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Gene CYP27B1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
108 supporting clones for gene CYP27B1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CK904570 Islets of Langerhans, Pancreas .a 1 to 586 1 to 586   tiling clone,   586/586
(100 %)
0 diff
(100 %id)
BM054883 Islets of Langerhans, Pancreas .a 17 to 515 1 to 500       500/500
(100 %)
1 diff
(99.8 %id)
CK904569 Islets of Langerhans, Pancreas .a 389 to 945 568 to 12   tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 557/568
(98 %)
0 diff
(100 %id)
BP274447 Kidney .a 717 to 1299 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BP296031   .a 777 to 1359 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
NM_000785.3   .a 777 to 3262 1 to 2486 exact RefSeq, AAA   2486/2486
(100 %)
0 diff
(100 %id)
AB005038 Kidney .a 808 to 3258 1 to 2451 exact     2451/2451
(100 %)
0 diff
(100 %id)
BP276326 Kidney .a 892 to 1466 1 to 575       575/575
(100 %)
0 diff
(100 %id)
AK314953 Kidney .a 893 to 2455 1 to 1563 D320N     1563/1563
(100 %)
1 diff
(100.0 %id)
DA626679 Kidney .a 893 to 1436 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA629123 Kidney .a 893 to 1473 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
BP301661   .a 893 to 1463 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
BG395458 eye, retinoblastoma .a 894 to 1521 1 to 634       634/634
(100 %)
13 diff
(98.0 %id)
DA622183 Kidney .a 894 to 1437 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
BM836364 myeloma .a 895 to 1167 1 to 273       273/273
(100 %)
0 diff
(100 %id)
BC136386 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 899 to 3183 1 to 2285 exact     2285/2285
(100 %)
0 diff
(100 %id)
DN998329 breast cancer, Mammary gland (cancer tissue) .a 910 to 1693 1 to 782       782/782
(100 %)
7 diff
(99.2 %id)
BE252070 eye, retinoblastoma .a 914 to 1447 1 to 538   available from MGC,   538/538
(100 %)
4 diff
(99.3 %id)
AF020192   .a 917 to 3261 1 to 2345 exact AAA   2345/2345
(100 %)
4 diff
(99.9 %id)
AI493132 Kidney .a 917 to 1361 445 to 1       445/454
(98 %)
1 diff
(99.8 %id)
TI_1948233141   .a 928 to 1518 135 to 728       594/1441
(41 %)
36 diff
(97.6 %id)
AB005989 Kidney .a 929 to 3261 1 to 2333 exact tiling clone,   2333/2333
(100 %)
0 diff
(100 %id)
AF246895   .a 929 to 2643 1 to 1715 exact     1715/1715
(100 %)
0 diff
(100 %id)
EL736702 mixed .a 929 to 1387 1 to 460       460/460
(100 %)
5 diff
(99.0 %id)
AW304138 Kidney .a 929 to 1346 418 to 1       418/418
(100 %)
6 diff
(98.6 %id)
BG438236 large cell carcinoma, lung .a 934 to 1645 1 to 720       720/906
(79 %)
31 diff
(96.6 %id)
AI521214 Kidney .a 938 to 1358 421 to 1       421/421
(100 %)
0 diff
(100 %id)
AW771889 Kidney .a 938 to 1319 384 to 3       382/384
(99 %)
5 diff
(98.7 %id)
BE327004 Kidney .a 938 to 1319 385 to 3       383/385
(99 %)
0 diff
(100 %id)
BF195899 Kidney .a 950 to 1321 372 to 1       372/372
(100 %)
0 diff
(100 %id)
BI517830 pooled colon, kidney, stomach .a 985 to 1375 92 to 485       466/485
(96 %)
29 diff
(94.1 %id)
BE259047 eye, retinoblastoma .a 1022 to 1601 1 to 577       577/595
(96 %)
9 diff
(98.5 %id)
AI471782 Kidney .a 1076 to 1383 308 to 1       308/308
(100 %)
1 diff
(99.7 %id)
BG828395 muscle, rhabdomyosarcoma .a 1222 to 1860 221 to 866       646/890
(72 %)
20 diff
(97.8 %id)
AA878984 Kidney .a 1376 to 1873 1 to 491     Submitted on the opposite strand 491/491
(100 %)
13 diff
(97.4 %id)
AW237596 Kidney .a 1402 to 1876 1 to 474     Submitted on the opposite strand 474/474
(100 %)
4 diff
(99.2 %id)
BF431586 Kidney .a 1423 to 1927 1 to 505     Submitted on the opposite strand 505/505
(100 %)
5 diff
(99.1 %id)
AA877142 Kidney .a 1501 to 1760 1 to 257     Submitted on the opposite strand 257/257
(100 %)
4 diff
(98.5 %id)
BI838093 pooled pancreas and spleen .a 1535 to 2237 1 to 709       709/709
(100 %)
24 diff
(96.7 %id)
TI_57165483   .a 1535 to 2237 35 to 743       709/743
(95 %)
23 diff
(97.0 %id)
BU163668 ductal carcinoma, cell line, Pancreas .a 1565 to 2341 1 to 786       786/923
(85 %)
8 diff
(99.2 %id)
AA135226 colon, tumor .a 1576 to 1976 1 to 406       406/406
(100 %)
14 diff
(96.6 %id)
BF529340 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2049 to 2731 1 to 678       678/1448
(46 %)
15 diff
(99.0 %id)
CB529804 Aveolar Macrophage, lung .a 2051 to 2749 718 to 17   AAA   702/702
(100 %)
6 diff
(99.2 %id)
BX402024   .a 2151 to 3215 1076 to 17       1060/1076
(98 %)
9 diff
(99.2 %id)
BF094759 uterus_tumor .a 2435 to 2740 1 to 305       305/317
(96 %)
2 diff
(99.4 %id)
BM905724 leiomyosarcoma, uterus .a 2451 to 3261 11 to 821       811/839
(96 %)
1 diff
(99.9 %id)
BP226039   .a 2502 to 3075 1 to 574       574/574
(100 %)
0 diff
(100 %id)
BM727818 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2572 to 3111 1 to 541       541/541
(100 %)
2 diff
(99.7 %id)
U46845 eye, glioblastoma .a 2653 to 2829 185 to 9       177/185
(95 %)
0 diff
(100 %id)
CA425041 cell lines, Chondrosarcoma .a 2680 to 3262 600 to 19   AAA   582/582
(100 %)
1 diff
(99.9 %id)
AI765918 Kidney .a 2683 to 3262 580 to 1       580/580
(100 %)
0 diff
(100 %id)
AI671767 Kidney .a 2705 to 3259 558 to 4       555/558
(99 %)
0 diff
(100 %id)
BG058531 blood, lymphocyte .a 2751 to 3261 511 to 1       511/511
(100 %)
0 diff
(100 %id)
AI818156 anaplastic oligodendroglioma, brain .a 2764 to 3263 500 to 1   tiling clone,   500/500
(100 %)
0 diff
(100 %id)
BM713851 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2769 to 3259 1 to 491   AAA   491/491
(100 %)
0 diff
(100 %id)
BM714023 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2769 to 3262 1 to 494   AAA   494/494
(100 %)
0 diff
(100 %id)
BM679899 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2769 to 3258 501 to 12   AAA   490/499
(98 %)
2 diff
(99.6 %id)
BM723216 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2769 to 3258 1 to 490   AAA   490/490
(100 %)
0 diff
(100 %id)
AI522157 Kidney .a 2771 to 3262 492 to 1       492/492
(100 %)
0 diff
(100 %id)
BF508659   .a 2773 to 3262 508 to 18   AAA   491/491
(100 %)
5 diff
(99.0 %id)
AW051280 pooled .a 2774 to 3258 485 to 1       485/485
(100 %)
0 diff
(100 %id)
AW296270   .a 2816 to 3255 457 to 18   AAA   440/459
(95 %)
1 diff
(99.8 %id)
AA962620 Kidney .a 2830 to 3262 433 to 1       433/433
(100 %)
0 diff
(100 %id)
AW300394 Kidney .a 2848 to 3260 416 to 3       414/416
(99 %)
0 diff
(100 %id)
AI935699 Kidney .a 2849 to 3256 412 to 5       408/412
(99 %)
0 diff
(100 %id)
AA135088 colon, tumor .a 2858 to 3262 423 to 19   AAA   405/405
(100 %)
1 diff
(99.8 %id)
AW235676 Kidney .a 2861 to 3261 403 to 3       401/403
(99 %)
0 diff
(100 %id)
BE221721 Kidney .a 2865 to 3263 400 to 2       399/400
(99 %)
0 diff
(100 %id)
AI471301 follicular lymphoma, lymph node .a 2911 to 3261 347 to 1       347/347
(100 %)
5 diff
(98.6 %id)
AW449645   .a 2924 to 3262 357 to 18   AAA   340/350
(97 %)
2 diff
(99.5 %id)
AW195105 Kidney .a 2930 to 3256 1 to 327     Submitted on the opposite strand 327/327
(100 %)
0 diff
(100 %id)
BI038064 nervous_tumor .a 2939 to 3230 290 to 1       290/290
(100 %)
1 diff
(99.7 %id)
AW448909   .a 2950 to 3262 331 to 18   AAA   314/314
(100 %)
2 diff
(99.4 %id)
AI473128 Kidney .a 2972 to 3258 291 to 5       287/291
(98 %)
0 diff
(100 %id)
AW771862 Kidney .a 2973 to 3261 291 to 1       291/291
(100 %)
2 diff
(99.4 %id)
AW815862 stomach .a 2978 to 3163 189 to 5       185/192
(96 %)
10 diff
(94.8 %id)
AW820235 stomach .a 2978 to 3163 185 to 1       185/188
(98 %)
10 diff
(94.7 %id)
BE063288 breast .a 2978 to 3163 184 to 1     Submitted on the opposite strand 184/187
(98 %)
11 diff
(94.2 %id)
AW237412 Kidney .a 2982 to 3256 278 to 4       275/278
(98 %)
0 diff
(100 %id)
AI222585 Kidney .a 2995 to 3261 267 to 1       267/267
(100 %)
0 diff
(100 %id)
BC001776 Eye, retinoblastoma .b 1 to 2473 1 to 2473 exact tiling clone, available from MGC, AAA   2473/2473
(100 %)
0 diff
(100 %id)
BC020267 Eye, retinoblastoma .b 1 to 2473 1 to 2473   available from MGC, AAA   2473/2473
(100 %)
0 diff
(100 %id)
BG395700 eye, retinoblastoma .b 20 to 677 1 to 661   available from MGC,   661/661
(100 %)
8 diff
(98.8 %id)
TI_1948233292   .b 54 to 688 136 to 775   fully sequenced,   640/775
(82 %)
24 diff
(97.0 %id)
TI_1948233601   .b 54 to 471 134 to 551   fully sequenced,   418/445
(93 %)
5 diff
(98.9 %id)
TI_1948233293   .b 330 to 707 506 to 129   fully sequenced,   378/506
(74 %)
0 diff
(100 %id)
TI_1948233602   .b 410 to 707 424 to 126   fully sequenced,   299/424
(70 %)
0 diff
(100 %id)
DA042207 bladder .b 621 to 1118 2 to 499   capped   498/498
(100 %)
1 diff
(99.8 %id)
DQ925367   .c 1 to 973 1 to 971   tiling clone,   971/971
(100 %)
3 diff
(99.7 %id)
AA128853 Pancreas .c 770 to 1130 1 to 367   tiling clone,   367/367
(100 %)
17 diff
(95.4 %id)
AA133139 Pancreas .c 1904 to 2336 435 to 1   tiling clone,   435/435
(100 %)
8 diff
(98.2 %id)
DQ925368   .d 1 to 976 1 to 972 K297S A298G V299G V300Q K301G ... tiling clone,   972/972
(100 %)
4 diff
(99.6 %id)
BF203970 muscle, rhabdomyosarcoma .e 1 to 760 1 to 749 I11L R12E E13K K14R S15A ... tiling clone,   752/862
(87 %)
26 diff
(97.0 %id)
DA628202 Kidney .f 1 to 544 2 to 545 exact tiling clone, capped   544/544
(100 %)
0 diff
(100 %id)
DA624921 Kidney .g 1 to 547 2 to 548   tiling clone, capped   547/547
(100 %)
0 diff
(100 %id)
BX111995 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .g 112 to 565 454 to 1     Submitted on the opposite strand 454/454
(100 %)
0 diff
(100 %id)
AI433907 Kidney .g 142 to 548 407 to 1       407/414
(98 %)
0 diff
(100 %id)
AI698396 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .g 288 to 573 287 to 2   tiling clone,   286/287
(99 %)
3 diff
(99.0 %id)
AI524790 Kidney .h 1 to 244 244 to 1 G38V C71S R73S tiling clone,   244/244
(100 %)
4 diff
(98.4 %id)
BE926675 breast .i-u 1 to 400 11 to 410 V2G P3S R5L P6S tiling clone,   400/410
(97 %)
6 diff
(98.6 %id)
AV661396 corresponding non cancerous liver tissue Gene CYP27B1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV661436 corresponding non cancerous liver tissue Gene CYP27B1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
DQ925362   Gene CYP27B1, variant not shown         Suspected internal deletion, this clone was ignored    
DQ925363   Gene CYP27B1, variant not shown         Suspected internal deletion, this clone was ignored    
DQ925364   Gene CYP27B1, variant not shown         Suspected internal deletion, this clone was ignored    
DQ925365   Gene CYP27B1, variant not shown         Suspected internal deletion, this clone was ignored    
DQ925366   Gene CYP27B1, variant not shown         Suspected internal deletion, this clone was ignored    
DQ925369   Gene CYP27B1, variant not shown         Suspected internal deletion, this clone was ignored    
DQ925370   Gene CYP27B1, variant not shown         Suspected internal deletion, this clone was ignored    
DQ925371   Gene CYP27B1, variant not shown         Suspected internal deletion, this clone was ignored    
AA290861 ovarian tumor, ovary Gene CYP27B1, variant not shown         This clone was ignored    
AA291043 ovarian tumor, ovary Gene CYP27B1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI