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Gene CYB5BTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
309 supporting clones for gene CYB5B back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AL560064 B cells (Ramos cell line), B cells from Burkitt lymphoma .a 1 to 785 1 to 786 D14X G15W K16E G17R Q18A ... tiling clone,   786/786
(100 %)
2 diff
(99.8 %id)
AB009282 testis .a 64 to 791 21 to 749 K115Q     729/749
(97 %)
11 diff
(98.6 %id)
DA921237 small intestine .a 68 to 623 2 to 557 exact capped   556/556
(100 %)
0 diff
(100 %id)
DB210179 trachea .a 68 to 524 2 to 464   capped   463/470
(98 %)
11 diff
(97.7 %id)
BP360850 thalamus .a 69 to 651 1 to 583 exact     583/583
(100 %)
0 diff
(100 %id)
AF130113 Liver .a 71 to 933 863 to 1 exact   Submitted on the opposite strand 863/1874
(46 %)
5 diff
(99.8 %id)
CR610358 Placenta Cot 25-normalized .a 71 to 1880 1 to 1810 exact     1810/1810
(100 %)
0 diff
(100 %id)
NM_030579.2   .a 71 to 4356 1 to 4286 exact RefSeq,   4286/4286
(100 %)
0 diff
(100 %id)
DR155701 human embryonic stem cells differentiated toan early endodermal cell type .a 77 to 842 1 to 766 exact     766/766
(100 %)
0 diff
(100 %id)
DA632808 Kidney .a 78 to 656 2 to 580 exact capped   579/579
(100 %)
0 diff
(100 %id)
FN165050 breast carcinoma .a 80 to 158 1 to 76       76/76
(100 %)
5 diff
(93.5 %id)
BX425156 neuroblastoma .a 94 to 1205 1 to 1095 D14T Y94X     1095/1102
(99 %)
34 diff
(97.0 %id)
BX446002 neuroblastoma .a 94 to 462 1 to 369       369/369
(100 %)
2 diff
(99.5 %id)
CR605284 neuroblastoma .a 94 to 1888 1 to 1795 exact     1795/1795
(100 %)
0 diff
(100 %id)
CD671548 eye, Iris .a 94 to 521 1 to 427   fully sequenced,   427/427
(100 %)
0 diff
(100 %id)
CA395624 eye, RPE/choroid .a 95 to 705 1 to 611 exact     611/611
(100 %)
0 diff
(100 %id)
DB284322 uterus .a 95 to 641 2 to 548 exact capped   547/547
(100 %)
0 diff
(100 %id)
DA007863   .a 96 to 643 2 to 549 exact capped   548/548
(100 %)
0 diff
(100 %id)
DA011633 adrenal gland .a 96 to 673 2 to 579 exact capped   578/578
(100 %)
0 diff
(100 %id)
DA186930 amygdala .a 96 to 657 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DT217224 brain .a 96 to 655 1 to 560 exact     560/560
(100 %)
0 diff
(100 %id)
BQ051349 large cell carcinoma, lung .a 96 to 1046 1 to 963 exact     963/1013
(95 %)
25 diff
(97.6 %id)
DA609010   .a 96 to 607 2 to 513   capped   512/512
(100 %)
0 diff
(100 %id)
BP326659 prostata .a 96 to 650 1 to 555 K148X     555/555
(100 %)
0 diff
(100 %id)
BM788337 stomach .a 96 to 719 1 to 624 exact     624/624
(100 %)
0 diff
(100 %id)
DB026734 testis .a 96 to 654 2 to 560 exact capped   559/559
(100 %)
0 diff
(100 %id)
BP366676 thymus .a 96 to 672 1 to 577 exact     577/577
(100 %)
0 diff
(100 %id)
DA011308 adrenal gland .a 97 to 647 2 to 552 exact capped   551/551
(100 %)
0 diff
(100 %id)
DA025628   .a 97 to 660 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DA060857 cerebellum .a 97 to 641 2 to 546 exact capped   545/545
(100 %)
0 diff
(100 %id)
DA121188 cerebellum .a 97 to 620 2 to 525 exact capped   524/524
(100 %)
0 diff
(100 %id)
DA187881 amygdala .a 97 to 635 2 to 540 exact capped   539/539
(100 %)
0 diff
(100 %id)
DA344592 substantia nigra .a 97 to 671 2 to 576 exact capped   575/575
(100 %)
0 diff
(100 %id)
DA474333   .a 97 to 651 2 to 556 exact capped   555/555
(100 %)
0 diff
(100 %id)
DA583648 lung .a 97 to 699 2 to 604 exact capped   603/603
(100 %)
0 diff
(100 %id)
DA597937   .a 97 to 652 2 to 557 exact capped   556/556
(100 %)
0 diff
(100 %id)
TI_45215665   .a 97 to 954 90 to 945 R54S     856/958
(89 %)
19 diff
(98.1 %id)
DB003257 breast, tumor tissue .a 97 to 633 2 to 538 exact capped   537/537
(100 %)
0 diff
(100 %id)
DB010548 colon, tumor tissue .a 97 to 612 2 to 517 exact capped   516/516
(100 %)
0 diff
(100 %id)
DB079513 testis .a 97 to 567 2 to 472   capped   471/471
(100 %)
0 diff
(100 %id)
DB237016 trachea .a 97 to 652 2 to 557 exact capped   556/556
(100 %)
0 diff
(100 %id)
DA039037 bladder .a 98 to 657 2 to 561 exact capped   560/560
(100 %)
0 diff
(100 %id)
DA192583 amygdala .a 98 to 680 2 to 584 exact capped   583/583
(100 %)
0 diff
(100 %id)
DA370357 thalamus .a 98 to 565 2 to 469   capped   468/468
(100 %)
0 diff
(100 %id)
DA548073   .a 98 to 658 2 to 562 exact capped   561/561
(100 %)
0 diff
(100 %id)
BU507105 leiomyosarcoma, uterus .a 98 to 930 1 to 840 G82X G137X     840/923
(91 %)
8 diff
(99.2 %id)
CX782909 human embryonic stem cells .a 98 to 780 20 to 701 exact fully sequenced, Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 682/701
(97 %)
6 diff
(99.2 %id)
DB242068 stomach, tumor tissue .a 98 to 656 2 to 560 exact capped   559/559
(100 %)
0 diff
(100 %id)
TI_57197092   .a 102 to 934 29 to 884 K111N D112G S114F N116Q D117M ...     854/885
(96 %)
41 diff
(95.4 %id)
BG388011 embryonal carcinoma, cell line, testis .a 104 to 929 1 to 819 exact     819/871
(94 %)
18 diff
(98.0 %id)
BG697790 skin .a 105 to 963 1 to 858 exact     858/860
(99 %)
8 diff
(99.1 %id)
BG177616 lymph, lymphoma, cell line .a 106 to 929 1 to 827 exact     827/907
(91 %)
30 diff
(96.7 %id)
DA009753 adrenal gland .a 107 to 607 2 to 502   capped   501/501
(100 %)
0 diff
(100 %id)
CR621814 B cells (Ramos cell line) .a 107 to 1895 1 to 1789 exact     1789/1789
(100 %)
0 diff
(100 %id)
CR622662 Placenta Cot 25-normalized .a 107 to 1893 1 to 1787 exact     1787/1787
(100 %)
0 diff
(100 %id)
CR625442 Placenta Cot 25-normalized .a 107 to 1846 1 to 1740 exact     1740/1740
(100 %)
0 diff
(100 %id)
BX395689 Placenta Cot 25-normalized .a 107 to 1020 1 to 913 exact     913/958
(95 %)
0 diff
(100 %id)
TI_45236181   .a 107 to 966 62 to 928 exact     867/928
(93 %)
21 diff
(97.8 %id)
TI_57235114   .a 107 to 945 28 to 869 exact     842/869
(96 %)
11 diff
(98.8 %id)
TI_57240293   .a 107 to 989 39 to 928 E64R V65G L66S L67A E68G ...     890/950
(93 %)
38 diff
(96.0 %id)
CB114631 Liver .a 107 to 611 1 to 505       505/505
(100 %)
0 diff
(100 %id)
BG122611 adenocarcinoma, cell line, Liver .a 108 to 928 1 to 828 exact     828/987
(83 %)
32 diff
(96.8 %id)
BQ425153 melanotic melanoma, skin .a 108 to 969 1 to 866 exact     866/866
(100 %)
6 diff
(99.4 %id)
BQ878879 dorsal root ganglia .a 108 to 978 1 to 872 exact     872/872
(100 %)
5 diff
(99.5 %id)
CR623816 fetal brain .a 109 to 1893 1 to 1785 exact     1785/1785
(100 %)
0 diff
(100 %id)
BF981499 duodenal adenocarcinoma, cell line, small intestine .a 112 to 892 1 to 770 exact     770/951
(80 %)
19 diff
(98.1 %id)
BC014431 Lymph, Burkitt lymphoma .a 113 to 1897 1 to 1785 exact available from MGC, AAA   1785/1785
(100 %)
0 diff
(100 %id)
BI908230 leukocyte .a 113 to 945 1 to 836 exact     836/836
(100 %)
5 diff
(99.5 %id)
BM801527 duodenal adenocarcinoma, cell line, small intestine .a 114 to 892 1 to 783 exact     783/904
(86 %)
17 diff
(98.2 %id)
BQ723479 sympathetic trunk .a 114 to 1023 1 to 913 exact     913/915
(99 %)
21 diff
(97.8 %id)
BQ052705 blood, natural killer cells, cell line .a 115 to 1065 1 to 960 exact     960/1034
(92 %)
19 diff
(98.2 %id)
BQ231782 large cell carcinoma, lung .a 115 to 930 1 to 827 exact     827/868
(95 %)
15 diff
(98.3 %id)
CB132283 Liver .a 116 to 730 1 to 615 exact     615/615
(100 %)
0 diff
(100 %id)
DA194857 amygdala .a 117 to 656 2 to 541 exact capped   540/540
(100 %)
0 diff
(100 %id)
BM463392 embryonal carcinoma, cell line, testis .a 119 to 1068 1 to 955 exact     955/1034
(92 %)
32 diff
(97.0 %id)
BU521467 leiomyosarcoma, uterus .a 121 to 905 1 to 794 exact     794/835
(95 %)
18 diff
(97.9 %id)
DB227138 trachea .a 122 to 699 2 to 579 exact capped   578/578
(100 %)
0 diff
(100 %id)
DA014803 adrenal gland .a 123 to 683 2 to 562 exact capped   561/561
(100 %)
0 diff
(100 %id)
BE797530 lung, small cell carcinoma .a 124 to 949 1 to 833 exact     833/885
(94 %)
26 diff
(97.1 %id)
BE908178 epithelioid carcinoma, Pancreas .a 125 to 876 1 to 748 exact     748/926
(80 %)
12 diff
(98.8 %id)
BM764093 myeloma .a 125 to 653 1 to 529 exact     529/529
(100 %)
0 diff
(100 %id)
DA013418 adrenal gland .a 126 to 679 2 to 555 exact capped   554/554
(100 %)
0 diff
(100 %id)
DA074773 cerebellum .a 126 to 716 2 to 592 exact capped   591/591
(100 %)
0 diff
(100 %id)
CR599824 placenta .a 126 to 1888 1 to 1763 exact     1763/1763
(100 %)
0 diff
(100 %id)
DB031349 testis .a 126 to 723 2 to 599 exact capped   598/598
(100 %)
0 diff
(100 %id)
BM471337 melanotic melanoma, skin .a 127 to 991 1 to 879 exact     879/1055
(83 %)
21 diff
(98.1 %id)
CN423744 embryonic stem cells, cell lines H1, H7, andH9 .a 128 to 509 17 to 399       383/399
(95 %)
8 diff
(98.0 %id)
BP196744 adrenal gland .a 129 to 699 1 to 571 exact     571/571
(100 %)
0 diff
(100 %id)
BP248296 Kidney .a 129 to 711 1 to 583 exact     583/583
(100 %)
0 diff
(100 %id)
TI_154170736   .a 129 to 848 77 to 802 exact     726/875
(82 %)
20 diff
(97.8 %id)
DA421517 cervix .a 130 to 714 2 to 586 exact capped   585/585
(100 %)
0 diff
(100 %id)
BQ653142 hepatocellular carcinoma, cell line, Liver .a 130 to 951 1 to 830 exact     830/968
(85 %)
23 diff
(97.7 %id)
BQ645199 hepatocellular carcinoma, cell line, Liver .a 130 to 908 1 to 791 exact     791/1031
(76 %)
15 diff
(98.6 %id)
BQ644546 hepatocellular carcinoma, cell line, Liver .a 130 to 1016 1 to 886 exact     886/887
(99 %)
11 diff
(98.8 %id)
CR616857 Placenta Cot 25-normalized .a 131 to 1731 1 to 1601 exact     1601/1601
(100 %)
0 diff
(100 %id)
BE268220 Burkitt lymphoma, lymph .a 132 to 626 1 to 495 exact     495/495
(100 %)
0 diff
(100 %id)
BE396964 Burkitt lymphoma, lymph .a 132 to 854 1 to 717 exact     717/718
(99 %)
11 diff
(98.5 %id)
BF983927 duodenal adenocarcinoma, cell line, small intestine .a 134 to 882 1 to 744 exact     744/744
(100 %)
10 diff
(98.7 %id)
BC004373 Pancreas, adenocarcinoma .a 136 to 1898 1 to 1764 exact available from MGC, AAA   1764/1764
(100 %)
5 diff
(99.8 %id)
BM469127 embryonal carcinoma, cell line, testis .a 136 to 921 1 to 793 exact AAA   793/954
(83 %)
19 diff
(98.1 %id)
DB187847 liver, tumor tissue .a 137 to 723 2 to 588 exact capped   587/587
(100 %)
0 diff
(100 %id)
AK291576 placenta .a 139 to 1174 1 to 1036 exact     1036/1036
(100 %)
0 diff
(100 %id)
BX415487 thymus .a 139 to 940 1 to 802 D14B     802/802
(100 %)
0 diff
(100 %id)
BP224869   .a 139 to 720 1 to 582 exact     582/582
(100 %)
0 diff
(100 %id)
DB457327 testis .a 139 to 603 1 to 465       465/465
(100 %)
0 diff
(100 %id)
DB460605 testis .a 139 to 591 1 to 453       453/453
(100 %)
0 diff
(100 %id)
DA837207 placenta .a 139 to 661 2 to 524 exact capped   523/523
(100 %)
0 diff
(100 %id)
DA014432 adrenal gland .a 140 to 699 2 to 561 exact capped   560/560
(100 %)
0 diff
(100 %id)
DA016099 adrenal gland .a 140 to 661 2 to 523 exact capped   522/522
(100 %)
0 diff
(100 %id)
DA063524 cerebellum .a 140 to 699 2 to 561 exact capped   560/560
(100 %)
0 diff
(100 %id)
DA145934 amygdala .a 140 to 691 2 to 553 exact capped   552/552
(100 %)
0 diff
(100 %id)
DA219990 brain .a 140 to 676 2 to 538 exact capped   537/537
(100 %)
0 diff
(100 %id)
DA222254 brain .a 140 to 690 2 to 552 exact capped   551/551
(100 %)
0 diff
(100 %id)
DA249443 brain .a 140 to 694 2 to 556 exact capped   555/555
(100 %)
0 diff
(100 %id)
DA344063 substantia nigra .a 140 to 694 2 to 556 exact capped   555/555
(100 %)
0 diff
(100 %id)
DA429160 colon .a 140 to 559 2 to 421   capped   420/420
(100 %)
0 diff
(100 %id)
DA609368   .a 140 to 704 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DA619451   .a 140 to 734 2 to 596 exact capped   595/595
(100 %)
0 diff
(100 %id)
DA836119 placenta .a 140 to 396 2 to 258   capped   257/257
(100 %)
0 diff
(100 %id)
DB196008 trachea .a 140 to 661 2 to 523 V134X capped   522/522
(100 %)
0 diff
(100 %id)
DB260317 uterus .a 140 to 705 2 to 567 exact capped   566/566
(100 %)
0 diff
(100 %id)
DA226380 brain .a 142 to 612 2 to 472 G137X capped   471/471
(100 %)
0 diff
(100 %id)
BP196009 adrenal gland .a 143 to 724 1 to 582 exact     582/582
(100 %)
0 diff
(100 %id)
DA426429 colon .a 144 to 607 2 to 465   capped   464/464
(100 %)
0 diff
(100 %id)
CN423737 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 147 to 869 1 to 724 exact     724/724
(100 %)
6 diff
(99.2 %id)
BQ219668 epithelioid carcinoma, Pancreas .a 149 to 997 874 to 15 S2V G3R S4F M5Q A6W ...   Submitted on the opposite strand 860/876
(98 %)
15 diff
(98.3 %id)
TI_57239584   .a 149 to 873 18 to 743 S11*     726/743
(97 %)
6 diff
(99.2 %id)
TI_57229264   .a 150 to 944 52 to 848 exact     797/797
(100 %)
2 diff
(99.8 %id)
BG575992 breast, mammary adenocarcinoma, cell line .a 151 to 1032 1 to 880 exact     880/985
(89 %)
24 diff
(97.6 %id)
BI870271 adenocarcinoma, cell line, Liver .a 151 to 944 1 to 796 exact     796/796
(100 %)
2 diff
(99.8 %id)
BP197323 adrenal gland .a 152 to 732 1 to 581 exact     581/581
(100 %)
0 diff
(100 %id)
CR591022 B cells (Ramos cell line) .a 152 to 1892 1 to 1741 exact     1741/1741
(100 %)
0 diff
(100 %id)
CR599834 Placenta Cot 25-normalized .a 152 to 1869 1 to 1718 exact     1718/1718
(100 %)
0 diff
(100 %id)
BI869460 adenocarcinoma, cell line, Liver .a 152 to 930 1 to 780 exact     780/781
(99 %)
3 diff
(99.7 %id)
BU153252 embryonal carcinoma, cell line, testis .a 152 to 1071 1 to 913 exact     913/914
(99 %)
12 diff
(98.7 %id)
BQ712189 Spleen .a 152 to 983 1 to 837 exact     837/871
(96 %)
8 diff
(99.1 %id)
TI_57228679   .a 152 to 930 53 to 832 exact     780/781
(99 %)
3 diff
(99.7 %id)
CV572691 cornea, eye .a 152 to 768 1 to 617 exact     617/617
(100 %)
0 diff
(100 %id)
BF984319 duodenal adenocarcinoma, cell line, small intestine .a 153 to 831 1 to 678 exact     678/678
(100 %)
2 diff
(99.8 %id)
CX781349 human embryonic stem cells .a 153 to 948 1 to 796 exact     796/796
(100 %)
0 diff
(100 %id)
CN423731 embryonic stem cells, DMSO-treated H9 cellline .a 154 to 791 1 to 638 exact     638/638
(100 %)
0 diff
(100 %id)
CR593982 Neuroblastoma Cot 25-normalized .a 154 to 1863 1 to 1710 exact     1710/1710
(100 %)
0 diff
(100 %id)
CR601351 neuroblastoma .a 154 to 2045 1 to 1892 exact tiling clone,   1892/1892
(100 %)
0 diff
(100 %id)
CR610534 Placenta Cot 25-normalized .a 154 to 1881 1 to 1728 exact     1728/1728
(100 %)
0 diff
(100 %id)
CR611151 Placenta Cot 25-normalized .a 154 to 1867 1 to 1714 exact     1714/1714
(100 %)
0 diff
(100 %id)
CR611325 T cells (Jurkat cell line) .a 154 to 1872 1 to 1719 exact     1719/1719
(100 %)
0 diff
(100 %id)
CR614836 Neuroblastoma Cot 10-normalized .a 154 to 1869 1 to 1716 exact     1716/1716
(100 %)
0 diff
(100 %id)
CA394948 eye, RPE/choroid .a 154 to 661 1 to 508 exact     508/508
(100 %)
0 diff
(100 %id)
BQ228352 large cell carcinoma, lung .a 154 to 1111 1 to 966 exact     966/997
(96 %)
16 diff
(98.4 %id)
CB132787 Liver .a 154 to 730 1 to 577 exact     577/577
(100 %)
0 diff
(100 %id)
CR986054 T-Lymphocytes .a 154 to 1056 1 to 907 exact     907/908
(99 %)
8 diff
(99.2 %id)
DA980857 synovial membrane tissue from rheumatioidarthritis .a 154 to 725 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
BM461900 leiomyosarcoma, uterus .a 155 to 1023 1 to 879 exact AAA   879/899
(97 %)
15 diff
(98.4 %id)
BU149160 hepatocellular carcinoma, cell line, Liver .a 156 to 902 1 to 755 exact     755/856
(88 %)
17 diff
(98.1 %id)
CX166361 human embryonic stem cells differentiated toan early endodermal cell type .a 156 to 961 1 to 805 exact     805/805
(100 %)
1 diff
(99.9 %id)
CX873745 embryonic stem .a 156 to 987 1 to 832 exact     832/832
(100 %)
0 diff
(100 %id)
CF127750 Chondrosarcoma Lung Metastasis cell lines, lung .a 157 to 960 1 to 806 exact     806/806
(100 %)
3 diff
(99.7 %id)
TI_154193425   .a 157 to 1128 51 to 1011 exact     961/1024
(93 %)
29 diff
(97.2 %id)
CR591474 Neuroblastoma Cot 10-normalized .a 160 to 1871 1 to 1712 exact     1712/1712
(100 %)
0 diff
(100 %id)
TI_45236378   .a 163 to 907 31 to 785   AAA   755/1202
(62 %)
34 diff
(97.2 %id)
TI_154151858   .a 165 to 828 82 to 742       661/675
(97 %)
11 diff
(98.4 %id)
AA338102 endometrium .a 171 to 493 1 to 321       321/336
(95 %)
5 diff
(98.6 %id)
CR740619 liver and spleen .a 176 to 879 1 to 704       704/704
(100 %)
0 diff
(100 %id)
CX865400 embryonic stem .a 176 to 959 1 to 784       784/784
(100 %)
1 diff
(99.9 %id)
BE908232 epithelioid carcinoma, Pancreas .a 182 to 881 1 to 704       704/704
(100 %)
5 diff
(99.3 %id)
AW392529 stomach .a 186 to 823 638 to 1       638/639
(99 %)
6 diff
(99.1 %id)
CN423740 embryonic stem cells, cell lines H1, H7, andH9 .a 194 to 891 1 to 699       699/699
(100 %)
3 diff
(99.6 %id)
TI_154143303   .a 197 to 763 83 to 649       567/567
(100 %)
1 diff
(99.9 %id)
BE936340 nervous_tumor .a 213 to 784 584 to 13       572/584
(97 %)
2 diff
(99.7 %id)
AW608289 leiomios .a 217 to 871 689 to 35       655/689
(95 %)
3 diff
(99.6 %id)
CN423735 embryonic stem cells, cell lines H1, H7, andH9 .a 224 to 609 1 to 386       386/386
(100 %)
0 diff
(100 %id)
CD689335 normal nasopharynx .a 235 to 493 21 to 282       262/288
(90 %)
12 diff
(95.9 %id)
BF800736 colon_ins .a 248 to 725 490 to 12     Submitted on the opposite strand 479/490
(97 %)
1 diff
(99.8 %id)
BI260975 cervical carcinoma cell line, cervix .a 256 to 1068 1 to 812       812/812
(100 %)
16 diff
(98.1 %id)
AW392532 stomach .a 260 to 811 553 to 1       553/553
(100 %)
9 diff
(98.4 %id)
FN068510 breast carcinoma .a 261 to 332 1 to 72       72/73
(98 %)
1 diff
(98.7 %id)
BF758870 colon .a 274 to 493 1 to 218       218/230
(94 %)
3 diff
(98.7 %id)
BU192472 epithelioid carcinoma, Pancreas .a 284 to 713 1 to 442       442/956
(46 %)
14 diff
(98.6 %id)
AI174700 Liver .a 313 to 933 621 to 1       621/621
(100 %)
2 diff
(99.7 %id)
CX865374 embryonic stem .a 313 to 972 1 to 660     Submitted on the opposite strand 660/660
(100 %)
0 diff
(100 %id)
BE083129 breast .a 373 to 604 233 to 1     Submitted on the opposite strand 233/340
(68 %)
3 diff
(99.2 %id)
D60569   .a 387 to 587 1 to 201       201/201
(100 %)
0 diff
(100 %id)
BI012903 lung_tumor .a 417 to 874 479 to 23       457/479
(95 %)
2 diff
(99.6 %id)
CD671547 eye, Iris .a 464 to 973 509 to 4   fully sequenced,   506/509
(99 %)
0 diff
(100 %id)
BG680476 skin, squamous cell carcinoma .a 469 to 1309 1 to 840       840/843
(99 %)
10 diff
(98.9 %id)
CN423732 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 472 to 1036 9 to 573       565/573
(98 %)
0 diff
(100 %id)
AW892368 nervous_normal .a 501 to 716 238 to 24       215/248
(86 %)
0 diff
(100 %id)
BF336934 colon .a 502 to 929 434 to 10       425/439
(96 %)
0 diff
(100 %id)
BM850082 myeloma .a 518 to 1096 1 to 579       579/579
(100 %)
0 diff
(100 %id)
CU450874 epidermis .a 537 to 771 1 to 235       235/235
(100 %)
4 diff
(98.3 %id)
AW978187   .a 539 to 1173 635 to 1     Submitted on the opposite strand 635/641
(99 %)
1 diff
(99.9 %id)
BU627259 Bone, Enchondroma cell line .a 544 to 1262 737 to 19   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 719/719
(100 %)
0 diff
(100 %id)
EC583739 Prostate .a 608 to 705 105 to 9       97/105
(92 %)
0 diff
(100 %id)
CX782835 human embryonic stem cells .a 750 to 1262 537 to 25   fully sequenced, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 513/513
(100 %)
0 diff
(100 %id)
BX415486 thymus .a 982 to 1828 840 to 1       840/840
(100 %)
16 diff
(98.1 %id)
AL581573 B cells (Ramos cell line), B cells from Burkitt lymphoma .a 1041 to 1882 845 to 1       845/845
(100 %)
5 diff
(99.5 %id)
BX377241 Placenta Cot 25-normalized .a 1081 to 1846 768 to 1       768/970
(79 %)
12 diff
(98.8 %id)
TI_45236182   .a 1211 to 1848 648 to 9       640/648
(98 %)
0 diff
(100 %id)
D53701   .a 1397 to 1766 369 to 1       369/369
(100 %)
3 diff
(99.2 %id)
AW439438 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 1567 to 1902 345 to 10   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 336/345
(97 %)
0 diff
(100 %id)
AK098148 trachea .a 1936 to 4356 1 to 2420   tiling clone, available from FLJ,   2420/2420
(100 %)
3 diff
(99.9 %id)
AW136772   .a 2157 to 2585 444 to 16   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 429/444
(96 %)
0 diff
(100 %id)
AA649048 germinal center B cell .a 2253 to 2773 528 to 8   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 521/528
(98 %)
0 diff
(100 %id)
BX114608 eye, retina .a 2273 to 2962 1 to 690   tiling clone,   690/690
(100 %)
0 diff
(100 %id)
AI433610 lymph node, lymphoma, follicular mixed small and largecell .a 2347 to 2770 424 to 1       424/424
(100 %)
0 diff
(100 %id)
AA737520 germinal center B cell .a 2430 to 2773 351 to 8   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 344/351
(98 %)
0 diff
(100 %id)
AK125218   .a 2533 to 4360 1 to 1828   tiling clone, available from FLJ,   1828/1828
(100 %)
3 diff
(99.9 %id)
BF917911 uterus_tumor .a 2620 to 2941 328 to 8     Submitted on the opposite strand 321/328
(97 %)
0 diff
(100 %id)
DB522789 testis .a 2646 to 3110 1 to 465     Submitted on the opposite strand 465/465
(100 %)
0 diff
(100 %id)
TI_154140131   .a 2664 to 3137 80 to 553       474/474
(100 %)
0 diff
(100 %id)
BX952506   .a 3243 to 3858 1 to 616       616/616
(100 %)
0 diff
(100 %id)
CR618100 HeLa cells Cot 25-normalized .a 3655 to 4355 1 to 701   tiling clone,   701/701
(100 %)
0 diff
(100 %id)
BX362509   .a 3656 to 4257 609 to 1       609/609
(100 %)
0 diff
(100 %id)
AW893932 nervous_normal .a 3712 to 4292 583 to 1       583/585
(99 %)
8 diff
(98.7 %id)
BU160728 melanotic melanoma, skin .b 1 to 819 12 to 830 exact tiling clone,   819/832
(98 %)
12 diff
(98.6 %id)
CR601527 Placenta Cot 25-normalized .c 1 to 1658 1 to 1658 exact tiling clone,   1658/1658
(100 %)
0 diff
(100 %id)
BX647922 cervix .d 1 to 2473 1 to 2473 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 2473/2473
(100 %)
0 diff
(100 %id)
BG426578 Kidney .d 1 to 779 1 to 780 F117L V118C C120V L121F Y122I ...     780/967
(80 %)
31 diff
(96.8 %id)
AW131168 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 1973 to 2474 502 to 1       502/502
(100 %)
0 diff
(100 %id)
AW835598 leiomios .e 1 to 649 10 to 654 E6R V7F L8C L9W E10N ... tiling clone,   647/661
(97 %)
14 diff
(97.9 %id)
AA455690 germinal center B cell .e 269 to 725 1 to 457   tiling clone,   457/457
(100 %)
0 diff
(100 %id)
BU147410 Spleen .e 280 to 987 23 to 739       717/964
(74 %)
19 diff
(98.1 %id)
BX481351   .e 286 to 864 1 to 580       580/580
(100 %)
4 diff
(99.4 %id)
BM829419 Ascites, stomach .e 634 to 1228 1 to 595   tiling clone,   595/595
(100 %)
0 diff
(100 %id)
AA455637 germinal center B cell .e 847 to 1301 455 to 1       455/455
(100 %)
2 diff
(99.6 %id)
CN263832 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 862 to 1094 1 to 235       235/235
(100 %)
3 diff
(98.8 %id)
DW443338 Liver .e 972 to 1186 17 to 231       215/231
(93 %)
6 diff
(97.5 %id)
DW444967 Liver .e 972 to 1179 17 to 224       208/224
(92 %)
6 diff
(97.4 %id)
CN429109 embryonic stem cells, DMSO-treated H9 cellline .e 1194 to 1788 31 to 625   tiling clone,   595/625
(95 %)
6 diff
(99.1 %id)
BX092356 carcinoid, lung .e 1306 to 1806 1 to 501       501/501
(100 %)
1 diff
(99.9 %id)
BE671393 carcinoid, lung .e 1425 to 1870 446 to 1   tiling clone,   446/446
(100 %)
0 diff
(100 %id)
AI343009 carcinoid, lung .e 1441 to 1865 425 to 1       425/425
(100 %)
2 diff
(99.6 %id)
BE770822 prostate_tumor .e 1794 to 2203 11 to 417   tiling clone,   407/417
(97 %)
6 diff
(98.6 %id)
H58654.
matches multiple genes
liver and spleen .e 1834 to 2252 440 to 20   tiling clone, also hits gene SLC35D1 421/446
(94 %)
0 diff
(100 %id)
N66767 cochlea, ear .e 1879 to 2253 403 to 25   AAA   379/394
(96 %)
0 diff
(100 %id)
AA701345 liver and spleen .e 2053 to 2269 217 to 1       217/217
(100 %)
5 diff
(97.7 %id)
BX509395   .e 2142 to 2677 1 to 535   tiling clone,   535/535
(100 %)
3 diff
(99.5 %id)
CN264750 embryonic stem cells, cell lines H1, H7, andH9 .e 2223 to 2869 12 to 656   tiling clone,   645/656
(98 %)
6 diff
(99.1 %id)
AA308922 colon .f-u 1 to 423 1 to 423   tiling clone,   423/423
(100 %)
0 diff
(100 %id)
BX093913 liver and spleen .f-u 393 to 1115 1 to 723 exact tiling clone,   723/723
(100 %)
1 diff
(99.9 %id)
T84214 liver and spleen .f-u 393 to 817 1 to 433 exact     433/433
(100 %)
12 diff
(97.3 %id)
Z43709 brain, total brain .f-u 566 to 925 1 to 359       359/359
(100 %)
1 diff
(99.8 %id)
R05654 whole brain .f-u 567 to 754 1 to 187       187/190
(98 %)
2 diff
(99.0 %id)
DW414457 Liver .f-u 752 to 1052 16 to 316       301/316
(95 %)
6 diff
(98.2 %id)
DW424965 Liver .f-u 752 to 1023 16 to 287       272/287
(94 %)
8 diff
(97.3 %id)
FN100904 breast carcinoma .f-u 822 to 920 96 to 1     Submitted on the opposite strand 96/97
(98 %)
4 diff
(95.9 %id)
T88910 liver and spleen .f-u 900 to 1313 414 to 1       414/414
(100 %)
1 diff
(99.8 %id)
BQ880077 ductal carcinoma, cell line, Pancreas .f-u 915 to 1660 1 to 759   tiling clone,   759/948
(80 %)
21 diff
(97.8 %id)
AI809274 pooled .f-u 916 to 1316 401 to 1       401/401
(100 %)
1 diff
(99.8 %id)
AW451469   .f-u 967 to 1313 364 to 18   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 347/347
(100 %)
0 diff
(100 %id)
BG167899 hypernephroma, cell line, Kidney .f-u 1102 to 1731 1 to 620   tiling clone,   620/911
(68 %)
13 diff
(98.6 %id)
BE828060 lung_tumor .f-u 1732 to 1949 52 to 272   tiling clone,   221/272
(81 %)
6 diff
(97.8 %id)
AA283804 germinal center B cell .f-u 1900 to 2322 423 to 1   tiling clone,   423/424
(99 %)
4 diff
(99.1 %id)
F02998 brain, total brain .f-u 1969 to 2322 354 to 1   tiling clone,   354/354
(100 %)
3 diff
(99.2 %id)
BY997016   .g-u 1 to 661 23 to 683 exact tiling clone,   661/683
(96 %)
6 diff
(99.2 %id)
AW837148 leiomios .g-u 71 to 586 1 to 516 exact     516/516
(100 %)
4 diff
(99.3 %id)
CR736027 liver and spleen .g-u 260 to 986 1 to 727       727/727
(100 %)
3 diff
(99.6 %id)
T80674.
matches multiple genes
liver and spleen .g-u 260 to 609 1 to 357     also hits gene feetarby 357/357
(100 %)
8 diff
(97.8 %id)
T84135.
matches multiple genes
liver and spleen .g-u 260 to 584 1 to 335     also hits gene smarjaw 335/407
(82 %)
11 diff
(97.3 %id)
H73817 liver and spleen .g-u 401 to 802 1 to 406   fully sequenced,   406/406
(100 %)
9 diff
(97.8 %id)
AW392524 stomach .g-u 557 to 841 286 to 3       284/286
(99 %)
0 diff
(100 %id)
BF810364 colon_ins .g-u 611 to 989 382 to 4     Submitted on the opposite strand 379/382
(99 %)
6 diff
(98.5 %id)
BF810472 colon_ins .g-u 611 to 989 382 to 4     Submitted on the opposite strand 379/382
(99 %)
6 diff
(98.5 %id)
BM782558 stomach .g-u 642 to 1224 1 to 583   tiling clone,   583/583
(100 %)
0 diff
(100 %id)
TI_59384435   .g-u 650 to 1294 57 to 705       649/679
(95 %)
11 diff
(98.4 %id)
BU156556 eye, retinoblastoma .g-u 668 to 1510 1 to 852       852/859
(99 %)
15 diff
(98.3 %id)
BU507949 leiomyosarcoma, uterus .g-u 669 to 1822 1 to 1142       1142/1143
(99 %)
28 diff
(97.6 %id)
BG575163 breast, mammary adenocarcinoma, cell line .g-u 674 to 1507 1 to 835       835/837
(99 %)
13 diff
(98.5 %id)
CU456844 epidermis .g-u 709 to 906 209 to 12     Submitted on the opposite strand 198/209
(94 %)
0 diff
(100 %id)
AW582387 stomach .g-u 710 to 929 230 to 12       219/234
(93 %)
0 diff
(100 %id)
DA233234 brain .g-u 731 to 1316 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
AW582390 stomach .g-u 761 to 929 168 to 1       168/168
(100 %)
4 diff
(97.7 %id)
T24902   .g-u 771 to 957 187 to 1       187/189
(98 %)
0 diff
(100 %id)
AI080684 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g-u 772 to 1188 417 to 1       417/417
(100 %)
0 diff
(100 %id)
H73591 liver and spleen .g-u 783 to 1189 415 to 1   fully sequenced,   415/415
(100 %)
8 diff
(98.1 %id)
BG697738 skin .g-u 785 to 1550 1 to 771       771/772
(99 %)
7 diff
(99.1 %id)
FN121507 breast carcinoma .g-u 796 to 907 1 to 114       114/114
(100 %)
3 diff
(97.4 %id)
AW235051 Kidney .g-u 800 to 1280 481 to 1       481/481
(100 %)
0 diff
(100 %id)
BE645922 Prostate .g-u 810 to 1280 478 to 8   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 471/478
(98 %)
0 diff
(100 %id)
GD157517   .g-u 878 to 1199 1 to 322       322/334
(96 %)
10 diff
(97.1 %id)
AI565353 Kidney .g-u 916 to 1189 274 to 1       274/274
(100 %)
0 diff
(100 %id)
FN091951 breast carcinoma .g-u 929 to 1047 115 to 1     Submitted on the opposite strand 115/115
(100 %)
4 diff
(96.6 %id)
AA975223 pooled germ cell tumors .g-u 966 to 1283 318 to 1       318/318
(100 %)
0 diff
(100 %id)
BX433637 neuroblastoma .g-u 994 to 1895 902 to 7       896/903
(99 %)
0 diff
(100 %id)
TI_59384975   .g-u 1045 to 1867 102 to 931       830/861
(96 %)
22 diff
(97.5 %id)
TI_149314970   .g-u 1077 to 1910 913 to 99   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 815/1037
(78 %)
0 diff
(100 %id)
AW991537 breast_normal .g-u 1080 to 1362 274 to 3     Submitted on the opposite strand 272/283
(96 %)
0 diff
(100 %id)
BF033116 adenocarcinoma, ovary .g-u 1157 to 1895 718 to 1     Submitted on the opposite strand 718/894
(80 %)
32 diff
(96.5 %id)
AA131957 uterus .g-u 1167 to 1526 1 to 365   fully sequenced,   365/365
(100 %)
1 diff
(99.8 %id)
BU736583 eye, Retina Foveal and Macular .g-u 1204 to 1902 1 to 698   fully sequenced, Submitted on the opposite strand 698/698
(100 %)
6 diff
(99.2 %id)
BE813230 breast_normal .g-u 1208 to 1362 158 to 3       156/158
(98 %)
0 diff
(100 %id)
TI_57180175   .g-u 1213 to 1894 153 to 830       678/830
(81 %)
6 diff
(99.3 %id)
BM760116 Ascites, stomach .g-u 1217 to 1685 1 to 469   tiling clone,   469/469
(100 %)
0 diff
(100 %id)
BM771314 Ascites, stomach .g-u 1217 to 1649 1 to 433       433/433
(100 %)
0 diff
(100 %id)
BM771349 Ascites, stomach .g-u 1217 to 1685 1 to 469       469/469
(100 %)
0 diff
(100 %id)
AA173540   .g-u 1226 to 1609 1 to 390   fully sequenced,   390/390
(100 %)
8 diff
(98.0 %id)
AA173599   .g-u 1226 to 1607 1 to 391   fully sequenced,   391/391
(100 %)
8 diff
(98.0 %id)
FN148716 breast carcinoma .g-u 1237 to 1357 1 to 120       120/120
(100 %)
3 diff
(97.5 %id)
BE813213 breast_normal .g-u 1240 to 1362 126 to 3       124/126
(98 %)
0 diff
(100 %id)
BM999616 lung, Lung Focal Fibrosis .g-u 1281 to 1914 1 to 635   tiling clone, AAA Submitted on the opposite strand 635/635
(100 %)
7 diff
(98.9 %id)
FN120314 breast carcinoma .g-u 1285 to 1398 115 to 1     Submitted on the opposite strand 115/115
(100 %)
3 diff
(97.4 %id)
CA311905 Human Lung Epithelial cells, lung .g-u 1402 to 1716 77 to 391     Submitted on the opposite strand 315/391
(80 %)
6 diff
(98.5 %id)
AW893549 nervous_normal .g-u 1439 to 1704 265 to 1       265/266
(99 %)
8 diff
(97.0 %id)
AW805422 uterus .g-u 1459 to 1606 155 to 8       148/155
(95 %)
0 diff
(100 %id)
BF083437 colon .g-u 1459 to 1587 137 to 11       127/137
(92 %)
0 diff
(100 %id)
TI_149281091   .g-u 1461 to 1908 530 to 82   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 449/787
(57 %)
0 diff
(100 %id)
AI276665 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g-u 1476 to 1910 466 to 32   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 435/466
(93 %)
0 diff
(100 %id)
BM841812 lymph node, stomach .g-u 1489 to 1865 1 to 377       377/377
(100 %)
0 diff
(100 %id)
AA131870 uterus .g-u 1496 to 1914 422 to 1   tiling clone, fully sequenced,   422/422
(100 %)
0 diff
(100 %id)
BJ991795 hepatoblastoma .g-u 1508 to 1896 392 to 1       392/392
(100 %)
5 diff
(98.8 %id)
FN081355 breast carcinoma .g-u 1525 to 1616 1 to 90       90/91
(98 %)
4 diff
(95.7 %id)
AA769471 germinal center B cell .g-u 1533 to 1903 371 to 1       371/371
(100 %)
0 diff
(100 %id)
AI141364 parathyroid gland, parathyroid tumor .g-u 1550 to 1912 375 to 13   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 363/375
(96 %)
0 diff
(100 %id)
AA835965 germinal center B cell .g-u 1575 to 1915 349 to 9       341/349
(97 %)
0 diff
(100 %id)
AA765730 germinal center B cell .g-u 1576 to 1912 357 to 21   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 337/357
(94 %)
0 diff
(100 %id)
AA173973   .g-u 1577 to 1919 351 to 3   fully sequenced,   349/351
(99 %)
5 diff
(98.6 %id)
AA173896   .g-u 1579 to 1919 341 to 2   fully sequenced,   340/341
(99 %)
5 diff
(98.6 %id)
AA918239 Kidney .g-u 1583 to 1914 332 to 1       332/332
(100 %)
0 diff
(100 %id)
BF589578 Prostate .g-u 1673 to 1912 240 to 1       240/240
(100 %)
0 diff
(100 %id)
FN168114 breast carcinoma .g-u 1681 to 1800 1 to 115       115/115
(100 %)
5 diff
(95.7 %id)
FN056252 breast carcinoma .g-u 1714 to 1827 1 to 114       114/114
(100 %)
0 diff
(100 %id)
FN152686 breast carcinoma .g-u 1825 to 1901 1 to 77       77/82
(93 %)
6 diff
(92.7 %id)
BM704258 eye, Retina Foveal and Macular .g-u 1827 to 1921 114 to 20   fully sequenced, Submitted on the opposite strand 95/114
(83 %)
5 diff
(95.7 %id)
BG548825 lung .h-u 1 to 779 3 to 786 exact tiling clone,   786/870
(90 %)
14 diff
(98.4 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g-u, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC