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Gene CYP4F12TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
127 supporting clones for gene CYP4F12 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC340482 thalamus .a 1 to 563 1 to 563   tiling clone,   563/563
(100 %)
2 diff
(99.7 %id)
NM_023944.2   .a 320 to 2044 1 to 1725 T16M N76D I90V C188R S522G RefSeq,   1725/1725
(100 %)
5 diff
(99.8 %id)
DB221158 trachea .a 320 to 876 2 to 558   capped   557/557
(100 %)
4 diff
(99.3 %id)
DC344722 colon .a 323 to 578 1 to 256       256/258
(99 %)
5 diff
(98.1 %id)
BP262443 small intestine .a 331 to 915 1 to 585       585/585
(100 %)
4 diff
(99.4 %id)
BC035350 Colon, Kidney, Stomach, adult, whole pooled .a 335 to 2019 1 to 1685 T16M N76D I90V tiling clone, available from MGC, AAA   1685/1685
(100 %)
8 diff
(99.6 %id)
BI759580 pooled colon, kidney, stomach .a 335 to 1028 1 to 693       693/699
(99 %)
6 diff
(99.2 %id)
TI_57149600   .a 335 to 1028 69 to 761       693/767
(90 %)
12 diff
(98.5 %id)
BM737787 Ascites, stomach .a 335 to 723 1 to 390       390/392
(99 %)
8 diff
(98.0 %id)
DB181210 liver, tumor tissue .a 335 to 900 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
BM737774 Ascites, stomach .a 337 to 623 1 to 287       287/287
(100 %)
5 diff
(98.3 %id)
BM738084 Ascites, stomach .a 338 to 772 1 to 434       434/434
(100 %)
4 diff
(99.1 %id)
AY358977   .a 340 to 2013 1 to 1674 T16M N76D I90V C188R S522G     1674/1676
(99 %)
6 diff
(99.7 %id)
BU838590 dorsal root ganglia .a 341 to 1250 1 to 918       918/919
(99 %)
18 diff
(98.1 %id)
CD631802   .a 342 to 903 37 to 596       560/599
(93 %)
16 diff
(97.4 %id)
CD631803   .a 342 to 903 559 to 1       559/572
(97 %)
11 diff
(98.1 %id)
CD631804   .a 342 to 903 38 to 596       559/599
(93 %)
16 diff
(97.4 %id)
CD631805   .a 342 to 903 562 to 1       562/575
(97 %)
10 diff
(98.3 %id)
CD631807   .a 342 to 903 38 to 596       559/599
(93 %)
16 diff
(97.4 %id)
CD631808   .a 342 to 903 561 to 2       560/574
(97 %)
7 diff
(98.8 %id)
CD631809   .a 342 to 901 557 to 4       554/570
(97 %)
8 diff
(98.6 %id)
CD631810   .a 342 to 852 35 to 548       514/548
(93 %)
18 diff
(96.8 %id)
CD631811   .a 342 to 903 38 to 596       559/599
(93 %)
13 diff
(97.9 %id)
CD631812   .a 342 to 903 559 to 1   tiling clone,   559/572
(97 %)
7 diff
(98.8 %id)
CD631817   .a 342 to 903 39 to 598       560/601
(93 %)
15 diff
(97.6 %id)
CD631813   .a 345 to 903 16 to 572       557/575
(96 %)
13 diff
(97.8 %id)
CD631814   .a 345 to 903 559 to 3       557/601
(92 %)
4 diff
(99.4 %id)
CD631815   .a 345 to 903 39 to 595       557/598
(93 %)
13 diff
(97.9 %id)
CD631816   .a 345 to 903 559 to 3       557/574
(97 %)
4 diff
(99.4 %id)
CD631806   .a 347 to 903 38 to 593       556/596
(93 %)
16 diff
(97.4 %id)
AB035130   .a 351 to 2044 1 to 1694 T16M N76D I90V C188R S522G tiling clone,   1694/1694
(100 %)
6 diff
(99.7 %id)
AB035131   .a 351 to 2044 1 to 1694 P13L T16M N76D I90V C188R ...     1694/1694
(100 %)
7 diff
(99.6 %id)
AY008841 Liver .a 381 to 1955 1 to 1575 T16M N76D I90V C188R S522G     1575/1575
(100 %)
5 diff
(99.7 %id)
CV029649 mixed .a 381 to 982 1 to 602       602/602
(100 %)
3 diff
(99.6 %id)
TI_1948136767   .a 381 to 911 132 to 666       535/1318
(40 %)
28 diff
(97.9 %id)
TI_1948136768   .a 381 to 1182 136 to 939       804/1297
(61 %)
17 diff
(98.7 %id)
TI_1948137116   .a 381 to 1083 130 to 843     Submitted on the opposite strand 713/1468
(48 %)
24 diff
(98.4 %id)
TI_1948137800   .a 381 to 1027 132 to 780       649/1342
(48 %)
17 diff
(98.8 %id)
TI_1948137801   .a 381 to 1131 138 to 891       754/1280
(58 %)
24 diff
(98.2 %id)
EL594708 epidermis, skin .a 399 to 640 257 to 16     Submitted on the opposite strand 242/277
(87 %)
2 diff
(99.3 %id)
BM837270 Ascites, stomach .a 414 to 878 1 to 465       465/465
(100 %)
9 diff
(98.1 %id)
CD631818   .a 481 to 903 425 to 4       422/425
(99 %)
4 diff
(99.1 %id)
CD631823   .a 757 to 1398 8 to 649       642/673
(95 %)
8 diff
(98.9 %id)
CD631824   .a 757 to 1403 658 to 14       645/665
(96 %)
3 diff
(99.6 %id)
CB129498 Liver .a 851 to 1310 1 to 460       460/460
(100 %)
0 diff
(100 %id)
AW362519 colon .a 854 to 1184 333 to 2       332/351
(94 %)
4 diff
(98.9 %id)
CD631820   .a 929 to 1648 1 to 719       719/719
(100 %)
4 diff
(99.5 %id)
CD631821   .a 929 to 1624 1 to 696       696/702
(99 %)
6 diff
(99.2 %id)
CD631822   .a 955 to 1715 759 to 2       758/763
(99 %)
6 diff
(99.3 %id)
AI761193 colon, colon tumor, RER+ .a 1038 to 1299 274 to 13       262/274
(95 %)
0 diff
(100 %id)
CB128624 Liver .a 1043 to 1535 1 to 493       493/493
(100 %)
0 diff
(100 %id)
TI_1948137803   .a 1051 to 1961 1037 to 122   tiling clone,   916/1375
(66 %)
26 diff
(98.2 %id)
DR003796 Liver .a 1079 to 1751 1 to 675       675/675
(100 %)
8 diff
(98.9 %id)
AW062507 colon .a 1102 to 1524 33 to 458       426/458
(93 %)
11 diff
(97.6 %id)
CV378046 denis_drash .a 1104 to 1519 1 to 415       415/420
(98 %)
4 diff
(99.1 %id)
TI_1948136770   .a 1121 to 1961 959 to 121       839/1368
(61 %)
18 diff
(98.7 %id)
TI_1948137451   .a 1155 to 1776 144 to 772       629/1492
(42 %)
33 diff
(97.8 %id)
TI_1948137452   .a 1155 to 1785 149 to 781       633/1351
(46 %)
18 diff
(98.7 %id)
AW857484 colon .a 1193 to 1478 295 to 8       288/295
(97 %)
6 diff
(98.0 %id)
TI_1948137115   .a 1209 to 1961 884 to 126     Submitted on the opposite strand 759/1270
(59 %)
26 diff
(98.0 %id)
CD631819   .a 1273 to 1694 438 to 17       426/438
(97 %)
0 diff
(100 %id)
TI_1948136769   .a 1298 to 1961 772 to 103       670/1085
(61 %)
11 diff
(99.0 %id)
AA316671 colon .a 1346 to 1778 18 to 448       431/452
(95 %)
9 diff
(98.1 %id)
AW957963   .a 1346 to 1887 12 to 554       543/554
(98 %)
27 diff
(95.2 %id)
TI_1948137453   .a 1356 to 1961 730 to 124       607/1421
(42 %)
6 diff
(99.6 %id)
TI_1948137114   .a 1385 to 1961 703 to 125     Submitted on the opposite strand 529/843
(62 %)
43 diff
(94.9 %id)
AA699986 liver and spleen .a 1465 to 2017 551 to 1       551/551
(100 %)
7 diff
(98.8 %id)
TI_1948137802   .a 1495 to 1961 644 to 169       476/1294
(36 %)
21 diff
(98.4 %id)
AA707224 liver and spleen .a 1509 to 2017 507 to 1       509/507
(100 %)
18 diff
(96.5 %id)
AI276610 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1628 to 1938 311 to 1       311/322
(96 %)
19 diff
(94.1 %id)
AA494546 colon .a 1653 to 2012 357 to 1       357/357
(100 %)
2 diff
(99.5 %id)
R11209 liver and spleen .a 1703 to 2003 308 to 1       308/316
(97 %)
14 diff
(95.6 %id)
W88598 liver and spleen .a 1731 to 2012 1 to 282   fully sequenced, AAA   282/282
(100 %)
18 diff
(93.7 %id)
R08175 liver and spleen .a 1737 to 2017 304 to 20   AAA   285/288
(98 %)
13 diff
(95.5 %id)
BM981611 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1738 to 2012 293 to 19   AAA   275/282
(97 %)
5 diff
(98.3 %id)
BP423867 small intestine .a 1796 to 2018 1 to 223     Submitted on the opposite strand 223/225
(99 %)
2 diff
(99.2 %id)
W89099 liver and spleen .a 1831 to 2016 186 to 1   fully sequenced,   186/186
(100 %)
7 diff
(96.3 %id)
AK091995 Liver .b 1 to 1603 810 to 2412 E21G C108R tiling clone, available from FLJ,   1603/2412
(66 %)
9 diff
(99.7 %id)
AX747299   .b 1 to 1603 810 to 2412 E21G C108R     1603/2412
(66 %)
9 diff
(99.7 %id)
DB143778 thymus .c 1 to 555 2 to 556   tiling clone, capped   555/555
(100 %)
5 diff
(99.1 %id)
DA924298 small intestine .c 7 to 581 2 to 578   capped   577/577
(100 %)
7 diff
(98.8 %id)
BX505775   .c 8 to 608 1 to 601   tiling clone,   601/601
(100 %)
6 diff
(99.1 %id)
AK075435 placenta .c 14 to 1919 1 to 1906 C39R tiling clone,   1906/1906
(100 %)
7 diff
(99.7 %id)
DA219668 brain .c 15 to 573 2 to 560   capped   559/559
(100 %)
4 diff
(99.3 %id)
DA829655 placenta .c 15 to 734 2 to 730   capped   729/735
(99 %)
20 diff
(97.3 %id)
T98080 liver and spleen .c 1309 to 1643 1 to 346   fully sequenced,   346/346
(100 %)
15 diff
(95.7 %id)
CU457148 epidermis .c 1370 to 1577 219 to 14     Submitted on the opposite strand 206/228
(90 %)
0 diff
(100 %id)
DB321264.
matches multiple genes
Liver .c 1433 to 1919 488 to 1     also hits gene kehiyu 488/488
(100 %)
3 diff
(99.4 %id)
BM767149 stomach .c 1434 to 1913 1 to 480       480/480
(100 %)
1 diff
(99.8 %id)
BX109837 liver and spleen .c 1473 to 1915 1 to 443       443/445
(99 %)
9 diff
(98.0 %id)
R11267 liver and spleen .c 1474 to 1789 1 to 326       326/327
(99 %)
20 diff
(93.9 %id)
R29134   .c 1496 to 1691 1 to 195       195/195
(100 %)
6 diff
(97.0 %id)
DR422336 eye, Pterygium .c 1507 to 1914 1 to 408   tiling clone, AAA   408/408
(100 %)
0 diff
(100 %id)
DB374552 placenta .c 1509 to 1919 411 to 1       411/413
(99 %)
4 diff
(99.1 %id)
T98002 liver and spleen .c 1612 to 1917 317 to 8   fully sequenced,   310/317
(97 %)
4 diff
(98.8 %id)
DA377763 thalamus .d 1 to 634 2 to 635   tiling clone, capped   634/634
(100 %)
0 diff
(100 %id)
BI458189 brain, hypothalamus .d 166 to 956 1 to 798   tiling clone, available from MGC,   798/799
(99 %)
26 diff
(96.8 %id)
BC034916 Brain, hypothalamus .d 171 to 2433 6 to 2268 exact tiling clone, available from MGC, AAA   2263/2263
(100 %)
7 diff
(99.7 %id)
AA305180 colon .d 367 to 788 1 to 422       422/422
(100 %)
1 diff
(99.8 %id)
CD514734 White Matter .d 876 to 1713 1 to 846       846/865
(97 %)
14 diff
(98.4 %id)
AL832171 cervix .e 1 to 2860 1 to 2862 E20G C107R tiling clone, available from DKFZ, AAA   2862/2862
(100 %)
7 diff
(99.8 %id)
DA928816 small intestine .e 1122 to 1635 2 to 515   capped   514/514
(100 %)
1 diff
(99.9 %id)
CB142482 Liver .e 1656 to 2148 1 to 489       489/489
(100 %)
2 diff
(99.6 %id)
CB147828 Liver .e 1656 to 2140 1 to 481       481/488
(98 %)
9 diff
(98.2 %id)
AK304138 trachea .f 1 to 1001 1 to 1001 T16M N76D I90V tiling clone,   1001/1012
(98 %)
10 diff
(99.1 %id)
DC420452 uterus .f 1 to 461 1 to 465   tiling clone,   465/465
(100 %)
9 diff
(98.1 %id)
DB279973 uterus .g 1 to 549 2 to 549   tiling clone, capped   548/548
(100 %)
9 diff
(98.4 %id)
AW892786 nervous_normal .g 349 to 731 1 to 383   tiling clone,   383/383
(100 %)
13 diff
(96.7 %id)
BX476680   .h 1 to 618 7 to 622 T16M N76D I90V T157I tiling clone,   616/622
(99 %)
10 diff
(98.4 %id)
AK304389 trachea .h 11 to 1313 1 to 1303 A113T tiling clone,   1303/1303
(100 %)
2 diff
(99.9 %id)
DC418592 trachea .h 11 to 568 1 to 558       558/558
(100 %)
2 diff
(99.7 %id)
BM772906 Ascites, stomach .h 17 to 696 1 to 679 T16M N76D I90V V141D G150X ...     679/679
(100 %)
6 diff
(99.2 %id)
BM772910 Ascites, stomach .h 17 to 710 1 to 694 T16M N76D I90V V141D T157I     694/694
(100 %)
5 diff
(99.3 %id)
BM738347 Ascites, stomach .h 26 to 487 1 to 462       462/462
(100 %)
3 diff
(99.4 %id)
BM737770 Ascites, stomach .h 26 to 681 1 to 656 T16M N76D I90V V141D E151G ...     656/656
(100 %)
7 diff
(99.0 %id)
AK074412 ileal mucosa .i 1 to 3252 1 to 3257 exact tiling clone, available from FLJ, AAA   3253/3257
(99 %)
11 diff
(99.7 %id)
DB237377 trachea .j 1 to 590 3 to 593 F51L tiling clone, capped   592/592
(100 %)
7 diff
(98.9 %id)
DB240488 trachea .j 1 to 594 3 to 596 exact tiling clone, to resequence, capped   595/595
(100 %)
3 diff
(99.5 %id)
DB350574 trachea .j 1240 to 1798 559 to 1   tiling clone, to resequence,   559/559
(100 %)
1 diff
(99.9 %id)
BX481676   .k 1 to 687 1 to 687 T16M N76D G87X tiling clone,   687/687
(100 %)
3 diff
(99.6 %id)
DA855943 placenta .k 5 to 576 2 to 573 T16M N76D capped   572/572
(100 %)
2 diff
(99.7 %id)
DB286504 uterus .k 5 to 554 2 to 551 T16M W29X N76D capped   550/550
(100 %)
2 diff
(99.7 %id)
DB248354 uterus .l 1 to 631 2 to 632 T16M L31H tiling clone, capped   631/631
(100 %)
3 diff
(99.6 %id)
DB275155 uterus .m 1 to 572 2 to 573 T16M tiling clone, capped   572/572
(100 %)
1 diff
(99.9 %id)
CD694538 normal nasopharynx Gene CYP4F12, variant not shown         This clone was ignored    
CB115664 Liver Gene CYP4F12, variant not shown         This clone was ignored    
BM827061 Ascites, stomach Gene CYP4F12, variant not shown         This clone was ignored    
DB013188 esophageal, tumor tissue Gene CYP4F12, variant not shown       capped This clone was ignored    
DB016100 esophageal, tumor tissue Gene CYP4F12, variant not shown       capped This clone was ignored    
DB243473 stomach, tumor tissue Gene CYP4F12, variant not shown       capped This clone was ignored    
DB291185 uterus Gene CYP4F12, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC