cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Accession match over (% length) |
Base differences relative to genome (% identity) |
DA008170 | .b | 1 to 539 | 6 to 544 | capped | 543/543 (100 %) | 0 diff (100 %id) | ||
AF469635 | .a | 1 to 1861 | 1 to 1861 | exact | tiling clone, | 1861/1867 (99 %) | 1 diff (100.0 %id) | |
AJ346279 | pectoral muscle (after mastectomy) | .a | 1528 to 1857 | 7 to 336 | AAA | 330/336 (98 %) | 0 diff (100 %id) | |
AJ573366 | pectoral muscle (after mastectomy) | .a | 1534 to 1857 | 1 to 324 | AAA | 324/324 (100 %) | 0 diff (100 %id) | |
AK313679 | colon | .b | 1 to 1168 | 2 to 1169 | T157I | 1169/1169 (100 %) | 1 diff (100.0 %id) | |
AY242128 | .b | 62 to 1168 | 1 to 1107 | exact | 1107/1107 (100 %) | 0 diff (100 %id) | ||
BC034403 | Brain, Lung, Testis, adult, pooled whole | .b | 24 to 1613 | 1 to 1590 | exact | available from MGC, AAA | 1590/1590 (100 %) | 1 diff (100.0 %id) |
DA208064 | brain | .c | 1 to 567 | 2 to 568 | tiling clone, capped | 567/567 (100 %) | 0 diff (100 %id) | |
BX091372 | adenocarcinoma, Pancreas | .a | 1460 to 1857 | 412 to 15 | AAA | 398/398 (100 %) | 1 diff (99.8 %id) | |
DA431914 | colon | .b | 1 to 577 | 2 to 579 | capped | 578/578 (100 %) | 2 diff (99.7 %id) | |
CV030267 | mixed | .b | 62 to 738 | 1 to 675 | 675/675 (100 %) | 3 diff (99.6 %id) | ||
FN148084 | breast carcinoma | .a | 1433 to 1537 | 1 to 103 | 103/103 (100 %) | 3 diff (97.1 %id) | ||
AI587350 | adenocarcinoma, Pancreas | .a | 1257 to 1857 | 617 to 13 | AAA | 605/605 (100 %) | 27 diff (95.6 %id) | |
BI821147 | pooled brain, lung, testis | .b | 24 to 770 | 1 to 749 | 749/749 (100 %) | 6 diff (99.2 %id) | ||
BI768435 | pooled lung and spleen | .b | 23 to 872 | 1 to 851 | 851/851 (100 %) | 12 diff (98.6 %id) | ||
BI911171 | leukocyte | .b | 13 to 834 | 1 to 822 | 822/864 (95 %) | 11 diff (98.8 %id) | ||
BQ052726 | blood, natural killer cells, cell line | .c | 371 to 1330 | 8 to 982 | tiling clone, AAA | 975/1047 (93 %) | 52 diff (95.1 %id) | |
BQ053710 | blood, natural killer cells, cell line | .b | 49 to 947 | 23 to 931 | 909/979 (92 %) | 21 diff (97.9 %id) | ||
CD246172 | mixed | .a | 316 to 944 | 20 to 659 | 640/883 (72 %) | 22 diff (97.6 %id) | ||
CO959977 | mixed | .a | 310 to 866 | 64 to 616 | 553/634 (87 %) | 29 diff (95.5 %id) | ||
TI_57197975 | .b | 19 to 770 | 27 to 780 | 754/780 (96 %) | 6 diff (99.3 %id) | |||
TI_57178601 | .b | 18 to 872 | 61 to 916 | 856/916 (93 %) | 12 diff (98.7 %id) | |||
TI_57231766 | .b | 13 to 834 | 1 to 822 | 822/864 (95 %) | 11 diff (98.8 %id) | |||
NM_001504.1 | .b | 1 to 1616 | 8 to 1623 | exact | RefSeq, AAA | 1623/1623 (100 %) | 0 diff (100 %id) | |
NM_001142797.1 | .a | 1 to 1860 | 8 to 1867 | exact | RefSeq, AAA | 1867/1867 (100 %) | 0 diff (100 %id) | |
TI_1948123355 | .a | 318 to 891 | 137 to 721 | fully sequenced, | 585/721 (81 %) | 0 diff (100 %id) | ||
TI_1948123356 | .a | 861 to 1416 | 668 to 122 | fully sequenced, | 547/668 (81 %) | 5 diff (99.3 %id) | ||
TI_1948123532 | .a | 310 to 819 | 132 to 643 | fully sequenced, | 512/643 (79 %) | 5 diff (99.3 %id) | ||
TI_1948123533 | .a | 789 to 1416 | 763 to 124 | fully sequenced, | 640/763 (83 %) | 10 diff (98.7 %id) | ||
TI_1948123705 | .a | 310 to 879 | 134 to 705 | fully sequenced, | 572/705 (81 %) | 6 diff (99.2 %id) | ||
TI_1948123706 | .a | 849 to 1416 | 689 to 119 | fully sequenced, | 571/689 (82 %) | 5 diff (99.3 %id) | ||
TI_1948123866 | .a | 310 to 882 | 135 to 719 | fully sequenced, | 585/719 (81 %) | 6 diff (99.2 %id) | ||
TI_1948123867 | .a | 852 to 1416 | 698 to 124 | fully sequenced, | 575/698 (82 %) | 7 diff (99.0 %id) | ||
BP340425 | Spleen | .b | 1 to 580 | 2 to 581 | 581/581 (100 %) | 0 diff (100 %id) | ||
DA940046 | Spleen | .d-u | 1 to 567 | 2 to 568 | exact | tiling clone, capped | 567/567 (100 %) | 0 diff (100 %id) |
DA980255 | synovial membrane tissue from rheumatioidarthritis | .b | 1 to 553 | 2 to 554 | capped | 553/553 (100 %) | 0 diff (100 %id) | |
DR006724 | Spleen | .b | 24 to 616 | 27 to 619 | 593/619 (95 %) | 0 diff (100 %id) | ||
X95876 | blood | .b | 1 to 1616 | 8 to 1623 | exact | tiling clone, AAA | 1623/1623 (100 %) | 0 diff (100 %id) |
DA940046 | Spleen | .d-u | 1 to 567 | 2 to 568 | exact | tiling clone, capped | 567/567 (100 %) | 0 diff (100 %id) |
DA980255 | synovial membrane tissue from rheumatioidarthritis | .b | 1 to 553 | 2 to 554 | capped | 553/553 (100 %) | 0 diff (100 %id) | |
DR006724 | TC119210 | CXCR3.bAug10 | 616 | 619 | TC119210 | 593 | 0 | |
X95876 | X95876 | CXCR3.bAug10 | 1616 | 1623 | X95876 | 1623 | 0 |
? | Gene Summary | Gene on genome | mRNA:.a, .b, .c, .d-u | Alternative mRNAs features, proteins, introns, exons, sequences | Expression Tissue | Function, regulation, related genes DCI |