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Gene CXorf1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
27 supporting clones for gene CXorf1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA126332 cerebellum .a-u 1 to 604 2 to 603   tiling clone, to resequence, capped   602/602
(100 %)
2 diff
(99.7 %id)
DN990932 brain, whole brain .a-u 959 to 1679 1 to 722   tiling clone,   722/722
(100 %)
6 diff
(99.2 %id)
NM_004709.2   .a-u 1180 to 3620 1 to 2441 exact RefSeq, AAA   2441/2441
(100 %)
0 diff
(100 %id)
Y08902   .a-u 1180 to 3620 1 to 2441 exact tiling clone,   2441/2441
(100 %)
1 diff
(100.0 %id)
BC113600 Brain, cerebral cortex, PCR rescued clones .a-u 1311 to 3207 1 to 1897 exact     1897/1897
(100 %)
3 diff
(99.9 %id)
BC113604 Brain, cerebral cortex, PCR rescued clones .a-u 1311 to 3207 1 to 1897 exact     1897/1897
(100 %)
2 diff
(99.9 %id)
DA059799 cerebellum .a-u 1602 to 2170 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
AF007148 brain .a-u 1729 to 3620 1 to 1892   AAA   1892/1892
(100 %)
1 diff
(100.0 %id)
T77107 whole brain .a-u 1779 to 2141 1 to 361       361/364
(99 %)
13 diff
(96.5 %id)
TI_1243018611   .a-u 2043 to 3207 1203 to 57     Submitted on the opposite strand 1147/1245
(92 %)
0 diff
(100 %id)
R59087 whole brain .a-u 2092 to 2575 501 to 4       498/503
(99 %)
0 diff
(100 %id)
Z41623 brain, total brain .a-u 2247 to 2570 324 to 1       324/324
(100 %)
0 diff
(100 %id)
TI_1243020167   .a-u 2255 to 3208 10 to 963       954/1245
(76 %)
4 diff
(99.7 %id)
TI_1243021067   .a-u 2269 to 3208 14 to 952       939/1201
(78 %)
4 diff
(99.7 %id)
TI_1243020177   .a-u 2481 to 3207 15 to 741       727/1243
(58 %)
3 diff
(99.8 %id)
AA625425 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a-u 2634 to 3053 1 to 420       420/420
(100 %)
5 diff
(98.9 %id)
N54868 multiple sclerosis lesions .a-u 2869 to 3122 1 to 254       254/254
(100 %)
0 diff
(100 %id)
AL134413 brain .a-u 2986 to 3600 1 to 615   tiling clone,   615/615
(100 %)
0 diff
(100 %id)
TI_151731415   .a-u 2994 to 3573 663 to 83   AAA   581/986
(58 %)
2 diff
(99.8 %id)
BQ189156 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a-u 2999 to 3573 7 to 581   fully sequenced, AAA   575/581
(98 %)
6 diff
(99.0 %id)
DB300840 cerebellum .a-u 3016 to 3573 558 to 1   to resequence,   558/558
(100 %)
3 diff
(99.5 %id)
BE703538 nervous_normal .a-u 3027 to 3394 10 to 378       369/380
(97 %)
13 diff
(96.6 %id)
BE671225 carcinoid, lung .a-u 3125 to 3575 454 to 4       451/454
(99 %)
0 diff
(100 %id)
BM723298 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a-u 3174 to 3585 1 to 412   fully sequenced, AAA   412/412
(100 %)
1 diff
(99.8 %id)
BX115389 whole brain .a-u 3206 to 3620 430 to 15   AAA   416/416
(100 %)
1 diff
(99.8 %id)
CK299331 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a-u 3265 to 3573 324 to 15   fully sequenced, AAA   310/310
(100 %)
1 diff
(99.7 %id)
R38176 whole brain .a-u 3290 to 3620 358 to 19   AAA   340/340
(100 %)
14 diff
(95.9 %id)
BM682305 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a-u 3321 to 3585 282 to 19   fully sequenced, AAA   264/264
(100 %)
1 diff
(99.7 %id)
DA190277 amygdala Gene CXorf1, variant not shown       capped      
DB528314 hippocampus Gene CXorf1, variant not shown         Submitted on the opposite strand    
AA053905 eye, retina Gene CXorf1, variant not shown              
AA054218 eye, retina Gene CXorf1, variant not shown              
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes