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Gene NKAPP1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
49 supporting clones for gene NKAPP1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB004517 breast, tumor tissue .a 1 to 572 2 to 575 exact tiling clone, capped   574/574
(100 %)
2 diff
(99.7 %id)
BX490448   .a 23 to 378 1 to 356       356/356
(100 %)
1 diff
(99.8 %id)
DW463186 Liver .a 56 to 401 18 to 363       346/363
(95 %)
6 diff
(98.4 %id)
BM798637 myeloma .a 61 to 359 1 to 299       299/299
(100 %)
1 diff
(99.7 %id)
DW412579 Liver .a 80 to 402 1 to 323   tiling clone,   323/323
(100 %)
6 diff
(98.2 %id)
NR_027131.1   .b 1 to 2418 1 to 2418 exact RefSeq, tiling clone, AAA   2418/2418
(100 %)
0 diff
(100 %id)
DA951669 Spleen .b 32 to 600 2 to 571 exact capped   570/570
(100 %)
4 diff
(99.3 %id)
AK093895 trachea .b 35 to 2418 1 to 2384 exact available from FLJ,   2384/2384
(100 %)
2 diff
(100.0 %id)
AX748357   .b 35 to 2418 1 to 2384 exact     2384/2384
(100 %)
2 diff
(100.0 %id)
DB202379 trachea .b 36 to 608 2 to 574 exact capped   573/573
(100 %)
1 diff
(99.9 %id)
BX490668   .b 56 to 504 1 to 449       449/455
(98 %)
3 diff
(99.4 %id)
DA017113 adrenal gland .b 58 to 579 2 to 523 exact capped   522/522
(100 %)
0 diff
(100 %id)
DA017116 adrenal gland .b 58 to 580 2 to 525 R26L N28E V29C L30V Q31A ... capped   524/524
(100 %)
1 diff
(99.9 %id)
DA226807 brain .b 58 to 616 2 to 560 exact capped   559/559
(100 %)
1 diff
(99.9 %id)
BG527810 lung, mucoepidermoid carcinoma .b 60 to 682 1 to 624 exact available from MGC,   624/624
(100 %)
2 diff
(99.7 %id)
BC022359 Lung, mucoepidermoid carcinoma .b 61 to 2414 1 to 2354 exact available from MGC, AAA   2354/2354
(100 %)
0 diff
(100 %id)
TI_1243020393   .b 62 to 1173 48 to 1167 exact     1120/1239
(90 %)
25 diff
(98.0 %id)
TI_1243021285   .b 62 to 1046 246 to 1217 exact AAA Submitted on the opposite strand 972/1217
(79 %)
29 diff
(97.7 %id)
TI_1243022781   .b 62 to 705 648 to 3 exact     646/803
(80 %)
0 diff
(100 %id)
BC113730 Lung, PCR rescued clones .b 62 to 1616 1 to 1555 exact     1555/1555
(100 %)
0 diff
(100 %id)
BC113732 Lung, PCR rescued clones .b 62 to 1616 1 to 1555 exact     1555/1555
(100 %)
0 diff
(100 %id)
TI_1243022777   .b 81 to 1087 1016 to 13 R5W L30C Q31S F32L V33S ...     1004/1017
(98 %)
11 diff
(99.0 %id)
TI_1243022787   .b 217 to 1097 883 to 5       879/890
(98 %)
6 diff
(99.4 %id)
AW611964 Kidney .b 233 to 667 435 to 1       435/435
(100 %)
4 diff
(99.1 %id)
AW013941   .b 352 to 668 331 to 15   AAA   317/317
(100 %)
0 diff
(100 %id)
TI_1243022795   .b 409 to 1448 1045 to 9       1037/1052
(98 %)
15 diff
(98.6 %id)
AI371752 pooled germ cell tumors .b 454 to 891 438 to 1       438/438
(100 %)
1 diff
(99.8 %id)
AI632568 pooled germ cell tumors .b 460 to 891 432 to 1       432/432
(100 %)
1 diff
(99.8 %id)
AI989963 pooled germ cell tumors .b 460 to 894 435 to 1       435/435
(100 %)
2 diff
(99.6 %id)
AW237101 pooled germ cell tumors .b 460 to 891 432 to 1       432/432
(100 %)
1 diff
(99.8 %id)
BF057644 pooled germ cell tumors .b 460 to 891 432 to 1       432/432
(100 %)
1 diff
(99.8 %id)
AW002536 pooled germ cell tumors .b 482 to 891 409 to 1       409/409
(100 %)
3 diff
(99.3 %id)
TI_1243020395   .b 587 to 1616 1096 to 61       1036/1269
(81 %)
8 diff
(99.4 %id)
CR743374 lung .b 1125 to 1603 1 to 479       479/479
(100 %)
0 diff
(100 %id)
TI_1243022783   .b 1224 to 1616 1 to 391       391/971
(40 %)
6 diff
(99.4 %id)
BM512235 insulinoma, Pancreas .b 1391 to 1969 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
CK905716 insulinoma, Pancreas .b 1399 to 1859 1 to 461       461/461
(100 %)
12 diff
(97.4 %id)
CK905715 insulinoma, Pancreas .b 1815 to 2418 620 to 17   AAA   604/604
(100 %)
1 diff
(99.9 %id)
BM511996 insulinoma, Pancreas .b 1851 to 2418 583 to 16   AAA   568/568
(100 %)
1 diff
(99.9 %id)
DB348410 trachea .b 1873 to 2418 546 to 1       546/546
(100 %)
0 diff
(100 %id)
BF591912 Kidney .b 1942 to 2418 477 to 1       477/477
(100 %)
3 diff
(99.4 %id)
BX490669   .b 1947 to 2418 493 to 22   AAA   472/472
(100 %)
0 diff
(100 %id)
AI017557 pooled .b 1962 to 2421 460 to 1       460/460
(100 %)
1 diff
(99.8 %id)
AI040099 liver and spleen .b 2100 to 2424 328 to 4       325/328
(99 %)
0 diff
(100 %id)
AI203802 lung .b 2162 to 2422 264 to 1       264/264
(100 %)
5 diff
(98.2 %id)
BX537594 human retina .c-u 1 to 4940 40 to 4972 exact tiling clone, available from DKFZ,   4933/4933
(100 %)
14 diff
(99.8 %id)
BQ638190 eye, retina .d 1 to 600 1 to 596 exact tiling clone,   596/596
(100 %)
2 diff
(99.7 %id)
BU741292 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 1 to 608 12 to 619   tiling clone, Submitted on the opposite strand 608/619
(98 %)
7 diff
(98.9 %id)
BM727047 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 25 to 769 743 to 1   tiling clone, Submitted on the opposite strand 743/743
(100 %)
3 diff
(99.6 %id)
DA196773 amygdala .e 737 to 1292 2 to 557   tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
TI_154109401   .f-u 1 to 919 962 to 49 exact tiling clone,   911/1079
(84 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d, .e, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes