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Gene RRP1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
363 supporting clones for gene RRP1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CR594938 Neuroblastoma Cot 25-normalized .a 1 to 1800 1 to 1800 exact tiling clone,   1800/1800
(100 %)
0 diff
(100 %id)
DA275615 corpus callosum .a 24 to 575 2 to 553   capped   552/553
(99 %)
2 diff
(99.7 %id)
DA908683   .a 24 to 573 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
NM_003683.5   .a 25 to 1831 1 to 1807 exact RefSeq, AAA   1807/1807
(100 %)
0 diff
(100 %id)
DA846961 placenta .a 25 to 504 92 to 572   capped   481/571
(84 %)
6 diff
(99.0 %id)
AL525993 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 31 to 960 33 to 958   fully sequenced,   926/958
(96 %)
15 diff
(98.5 %id)
DA911920   .a 34 to 592 2 to 561   capped   560/560
(100 %)
3 diff
(99.5 %id)
DA349496 substantia nigra .a 35 to 594 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BG829556 epithelioid carcinoma cell line, Pancreas .a 37 to 670 1 to 637       637/939
(67 %)
9 diff
(99.1 %id)
BG829711 epithelioid carcinoma cell line, Pancreas .a 37 to 629 1 to 598       598/837
(71 %)
15 diff
(98.3 %id)
BI160255 epithelioid carcinoma cell line, Pancreas .a 37 to 704 1 to 675       675/676
(99 %)
18 diff
(97.4 %id)
BG506035 embryonal carcinoma, testis .a 38 to 742 1 to 705       705/749
(94 %)
16 diff
(97.9 %id)
DA133999 alzheimer cortex .a 39 to 595 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA430462 colon .a 40 to 609 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA927886 small intestine .a 41 to 622 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
DB190099 lung, tumor tissue .a 41 to 623 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
AL531993 brain, fetal liver, Liver, neuroblastoma cells .a 50 to 960 1 to 905   fully sequenced,   905/905
(100 %)
7 diff
(99.3 %id)
AL531939 brain, fetal liver, Liver, neuroblastoma cells .a 50 to 960 1 to 907   fully sequenced,   907/907
(100 %)
7 diff
(99.3 %id)
BM463832 leiomyosarcoma, uterus .a 50 to 928 1 to 880       880/983
(89 %)
14 diff
(98.6 %id)
CR603071 fetal liver .a 51 to 1793 1 to 1743 exact     1743/1743
(100 %)
0 diff
(100 %id)
CR620655 fetal liver .a 51 to 1794 1 to 1744 exact     1744/1744
(100 %)
0 diff
(100 %id)
DB010058 colon, tumor tissue .a 51 to 518 2 to 469   capped   468/468
(100 %)
0 diff
(100 %id)
DN998796 bone marrow .a 54 to 681 8 to 634       627/634
(98 %)
6 diff
(99.1 %id)
BG391799 embryonal carcinoma, cell line, testis .a 55 to 669 1 to 619       617/912
(67 %)
10 diff
(99.0 %id)
AL520799 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 56 to 907 1 to 851       851/851
(100 %)
5 diff
(99.5 %id)
BE791685 lung, small cell carcinoma .a 57 to 734 24 to 701       678/705
(96 %)
9 diff
(98.8 %id)
BE790622 lung, small cell carcinoma .a 57 to 734 21 to 696       676/698
(96 %)
12 diff
(98.3 %id)
DA197070 alzheimer cortex .a 58 to 575 2 to 519   capped   518/518
(100 %)
1 diff
(99.9 %id)
BP355408   .a 59 to 640 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA513684 brain .a 60 to 538 2 to 480   capped   479/482
(99 %)
1 diff
(99.8 %id)
DB037138 testis .a 60 to 629 2 to 573   capped   572/572
(100 %)
3 diff
(99.5 %id)
DA002195   .a 61 to 628 2 to 570   capped   569/569
(100 %)
4 diff
(99.3 %id)
AU099571   .a 63 to 362 1 to 300       300/300
(100 %)
3 diff
(99.0 %id)
BP264743 umbilical vein .a 63 to 631 1 to 569       569/569
(100 %)
4 diff
(99.3 %id)
TI_57243284   .a 63 to 907 23 to 880       858/880
(97 %)
26 diff
(97.1 %id)
AK223185 Pancreas .a 64 to 1827 1 to 1764 I194V K326R AAA   1764/1764
(100 %)
5 diff
(99.8 %id)
BP323864 Pancreas .a 64 to 647 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BP354134   .a 64 to 647 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BP376734 uterus .a 64 to 606 8 to 550       543/550
(98 %)
6 diff
(99.0 %id)
DA038953   .a 65 to 619 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA207721 brain .a 65 to 630 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
AU105919   .a 65 to 114 1 to 50       50/50
(100 %)
2 diff
(96.0 %id)
BP206195 coronary artery .a 65 to 644 1 to 580       580/580
(100 %)
5 diff
(99.2 %id)
BP234594 coronary artery .a 65 to 657 1 to 593       593/593
(100 %)
1 diff
(99.9 %id)
BP246421 Kidney .a 65 to 648 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BP280086   .a 65 to 646 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
CB106622 Liver .a 65 to 516 1 to 452       452/452
(100 %)
2 diff
(99.6 %id)
BP351473   .a 65 to 645 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA000791   .a 66 to 531 2 to 467   capped   466/466
(100 %)
0 diff
(100 %id)
DA007761   .a 66 to 612 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA020140   .a 66 to 630 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA038332   .a 66 to 634 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA041468 bladder .a 66 to 631 2 to 570   capped   569/569
(100 %)
3 diff
(99.5 %id)
DA070306 cerebellum .a 66 to 634 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA112059 cerebellum .a 66 to 608 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA252048 caudate nucleus .a 66 to 635 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA303696 hippocampus .a 66 to 611 2 to 547   capped   546/546
(100 %)
2 diff
(99.7 %id)
DA347589 substantia nigra .a 66 to 631 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA360689 subthalamic nucleus .a 66 to 621 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA419621 cord Blood .a 66 to 623 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DA440130 tongue, tumor tissue .a 66 to 656 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
DA539358 Kidney .a 66 to 650 2 to 587   capped   586/586
(100 %)
3 diff
(99.5 %id)
DA567406   .a 66 to 610 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DA592984 lung .a 66 to 606 2 to 543   capped   542/542
(100 %)
3 diff
(99.5 %id)
DA596409   .a 66 to 589 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
DA612601   .a 66 to 652 2 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
DA690263   .a 66 to 637 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA710301   .a 66 to 593 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
DA794432 brain .a 66 to 558 2 to 495   capped   494/494
(100 %)
2 diff
(99.6 %id)
DA909461   .a 66 to 620 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA911230   .a 66 to 639 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA931777 Spleen .a 66 to 518 2 to 454   capped   453/453
(100 %)
0 diff
(100 %id)
DA932080 Spleen .a 66 to 629 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB009288 colon, tumor tissue .a 66 to 619 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB011190 colon, tumor tissue .a 66 to 575 2 to 511   capped   510/510
(100 %)
0 diff
(100 %id)
DB081792 testis .a 66 to 558 2 to 495   capped   494/494
(100 %)
1 diff
(99.8 %id)
DB096792 testis .a 66 to 648 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DB104229 thymus .a 66 to 575 2 to 511   capped   510/510
(100 %)
2 diff
(99.7 %id)
DB148834 thymus .a 66 to 628 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
BP365314 lung .a 66 to 647 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DB243915 stomach, tumor tissue .a 66 to 613 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DB244156 uterus, tumor tissue .a 66 to 622 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB265658 uterus .a 66 to 659 2 to 595   capped   594/594
(100 %)
2 diff
(99.7 %id)
DB287056 uterus .a 66 to 615 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA323381 hippocampus .a 67 to 334 2 to 269   capped   268/268
(100 %)
0 diff
(100 %id)
DA561202 heart .a 67 to 622 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA689088   .a 67 to 606 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DB024722 testis .a 67 to 620 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB056109 testis .a 67 to 626 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BP193525 brain .a 68 to 640 1 to 575       575/582
(98 %)
6 diff
(99.0 %id)
AK223215 Spleen .a 68 to 1766 1 to 1699 I194V K326R     1699/1699
(100 %)
5 diff
(99.8 %id)
AK313116 colon .a 68 to 1503 1 to 1436 Q262*     1436/1436
(100 %)
2 diff
(99.9 %id)
BP245244 Kidney .a 68 to 649 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP272710   .a 68 to 641 1 to 574       574/574
(100 %)
7 diff
(98.8 %id)
AU105922   .a 68 to 117 1 to 50       50/50
(100 %)
1 diff
(98.0 %id)
BP272821   .a 68 to 627 1 to 560       560/560
(100 %)
7 diff
(98.8 %id)
BP272822   .a 68 to 621 1 to 554       554/555
(99 %)
8 diff
(98.6 %id)
CB140585 Liver .a 68 to 512 1 to 445       445/445
(100 %)
1 diff
(99.8 %id)
BP299706   .a 68 to 647 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BP305590   .a 68 to 700 1 to 632       632/632
(100 %)
4 diff
(99.4 %id)
BM837997 Ascites, stomach .a 68 to 648 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BM836757 Ascites, stomach .a 68 to 524 1 to 457       457/457
(100 %)
1 diff
(99.8 %id)
BM827383 stomach .a 68 to 311 1 to 245       245/245
(100 %)
7 diff
(97.2 %id)
BP339967 Spleen .a 68 to 647 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DA001443   .a 69 to 572 2 to 506   capped   505/505
(100 %)
1 diff
(99.9 %id)
DA043241 bladder .a 69 to 640 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA045483 bladder .a 69 to 639 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA049509   .a 69 to 513 2 to 446   capped   445/445
(100 %)
3 diff
(99.4 %id)
DA202333 brain .a 69 to 636 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA270455 caudate nucleus .a 69 to 628 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA272684 caudate nucleus .a 69 to 626 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA276103 corpus callosum .a 69 to 634 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA428915 colon .a 69 to 558 2 to 491   capped   490/490
(100 %)
0 diff
(100 %id)
DA429858 colon .a 69 to 635 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA431181 colon .a 69 to 643 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA472430   .a 69 to 623 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA689696   .a 69 to 603 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DA697051   .a 69 to 628 2 to 564   capped   563/563
(100 %)
5 diff
(99.2 %id)
DA734999   .a 69 to 724 2 to 661   capped   658/664
(99 %)
9 diff
(98.7 %id)
DB049612 testis .a 69 to 639 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB110704 thymus .a 69 to 640 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB190415 lung, tumor tissue .a 69 to 658 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
AW247255 lung, small cell carcinoma .a 70 to 660 2 to 592       591/592
(99 %)
7 diff
(98.9 %id)
BG747599 eye, normal pigmented retinal epithelium .a 70 to 757 1 to 688       688/688
(100 %)
2 diff
(99.8 %id)
BG750687 eye, normal pigmented retinal epithelium .a 70 to 850 1 to 781       781/840
(92 %)
28 diff
(96.7 %id)
BI918150 brain .a 71 to 907 1 to 850       850/850
(100 %)
26 diff
(97.0 %id)
BX280862 eye, retinoblastoma .a 75 to 552 1 to 478       478/478
(100 %)
0 diff
(100 %id)
BU535544 adenocarcinoma, cell line, breast .a 76 to 734 1 to 661       661/852
(77 %)
7 diff
(99.2 %id)
BU943979 adenocarcinoma, cell line, breast .a 76 to 929 1 to 859       859/943
(91 %)
13 diff
(98.7 %id)
BU956238 adenocarcinoma, cell line, breast .a 76 to 668 1 to 599       599/870
(68 %)
11 diff
(98.8 %id)
BM903948 eye, retinoblastoma .a 77 to 975 1 to 899       899/965
(93 %)
12 diff
(98.8 %id)
BU158549 embryonal carcinoma, cell line, testis .a 77 to 972 1 to 908       908/913
(99 %)
31 diff
(96.7 %id)
BC000380 Lung, small cell carcinoma .a 78 to 3005 1 to 2927 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 2927/2927
(100 %)
6 diff
(99.8 %id)
BM811272 ovary (pool of 3) .a 79 to 926 20 to 880       861/1060
(81 %)
26 diff
(97.6 %id)
BG470758 eye, retinoblastoma .a 80 to 757 1 to 677       677/677
(100 %)
3 diff
(99.6 %id)
CR615660 Neuroblastoma Cot 50-normalized .a 81 to 1809 1 to 1729 exact     1729/1729
(100 %)
0 diff
(100 %id)
CR624766 T cells (Jurkat cell line) Cot10-normalized .a 81 to 1810 1 to 1730 exact     1730/1730
(100 %)
0 diff
(100 %id)
AL529912 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 81 to 1109 1 to 1026       1026/1039
(98 %)
10 diff
(99.1 %id)
BX403179 Neuroblastoma Cot 50-normalized .a 81 to 1005 1 to 918       920/918
(100 %)
34 diff
(96.3 %id)
AL558170 T cells from T cell leukemia .a 81 to 928 1 to 846   fully sequenced,   846/846
(100 %)
4 diff
(99.6 %id)
BG325787 Kidney, renal cell adenocarcinoma .a 81 to 732 1 to 648       648/672
(96 %)
6 diff
(99.2 %id)
BM907057 brain, hippocampus .a 81 to 885 19 to 825       807/1115
(72 %)
18 diff
(98.4 %id)
BQ891724 carcinoma, cell line, Prostate .a 81 to 995 5 to 919       914/923
(99 %)
20 diff
(97.9 %id)
BU541496 carcinoma, cell line, Prostate .a 81 to 999 15 to 935       921/940
(97 %)
24 diff
(97.5 %id)
BU552449 carcinoma, cell line, Prostate .a 81 to 999 15 to 931       917/936
(97 %)
17 diff
(98.2 %id)
U79775 Kidney .a 81 to 1831 1 to 1752 exact AAA   1752/1752
(100 %)
5 diff
(99.8 %id)
CN358693 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 82 to 732 1 to 652       652/652
(100 %)
2 diff
(99.7 %id)
CR598523 Neuroblastoma Cot 25-normalized .a 82 to 1791 1 to 1710 exact     1710/1710
(100 %)
0 diff
(100 %id)
AL525911 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 82 to 903 1 to 819   fully sequenced,   819/819
(100 %)
2 diff
(99.8 %id)
BG025418 lymph, lymphoma, cell line .a 82 to 838 1 to 769       767/775
(98 %)
32 diff
(95.9 %id)
CA488264   .a 82 to 868 1 to 792       792/873
(90 %)
12 diff
(98.7 %id)
CR603110 Neuroblastoma Cot 25-normalized .a 83 to 1812 1 to 1730 exact     1730/1730
(100 %)
0 diff
(100 %id)
AL526431 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 83 to 961 1 to 875   fully sequenced,   875/875
(100 %)
3 diff
(99.7 %id)
BQ706649 Spleen .a 83 to 881 1 to 805       805/939
(85 %)
11 diff
(98.9 %id)
BU148825 brain, neuroblastoma, cell line .a 88 to 1008 1 to 922       922/923
(99 %)
14 diff
(98.5 %id)
CR999529 T-Lymphocytes .a 88 to 734 1 to 646       646/665
(97 %)
1 diff
(99.9 %id)
BX343133   .a 89 to 1101 1 to 1005       1005/1005
(100 %)
17 diff
(98.4 %id)
BM477993 lymph, lymphoma, cell line .a 89 to 663 1 to 576       576/994
(57 %)
11 diff
(98.9 %id)
CN480980 eye .a 90 to 709 1 to 620       620/620
(100 %)
1 diff
(99.9 %id)
BQ432063 leiomyosarcoma, uterus .a 92 to 867 1 to 779       779/874
(89 %)
11 diff
(98.8 %id)
CN358689 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 95 to 673 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
BE279783 choriocarcinoma, placenta .a 95 to 730 1 to 634       634/688
(92 %)
4 diff
(99.5 %id)
CN358690 embryonic stem cells, DMSO-treated H9 cellline .a 96 to 686 1 to 591       591/591
(100 %)
1 diff
(99.9 %id)
CN358694 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 96 to 637 1 to 541       541/541
(100 %)
4 diff
(99.3 %id)
BF219826 lung, small cell carcinoma .a 97 to 728 1 to 628       628/638
(98 %)
10 diff
(98.5 %id)
CX868529 embryonic stem .a 97 to 625 13 to 541       529/541
(97 %)
7 diff
(98.8 %id)
BM044169 carcinoma, cell line, Prostate .a 98 to 757 1 to 660       660/660
(100 %)
0 diff
(100 %id)
BM045914 carcinoma, cell line, Prostate .a 98 to 725 1 to 630       630/630
(100 %)
8 diff
(98.8 %id)
BE390607 endometrium, adenocarcinoma cell line, uterus .a 100 to 764 1 to 668       670/673
(99 %)
14 diff
(98.0 %id)
BE389465 endometrium, adenocarcinoma cell line, uterus .a 100 to 728 1 to 631       631/635
(99 %)
9 diff
(98.6 %id)
BE385069 melanotic melanoma, skin .a 100 to 718 1 to 620       620/620
(100 %)
4 diff
(99.4 %id)
BE888594 leiomyosarcoma, uterus .a 101 to 826 1 to 721       721/735
(98 %)
8 diff
(99.0 %id)
BQ310466 breast .a 104 to 441 383 to 44       340/387
(87 %)
9 diff
(97.7 %id)
BE549398 cervical carcinoma cell line, cervix .a 105 to 531 1 to 431       431/431
(100 %)
5 diff
(98.9 %id)
CD516986 White Matter .a 105 to 1008 1 to 906       906/957
(94 %)
15 diff
(98.5 %id)
BE796449 lung, small cell carcinoma .a 106 to 737 1 to 632       632/632
(100 %)
0 diff
(100 %id)
CR988277 T-Lymphocytes .a 106 to 838 1 to 733       733/733
(100 %)
1 diff
(99.9 %id)
BM811195 ovary (pool of 3) .a 107 to 1008 1 to 908       908/1009
(89 %)
16 diff
(98.5 %id)
BE892260 melanotic melanoma, skin .a 108 to 793 1 to 684       686/889
(77 %)
11 diff
(98.8 %id)
BE546762 cervical carcinoma cell line, cervix .a 110 to 730 1 to 628       629/840
(74 %)
29 diff
(96.6 %id)
BQ689403 ductal carcinoma, cell line, Pancreas .a 110 to 734 1 to 626   AAA   626/866
(72 %)
4 diff
(99.6 %id)
BE893254 melanotic melanoma, skin .a 111 to 853 1 to 736       736/915
(80 %)
19 diff
(98.0 %id)
CV802398 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 111 to 812 1 to 691       691/811
(85 %)
17 diff
(98.0 %id)
BX384412   .a 114 to 925 14 to 823       810/892
(90 %)
9 diff
(99.0 %id)
BG390720 embryonal carcinoma, cell line, testis .a 114 to 905 1 to 782       782/976
(80 %)
18 diff
(98.2 %id)
BM475008 duodenal adenocarcinoma, cell line, small intestine .a 114 to 922 1 to 821       821/1001
(82 %)
15 diff
(98.6 %id)
TI_1948080219   .a 117 to 824 136 to 846   fully sequenced,   711/846
(84 %)
22 diff
(97.4 %id)
TI_1948080391   .a 117 to 863 137 to 881   fully sequenced,   745/881
(84 %)
20 diff
(97.8 %id)
TI_1948080558   .a 117 to 717 129 to 729   fully sequenced,   601/729
(82 %)
7 diff
(99.1 %id)
TI_1948080733   .a 117 to 818 131 to 835   fully sequenced,   705/835
(84 %)
14 diff
(98.4 %id)
CV025472 mixed .a 118 to 693 1 to 576       576/576
(100 %)
0 diff
(100 %id)
BC014787 Brain, anaplastic oligodendroglioma with1p/19q loss .a 118 to 1831 16 to 1729 exact available from MGC, AAA   1714/1714
(100 %)
4 diff
(99.8 %id)
CX752347 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 122 to 890 1 to 769     Submitted on the opposite strand 769/769
(100 %)
0 diff
(100 %id)
BQ647426 hepatocellular carcinoma, cell line, Liver .a 172 to 1069 9 to 908       900/913
(98 %)
21 diff
(97.7 %id)
L25234   .a 189 to 453 1 to 268       268/268
(100 %)
6 diff
(97.8 %id)
BU846002 ovary, teratocarcinoma, cell line .a 241 to 1099 1 to 864       864/924
(93 %)
9 diff
(99.1 %id)
BU538262 adenocarcinoma, cell line, breast .a 248 to 1193 1 to 958       958/968
(98 %)
12 diff
(98.8 %id)
BG257725 embryonal carcinoma, cell line, testis .a 261 to 968 1 to 705       705/705
(100 %)
8 diff
(98.9 %id)
BP348140 brain .a 267 to 850 1 to 582       582/582
(100 %)
6 diff
(99.0 %id)
BP348156 brain .a 267 to 813 1 to 547       547/582
(93 %)
28 diff
(95.2 %id)
BG751922 eye, normal pigmented retinal epithelium .a 273 to 757 1 to 486       486/486
(100 %)
2 diff
(99.6 %id)
BG491755 amelanotic melanoma, cell line, skin .a 281 to 757 1 to 477       477/477
(100 %)
1 diff
(99.8 %id)
BM555671 amelanotic melanoma, cell line, skin .a 282 to 1088 25 to 837   AAA   813/910
(89 %)
23 diff
(97.5 %id)
CA488334   .a 288 to 1202 1 to 926       924/932
(99 %)
20 diff
(97.9 %id)
BM847668 myeloma .a 306 to 675 1 to 370       370/370
(100 %)
2 diff
(99.5 %id)
BE242266 leukopheresis .a 306 to 662 1 to 356       356/356
(100 %)
4 diff
(98.9 %id)
BF919077 nervous_tumor .a 307 to 641 99 to 435       337/435
(77 %)
11 diff
(97.5 %id)
BQ439941 melanotic melanoma, skin .a 314 to 1106 1 to 798       798/818
(97 %)
9 diff
(98.9 %id)
AL519741 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 331 to 1008 184 to 859       678/859
(78 %)
19 diff
(97.8 %id)
BM474603 eye, retinoblastoma .a 392 to 1006 1 to 615       615/1172
(52 %)
17 diff
(98.6 %id)
CV025259 mixed .a 424 to 566 1 to 143       143/143
(100 %)
1 diff
(99.4 %id)
BQ926973 brain, neuroblastoma, cell line .a 448 to 1339 1 to 900       900/912
(98 %)
24 diff
(97.4 %id)
CR983717 T-Lymphocytes .a 466 to 1283 1 to 821       821/823
(99 %)
6 diff
(99.3 %id)
BG327536 Kidney, renal cell adenocarcinoma .a 491 to 757 1 to 267       267/267
(100 %)
1 diff
(99.7 %id)
BE407175 choriocarcinoma, placenta .a 495 to 737 9 to 253       245/253
(96 %)
6 diff
(97.7 %id)
BI117202 lung, small cell carcinoma .a 536 to 1241 1 to 712       712/721
(98 %)
20 diff
(97.3 %id)
BQ359458 head_normal .a 538 to 740 234 to 24       216/254
(85 %)
10 diff
(96.1 %id)
BG472720 eye, retinoblastoma .a 538 to 757 1 to 220       220/220
(100 %)
1 diff
(99.6 %id)
BE791223 lung, small cell carcinoma .a 612 to 734 1 to 123       123/126
(97 %)
2 diff
(98.5 %id)
BG314947   .a 633 to 864 1 to 232       232/232
(100 %)
1 diff
(99.6 %id)
AA085785 colon, tumor .a 648 to 719 1 to 72       72/73
(98 %)
1 diff
(98.7 %id)
BI223794 cervical carcinoma cell line, cervix .a 651 to 1179 1 to 529       529/529
(100 %)
0 diff
(100 %id)
ES315327 occipital scalp hair, skin .a 682 to 874 1 to 193       193/193
(100 %)
1 diff
(99.5 %id)
ES315319 occipital scalp hair, skin .a 683 to 848 1 to 166       166/166
(100 %)
1 diff
(99.4 %id)
AI905810 breast .a 687 to 1239 573 to 21       555/591
(93 %)
6 diff
(99.0 %id)
TI_1948080559   .a 687 to 1502 938 to 123   fully sequenced,   816/938
(86 %)
3 diff
(99.7 %id)
BQ929700 leiomyosarcoma, uterus .a 723 to 1524 1 to 811       811/875
(92 %)
25 diff
(97.2 %id)
CN358692 embryonic stem cells, cell lines H1, H7, andH9 .a 736 to 1356 1 to 621       621/621
(100 %)
2 diff
(99.7 %id)
AL529911 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 743 to 1704 1070 to 107       946/1032
(91 %)
41 diff
(96.1 %id)
BX443007 B cells (Ramos cell line) .a 744 to 1779 1033 to 1       1033/1033
(100 %)
27 diff
(97.4 %id)
TI_1948154248   .a 747 to 1502 884 to 125       760/1491
(50 %)
31 diff
(98.0 %id)
BG910673 anaplastic oligodendroglioma with 1p/19qloss, brain .a 769 to 1481 1 to 720       720/991
(72 %)
18 diff
(98.2 %id)
BX401873   .a 780 to 1794 1015 to 1       1015/1022
(99 %)
37 diff
(96.4 %id)
TI_1948080734   .a 788 to 1502 827 to 110   fully sequenced,   718/827
(86 %)
10 diff
(98.8 %id)
TI_1948080220   .a 794 to 1502 831 to 120   fully sequenced,   712/831
(85 %)
10 diff
(98.8 %id)
TI_1948080392   .a 833 to 1502 801 to 124   fully sequenced,   678/801
(84 %)
13 diff
(98.4 %id)
BU538915 adenocarcinoma, cell line, breast .a 841 to 1710 1 to 871       871/871
(100 %)
5 diff
(99.5 %id)
CR977660 T-Lymphocytes .a 847 to 1393 1 to 547       547/550
(99 %)
1 diff
(99.9 %id)
BE797653 lung, small cell carcinoma .a 849 to 1532 12 to 691       680/691
(98 %)
16 diff
(97.7 %id)
AL526119 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 873 to 1791 921 to 1   fully sequenced,   921/921
(100 %)
3 diff
(99.7 %id)
BE393496 endometrium, adenocarcinoma cell line, uterus .a 876 to 1500 1 to 621       621/622
(99 %)
5 diff
(99.2 %id)
AI905802 breast .a 885 to 1239 358 to 5       354/358
(98 %)
3 diff
(99.2 %id)
CR977210 T-Lymphocytes .a 885 to 1692 1 to 809       809/813
(99 %)
8 diff
(99.1 %id)
BI850717 adenocarcinoma, cell line, Liver .a 887 to 1505 1 to 618       618/618
(100 %)
4 diff
(99.4 %id)
BG122893 adenocarcinoma, cell line, Liver .a 888 to 1610 1 to 707       707/956
(73 %)
24 diff
(97.5 %id)
AL526390 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 898 to 1812 917 to 1   fully sequenced,   917/917
(100 %)
6 diff
(99.4 %id)
AL580063 T cells from T cell leukemia .a 898 to 1810 912 to 1   fully sequenced,   912/912
(100 %)
11 diff
(98.8 %id)
AL564237 brain, fetal liver, Liver, neuroblastoma cells .a 898 to 1778 893 to 13   fully sequenced,   881/893
(98 %)
3 diff
(99.7 %id)
TI_159723316   .a 906 to 1831 988 to 79   tiling clone, AAA   910/989
(92 %)
15 diff
(98.5 %id)
CN358691 embryonic stem cells, cell lines H1, H7, andH9 .a 926 to 1460 11 to 545       535/545
(98 %)
9 diff
(98.4 %id)
AL525949 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 926 to 1800 875 to 1   fully sequenced,   875/875
(100 %)
10 diff
(98.9 %id)
AL531938 brain, fetal liver, Liver, neuroblastoma cells .a 926 to 1794 870 to 1   fully sequenced,   870/870
(100 %)
15 diff
(98.3 %id)
TI_1948154327   .a 926 to 1502 702 to 126       577/1486
(38 %)
37 diff
(97.6 %id)
AL520798 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 927 to 1757 898 to 67       832/898
(92 %)
5 diff
(99.5 %id)
BX345576 Neuroblastoma Cot 25-normalized .a 929 to 1795 878 to 6       873/878
(99 %)
5 diff
(99.5 %id)
BQ278599 adenocarcinoma, cell line, breast .a 935 to 1800 1 to 879       879/1089
(80 %)
33 diff
(97.0 %id)
BI088864 cervix .a 963 to 1630 1 to 672       672/672
(100 %)
9 diff
(98.7 %id)
BG492204 amelanotic melanoma, cell line, skin .a 983 to 1760 797 to 18       780/798
(97 %)
0 diff
(100 %id)
AL561816 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 1006 to 1877 873 to 1   tiling clone,   873/873
(100 %)
33 diff
(96.3 %id)
BX331168   .a 1008 to 1823 819 to 1       819/904
(90 %)
54 diff
(94.1 %id)
BX331041   .a 1009 to 1829 829 to 1       829/912
(90 %)
19 diff
(98.0 %id)
TI_149314592   .a 1010 to 1827 897 to 83   AAA   815/951
(85 %)
7 diff
(99.3 %id)
TI_151746136   .a 1010 to 1831 933 to 118   AAA   816/927
(88 %)
23 diff
(97.6 %id)
BM048441 carcinoma, cell line, Prostate .a 1034 to 1828 1 to 801       801/855
(93 %)
25 diff
(97.1 %id)
AI905804 breast .a 1067 to 1211 145 to 1       145/145
(100 %)
5 diff
(96.6 %id)
BU171426 melanotic melanoma, skin .a 1079 to 1828 12 to 763   AAA   752/763
(98 %)
11 diff
(98.6 %id)
TI_159683487   .a 1080 to 1824 873 to 130   AAA   744/1001
(74 %)
12 diff
(98.9 %id)
CB321712 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1091 to 1827 755 to 19   AAA   737/737
(100 %)
2 diff
(99.8 %id)
CB853658 Human Lung Epithelial cells, lung .a 1099 to 1831 751 to 19   AAA   733/733
(100 %)
0 diff
(100 %id)
BX392335 Neuroblastoma Cot 25-normalized .a 1115 to 1822 708 to 1       708/892
(79 %)
12 diff
(98.7 %id)
BX455761 B cells (Ramos cell line) .a 1127 to 1824 696 to 1       696/890
(78 %)
9 diff
(99.0 %id)
BM974024 lung .a 1127 to 1831 723 to 19   AAA   705/710
(99 %)
1 diff
(99.9 %id)
CB529300 Aveolar Macrophage, lung .a 1180 to 1831 669 to 19   AAA   651/676
(96 %)
4 diff
(99.5 %id)
BU628434 cell lines, Chondrosarcoma .a 1181 to 1827 665 to 19   AAA   647/648
(99 %)
0 diff
(100 %id)
BQ016964 lung, Metastatic Chondrosarcoma .a 1183 to 1827 663 to 19   AAA   645/645
(100 %)
0 diff
(100 %id)
CB243970 Human Lung Epithelial cells, lung .a 1184 to 1826 661 to 19   AAA   643/643
(100 %)
4 diff
(99.4 %id)
CD370286 Alveolar Macrophage, lung .a 1187 to 1827 659 to 19   AAA   641/641
(100 %)
1 diff
(99.9 %id)
TI_149307422   .a 1190 to 1831 726 to 85   AAA   642/941
(68 %)
8 diff
(99.2 %id)
BM979212 lung, Primary Lung Epithelial Cells .a 1193 to 1831 653 to 15   AAA   639/640
(99 %)
7 diff
(99.0 %id)
CB160133 Liver .a 1195 to 1623 16 to 444       429/444
(96 %)
6 diff
(98.7 %id)
CN480979 eye .a 1221 to 1831 630 to 20   AAA   611/611
(100 %)
1 diff
(99.9 %id)
AA135818 colon, tumor .a 1262 to 1385 1 to 124       124/124
(100 %)
5 diff
(96.0 %id)
AI762088 colon, colon tumor, RER+ .a 1280 to 1498 218 to 1       218/241
(90 %)
10 diff
(95.9 %id)
BM930550 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1298 to 1831 1 to 534   AAA   534/534
(100 %)
0 diff
(100 %id)
DB367160   .a 1307 to 1827 519 to 1       519/519
(100 %)
12 diff
(97.7 %id)
AI634547 carcinoid, lung .a 1312 to 1831 533 to 14   AAA   520/520
(100 %)
2 diff
(99.7 %id)
AI860822 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 1315 to 1827 537 to 24   AAA   514/514
(100 %)
17 diff
(96.7 %id)
BM707534 eye, eye anterior segment .a 1326 to 1766 1 to 441       441/441
(100 %)
3 diff
(99.4 %id)
AW193286 adenocarcinoma, Pancreas .a 1349 to 1826 480 to 3       478/484
(98 %)
0 diff
(100 %id)
AA931669 carcinoid, lung .a 1359 to 1500 1 to 142     Submitted on the opposite strand 142/142
(100 %)
5 diff
(96.5 %id)
TI_151742048   .a 1367 to 1824 562 to 105   AAA   458/460
(99 %)
7 diff
(98.5 %id)
AI167158 pooled .a 1372 to 1827 456 to 1       456/456
(100 %)
0 diff
(100 %id)
AA621964 colon, colon tumor RER+ .a 1373 to 1831 461 to 2       460/461
(99 %)
0 diff
(100 %id)
AI362799 anaplastic oligodendroglioma, brain .a 1384 to 1826 460 to 18   AAA   443/443
(100 %)
5 diff
(98.9 %id)
AA814978 germinal center B cell .a 1399 to 1769 368 to 1       368/372
(98 %)
5 diff
(98.7 %id)
AA879460 pooled .a 1401 to 1826 443 to 18   AAA   426/426
(100 %)
1 diff
(99.8 %id)
BG403301 bladder, transitional cell papilloma, cell line .a 1410 to 1825 1 to 416   AAA   416/416
(100 %)
0 diff
(100 %id)
AA085786 colon, tumor .a 1411 to 1826 425 to 8       418/426
(98 %)
0 diff
(100 %id)
AA135482 colon, tumor .a 1445 to 1820 384 to 1       384/390
(98 %)
11 diff
(97.2 %id)
F36453 pectoral muscle (after mastectomy) .a 1461 to 1541 1 to 81       81/81
(100 %)
0 diff
(100 %id)
AA477106 ovarian tumor, ovary .a 1465 to 1827 363 to 1       363/363
(100 %)
5 diff
(98.7 %id)
CK904565 Islets of Langerhans, Pancreas .a 1471 to 1831 1 to 361   AAA   361/361
(100 %)
0 diff
(100 %id)
BM054869 Islets of Langerhans, Pancreas .a 1487 to 1829 1 to 343   AAA   343/343
(100 %)
0 diff
(100 %id)
BF769734 epid_tumor .a 1488 to 1740 253 to 1     Submitted on the opposite strand 253/263
(96 %)
1 diff
(99.7 %id)
AI160620 placenta .a 1510 to 1831 346 to 25   AAA   322/322
(100 %)
4 diff
(98.8 %id)
L25241   .a 1513 to 1756 1 to 250       250/253
(98 %)
9 diff
(96.5 %id)
AI368572 anaplastic oligodendroglioma, brain .a 1533 to 1828 301 to 6       296/301
(98 %)
0 diff
(100 %id)
BM475744 embryonal carcinoma, cell line, testis .a 1543 to 1855 1 to 312   AAA   312/312
(100 %)
1 diff
(99.7 %id)
DB300812.
matches multiple genes
cerebellum .a 1553 to 1831 279 to 1     also hits gene yonaya 279/279
(100 %)
0 diff
(100 %id)
CR984335 T-Lymphocytes .a 1565 to 1839 1 to 274   AAA   274/274
(100 %)
1 diff
(99.7 %id)
CN315324 embryonic stem cells, cell lines H1, H7, andH9 .a 1612 to 1834 226 to 4     Submitted on the opposite strand 223/226
(98 %)
0 diff
(100 %id)
G36526   .a 1616 to 1831 216 to 1     Submitted on the opposite strand 216/216
(100 %)
2 diff
(99.1 %id)
AW901007 nervous_normal .a 1639 to 1890 7 to 257   tiling clone,   251/257
(97 %)
1 diff
(99.7 %id)
BU959900 mixed (pool of 40 RNAs) .a 1658 to 1828 1 to 171   AAA   171/171
(100 %)
4 diff
(97.7 %id)
AV691919 hepatocellular carcinoma .a 2937 to 3485 1 to 548   tiling clone, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 548/548
(100 %)
1 diff
(99.9 %id)
AK303000 testis .b 1 to 1349 1 to 1349 exact tiling clone,   1349/1349
(100 %)
1 diff
(100.0 %id)
DB192127 ovary, tumor tissue .b 703 to 1268 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
AA421801 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1141 to 1436 1 to 296       296/419
(70 %)
3 diff
(99.3 %id)
BI045690 prostate_normal .b 1149 to 1494 356 to 11   tiling clone,   346/358
(96 %)
0 diff
(100 %id)
DA103841 cerebellum .c 1 to 552 2 to 553   tiling clone, capped   552/552
(100 %)
0 diff
(100 %id)
DB181713 liver, tumor tissue .c 6 to 570 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA093641 cerebellum .c 7 to 550 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA282927 corpus callosum .c 26 to 588 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
AL709488 human skeletal muscle .c 30 to 413 1 to 384       384/384
(100 %)
6 diff
(98.5 %id)
DA398757 thalamus .c 32 to 579 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA452119 tongue, tumor tissue .c 32 to 587 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA513379 brain .c 32 to 574 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA878065 Prostate .c 32 to 609 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA942592 Spleen .c 32 to 439 2 to 409   capped   408/408
(100 %)
0 diff
(100 %id)
BP248593 Kidney .c 33 to 615 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
DB278593 uterus .c 34 to 547 2 to 515   capped   514/514
(100 %)
1 diff
(99.9 %id)
BM561572 duodenal adenocarcinoma, cell line, small intestine .c 61 to 1043 1 to 998   tiling clone,   998/1003
(99 %)
26 diff
(97.5 %id)
AL137757 testis .c 559 to 3560 1 to 3001 K224R tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 3001/3001
(100 %)
8 diff
(99.8 %id)
BQ319669 colon .c 717 to 1031 336 to 27       310/336
(92 %)
0 diff
(100 %id)
BE720246 head_neck .d 1 to 423 11 to 432   tiling clone,   422/432
(97 %)
6 diff
(98.7 %id)
AY033999 neuroblastoma .d 314 to 1662 1 to 1349   tiling clone, AAA   1349/1349
(100 %)
4 diff
(99.8 %id)
AL516808 brain, neuroblastoma, neuroblastoma cells .e 1 to 887 1 to 882   tiling clone,   882/882
(100 %)
22 diff
(97.6 %id)
DB294196   .e 30 to 796 2 to 771   capped   770/794
(96 %)
11 diff
(98.7 %id)
DB294204   .e 30 to 843 2 to 816   tiling clone, capped   815/815
(100 %)
11 diff
(98.7 %id)
AL515182 neuroblastoma, placenta .e 45 to 892 1 to 847   tiling clone,   847/847
(100 %)
1 diff
(99.9 %id)
AL516807 brain, neuroblastoma, neuroblastoma cells .e 972 to 1738 790 to 1   tiling clone,   790/1007
(78 %)
61 diff
(94.0 %id)
TI_149291402   .e 974 to 1775 899 to 103   tiling clone, AAA   797/880
(90 %)
5 diff
(99.5 %id)
AL515181 neuroblastoma, placenta .e 1226 to 1772 549 to 1       549/549
(100 %)
15 diff
(97.3 %id)
AU159986   .e 1226 to 1770 543 to 1       543/561
(96 %)
19 diff
(96.7 %id)
DB384241   .e 1305 to 1771 463 to 1       463/512
(90 %)
25 diff
(95.2 %id)
CR601038 Neuroblastoma Cot 25-normalized .f 1 to 1670 1 to 1670 exact tiling clone,   1670/1670
(100 %)
0 diff
(100 %id)
AA112350 Pancreas .f 30 to 403 1 to 375       375/376
(99 %)
7 diff
(98.2 %id)
AA113148 Pancreas .f 1296 to 1714 425 to 5   tiling clone,   421/426
(98 %)
0 diff
(100 %id)
BI753993 brain .g 1 to 801 5 to 801   tiling clone,   801/803
(99 %)
8 diff
(99.1 %id)
TI_57218868   .g 1 to 801 38 to 834       801/836
(95 %)
13 diff
(98.5 %id)
AW170433 cervix, tumor .h 1 to 472 1 to 472 exact tiling clone, Submitted on the opposite strand 472/472
(100 %)
0 diff
(100 %id)
DA307419 hippocampus .i 1 to 586 2 to 587 L94P tiling clone, capped   586/587
(99 %)
2 diff
(99.7 %id)
DA808017 brain .i 27 to 586 2 to 561 exact capped   560/560
(100 %)
0 diff
(100 %id)
DA584026 lung .i 30 to 620 2 to 592 exact capped   591/591
(100 %)
0 diff
(100 %id)
BM468399 leiomyosarcoma, uterus .i 143 to 1064 1 to 927   tiling clone,   927/1099
(84 %)
16 diff
(98.6 %id)
BP326174 prostata .j 1 to 578 1 to 581   tiling clone,   581/581
(100 %)
3 diff
(99.5 %id)
DB283019 uterus .j 557 to 1102 2 to 547   tiling clone, capped   546/546
(100 %)
1 diff
(99.9 %id)
BF343581 brain, glioblastoma with EGFR amplification .k-u 1 to 660 1 to 657 R26H P29L L30W A31P T32H ... tiling clone,   657/873
(75 %)
9 diff
(99.0 %id)
AW901608 nervous_normal .k-u 267 to 813 559 to 15       545/567
(96 %)
7 diff
(98.8 %id)
AW901609 nervous_normal .k-u 267 to 816 549 to 3       547/557
(98 %)
0 diff
(100 %id)
AW901610 nervous_normal .k-u 267 to 816 555 to 9       547/563
(97 %)
0 diff
(100 %id)
AW901611 nervous_normal .k-u 267 to 813 554 to 12       543/562
(96 %)
0 diff
(100 %id)
AW901605 nervous_normal .k-u 273 to 796 520 to 1   tiling clone,   520/520
(100 %)
0 diff
(100 %id)
AW901603 nervous_normal .k-u 290 to 799 1 to 506       506/507
(99 %)
7 diff
(98.7 %id)
AA477351 ovarian tumor, ovary .k-u 291 to 662 1 to 371       371/371
(100 %)
8 diff
(97.9 %id)
CR745199 ovarian tumor, ovary .k-u 296 to 717 1 to 422       422/422
(100 %)
1 diff
(99.8 %id)
BF363883 nervous_normal .k-u 299 to 568 2 to 267       266/267
(99 %)
7 diff
(97.4 %id)
BF363886 nervous_normal .k-u 311 to 568 1 to 257       257/257
(100 %)
9 diff
(96.5 %id)
CA388865 eye, RPE/choroid .k-u 321 to 662 1 to 342       342/342
(100 %)
0 diff
(100 %id)
BF363881 nervous_normal .k-u 341 to 816 1 to 477   tiling clone,   477/487
(97 %)
11 diff
(97.8 %id)
AW901606 nervous_normal .k-u 472 to 726 1 to 253       253/253
(100 %)
7 diff
(97.3 %id)
AK026354 human small intestine .k-u 479 to 1360 1 to 882   tiling clone, available from FLJ, AAA   882/882
(100 %)
1 diff
(99.9 %id)
BP263582 small intestine .k-u 479 to 1060 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
AW901602 nervous_normal .k-u 480 to 635 14 to 165       152/165
(92 %)
6 diff
(96.4 %id)
BF378221 uterus .k-u 700 to 825 13 to 137       125/137
(91 %)
6 diff
(95.7 %id)
AI276863 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .l 1 to 480 1 to 480   tiling clone, Submitted on the opposite strand 480/480
(100 %)
0 diff
(100 %id)
CV572525 cornea, eye .l 69 to 695 1 to 627 R16X G30S tiling clone,   627/627
(100 %)
1 diff
(99.9 %id)
AW861177 colon .m-u 1 to 476 478 to 1 R16G tiling clone,   478/478
(100 %)
4 diff
(99.2 %id)
BM982548 lung, Primary Lung Cystic Fibrosis EpithelialCells Gene RRP1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AL526287 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized Gene RRP1, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
AL562648 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized Gene RRP1, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
T07989   Gene RRP1, variant not shown         Suspected internal deletion, this clone was ignored    
T07990   Gene RRP1, variant not shown         Suspected internal deletion, this clone was ignored    
BP320761 placenta Gene RRP1, variant not shown         Suspected internal deletion, this clone was ignored    
BP328101 prostata Gene RRP1, variant not shown         Suspected internal deletion, this clone was ignored    
DA105325 cerebellum Gene RRP1, variant not shown       capped Suspected internal deletion, this clone was ignored    
AA425939   Gene RRP1, variant not shown         Suspected internal deletion, this clone was ignored    
TI_149297491   Gene RRP1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u, .l, .m-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C