diff
(96.5 %id)
AK126066 testis DCDC1.c 1 to 3979 2 to 3980 L61R tiling clone, available from FLJ,   3980/3980
(100 %)
3 diff
(100.0 %id)
DB090201 testis DCDC1.c 1 to 544 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
CD693370 normal nasopharynx DCDC1.c 71 to 449 42 to 419       378/419
(90 %)
8 diff
(98.1 %id)
AL713024 human skeletal muscle DCDC1.c 114 to 571 73 to 530       458/530
(86 %)
2 diff
(99.7 %id)
DB341363 testis DCDC1.c 3451 to 3979 529 to 1       529/529
(100 %)
0 diff
(100 %id)
AB040926   DCDC1.d 1 to 4672 95 to 4768 P2D tiling clone, available from KIAA,   4674/4768
(98 %)
8 diff
(99.9 %id)
CN429222 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 DCDC1.d 370 to 1043 1 to 674       674/674
(100 %)
0 diff
(100 %id)
FN131014 breast carcinoma DCDC1.d 1737 to 1841 107 to 1   tiling clone, Submitted on the opposite strand 107/109
(98 %)
4 diff
(96.4 %id)
AI040110 liver and spleen DCDC1.d 2871 to 3299 428 to 1       428/428
(100 %)
1 diff
(99.8 %id)
DB528022 testis DCDC1.d 2880 to 3338 1 to 459   AAA Submitted on the opposite strand 459/459
(100 %)
7 diff
(98.5 %id)
AY247970 brain DCDC1.e 1 to 1705 1 to 1705 V192A tiling clone, AAA   1705/1705
(100 %)
3 diff
(99.9 %id)
NM_181807.2   DCDC1.e 1 to 1706 1 to 1706 exact RefSeq,   1706/1706
(100 %)
0 diff
(100 %id)
AA954541 pooled DCDC1.e 1329 to 1706 383 to 6   tiling clone,   378/383
(98 %)
0 diff
(100 %id)
CV574283 cornea, eye DCDC1.f 1 to 626 1 to 626 L26P tiling clone,   626/626
(100 %)
1 diff
(99.9 %id)
BF957112 nervous_normal DCDC1.g 1 to 432 8 to 439   tiling clone,   432/439
(98 %)
10 diff
(97.8 %id)
BF365121 nervous_normal DCDC1.g 72 to 641 567 to 1   tiling clone,   567/567
(100 %)
4 diff
(99.3 %id)
BX097338   DCDC1.h 1 to 472 1 to 472 exact tiling clone, AAA   472/472
(100 %)
0 diff
(100 %id)
AA846321   DCDC1.h 92 to 472 384 to 4       381/384
(99 %)
0 diff
(100 %id)
AI684432 pooled DCDC1.h 269 to 472 207 to 4       204/207
(98 %)
0 diff
(100 %id)
CR748186 pooled DCDC1.i 1 to 328 7 to 334 L2X L3X T12H P13T L14F ... tiling clone,   334/341
(97 %)
13 diff
(96.2 %id)
AA970841 pooled DCDC1.i 303 to 696 394 to 1   tiling clone,   394/394
(100 %)
2 diff
(99.5 %id)
DB636417 testis DCDC1.j-u 1 to 654 1 to 652 exact tiling clone,   652/652
(100 %)
5 diff
(99.3 %id)
FN165690 breast carcinoma DCDC1.k-u 1 to 61 1 to 59       59/60
(98 %)
3 diff
(95.0 %id)
CV571757 cornea, eye DCDC1.k-u 5 to 539 1 to 535 exact tiling clone,   535/535
(100 %)
0 diff
(100 %id)
AW090172 brain, tumor, 5 pooled (see description) Gene DCDC1, variant not shown         This clone was ignored    
DB268571 uterus Gene DCDC1, variant not shown       capped This clone was ignored    
DB351900 uterus Gene DCDC1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C