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Gene DBR1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
155 supporting clones for gene DBR1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA037159   .a 1 to 805 9 to 809   capped   808/809
(99 %)
13 diff
(98.4 %id)
AU280639   .a 1 to 546 8 to 554       554/554
(100 %)
2 diff
(99.7 %id)
DA299447 hippocampus .a 1 to 581 8 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA618143   .a 1 to 565 8 to 575   capped   574/574
(100 %)
3 diff
(99.5 %id)
BP309797 brain .a 1 to 579 6 to 584   tiling clone,   584/584
(100 %)
1 diff
(99.9 %id)
DA262438 caudate nucleus .a 1 to 577 6 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA471643   .a 1 to 558 6 to 572   capped   571/571
(100 %)
10 diff
(98.3 %id)
DA472705   .a 1 to 518 6 to 524   capped   523/523
(100 %)
2 diff
(99.7 %id)
DA019892   .a 1 to 577 5 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DB032429 testis .a 1 to 581 5 to 584   capped   583/592
(98 %)
1 diff
(99.9 %id)
DA053180   .a 1 to 539 3 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA481650   .a 1 to 529 2 to 532   capped   531/531
(100 %)
2 diff
(99.7 %id)
DA666992   .a 1 to 547 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA787165 brain .a 1 to 597 2 to 598   capped   597/597
(100 %)
2 diff
(99.7 %id)
DB198193 trachea .a 1 to 575 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
BP363712 lung .a 3 to 581 1 to 579       579/581
(99 %)
7 diff
(98.8 %id)
DA896832 skeletal muscle .a 4 to 566 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
CN363282 embryonic stem cells, DMSO-treated H9 cellline .a 6 to 715 8 to 717       710/717
(99 %)
6 diff
(99.2 %id)
BU183009 melanotic melanoma, skin .a 6 to 805 19 to 826       808/826
(97 %)
15 diff
(98.2 %id)
BE262663 brain, neuroblastoma .a 9 to 651 21 to 663       643/664
(96 %)
13 diff
(98.1 %id)
BI199059 brain, neuroblastoma .a 10 to 574 1 to 576       576/641
(89 %)
16 diff
(97.6 %id)
BC009472 Brain, neuroblastoma .a 11 to 2243 1 to 2233 exact available from MGC, AAA   2233/2233
(100 %)
4 diff
(99.9 %id)
CN363284 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 14 to 623 18 to 627       610/627
(97 %)
6 diff
(99.1 %id)
BU156548 eye, retinoblastoma .a 14 to 581 1 to 567       567/788
(71 %)
10 diff
(98.8 %id)
BG248897 hypernephroma, cell line, Kidney .a 22 to 416 1 to 400       400/840
(47 %)
14 diff
(98.4 %id)
BX646354   .a 23 to 528 38 to 543       506/543
(93 %)
6 diff
(98.9 %id)
BE312610 brain, neuroblastoma .a 30 to 693 1 to 662       662/687
(96 %)
8 diff
(98.9 %id)
CX757964 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 55 to 845 1 to 783     Submitted on the opposite strand 786/789
(99 %)
10 diff
(98.8 %id)
CV027615 mixed .a 93 to 735 1 to 641       641/644
(99 %)
4 diff
(99.4 %id)
TI_1948095328   .a 93 to 812 128 to 845       718/1343
(53 %)
19 diff
(98.6 %id)
TI_1948095008   .a 94 to 740 134 to 785       652/1410
(46 %)
43 diff
(97.0 %id)
BM847642 myeloma .a 182 to 691 1 to 510       510/510
(100 %)
0 diff
(100 %id)
DA567737   .a 192 to 473 2 to 283   capped   282/282
(100 %)
0 diff
(100 %id)
DA013747 adrenal gland .a 290 to 535 326 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
AF180919   .a 290 to 2243 306 to 2259 P450T S451I V452G E453R P454S ... tiling clone, AAA   2259/2259
(100 %)
10 diff
(99.6 %id)
DA133544 alzheimer cortex .a 290 to 532 333 to 575   capped   574/574
(100 %)
3 diff
(99.5 %id)
DA156804 amygdala .a 290 to 527 331 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DA304180 hippocampus .a 290 to 440 337 to 487   capped   486/486
(100 %)
4 diff
(99.2 %id)
CN363283 embryonic stem cells, cell lines H1, H7, andH9 .a 290 to 580 304 to 594       594/594
(100 %)
1 diff
(99.9 %id)
CN363285 embryonic stem cells, cell lines H1, H7, andH9 .a 290 to 553 341 to 604       587/604
(97 %)
6 diff
(99.1 %id)
AL526134 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 290 to 862 315 to 888       888/888
(100 %)
12 diff
(98.7 %id)
DA433538 tongue, tumor tissue .a 290 to 649 332 to 698   capped   697/710
(98 %)
13 diff
(98.2 %id)
DA444655 tongue, tumor tissue .a 290 to 547 326 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DA448719 tongue, tumor tissue .a 290 to 522 334 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA476322   .a 290 to 473 334 to 517   capped   516/516
(100 %)
1 diff
(99.9 %id)
DA478727   .a 290 to 548 319 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
AL702928 human skeletal muscle .a 290 to 687 354 to 751       751/751
(100 %)
3 diff
(99.7 %id)
BX475137   .a 290 to 458 330 to 498       498/498
(100 %)
6 diff
(98.8 %id)
BX475142   .a 290 to 534 330 to 574       574/574
(100 %)
3 diff
(99.5 %id)
DA490923 brain .a 290 to 552 319 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA508423 brain .a 290 to 530 347 to 587   capped   586/586
(100 %)
2 diff
(99.7 %id)
DA514041 brain .a 290 to 447 305 to 462   capped   461/461
(100 %)
2 diff
(99.6 %id)
DA516842 brain .a 290 to 413 347 to 470   capped   469/469
(100 %)
2 diff
(99.6 %id)
DA521865 brain .a 290 to 526 329 to 565   capped   564/564
(100 %)
3 diff
(99.5 %id)
DA525398 brain .a 290 to 519 334 to 563   capped   562/563
(99 %)
3 diff
(99.5 %id)
AV683359 hepatocellular carcinoma .a 290 to 307 329 to 346       346/354
(97 %)
4 diff
(98.9 %id)
DB466617 hippocampus .a 290 to 392 347 to 449       449/449
(100 %)
4 diff
(99.2 %id)
BJ992315 hepatoblastoma .a 290 to 495 333 to 538       538/538
(100 %)
1 diff
(99.9 %id)
BP244614 Kidney .a 290 to 537 334 to 582       582/582
(100 %)
3 diff
(99.5 %id)
AA159840 Pancreas .a 290 to 382 309 to 408       408/411
(99 %)
10 diff
(97.6 %id)
BU166460 melanotic melanoma, skin .a 290 to 657 376 to 753       718/932
(77 %)
21 diff
(97.8 %id)
CF994204 Human Placenta, placenta .a 290 to 651 356 to 710       683/725
(94 %)
17 diff
(97.7 %id)
DA631361 Kidney .a 290 to 536 330 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA643268   .a 290 to 500 330 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DA644635   .a 290 to 546 330 to 587   capped   586/586
(100 %)
2 diff
(99.7 %id)
DA647684   .a 290 to 440 332 to 482   capped   481/481
(100 %)
0 diff
(100 %id)
DA649538   .a 290 to 490 334 to 534   capped   533/533
(100 %)
6 diff
(98.9 %id)
DA656772   .a 290 to 430 346 to 486   capped   485/485
(100 %)
1 diff
(99.8 %id)
DA661583   .a 290 to 551 318 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA662802   .a 290 to 484 350 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
NM_016216.3   .a 290 to 2628 352 to 2690 exact RefSeq,   2690/2690
(100 %)
0 diff
(100 %id)
DA692100   .a 290 to 543 332 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DA714537   .a 290 to 510 346 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA782317 brain .a 290 to 525 330 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA843807 placenta .a 290 to 543 324 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA902380   .a 290 to 553 325 to 588   capped   587/587
(100 %)
2 diff
(99.7 %id)
DA941764 Spleen .a 290 to 518 335 to 563   capped   562/562
(100 %)
4 diff
(99.3 %id)
DB002215 breast, tumor tissue .a 290 to 442 331 to 483   capped   482/482
(100 %)
4 diff
(99.2 %id)
DN991877 brain, whole brain .a 290 to 648 313 to 671       671/671
(100 %)
3 diff
(99.6 %id)
DN992814 brain, whole brain .a 290 to 596 319 to 625       617/625
(98 %)
6 diff
(99.1 %id)
BM150284 leukopheresis .a 290 to 604 334 to 648       648/648
(100 %)
4 diff
(99.4 %id)
DB116999 thymus .a 290 to 495 334 to 539   capped   538/538
(100 %)
2 diff
(99.7 %id)
DB118786 thymus .a 290 to 494 340 to 544   capped   543/570
(95 %)
8 diff
(98.6 %id)
DB133482 thymus .a 290 to 522 331 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
DB211113 trachea .a 290 to 500 336 to 546   capped   545/545
(100 %)
6 diff
(98.9 %id)
DB269180 uterus .a 290 to 310 330 to 350   capped   349/349
(100 %)
0 diff
(100 %id)
ES308237 beard hair, skin .a 292 to 447 1 to 154       154/154
(100 %)
2 diff
(98.8 %id)
BI256686 cervical carcinoma cell line, cervix .a 308 to 1030 13 to 741       729/785
(92 %)
20 diff
(97.5 %id)
BE967628 brain .a 402 to 1031 1 to 621       623/857
(72 %)
17 diff
(98.1 %id)
BG035795 adenocarcinoma, cell line, Liver .a 427 to 1187 1 to 762       762/957
(79 %)
24 diff
(97.5 %id)
BG254149 adenocarcinoma, cell line, Prostate .a 531 to 1242 1 to 719       719/993
(72 %)
14 diff
(98.6 %id)
CX872953 embryonic stem .a 623 to 1459 1 to 837       837/837
(100 %)
2 diff
(99.8 %id)
W53026 Pancreas, pancreatic islet .a 682 to 1067 1 to 387       387/388
(99 %)
6 diff
(98.5 %id)
BX390185 Neuroblastoma Cot 25-normalized .a 713 to 983 1 to 275   AAA   275/308
(89 %)
9 diff
(97.1 %id)
BU175785 embryonal carcinoma, cell line, testis .a 741 to 1570 14 to 857       844/861
(98 %)
37 diff
(95.8 %id)
BE093965 breast .a 787 to 1065 16 to 295       280/298
(93 %)
10 diff
(96.7 %id)
BU145838 ductal carcinoma, cell line, Pancreas .a 795 to 1397 1 to 609       609/731
(83 %)
18 diff
(97.6 %id)
BQ686002 ductal carcinoma, cell line, Pancreas .a 795 to 1732 1 to 938       938/938
(100 %)
20 diff
(97.9 %id)
TI_1948095009   .a 882 to 1726 971 to 125       847/1318
(64 %)
21 diff
(98.5 %id)
CR990178 T-Lymphocytes .a 885 to 1482 1 to 599       599/599
(100 %)
3 diff
(99.5 %id)
TI_1948095329   .a 887 to 1726 967 to 129       839/1336
(62 %)
21 diff
(98.5 %id)
BE004620 breast_normal .a 892 to 1052 1 to 165       165/165
(100 %)
10 diff
(94.0 %id)
TI_1948094866   .a 955 to 1726 907 to 127       781/1350
(57 %)
9 diff
(99.4 %id)
BE764380 nervous_tumor .a 1005 to 1540 539 to 1       539/539
(100 %)
11 diff
(98.0 %id)
BG741687 skin .a 1010 to 1662 1 to 654       654/656
(99 %)
6 diff
(99.1 %id)
BG741688 skin .a 1010 to 1678 1 to 669       669/670
(99 %)
2 diff
(99.8 %id)
TI_1948095172   .a 1025 to 1726 836 to 127       710/1433
(49 %)
0 diff
(100 %id)
CD691655 normal nasopharynx .a 1106 to 1662 22 to 578       557/578
(96 %)
6 diff
(99.0 %id)
AW992549 breast_normal .a 1115 to 1337 9 to 230       222/230
(96 %)
8 diff
(96.6 %id)
CR626522 Placenta Cot 25-normalized .a 1186 to 2249 1 to 1064   tiling clone,   1064/1064
(100 %)
0 diff
(100 %id)
AL547833 placenta, Placenta Cot 25-normalized .a 1186 to 2052 1 to 864       864/864
(100 %)
5 diff
(99.5 %id)
AA069408 pineal gland .a 1222 to 1388 1 to 167       167/167
(100 %)
0 diff
(100 %id)
FN129936 breast carcinoma .a 1244 to 1329 85 to 1     Submitted on the opposite strand 85/85
(100 %)
3 diff
(96.5 %id)
AL562620 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1294 to 2237 947 to 1       947/947
(100 %)
53 diff
(94.5 %id)
R66803 placenta .a 1299 to 1676 13 to 393       381/455
(83 %)
10 diff
(97.9 %id)
BE002445 breast_normal .a 1368 to 1640 12 to 287       276/287
(96 %)
15 diff
(94.8 %id)
BI063067 uterus_tumor .a 1374 to 2043 1 to 670       670/670
(100 %)
3 diff
(99.6 %id)
BE764389 nervous_tumor .a 1379 to 1534 158 to 4       155/158
(98 %)
0 diff
(100 %id)
BE764429 nervous_tumor .a 1379 to 1549 172 to 3       170/172
(98 %)
0 diff
(100 %id)
FN086759 breast carcinoma .a 1384 to 1475 1 to 88       88/89
(98 %)
4 diff
(95.6 %id)
T80130 whole brain .a 1399 to 1701 1 to 306       306/309
(99 %)
4 diff
(98.8 %id)
CB054300 brain, glioblastoma (pooled) .a 1406 to 1853 4 to 451   fully sequenced,   448/451
(99 %)
7 diff
(98.5 %id)
W03379 melanocyte .a 1539 to 1895 1 to 357   fully sequenced,   357/357
(100 %)
2 diff
(99.5 %id)
W03380 melanocyte .a 1539 to 1990 1 to 452       452/452
(100 %)
3 diff
(99.4 %id)
BX105644 melanocyte .a 1540 to 2043 1 to 504       504/504
(100 %)
3 diff
(99.5 %id)
TI_57186551   .a 1602 to 2472 55 to 922       868/872
(99 %)
26 diff
(97.1 %id)
BI856069 breast, mammary adenocarcinoma, cell line .a 1603 to 2472 1 to 867       867/871
(99 %)
26 diff
(97.1 %id)
BE536784 cervix .a 1606 to 2240 1 to 629       629/924
(68 %)
19 diff
(98.0 %id)
CA308017 Alveolar Macrophage, lung .a 1623 to 2243 639 to 19   AAA   621/621
(100 %)
3 diff
(99.6 %id)
BF570798 melanotic melanoma, high MDR, skin .a 1683 to 1951 1 to 266       266/266
(100 %)
10 diff
(96.3 %id)
CA453407 mixed (pool of 40 RNAs) .a 1699 to 2248 1 to 550       550/859
(64 %)
11 diff
(98.8 %id)
H85388 eye, retina .a 1763 to 2187 1 to 434       434/448
(96 %)
7 diff
(98.5 %id)
CB054299 brain, glioblastoma (pooled) .a 1823 to 2243 469 to 49   fully sequenced, AAA   421/421
(100 %)
2 diff
(99.6 %id)
AA765401 germinal center B cell .a 1848 to 2244 404 to 9       396/404
(98 %)
0 diff
(100 %id)
AW390911 stomach .a 1851 to 2103 267 to 15       253/267
(94 %)
0 diff
(100 %id)
N67797 melanocyte .a 1865 to 2243 387 to 1   fully sequenced,   387/387
(100 %)
4 diff
(99.0 %id)
BX369226 Placenta Cot 25-normalized .a 1927 to 2249 1 to 323       323/329
(98 %)
3 diff
(99.1 %id)
R67903 placenta .a 1943 to 2240 315 to 9       307/368
(83 %)
0 diff
(100 %id)
W21451 lung .a 1956 to 2090 55 to 189       171/189
(90 %)
16 diff
(91.6 %id)
AA765829 germinal center B cell .a 1968 to 2244 285 to 9       277/285
(97 %)
0 diff
(100 %id)
AW837997 leiomios .a 2017 to 2403 12 to 395       384/395
(97 %)
9 diff
(97.8 %id)
AW837993 leiomios .a 2018 to 2403 9 to 392       384/392
(97 %)
11 diff
(97.2 %id)
AW838011 leiomios .a 2024 to 2403 1 to 378       378/378
(100 %)
6 diff
(98.5 %id)
AW837996 leiomios .a 2031 to 2403 1 to 370       370/370
(100 %)
3 diff
(99.2 %id)
AW838012 leiomios .a 2031 to 2403 1 to 372       372/372
(100 %)
4 diff
(99.0 %id)
CD677175 eye, Trabecular meshwork .a 2038 to 2595 1 to 558   tiling clone,   558/558
(100 %)
0 diff
(100 %id)
AA069435 pineal gland .a 2102 to 2530 429 to 1       429/429
(100 %)
3 diff
(99.4 %id)
W52118 Pancreas, pancreatic islet .a 2168 to 2557 402 to 13   AAA   390/390
(100 %)
4 diff
(99.0 %id)
DB533462 hippocampus .a 2189 to 2600 1 to 412     Submitted on the opposite strand 412/413
(99 %)
2 diff
(99.6 %id)
AI457469 colon, moderately-differentiated adenocarcinoma .a 2218 to 2601 383 to 1       383/383
(100 %)
2 diff
(99.5 %id)
AA954977 pooled .a 2235 to 2604 373 to 4       370/373
(99 %)
0 diff
(100 %id)
BF987317 placenta_normal .a 2305 to 2628 1 to 325   tiling clone,   325/325
(100 %)
3 diff
(99.1 %id)
BF990720 placenta_normal .a 2305 to 2628 1 to 325       325/325
(100 %)
3 diff
(99.1 %id)
BE930572 placenta_normal .a 2307 to 2677 25 to 395   tiling clone,   371/395
(93 %)
6 diff
(98.5 %id)
R39354 whole brain .a 2324 to 2601 294 to 11   AAA   284/347
(81 %)
7 diff
(98.0 %id)
N93410 lung .a 2428 to 2602 176 to 1       176/176
(100 %)
4 diff
(97.8 %id)
AA876825 metastatic prostate bone lesion .a 2459 to 2604 146 to 1       146/151
(96 %)
4 diff
(97.4 %id)
H84771 eye, retina .a 2498 to 2583 86 to 1       86/86
(100 %)
0 diff
(100 %id)
AK094147   .b 1 to 2188 3 to 2190 Y100* tiling clone, available from FLJ,   2190/2190
(100 %)
8 diff
(99.7 %id)
DA026176   .b 1 to 569 3 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
AK000116 colon .c 1 to 2140 1 to 2140 N76S tiling clone, available from FLJ, AAA   2140/2140
(100 %)
8 diff
(99.7 %id)
BP220776 colon .c 1 to 572 1 to 572       572/572
(100 %)
10 diff
(98.3 %id)
DA129223 alzheimer cortex Gene DBR1, variant not shown       capped Suspected internal deletion, this clone was ignored    
AV658989 corresponding non cancerous liver tissue Gene DBR1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BE242847 leukopheresis Gene DBR1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C