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Gene CYP4F11TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
80 supporting clones for gene CYP4F11 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_021187.3   .a 1 to 3395 1 to 3395 exact RefSeq,   3395/3395
(100 %)
1 diff
(100.0 %id)
DC394428 esophageal, tumor tissue .a 5 to 531 1 to 527   tiling clone,   527/528
(99 %)
3 diff
(99.5 %id)
DC345817 tongue, tumor tissue .a 32 to 601 1 to 569       569/569
(100 %)
2 diff
(99.7 %id)
DC346299 tongue, tumor tissue .a 36 to 607 1 to 572       572/572
(100 %)
3 diff
(99.5 %id)
DC394493 esophageal, tumor tissue .a 36 to 592 1 to 557       557/557
(100 %)
4 diff
(99.3 %id)
DC300478 breast .a 38 to 601 1 to 564       564/564
(100 %)
2 diff
(99.7 %id)
DC347085 tongue, tumor tissue .a 38 to 605 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
DC347351 tongue, tumor tissue .a 38 to 619 1 to 582   tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
DC394523 esophageal, tumor tissue .a 38 to 618 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
BG332763 large cell carcinoma, lung .a 42 to 768 1 to 723       723/852
(84 %)
21 diff
(97.6 %id)
BG488791 large cell carcinoma, lung .a 42 to 789 1 to 759   tiling clone,   759/759
(100 %)
20 diff
(97.4 %id)
DC305196 cerebellum .a 47 to 598 1 to 552       552/552
(100 %)
3 diff
(99.5 %id)
DC345975 tongue, tumor tissue .a 53 to 617 1 to 565       565/565
(100 %)
3 diff
(99.5 %id)
DC327642 caudate nucleus .a 58 to 563 1 to 506       506/506
(100 %)
3 diff
(99.5 %id)
DC346843 tongue, tumor tissue .a 58 to 589 1 to 532       532/532
(100 %)
2 diff
(99.7 %id)
DC302031   .a 68 to 614 1 to 547       547/547
(100 %)
2 diff
(99.7 %id)
DC301763   .a 165 to 727 1 to 563       563/563
(100 %)
2 diff
(99.7 %id)
DA137705 alzheimer cortex .a 333 to 894 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
AF236085 brain; liver .a 351 to 2088 1 to 1738 C276R D446N T496I tiling clone, AAA   1738/1738
(100 %)
11 diff
(99.4 %id)
AK289424 breast .a 433 to 2088 1 to 1656 C276R D446N F458L tiling clone,   1656/1656
(100 %)
6 diff
(99.7 %id)
DA036118 breast .a 434 to 1021 2 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
DC425984 tongue, tumor tissue .a 2390 to 2806 417 to 1   tiling clone,   417/417
(100 %)
0 diff
(100 %id)
BC016853 Colon, adenocarcinoma .b 1 to 1666 1 to 1666 C276R D446N tiling clone, available from MGC, AAA   1666/1666
(100 %)
6 diff
(99.7 %id)
DA451735 tongue, tumor tissue .b 1 to 568 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
NM_001128932.1   .b 1 to 2973 1 to 2973 exact RefSeq,   2973/2973
(100 %)
1 diff
(100.0 %id)
DA129862 alzheimer cortex .b 5 to 539 2 to 536   capped   535/535
(100 %)
5 diff
(99.1 %id)
DA141629 alzheimer cortex .b 6 to 557 2 to 553   capped   552/552
(100 %)
3 diff
(99.5 %id)
DA450788 tongue, tumor tissue .b 6 to 568 2 to 566   capped   565/565
(100 %)
3 diff
(99.5 %id)
DA453390 tongue, tumor tissue .b 6 to 559 2 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
DB018719 esophageal, tumor tissue .b 7 to 569 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA448259 tongue, tumor tissue .b 18 to 575 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
CD630769   .b 27 to 379 360 to 8       353/375
(94 %)
3 diff
(99.2 %id)
CD630768   .b 30 to 379 9 to 366       366/374
(97 %)
11 diff
(97.1 %id)
BJ995203 hepatoblastoma .b 35 to 589 16 to 570   tiling clone,   556/570
(97 %)
6 diff
(99.0 %id)
BE617226 adenocarcinoma, colon .b 35 to 762 15 to 739       726/976
(74 %)
35 diff
(96.5 %id)
CV022905 mixed .b 37 to 625 1 to 589       589/589
(100 %)
2 diff
(99.7 %id)
TI_1948146577   .b 37 to 881 128 to 973       845/1287
(65 %)
38 diff
(97.1 %id)
TI_1948146891   .b 37 to 566 127 to 658       531/1422
(37 %)
16 diff
(98.9 %id)
TI_1948146892   .b 37 to 801 127 to 900       773/1358
(56 %)
28 diff
(98.0 %id)
CD630766   .b 58 to 379 17 to 339       323/347
(93 %)
10 diff
(97.2 %id)
CD630767   .b 58 to 379 330 to 8       323/333
(96 %)
4 diff
(98.8 %id)
BJ994188 hepatoblastoma .b 77 to 542 1 to 468       468/474
(98 %)
7 diff
(98.6 %id)
T56204 Liver .b 98 to 365 1 to 267       267/268
(99 %)
4 diff
(98.6 %id)
T69645 Liver .b 127 to 488 1 to 361       362/363
(99 %)
11 diff
(97.0 %id)
BU180723 large cell carcinoma, lung .b 168 to 863 1 to 697       697/920
(75 %)
9 diff
(99.1 %id)
BF035735 adenocarcinoma, ovary .b 174 to 850 1 to 676       676/676
(100 %)
4 diff
(99.5 %id)
BF541099 hypernephroma, Kidney .b 322 to 952 1 to 638       638/850
(75 %)
23 diff
(97.3 %id)
BG230432 moderate to poorly differentiated invasivecarcinoma, tongue .b 648 to 1005 9 to 366       358/373
(95 %)
8 diff
(97.9 %id)
TI_1948146893   .b 675 to 1610 1075 to 128       948/1298
(73 %)
42 diff
(96.8 %id)
TI_1948146579   .b 804 to 1610 947 to 132       816/1493
(54 %)
29 diff
(98.1 %id)
TI_1948146894   .b 810 to 1610 931 to 134       800/1379
(58 %)
28 diff
(98.0 %id)
TI_1948146578   .b 818 to 1610 924 to 128       797/1275
(62 %)
17 diff
(98.7 %id)
BE617730 adenocarcinoma, colon .b 856 to 1618 794 to 1       764/961
(79 %)
40 diff
(95.9 %id)
BX112132 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 977 to 1472 1 to 497       497/497
(100 %)
2 diff
(99.6 %id)
AI831572 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 977 to 1665 689 to 1       689/690
(99 %)
15 diff
(97.9 %id)
BF820584 kidney_tumor .b 1094 to 1478 16 to 401       386/401
(96 %)
7 diff
(98.3 %id)
BF820741 kidney_tumor .b 1094 to 1478 16 to 401       386/401
(96 %)
7 diff
(98.3 %id)
BF836276 head_neck .b 1099 to 1501 413 to 15     Submitted on the opposite strand 399/413
(96 %)
3 diff
(99.3 %id)
BJ994189 hepatoblastoma .b 1128 to 1642 515 to 1       515/517
(99 %)
3 diff
(99.5 %id)
BM907847 large cell carcinoma, lung .b 1136 to 1929 1 to 804   tiling clone,   804/1046
(76 %)
32 diff
(97.0 %id)
T56269 Liver .b 1248 to 1631 391 to 1       337/391
(86 %)
21 diff
(94.7 %id)
AA991369 breast .b 1287 to 1673 387 to 1       387/387
(100 %)
3 diff
(99.3 %id)
T69576 Liver .b 1353 to 1666 316 to 1       316/324
(97 %)
12 diff
(96.3 %id)
AI640461 Kidney .b 1354 to 1672 349 to 31   AAA   319/319
(100 %)
10 diff
(96.9 %id)
BM923448 pooled colon, kidney, stomach .b 1389 to 1666 1 to 277   AAA   277/277
(100 %)
1 diff
(99.7 %id)
BG925221 cartilage .b 1399 to 1666 118 to 385   AAA   268/317
(84 %)
7 diff
(97.8 %id)
TI_149313676   .b 1572 to 2372 889 to 91   tiling clone, AAA   799/947
(84 %)
21 diff
(97.8 %id)
CB305536 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 1756 to 2372 635 to 19   AAA   617/617
(100 %)
0 diff
(100 %id)
AA335970 epididymis .b 1892 to 2059 1 to 168       168/168
(100 %)
0 diff
(100 %id)
BJ995204 hepatoblastoma .b 1956 to 2356 401 to 1       401/401
(100 %)
0 diff
(100 %id)
AW293594   .b 2058 to 2334 1 to 277     Submitted on the opposite strand 277/287
(96 %)
1 diff
(99.7 %id)
TI_149301639   .b 2144 to 2975 909 to 86   tiling clone, AAA   824/942
(87 %)
17 diff
(98.2 %id)
BU934470 mixed (pool of 40 RNAs) .b 2208 to 2770 1 to 559   tiling clone,   559/783
(71 %)
11 diff
(98.6 %id)
CB850568 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 2271 to 2975 724 to 19   tiling clone, AAA   706/706
(100 %)
2 diff
(99.8 %id)
AL833940 amygdala .c 1 to 2871 7 to 2874 C276R R424Q tiling clone, available from DKFZ, AAA   2875/2874
(100 %)
20 diff
(99.4 %id)
AW511413 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 2568 to 3039 472 to 1   tiling clone,   472/473
(99 %)
3 diff
(99.4 %id)
BG424018 Kidney, renal cell adenocarcinoma .c 2740 to 3393 1 to 645   tiling clone,   645/645
(100 %)
17 diff
(97.4 %id)
AK125714 esophageal, tumor tissue .d 1 to 2530 2 to 2531   tiling clone, available from FLJ,   2531/2531
(100 %)
3 diff
(99.9 %id)
DB018698 esophageal, tumor tissue .d 1 to 565 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
BG952218 colon .d 43 to 475 434 to 2   tiling clone,   433/434
(99 %)
0 diff
(100 %id)
DB335531 esophageal, tumor tissue .d 1994 to 2530 537 to 1       537/537
(100 %)
0 diff
(100 %id)
AV748110 Pituitary .e-u 1 to 597 1 to 591 W9X tiling clone,   591/595
(99 %)
7 diff
(98.9 %id)
AV748390 Pituitary .e-u 1 to 358 1 to 352       352/354
(99 %)
7 diff
(98.1 %id)
AK309292 tongue, tumor tissue Gene CYP4F11, variant not shown         Suspected internal deletion, this clone was ignored    
DC346520 tongue, tumor tissue Gene CYP4F11, variant not shown         Suspected internal deletion, this clone was ignored    
DA449036 tongue, tumor tissue Gene CYP4F11, variant not shown       capped Suspected internal deletion, this clone was ignored    
BM727421 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene CYP4F11, variant not shown         This clone was ignored    
BU740887 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene CYP4F11, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C