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Gene CXCL9TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
239 supporting clones for gene CXCL9 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CD109260 Pooled-Skin .a 1 to 566 9 to 585 exact     585/750
(78 %)
23 diff
(97.0 %id)
CB959303 Pooled-Glandular .a 1 to 657 7 to 672 exact     672/805
(83 %)
14 diff
(98.3 %id)
DA958774 Spleen .a 1 to 548 7 to 554 G29D capped   553/553
(100 %)
3 diff
(99.5 %id)
DA961996 Spleen .a 1 to 552 7 to 558 exact capped   557/557
(100 %)
2 diff
(99.7 %id)
DA973664 synovial membrane tissue from rheumatioidarthritis .a 1 to 569 7 to 575 exact capped   574/574
(100 %)
2 diff
(99.7 %id)
DB201084 trachea .a 1 to 576 7 to 582 exact capped   581/581
(100 %)
3 diff
(99.5 %id)
DA447390 tongue, tumor tissue .a 1 to 584 6 to 589 exact capped   588/588
(100 %)
1 diff
(99.9 %id)
DA593380 lung .a 1 to 564 6 to 569 exact capped   568/568
(100 %)
1 diff
(99.9 %id)
DA935734 Spleen .a 1 to 459 16 to 476 L85P I86D K87* capped   465/479
(97 %)
16 diff
(96.7 %id)
DA935905 Spleen .a 1 to 582 6 to 587 exact capped   586/586
(100 %)
3 diff
(99.5 %id)
DA941190 Spleen .a 1 to 595 6 to 600 exact capped   599/599
(100 %)
2 diff
(99.7 %id)
DB102434 thymus .a 1 to 553 6 to 558 exact capped   557/557
(100 %)
2 diff
(99.7 %id)
DB183335 liver, tumor tissue .a 1 to 568 6 to 573 exact capped   572/572
(100 %)
2 diff
(99.7 %id)
DB186500 liver, tumor tissue .a 1 to 564 6 to 569 exact capped   568/568
(100 %)
1 diff
(99.9 %id)
DB209417 trachea .a 1 to 462 6 to 466 exact capped   465/465
(100 %)
2 diff
(99.6 %id)
AK311852 thalamus .a 1 to 435 4 to 438 R27G     438/438
(100 %)
1 diff
(99.8 %id)
BC095396 Placenta, pre-eclamptic .a 1 to 2563 4 to 2566 exact tiling clone, AAA   2566/2566
(100 %)
2 diff
(100.0 %id)
DA375645 thalamus .a 1 to 564 5 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA426477 colon .a 1 to 583 5 to 585 exact capped   584/587
(99 %)
5 diff
(99.2 %id)
DA536321 heart .a 1 to 605 5 to 609 exact capped   608/608
(100 %)
0 diff
(100 %id)
CB997468 placenta, pre-eclamptic placenta .a 1 to 783 32 to 820 exact     792/824
(96 %)
23 diff
(97.3 %id)
CB997467 placenta, pre-eclamptic placenta .a 1 to 782 32 to 820 exact     792/824
(96 %)
34 diff
(95.9 %id)
CB995904 placenta, pre-eclamptic placenta .a 1 to 704 31 to 737 exact     710/827
(85 %)
15 diff
(98.2 %id)
CB995439 placenta, pre-eclamptic placenta .a 1 to 778 31 to 812 exact     785/814
(96 %)
15 diff
(98.2 %id)
CD110190 placenta, pre-eclamptic placenta .a 1 to 603 32 to 641 exact     613/750
(81 %)
15 diff
(98.0 %id)
CB961731 placenta, pre-eclamptic placenta .a 1 to 785 31 to 822 exact     795/823
(96 %)
22 diff
(97.4 %id)
CB961971 placenta, pre-eclamptic placenta .a 1 to 715 32 to 751 exact     723/754
(95 %)
13 diff
(98.3 %id)
CB958000 Pooled-Glandular .a 1 to 490 11 to 489 K103E H105T Q106S K109E V110S ...     482/557
(86 %)
17 diff
(97.0 %id)
DA924422 small intestine .a 1 to 582 5 to 587 C31L S32F C33L I34H S35Q ... capped   586/586
(100 %)
1 diff
(99.9 %id)
DA945132 Spleen .a 1 to 552 5 to 556 exact capped   555/555
(100 %)
0 diff
(100 %id)
DA953257 Spleen .a 1 to 558 5 to 563 L67P K68E N69E G70W V71S ... capped   562/562
(100 %)
2 diff
(99.7 %id)
DA957756 Spleen .a 1 to 474 5 to 478 exact capped   477/477
(100 %)
0 diff
(100 %id)
DA960253 Spleen .a 1 to 559 5 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DA974043 synovial membrane tissue from rheumatioidarthritis .a 1 to 567 5 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA979124 synovial membrane tissue from rheumatioidarthritis .a 1 to 549 5 to 553 exact capped   552/552
(100 %)
0 diff
(100 %id)
DA985861 synovial membrane tissue from rheumatioidarthritis .a 1 to 564 5 to 568 exact capped   567/567
(100 %)
1 diff
(99.9 %id)
DA992883 synovial membrane tissue from rheumatioidarthritis .a 1 to 558 14 to 573 S57P V82A S116I Q117S R118T ... capped   563/572
(98 %)
10 diff
(98.3 %id)
DB008177 cervix, tumor tissue .a 1 to 568 5 to 572 K104E capped   571/571
(100 %)
1 diff
(99.9 %id)
DB103405 thymus .a 1 to 561 5 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DB106351 thymus .a 1 to 570 5 to 575 L67P K68E N69E G70W V71S ... capped   574/574
(100 %)
1 diff
(99.9 %id)
DB110887 thymus .a 1 to 549 5 to 553 A65V capped   552/552
(100 %)
1 diff
(99.9 %id)
DB119626 thymus .a 1 to 544 5 to 548 exact capped   547/547
(100 %)
0 diff
(100 %id)
DB183013 liver, tumor tissue .a 1 to 546 5 to 550 exact capped   549/549
(100 %)
0 diff
(100 %id)
DB200368 trachea .a 1 to 584 5 to 588 exact capped   587/587
(100 %)
1 diff
(99.9 %id)
DA173000 amygdala .a 1 to 563 4 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DA373647 thalamus .a 1 to 558 4 to 561 R27G capped   560/561
(99 %)
2 diff
(99.7 %id)
DA373718 thalamus .a 1 to 545 4 to 548 exact capped   547/547
(100 %)
0 diff
(100 %id)
DA378829 thalamus .a 1 to 636 4 to 639 exact capped   638/638
(100 %)
1 diff
(99.9 %id)
DA380070 thalamus .a 1 to 546 4 to 549 exact capped   548/548
(100 %)
0 diff
(100 %id)
DA427254 colon .a 1 to 552 4 to 555 exact capped   554/554
(100 %)
0 diff
(100 %id)
DA429279 colon .a 1 to 577 4 to 580 exact capped   579/580
(99 %)
2 diff
(99.7 %id)
DA468937   .a 1 to 588 4 to 591 exact capped   590/590
(100 %)
1 diff
(99.9 %id)
DA766641 tongue .a 1 to 564 4 to 567 exact capped   566/566
(100 %)
0 diff
(100 %id)
AU139136 placenta .a 1 to 661 4 to 670 exact capped   669/720
(92 %)
12 diff
(98.4 %id)
DA924353 small intestine .a 1 to 567 4 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA942575 Spleen .a 1 to 560 4 to 564 C31L S32F C33L I34H S35Q ... capped   563/563
(100 %)
2 diff
(99.7 %id)
DA944172 Spleen .a 1 to 572 4 to 575 V25A capped   574/574
(100 %)
1 diff
(99.9 %id)
DA952242 Spleen .a 1 to 555 4 to 559 K109E V110S L111S K112E V113S ... capped   558/558
(100 %)
1 diff
(99.9 %id)
DA961002 Spleen .a 1 to 553 4 to 556 I13T capped   555/555
(100 %)
1 diff
(99.9 %id)
DA970478 synovial membrane tissue from rheumatioidarthritis .a 1 to 763 4 to 762 exact capped   761/763
(99 %)
7 diff
(99.1 %id)
DA970553 synovial membrane tissue from rheumatioidarthritis .a 1 to 769 4 to 769 exact capped   768/773
(99 %)
7 diff
(99.1 %id)
DA984325 synovial membrane tissue from rheumatioidarthritis .a 1 to 562 4 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DA988092 synovial membrane tissue from rheumatioidarthritis .a 1 to 561 4 to 564 exact capped   563/563
(100 %)
1 diff
(99.9 %id)
DA999690 breast, tumor tissue .a 1 to 563 4 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DB102034 thymus .a 1 to 558 4 to 561 exact capped   560/560
(100 %)
2 diff
(99.7 %id)
DB102531 thymus .a 1 to 552 4 to 555 Q99* capped   554/554
(100 %)
3 diff
(99.5 %id)
DB103903 thymus .a 1 to 551 4 to 554 exact capped   553/553
(100 %)
0 diff
(100 %id)
DB108572 thymus .a 1 to 567 4 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DB123298 thymus .a 1 to 542 4 to 545 exact capped   544/544
(100 %)
0 diff
(100 %id)
DB123352 thymus .a 1 to 536 4 to 539 exact capped   538/538
(100 %)
1 diff
(99.9 %id)
DB126881 thymus .a 1 to 537 4 to 540 exact capped   539/539
(100 %)
0 diff
(100 %id)
DB128075 thymus .a 1 to 546 4 to 549 exact capped   548/548
(100 %)
1 diff
(99.9 %id)
DB141261 thymus .a 1 to 549 4 to 552 exact capped   551/551
(100 %)
0 diff
(100 %id)
DB182996 liver, tumor tissue .a 1 to 554 4 to 557 exact capped   556/556
(100 %)
0 diff
(100 %id)
DB202076 trachea .a 1 to 567 4 to 570 exact capped   569/569
(100 %)
1 diff
(99.9 %id)
DB204114 trachea .a 1 to 557 4 to 560 exact capped   559/559
(100 %)
0 diff
(100 %id)
DB206918 trachea .a 1 to 545 4 to 548 exact capped   547/547
(100 %)
0 diff
(100 %id)
DB243962 stomach, tumor tissue .a 1 to 565 4 to 567 exact capped   566/566
(100 %)
1 diff
(99.9 %id)
DA945203 Spleen .a 1 to 562 3 to 564 exact capped   563/563
(100 %)
2 diff
(99.7 %id)
DA971605 synovial membrane tissue from rheumatioidarthritis .a 1 to 569 3 to 571 exact capped   570/573
(99 %)
1 diff
(99.9 %id)
DB122127 thymus .a 1 to 555 3 to 557 K109X capped   556/556
(100 %)
0 diff
(100 %id)
DA938979 Spleen .a 1 to 563 10 to 574 exact capped   565/565
(100 %)
2 diff
(99.7 %id)
DB112226 thymus .a 1 to 586 2 to 587 exact capped   586/586
(100 %)
0 diff
(100 %id)
DB126815 thymus .a 1 to 561 9 to 569 exact capped   561/561
(100 %)
0 diff
(100 %id)
DB208396 trachea .a 1 to 462 8 to 469 exact capped   462/462
(100 %)
1 diff
(99.8 %id)
TI_57167509   .a 4 to 691 45 to 738 K28*     694/894
(77 %)
35 diff
(96.1 %id)
BC063122 Skin and meninges pool- skin, dura matter,pia matter, choroid plexus. .a 5 to 2563 13 to 2571 exact available from MGC, AAA   2559/2559
(100 %)
3 diff
(99.9 %id)
BC025745 Pancreas, Spleen, adult pooled .a 9 to 2563 1 to 2555 K28* available from MGC, AAA   2555/2555
(100 %)
5 diff
(99.9 %id)
BI835284 pooled pancreas and spleen .a 9 to 691 1 to 689 K28* available from MGC,   689/889
(77 %)
31 diff
(96.6 %id)
NM_002416.1   .a 19 to 2563 1 to 2545 exact RefSeq,   2545/2545
(100 %)
0 diff
(100 %id)
DN995342 breast cancer, Mammary gland (cancer tissue) .a 19 to 615 10 to 605 S4V G5V V6F L7F F8S ...     596/605
(98 %)
6 diff
(99.1 %id)
X72755 leukaemia .a 19 to 2563 1 to 2545 exact     2545/2545
(100 %)
0 diff
(100 %id)
AW205411   .a 29 to 369 341 to 1       341/342
(99 %)
5 diff
(98.6 %id)
BC042178 Pancreas, Spleen, adult pooled .a 36 to 2689 1 to 2654 exact tiling clone, available from MGC, AAA   2654/2654
(100 %)
1 diff
(100.0 %id)
BI835035 pooled pancreas and spleen .a 36 to 729 1 to 692 exact available from MGC,   692/692
(100 %)
3 diff
(99.6 %id)
TI_57167417   .a 36 to 729 29 to 720 exact     692/720
(96 %)
9 diff
(98.8 %id)
AI918026 Prostate .a 47 to 356 311 to 2       310/311
(99 %)
0 diff
(100 %id)
EL735894 mixed .a 58 to 440 1 to 383 exact     383/546
(70 %)
5 diff
(99.1 %id)
TI_1948223441   .a 58 to 440 134 to 516 exact     383/744
(51 %)
11 diff
(98.6 %id)
TI_1948223951   .a 58 to 440 128 to 510 exact     383/776
(49 %)
11 diff
(98.6 %id)
TI_1948223952   .a 58 to 434 118 to 494       377/1427
(26 %)
13 diff
(99.1 %id)
TI_1948224236   .a 63 to 440 130 to 505       376/883
(42 %)
12 diff
(98.7 %id)
AI183507 heart .a 67 to 623 554 to 1       554/554
(100 %)
6 diff
(99.0 %id)
DB141449 thymus .a 122 to 529 140 to 548 C31L S32F C33L I34H S35Q ... capped   547/547
(100 %)
1 diff
(99.9 %id)
AW378416 head_neck .a 156 to 529 403 to 31       373/403
(92 %)
1 diff
(99.8 %id)
BE842356 stomach .a 174 to 681 1 to 504       504/504
(100 %)
11 diff
(97.9 %id)
AW810378 stomach .a 180 to 796 1 to 618       618/618
(100 %)
30 diff
(95.2 %id)
AW810602 stomach .a 215 to 750 542 to 2       541/542
(99 %)
9 diff
(98.4 %id)
AW178811 head_neck .a 283 to 693 1 to 414       414/417
(99 %)
18 diff
(95.7 %id)
DA068683 cerebellum .a 293 to 857 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DB120622 thymus .a 293 to 858 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
FN166285 breast carcinoma .a 450 to 529 11 to 90       80/90
(88 %)
6 diff
(93.4 %id)
CD694443 normal nasopharynx .a 457 to 1021 16 to 580       565/580
(97 %)
6 diff
(99.0 %id)
DA977846 synovial membrane tissue from rheumatioidarthritis .a 484 to 1041 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB124887 thymus .a 484 to 1032 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BP227494   .a 543 to 1128 1 to 582       582/583
(99 %)
25 diff
(95.8 %id)
DA585996 lung .a 559 to 1097 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
FN142604 breast carcinoma .a 582 to 694 1 to 116       116/120
(96 %)
3 diff
(97.5 %id)
AW392935 stomach .a 585 to 1209 631 to 8       624/631
(98 %)
0 diff
(100 %id)
BQ363298 stomach .a 605 to 1233 631 to 1       631/631
(100 %)
42 diff
(93.4 %id)
BM855361 stomach .a 606 to 920 1 to 314       314/314
(100 %)
2 diff
(99.4 %id)
AW392933 stomach .a 612 to 1217 607 to 3       605/609
(99 %)
0 diff
(100 %id)
BE842335 stomach .a 632 to 1235 604 to 2       603/604
(99 %)
0 diff
(100 %id)
BE842417 stomach .a 641 to 1221 579 to 1       579/581
(99 %)
15 diff
(97.5 %id)
BE842392 stomach .a 648 to 1244 598 to 2       597/598
(99 %)
0 diff
(100 %id)
BE842520 stomach .a 649 to 1218 569 to 3       567/569
(99 %)
0 diff
(100 %id)
AW810409 stomach .a 654 to 1248 596 to 1       596/605
(98 %)
10 diff
(98.4 %id)
AW388201 stomach .a 672 to 1264 604 to 10       595/604
(98 %)
0 diff
(100 %id)
BE842430 stomach .a 674 to 1182 515 to 5       511/515
(99 %)
0 diff
(100 %id)
AW609177 stomach .a 685 to 1225 567 to 7       561/568
(98 %)
0 diff
(100 %id)
AW810374 stomach .a 685 to 1233 557 to 1       557/557
(100 %)
34 diff
(93.9 %id)
AA360924   .a 874 to 1184 1 to 312       312/316
(98 %)
2 diff
(99.4 %id)
BQ083492 stomach .a 910 to 1051 1 to 142       142/142
(100 %)
2 diff
(98.6 %id)
T93556 lung .a 981 to 1141 1 to 163       163/165
(98 %)
9 diff
(94.6 %id)
BQ311326 breast_normal .a 1020 to 1235 20 to 239       220/248
(88 %)
6 diff
(97.6 %id)
AW388007 stomach .a 1142 to 1252 131 to 22       110/131
(83 %)
0 diff
(100 %id)
BI005155 head_normal .a 1210 to 1468 260 to 2       259/260
(99 %)
0 diff
(100 %id)
AA361274   .a 1213 to 1523 1 to 311       311/311
(100 %)
1 diff
(99.7 %id)
AA361362   .a 1213 to 1590 1 to 378       378/378
(100 %)
3 diff
(99.3 %id)
AW965936   .a 1214 to 1810 1 to 599       599/599
(100 %)
11 diff
(98.2 %id)
T83507 liver and spleen .a 1316 to 1621 1 to 318   fully sequenced,   318/318
(100 %)
17 diff
(94.7 %id)
T89526 liver and spleen .a 1317 to 1688 1 to 382   fully sequenced,   382/382
(100 %)
6 diff
(98.5 %id)
AW383924 head_neck .a 1326 to 1825 505 to 5       501/513
(97 %)
0 diff
(100 %id)
BQ348707 head_neck .a 1326 to 1830 532 to 28       505/540
(93 %)
0 diff
(100 %id)
FN069819 breast carcinoma .a 1349 to 1416 68 to 1     Submitted on the opposite strand 68/69
(98 %)
0 diff
(100 %id)
BE148670 head_neck .a 1367 to 1825 16 to 473       458/669
(68 %)
2 diff
(99.8 %id)
BF833661 head_neck .a 1409 to 1622 1 to 212       212/217
(97 %)
7 diff
(96.8 %id)
BG682659 skin, squamous cell carcinoma .a 1409 to 2260 13 to 855       843/880
(95 %)
38 diff
(95.7 %id)
BF840782 head_neck .a 1455 to 1819 1 to 363       363/363
(100 %)
7 diff
(98.1 %id)
FN156131 breast carcinoma .a 1468 to 1572 107 to 1     Submitted on the opposite strand 107/107
(100 %)
2 diff
(98.2 %id)
BE933092 head_neck .a 1480 to 1582 1 to 104       104/104
(100 %)
2 diff
(98.1 %id)
AI076135 liver and spleen .a 1486 to 1906 429 to 10       420/429
(97 %)
0 diff
(100 %id)
AI692742 carcinoid, lung .a 1497 to 1925 1 to 429     Submitted on the opposite strand 429/429
(100 %)
0 diff
(100 %id)
AW965906   .a 1504 to 2075 1 to 574       574/574
(100 %)
20 diff
(96.6 %id)
T29117 blood, white blood cells .a 1504 to 1758 1 to 255       255/255
(100 %)
0 diff
(100 %id)
BE775047 uterus .a 1507 to 1617 119 to 9       111/129
(86 %)
0 diff
(100 %id)
FN054435 breast carcinoma .a 1568 to 1667 100 to 1     Submitted on the opposite strand 100/100
(100 %)
0 diff
(100 %id)
T83361 liver and spleen .a 1591 to 1900 320 to 1   fully sequenced,   320/320
(100 %)
15 diff
(95.4 %id)
FN106822 breast carcinoma .a 1606 to 1669 64 to 1     Submitted on the opposite strand 64/64
(100 %)
0 diff
(100 %id)
T89439 liver and spleen .a 1658 to 1900 249 to 1   fully sequenced,   249/249
(100 %)
0 diff
(100 %id)
CD701481 normal nasopharynx .a 1696 to 2292 31 to 628       598/628
(95 %)
14 diff
(97.8 %id)
AA115294 uterus .a 1726 to 2169 1 to 443   fully sequenced,   443/443
(100 %)
3 diff
(99.4 %id)
CR736972 liver and spleen .a 1751 to 2076 1 to 325       325/325
(100 %)
6 diff
(98.2 %id)
R00452 liver and spleen .a 1752 to 2051 1 to 306       306/378
(80 %)
20 diff
(94.8 %id)
FN144710 breast carcinoma .a 1838 to 1959 1 to 122       122/124
(98 %)
3 diff
(97.6 %id)
CB052871 leiomyosarcoma, soft tissue .a 1848 to 2140 3 to 295   fully sequenced,   293/295
(99 %)
5 diff
(98.4 %id)
FN155204 breast carcinoma .a 1851 to 1926 1 to 77       77/79
(97 %)
5 diff
(93.7 %id)
AA037522 uterus .a 1855 to 2211 1 to 362   AAA   362/467
(77 %)
10 diff
(97.9 %id)
AA131506 uterus .a 1855 to 2378 1 to 524   fully sequenced,   524/524
(100 %)
0 diff
(100 %id)
BQ016361 lung, Metastatic Chondrosarcoma .a 1888 to 2563 692 to 17   AAA   676/676
(100 %)
0 diff
(100 %id)
FN049404 breast carcinoma .a 1894 to 1977 84 to 1     Submitted on the opposite strand 84/85
(98 %)
0 diff
(100 %id)
AW796744 uterus .a 1903 to 2078 1 to 176       176/176
(100 %)
3 diff
(98.3 %id)
AW796747 uterus .a 1936 to 2078 1 to 143       143/143
(100 %)
2 diff
(98.7 %id)
CA748729 Alveolar Macrophage, lung .a 1951 to 2563 628 to 16   AAA   613/622
(98 %)
2 diff
(99.7 %id)
DB334709 synovial membrane tissue from rheumatioidarthritis .a 2040 to 2563 516 to 1       516/541
(95 %)
17 diff
(96.9 %id)
AW269682 lung, two pooled squamous cell carcinomas .a 2042 to 2563 522 to 1       522/522
(100 %)
1 diff
(99.9 %id)
DB334637 synovial membrane tissue from rheumatioidarthritis .a 2042 to 2563 522 to 1       522/528
(98 %)
24 diff
(95.5 %id)
CB050732 Prostate .a 2045 to 2563 558 to 40   AAA   519/528
(98 %)
0 diff
(100 %id)
AW190524 adenocarcinoma, Pancreas .a 2046 to 2566 521 to 1       521/521
(100 %)
7 diff
(98.7 %id)
AI924853 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 2052 to 2562 511 to 1       511/511
(100 %)
0 diff
(100 %id)
BF379536 uterus_tumor .a 2053 to 2378 1 to 323       323/326
(99 %)
6 diff
(98.2 %id)
BF085841 placenta_normal .a 2054 to 2265 1 to 212       212/212
(100 %)
4 diff
(98.2 %id)
BF085846 placenta_normal .a 2054 to 2378 1 to 325       325/348
(93 %)
4 diff
(98.9 %id)
BF085896 placenta_normal .a 2054 to 2265 1 to 212       212/212
(100 %)
4 diff
(98.2 %id)
BF085901 placenta_normal .a 2054 to 2378 1 to 325       325/348
(93 %)
4 diff
(98.9 %id)
BF085725 placenta_normal .a 2056 to 2370 329 to 15       315/343
(91 %)
0 diff
(100 %id)
BF085845 placenta_normal .a 2056 to 2378 326 to 4       323/332
(97 %)
0 diff
(100 %id)
BF085900 placenta_normal .a 2056 to 2378 326 to 4       323/332
(97 %)
0 diff
(100 %id)
BF379543 uterus_tumor .a 2056 to 2265 10 to 219       210/219
(95 %)
6 diff
(97.3 %id)
BQ365584 placenta_normal .a 2056 to 2236 181 to 1       181/201
(90 %)
8 diff
(96.1 %id)
BF379530 uterus_tumor .a 2062 to 2371 309 to 2       308/309
(99 %)
0 diff
(100 %id)
FN167010 breast carcinoma .a 2064 to 2141 1 to 78       78/78
(100 %)
3 diff
(96.2 %id)
AI889489 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 2080 to 2568 506 to 18   AAA   489/489
(100 %)
3 diff
(99.4 %id)
AI741888 pooled .a 2090 to 2563 472 to 1       472/472
(100 %)
7 diff
(98.6 %id)
AI831086 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 2094 to 2567 476 to 3       474/476
(99 %)
0 diff
(100 %id)
BF055527 pooled .a 2094 to 2564 471 to 1       471/471
(100 %)
2 diff
(99.6 %id)
T72007 lung .a 2098 to 2542 1 to 451   fully sequenced,   451/451
(100 %)
13 diff
(97.2 %id)
BF438664 brain, glioblastoma (pooled) .a 2106 to 2563 458 to 1       458/458
(100 %)
3 diff
(99.4 %id)
AW514874 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 2108 to 2562 455 to 1       455/455
(100 %)
1 diff
(99.8 %id)
CB052870 leiomyosarcoma, soft tissue .a 2110 to 2563 477 to 24   fully sequenced, AAA   454/454
(100 %)
3 diff
(99.4 %id)
AI686870 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 2113 to 2564 452 to 1       452/452
(100 %)
0 diff
(100 %id)
AW515011 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 2116 to 2566 451 to 1   tiling clone,   451/451
(100 %)
1 diff
(99.8 %id)
AI423887 brain, glioblastoma (pooled) .a 2120 to 2563 444 to 1       444/444
(100 %)
2 diff
(99.6 %id)
AI285475 lymph node, mantle cell lymphoma .a 2121 to 2563 443 to 1       443/443
(100 %)
1 diff
(99.8 %id)
AI281492 lymph node, mantle cell lymphoma .a 2121 to 2563 443 to 1       443/444
(99 %)
0 diff
(100 %id)
AI433482 lymph node, lymphoma, follicular mixed small and largecell .a 2121 to 2564 444 to 1       444/444
(100 %)
3 diff
(99.4 %id)
AI819546 lymph node, lymphoma, follicular mixed small and largecell .a 2121 to 2565 446 to 1       446/446
(100 %)
3 diff
(99.4 %id)
AA962800 2 pooled tumors (clear cell type), Kidney .a 2135 to 2562 430 to 3       428/430
(99 %)
0 diff
(100 %id)
AA115269 uterus .a 2139 to 2563 420 to 1   fully sequenced,   420/420
(100 %)
1 diff
(99.8 %id)
AI421973 brain, glioblastoma (pooled) .a 2143 to 2568 426 to 1       426/426
(100 %)
2 diff
(99.6 %id)
AI306660 2 pooled tumors (clear cell type), Kidney .a 2145 to 2568 424 to 1       424/424
(100 %)
2 diff
(99.6 %id)
AA948337 2 pooled tumors (clear cell type), Kidney .a 2146 to 2566 421 to 1       421/423
(99 %)
0 diff
(100 %id)
AI311579 2 pooled tumors (clear cell type), Kidney .a 2152 to 2566 415 to 1       415/415
(100 %)
1 diff
(99.8 %id)
AA632123 breast .a 2156 to 2562 407 to 1       407/407
(100 %)
2 diff
(99.6 %id)
AI865101 lymph node, lymphoma, follicular mixed small and largecell .a 2159 to 2565 407 to 1       407/407
(100 %)
3 diff
(99.3 %id)
DB379318 placenta .a 2174 to 2692 515 to 1       515/515
(100 %)
13 diff
(97.5 %id)
BF379545 uterus_tumor .a 2179 to 2383 206 to 3       204/206
(99 %)
0 diff
(100 %id)
AI032069 liver and spleen .a 2184 to 2565 382 to 1       382/382
(100 %)
2 diff
(99.5 %id)
AA970872 colon, colon tumor .a 2193 to 2562 370 to 1       370/370
(100 %)
0 diff
(100 %id)
FN148453 breast carcinoma .a 2212 to 2275 62 to 1     Submitted on the opposite strand 62/62
(100 %)
2 diff
(96.8 %id)
AA865905 pooled germ cell tumors .a 2213 to 2567 357 to 3       355/357
(99 %)
0 diff
(100 %id)
AI865380 lymph node, lymphoma, follicular mixed small and largecell .a 2214 to 2563 373 to 21   AAA   353/353
(100 %)
6 diff
(98.4 %id)
CB956142 Pooled-Glandular .a 2224 to 2568 1 to 350       350/354
(98 %)
15 diff
(95.8 %id)
AI567906 adenocarcinoma, Pancreas .a 2236 to 2690 455 to 1       455/455
(100 %)
1 diff
(99.8 %id)
AA974879 2 pooled tumors (clear cell type), Kidney .a 2238 to 2566 329 to 1       329/329
(100 %)
0 diff
(100 %id)
FN084503 breast carcinoma .a 2244 to 2354 1 to 114       114/114
(100 %)
3 diff
(97.4 %id)
BF594047 brain, glioblastoma (pooled) .a 2277 to 2563 288 to 1       288/288
(100 %)
2 diff
(99.4 %id)
T93532 lung .a 2284 to 2568 285 to 1       285/285
(100 %)
4 diff
(98.6 %id)
FN060229 breast carcinoma .a 2307 to 2366 1 to 63       63/64
(98 %)
3 diff
(95.4 %id)
FN075895 breast carcinoma .a 2330 to 2392 63 to 1     Submitted on the opposite strand 63/64
(98 %)
0 diff
(100 %id)
FN096906 breast carcinoma .a 2340 to 2434 1 to 95       95/95
(100 %)
0 diff
(100 %id)
AI424490 brain, glioblastoma (pooled) .a 2347 to 2563 217 to 1       217/217
(100 %)
1 diff
(99.6 %id)
AA131406 uterus .a 2348 to 2563 220 to 1   fully sequenced,   220/220
(100 %)
0 diff
(100 %id)
FN144527 breast carcinoma .a 2359 to 2451 1 to 91       91/91
(100 %)
2 diff
(97.9 %id)
T87846 lung .a 2361 to 2572 218 to 1   fully sequenced,   218/218
(100 %)
4 diff
(98.2 %id)
FN175653 breast carcinoma .a 2394 to 2486 1 to 90       90/90
(100 %)
3 diff
(96.7 %id)
AI370217 follicular lymphoma, lymph node .a 2409 to 2563 155 to 1       155/155
(100 %)
0 diff
(100 %id)
FN059626 breast carcinoma .a 2416 to 2512 1 to 97       97/99
(97 %)
1 diff
(99.0 %id)
AI784420 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 2426 to 2563 138 to 1       138/138
(100 %)
0 diff
(100 %id)
AI886740 lymph node, lymphoma, follicular mixed small and largecell .a 2443 to 2561 118 to 1       334/375
(89 %)
31 diff
(91.8 %id)
FN168366 breast carcinoma .a 2457 to 2561 1 to 106       106/107
(99 %)
3 diff
(97.2 %id)
BG721454 testis .b 1 to 738 1 to 740 K70T K79T K80E Q82A K83Q ... tiling clone,   740/740
(100 %)
13 diff
(98.3 %id)
FN163258 breast carcinoma .b 341 to 424 1 to 83       83/85
(97 %)
4 diff
(95.3 %id)
AW809983 stomach .b 373 to 609 242 to 6   tiling clone,   237/242
(97 %)
0 diff
(100 %id)
FN057598 breast carcinoma .b 602 to 653 1 to 52   tiling clone,   52/52
(100 %)
0 diff
(100 %id)
AW378357 head_neck Gene CXCL9, variant not shown         This clone was ignored    
AW389739 stomach Gene CXCL9, variant not shown         This clone was ignored    
AW389754 stomach Gene CXCL9, variant not shown         This clone was ignored    
AI735150 colon Gene CXCL9, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI