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Gene CTNNA1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
590 representative clones for gene CTNNA1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001903.2   .a 1 to 3757 4 to 3760 exact RefSeq, AAA   3760/3760
(100 %)
0 diff
(100 %id)
BJ993238 hepatoblastoma .a 1 to 443 3 to 445   tiling clone,   445/445
(100 %)
2 diff
(99.6 %id)
DC345376 tongue, tumor tissue .a 2 to 725 1 to 724       724/725
(99 %)
1 diff
(99.9 %id)
D14705   .a 2 to 3434 1 to 3433 Q342K Q789H     3433/3433
(100 %)
9 diff
(99.8 %id)
DC321901 brain .a 9 to 662 1 to 654       654/654
(100 %)
0 diff
(100 %id)
DC343365 thalamus .a 13 to 672 1 to 660       660/660
(100 %)
0 diff
(100 %id)
BX365391 Placenta Cot 25-normalized .a 16 to 921 1 to 906       906/906
(100 %)
0 diff
(100 %id)
BM828426 stomach .a 16 to 708 1 to 693       693/693
(100 %)
0 diff
(100 %id)
BU195255 melanotic melanoma, skin .a 17 to 910 1 to 893       893/895
(99 %)
3 diff
(99.7 %id)
CV808272 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 18 to 740 1 to 724       724/724
(100 %)
3 diff
(99.6 %id)
BU838506 dorsal root ganglia .a 26 to 954 1 to 934       934/960
(97 %)
17 diff
(98.3 %id)
D13866 colon tumor .a 27 to 3453 1 to 3429 exact     3429/3429
(100 %)
2 diff
(100.0 %id)
BQ932258 leiomyosarcoma, uterus .a 27 to 857 1 to 833       833/834
(99 %)
9 diff
(99.0 %id)
BC000385 Lung, small cell carcinoma .a 28 to 3435 1 to 3408 exact tiling clone, available from MGC, AAA   3408/3408
(100 %)
0 diff
(100 %id)
DA408849 thalamus .a 28 to 697 2 to 671   capped   670/670
(100 %)
0 diff
(100 %id)
DR156230 human embryonic stem cells differentiated toan early endodermal cell type .a 28 to 865 1 to 838       838/838
(100 %)
0 diff
(100 %id)
DA433804 tongue, tumor tissue .a 29 to 730 2 to 703   capped   702/702
(100 %)
0 diff
(100 %id)
DA642300 Liver .a 29 to 669 2 to 642   capped   641/641
(100 %)
0 diff
(100 %id)
BM480091 duodenal adenocarcinoma, cell line, small intestine .a 31 to 914 1 to 888       888/1034
(85 %)
14 diff
(98.7 %id)
BU154505 melanotic melanoma, skin .a 32 to 907 1 to 875       875/952
(91 %)
4 diff
(99.6 %id)
CN368701 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 38 to 706 1 to 669       669/669
(100 %)
0 diff
(100 %id)
CN368680 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 41 to 787 1 to 746       746/746
(100 %)
2 diff
(99.8 %id)
BM563519 astrocytoma grade IV, cell line, brain .a 44 to 879 1 to 843       843/1086
(77 %)
10 diff
(99.1 %id)
BM913616 astrocytoma grade IV, cell line, brain .a 44 to 801 1 to 762       762/1098
(69 %)
23 diff
(98.0 %id)
BQ064744 lymph, lymphoma, cell line .a 45 to 920 1 to 887       887/991
(89 %)
26 diff
(97.4 %id)
BQ073548 epidermoid carcinoma, cell line, lung .a 48 to 794 1 to 754       754/955
(78 %)
10 diff
(99.0 %id)
AL548136 placenta, Placenta Cot 25-normalized .a 49 to 1091 1 to 1031       1031/1034
(99 %)
21 diff
(98.0 %id)
DA880741   .a 59 to 789 2 to 732   capped   731/746
(97 %)
2 diff
(99.8 %id)
CX166873 human embryonic stem cells differentiated toan early endodermal cell type .a 63 to 793 1 to 731       731/731
(100 %)
1 diff
(99.9 %id)
BU148437 carcinoma, cell line, Prostate .a 70 to 954 19 to 908       890/923
(96 %)
18 diff
(98.1 %id)
CD653820 Embryonic Stem cells .a 70 to 872 11 to 806       796/826
(96 %)
7 diff
(99.2 %id)
BU849784 ovary, teratocarcinoma, cell line .a 75 to 786 131 to 851       719/1090
(65 %)
24 diff
(97.8 %id)
BQ073661 epidermoid carcinoma, cell line, lung .a 80 to 1002 1 to 931       931/982
(94 %)
15 diff
(98.5 %id)
BQ948360 epidermoid carcinoma, cell line, lung .a 80 to 771 1 to 698       698/877
(79 %)
9 diff
(99.0 %id)
BQ940366 epidermoid carcinoma, cell line, lung .a 80 to 920 1 to 848       848/932
(90 %)
13 diff
(98.7 %id)
BQ925358 epidermoid carcinoma, cell line, lung .a 80 to 954 1 to 878       878/899
(97 %)
10 diff
(98.9 %id)
BQ921630 epidermoid carcinoma, cell line, lung .a 80 to 899 1 to 822       822/888
(92 %)
8 diff
(99.1 %id)
BQ945306 epidermoid carcinoma, cell line, lung .a 80 to 910 1 to 841       841/995
(84 %)
17 diff
(98.3 %id)
BU528625 epidermoid carcinoma, cell line, lung .a 80 to 1013 1 to 937       937/937
(100 %)
10 diff
(99.0 %id)
AA233514 brain, neuroepithelial cells .a 81 to 458 1 to 378       378/378
(100 %)
0 diff
(100 %id)
CD657530 Embryonic Stem cells .a 84 to 880 12 to 808       797/810
(98 %)
5 diff
(99.4 %id)
CN368673 embryonic stem cells, cell lines H1, H7, andH9 .a 85 to 736 1 to 652       652/652
(100 %)
0 diff
(100 %id)
L23805 colon .a 89 to 3555 1 to 3454 A92V I175N K216S L344C Q345R ...     3451/3454
(99 %)
61 diff
(98.3 %id)
CN368672 embryonic stem cells, cell lines H1, H7, andH9 .a 129 to 784 1 to 656       656/656
(100 %)
0 diff
(100 %id)
CR984964 T-Lymphocytes .a 137 to 828 1 to 693       693/693
(100 %)
1 diff
(99.9 %id)
CR981506 T-Lymphocytes .a 137 to 970 1 to 835       835/835
(100 %)
1 diff
(99.9 %id)
BM468519 melanotic melanoma, skin .a 334 to 1155 1 to 822       822/963
(85 %)
4 diff
(99.6 %id)
BQ953794 eye, normal pigmented retinal epithelium .a 386 to 1155 1 to 770       770/908
(84 %)
1 diff
(99.9 %id)
BQ887572 carcinoma, cell line, Prostate .a 402 to 1155 1 to 755       755/917
(82 %)
5 diff
(99.5 %id)
BQ939380 carcinoma, cell line, Prostate .a 402 to 1155 1 to 758       758/959
(79 %)
11 diff
(98.9 %id)
BU541387 carcinoma, cell line, Prostate .a 402 to 1155 1 to 754       754/919
(82 %)
3 diff
(99.7 %id)
BU838528 dorsal root ganglia .a 423 to 1154 1 to 733       733/960
(76 %)
1 diff
(99.9 %id)
DR157637 human embryonic stem cells differentiated toan early endodermal cell type .a 427 to 1223 1 to 797       797/797
(100 %)
1 diff
(99.9 %id)
BQ937636 leiomyosarcoma, uterus .a 472 to 1390 1 to 920       920/921
(99 %)
12 diff
(98.7 %id)
BQ073345 epidermoid carcinoma, cell line, lung .a 563 to 1458 1 to 901       899/983
(91 %)
12 diff
(98.8 %id)
L22080 Prostate .a 567 to 842 1 to 276       276/276
(100 %)
0 diff
(100 %id)
BM912812 amelanotic melanoma, cell line, skin .a 574 to 1389 1 to 814       814/1048
(77 %)
7 diff
(99.4 %id)
BM913411 amelanotic melanoma, cell line, skin .a 574 to 1482 1 to 912       912/1080
(84 %)
11 diff
(99.0 %id)
BM915448 amelanotic melanoma, cell line, skin .a 574 to 1556 1 to 995       995/996
(99 %)
30 diff
(97.0 %id)
CF125134 Chondrosarcoma Lung Metastasis cell lines, lung .a 575 to 1215 1 to 641       641/641
(100 %)
0 diff
(100 %id)
AW250105 lung, small cell carcinoma .a 586 to 1134 1 to 549       549/549
(100 %)
4 diff
(99.3 %id)
CF125433 Chondrosarcoma Lung Metastasis cell lines, lung .a 612 to 1309 1 to 698       698/699
(99 %)
1 diff
(99.9 %id)
CX752001 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 625 to 1374 1 to 745     Submitted on the opposite strand 745/789
(94 %)
6 diff
(99.3 %id)
CB850678 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 640 to 1390 774 to 27   AAA   750/756
(99 %)
7 diff
(99.1 %id)
BU838202 melanotic melanoma, cell line, skin .a 646 to 1389 1 to 745       745/888
(83 %)
7 diff
(99.3 %id)
BU195714 melanotic melanoma, cell line, skin .a 646 to 1397 1 to 759       759/831
(91 %)
15 diff
(98.2 %id)
BQ883550 melanotic melanoma, cell line, skin .a 646 to 1526 1 to 887       887/887
(100 %)
14 diff
(98.5 %id)
BQ883592 melanotic melanoma, cell line, skin .a 646 to 1435 1 to 795       795/937
(84 %)
7 diff
(99.3 %id)
BU167955 melanotic melanoma, cell line, skin .a 646 to 1559 1 to 919       919/919
(100 %)
10 diff
(99.0 %id)
BU174482 melanotic melanoma, cell line, skin .a 646 to 1571 1 to 929       929/932
(99 %)
15 diff
(98.4 %id)
BU174437 melanotic melanoma, cell line, skin .a 646 to 1489 1 to 852       852/942
(90 %)
16 diff
(98.4 %id)
BU196799 melanotic melanoma, cell line, skin .a 646 to 1527 1 to 887       887/910
(97 %)
11 diff
(98.8 %id)
BU180143 melanotic melanoma, cell line, skin .a 646 to 1545 1 to 901       901/904
(99 %)
9 diff
(99.1 %id)
BU191436 melanotic melanoma, cell line, skin .a 646 to 1390 1 to 748       748/954
(78 %)
4 diff
(99.6 %id)
BU838897 melanotic melanoma, cell line, skin .a 646 to 1389 1 to 745       745/960
(77 %)
13 diff
(98.7 %id)
BU838996 melanotic melanoma, cell line, skin .a 646 to 1397 1 to 753       753/944
(79 %)
19 diff
(98.0 %id)
BQ682941 melanotic melanoma, cell line, skin .a 646 to 1489 1 to 853       853/895
(95 %)
18 diff
(98.0 %id)
BQ680753 melanotic melanoma, cell line, skin .a 646 to 1485 1 to 846       846/861
(98 %)
15 diff
(98.3 %id)
BQ680199 melanotic melanoma, cell line, skin .a 646 to 1479 1 to 839       837/929
(90 %)
18 diff
(98.1 %id)
BU839162 melanotic melanoma, cell line, skin .a 646 to 1470 1 to 833       832/882
(94 %)
12 diff
(98.7 %id)
BQ683163 melanotic melanoma, cell line, skin .a 646 to 1489 1 to 847       847/853
(99 %)
15 diff
(98.3 %id)
BQ678937 melanotic melanoma, cell line, skin .a 646 to 1447 1 to 805       805/889
(90 %)
5 diff
(99.5 %id)
BQ680167 melanotic melanoma, cell line, skin .a 646 to 1386 1 to 744       744/872
(85 %)
7 diff
(99.2 %id)
BQ679067 melanotic melanoma, cell line, skin .a 646 to 1545 1 to 896       899/901
(99 %)
26 diff
(97.2 %id)
BQ680088 melanotic melanoma, cell line, skin .a 646 to 1524 1 to 884       884/885
(99 %)
13 diff
(98.6 %id)
BU168608 melanotic melanoma, cell line, skin .a 646 to 1489 1 to 851       851/942
(90 %)
14 diff
(98.6 %id)
CD515590 White Matter .a 771 to 1642 1 to 875       875/876
(99 %)
6 diff
(99.4 %id)
BQ958849 carcinoma, cell line, Prostate .a 808 to 1593 1 to 792       792/974
(81 %)
15 diff
(98.5 %id)
BE383226 brain, neuroblastoma .a 871 to 1539 1 to 666       666/669
(99 %)
3 diff
(99.6 %id)
BQ229713 large cell carcinoma, lung .a 875 to 1755 1 to 897       897/904
(99 %)
19 diff
(97.9 %id)
BU848619 ovary, teratocarcinoma, cell line .a 946 to 1769 1 to 828       828/905
(91 %)
9 diff
(99.1 %id)
BU177764 melanotic melanoma, skin .a 970 to 1853 1 to 890       890/890
(100 %)
12 diff
(98.7 %id)
BQ948213 eye, normal pigmented retinal epithelium .a 973 to 1878 1 to 918       918/935
(98 %)
13 diff
(98.7 %id)
BU856451 ovary, teratocarcinoma, cell line .a 983 to 1846 1 to 870       870/889
(97 %)
14 diff
(98.5 %id)
BI870597 adenocarcinoma, cell line, Liver .a 989 to 1734 1 to 746       746/746
(100 %)
0 diff
(100 %id)
CN368670 embryonic stem cells, cell lines H1, H7, andH9 .a 997 to 1681 1 to 685       685/685
(100 %)
0 diff
(100 %id)
BM560504 astrocytoma grade IV, cell line, brain .a 1110 to 1925 1 to 826       826/1021
(80 %)
15 diff
(98.6 %id)
BQ232424 melanotic melanoma, skin .a 1118 to 1968 1 to 851       851/851
(100 %)
0 diff
(100 %id)
BU194833 melanotic melanoma, skin .a 1126 to 1938 1 to 817       818/856
(95 %)
9 diff
(99.0 %id)
CD655103 Embryonic Stem cells .a 1129 to 1925 12 to 804       793/810
(97 %)
19 diff
(97.7 %id)
CX165597 human embryonic stem cells differentiated toan early endodermal cell type .a 1166 to 1987 1 to 822       822/822
(100 %)
0 diff
(100 %id)
TI_1948080964   .a 1193 to 1973 121 to 902   fully sequenced,   783/903
(86 %)
14 diff
(98.5 %id)
TI_1948081316   .a 1193 to 1978 120 to 908   fully sequenced,   789/908
(86 %)
18 diff
(98.1 %id)
TI_1948081491   .a 1193 to 1919 120 to 852   fully sequenced,   733/852
(86 %)
6 diff
(99.3 %id)
BU538550 adenocarcinoma, cell line, breast .a 1198 to 1992 1 to 798       798/982
(81 %)
4 diff
(99.6 %id)
CV024783 mixed .a 1203 to 1889 1 to 683       684/683
(100 %)
5 diff
(99.3 %id)
BQ878900 dorsal root ganglia .a 1259 to 2046 1 to 790       790/845
(93 %)
6 diff
(99.3 %id)
CD251940 testis .a 1284 to 2150 1 to 868       868/868
(100 %)
3 diff
(99.7 %id)
BM800769 melanotic melanoma, skin .a 1353 to 2379 1 to 1035       1035/1035
(100 %)
18 diff
(98.3 %id)
AU122372 mammary gland .a 1379 to 2061 2 to 688   capped   687/691
(99 %)
12 diff
(98.3 %id)
BQ073279 epidermoid carcinoma, cell line, lung .a 1384 to 2069 1 to 688       688/1106
(62 %)
5 diff
(99.6 %id)
AA132597 colon, tumor .a 1391 to 1778 1 to 389       389/389
(100 %)
3 diff
(99.3 %id)
CB216572 normal endometrium, mid-secretory phase,cycle day 23, uterus .a 1394 to 2029 1 to 636       636/636
(100 %)
0 diff
(100 %id)
DN601732 human embryonic stem cells .a 1433 to 2239 1 to 807       807/807
(100 %)
0 diff
(100 %id)
BQ927021 carcinoma, cell line, Prostate .a 1441 to 2306 1 to 867       867/867
(100 %)
4 diff
(99.6 %id)
BU157214 adenocarcinoma, Pancreas .a 1453 to 2380 1 to 929       929/929
(100 %)
8 diff
(99.2 %id)
BE409008 choriocarcinoma, placenta .a 1456 to 2102 1 to 645       645/657
(98 %)
4 diff
(99.4 %id)
CX753676 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 1477 to 2237 1 to 755     Submitted on the opposite strand 755/771
(97 %)
7 diff
(99.1 %id)
AU124332   .a 1502 to 2390 2 to 895   capped   894/901
(99 %)
11 diff
(98.8 %id)
CN368690 embryonic stem cells, DMSO-treated H9 cellline .a 1550 to 2279 1 to 730       730/732
(99 %)
2 diff
(99.8 %id)
BQ437676 melanotic melanoma, skin .a 1625 to 2390 12 to 783       772/877
(88 %)
7 diff
(99.3 %id)
BQ276325 carcinoma, cell line, Prostate .a 1648 to 2659 1 to 1022       1020/1027
(99 %)
30 diff
(97.1 %id)
BI521044 pooled pancreas and spleen .a 1661 to 2390 1 to 729       729/734
(99 %)
4 diff
(99.5 %id)
CF552679 Pooled muscle (cardiac and skeletal) .a 1680 to 2526 1 to 848       848/852
(99 %)
3 diff
(99.7 %id)
BU554131 ovary, teratocarcinoma, cell line .a 1685 to 2522 1 to 843       843/846
(99 %)
9 diff
(99.0 %id)
BQ420378 epithelioid carcinoma, Pancreas .a 1703 to 2568 1 to 871       871/876
(99 %)
10 diff
(98.9 %id)
BM149343 leukopheresis .a 1789 to 2354 607 to 42       566/607
(93 %)
1 diff
(99.9 %id)
BM801338 duodenal adenocarcinoma, cell line, small intestine .a 1790 to 2693 1 to 911       911/915
(99 %)
11 diff
(98.8 %id)
BM147493 leukopheresis .a 1817 to 2348 533 to 1       531/533
(99 %)
6 diff
(98.9 %id)
BM706222 eye, lens .a 1858 to 2343 1 to 486       486/486
(100 %)
0 diff
(100 %id)
CN368636 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1861 to 2660 1 to 800       800/800
(100 %)
0 diff
(100 %id)
BQ949952 epidermoid carcinoma, cell line, lung .a 1872 to 2728 1 to 858       858/860
(99 %)
9 diff
(99.0 %id)
AU126094   .a 1875 to 2692 2 to 821   capped   818/821
(99 %)
15 diff
(98.2 %id)
TI_1948081492   .a 1889 to 2812 1037 to 123   fully sequenced,   915/1037
(88 %)
18 diff
(98.3 %id)
BE877906 large cell carcinoma, undifferentiated, lung .a 1892 to 2630 1 to 733       733/740
(99 %)
9 diff
(98.8 %id)
TI_1948080965   .a 1943 to 2812 1005 to 121   fully sequenced,   885/1005
(88 %)
33 diff
(96.8 %id)
TI_1948081317   .a 1948 to 2812 995 to 124   fully sequenced,   872/995
(87 %)
18 diff
(98.2 %id)
CD516940 White Matter .a 1950 to 2867 1 to 928   AAA   928/958
(96 %)
23 diff
(97.6 %id)
CX761228 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 1979 to 2741 1 to 763     Submitted on the opposite strand 763/763
(100 %)
0 diff
(100 %id)
BQ675819 epidermoid carcinoma, cell line, salivary gland .a 1998 to 2796 1 to 812       812/895
(90 %)
15 diff
(98.4 %id)
BQ954517 large cell carcinoma, lung .a 1998 to 2858 1 to 869       869/922
(94 %)
10 diff
(99.0 %id)
BI752235 brain .a 2053 to 2790 1 to 738       738/738
(100 %)
2 diff
(99.8 %id)
CX759392 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 2064 to 2768 1 to 705     Submitted on the opposite strand 705/705
(100 %)
0 diff
(100 %id)
BG677156 skin, squamous cell carcinoma .a 2079 to 2918 1 to 845       845/847
(99 %)
14 diff
(98.4 %id)
BM791628 stomach .a 2115 to 2747 1 to 633       633/633
(100 %)
0 diff
(100 %id)
BQ720702 sympathetic trunk .a 2117 to 3028 1 to 923       923/931
(99 %)
23 diff
(97.6 %id)
BQ224175 large cell carcinoma, lung .a 2118 to 2978 1 to 862       862/862
(100 %)
5 diff
(99.5 %id)
BQ889431 dorsal root ganglia .a 2138 to 2944 1 to 813       813/977
(83 %)
14 diff
(98.6 %id)
TI_154135229   .a 2159 to 3066 983 to 85   AAA   899/1019
(88 %)
18 diff
(98.3 %id)
TI_149306831   .a 2171 to 3060 975 to 94   AAA   882/937
(94 %)
17 diff
(98.2 %id)
CR591756 HeLa cells Cot 25-normalized .a 2173 to 3406 1 to 1234       1234/1234
(100 %)
0 diff
(100 %id)
BE878640 large cell carcinoma, undifferentiated, lung .a 2182 to 2959 1 to 768       768/931
(82 %)
20 diff
(97.9 %id)
BI763200 pooled colon, kidney, stomach .a 2223 to 2914 1 to 691       691/691
(100 %)
1 diff
(99.9 %id)
CN368630 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2276 to 2936 9 to 669       661/669
(98 %)
0 diff
(100 %id)
BM782299 myeloma .a 2308 to 2944 1 to 637       637/637
(100 %)
0 diff
(100 %id)
BG680697 skin, squamous cell carcinoma .a 2327 to 3303 1 to 984       984/1014
(97 %)
45 diff
(95.6 %id)
BU686641 lung, Primary Lung Epithelial Cells .a 2345 to 3060 733 to 19   AAA   715/715
(100 %)
1 diff
(99.9 %id)
CF453550 peripheral nervous system .a 2377 to 3129 1 to 752       752/752
(100 %)
4 diff
(99.5 %id)
CN368652 embryonic stem cells, cell lines H1, H7, andH9 .a 2402 to 3120 1 to 719       719/719
(100 %)
0 diff
(100 %id)
BU736985 eye, lens .a 2413 to 3066 670 to 17   AAA   654/654
(100 %)
1 diff
(99.9 %id)
AU147964 mammary gland .a 2493 to 3071 580 to 1       580/580
(100 %)
5 diff
(99.2 %id)
TI_154127511   .a 2515 to 3434 1008 to 109   AAA   900/972
(92 %)
37 diff
(96.2 %id)
TI_149311996   .a 2598 to 3435 901 to 82   AAA   820/925
(88 %)
19 diff
(98.0 %id)
AL548097 placenta, Placenta Cot 25-normalized .a 2614 to 3724 1100 to 1       1100/1104
(99 %)
16 diff
(98.6 %id)
BM696770 eye, lens .a 2632 to 3110 1 to 479   fully sequenced,   479/479
(100 %)
0 diff
(100 %id)
BG287605 bladder, transitional cell papilloma, cell line .a 2646 to 3388 1 to 740       740/904
(81 %)
15 diff
(98.4 %id)
TI_154115399   .a 2654 to 3435 863 to 92   AAA   772/972
(79 %)
10 diff
(99.0 %id)
TI_154127371   .a 2654 to 3435 860 to 87   AAA   774/943
(82 %)
10 diff
(99.0 %id)
BG285948 bladder, transitional cell papilloma, cell line .a 2668 to 3421 1 to 759       759/952
(79 %)
18 diff
(98.2 %id)
CB851542 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 2669 to 3435 778 to 19   AAA   760/764
(99 %)
11 diff
(98.6 %id)
AA843133 parathyroid gland, parathyroid tumor .a 2682 to 3435 771 to 12   AAA   760/763
(99 %)
18 diff
(97.7 %id)
BG171672 hypernephroma, cell line, Kidney .a 2693 to 3395 1 to 704       704/704
(100 %)
3 diff
(99.6 %id)
BM692599 eye, human retina .a 2704 to 3229 1 to 526       526/526
(100 %)
0 diff
(100 %id)
CA417001 Chondrosarcoma Cell line .a 2704 to 3435 747 to 19   AAA   729/729
(100 %)
3 diff
(99.6 %id)
BQ279078 adenocarcinoma, cell line, breast .a 2722 to 3431 1 to 713       713/715
(99 %)
2 diff
(99.8 %id)
CD368627 Alveolar Macrophage, lung .a 2734 to 3435 720 to 19   AAA   702/702
(100 %)
0 diff
(100 %id)
CA449138 Chondrosarcoma, Left Pubic Bone .a 2738 to 3435 715 to 19   AAA   697/700
(99 %)
1 diff
(99.9 %id)
BQ447334 Knee, Osteoarthritic Cartilage .a 2738 to 3435 715 to 19   AAA   697/700
(99 %)
3 diff
(99.6 %id)
BQ018387 lung, Metastatic Chondrosarcoma .a 2749 to 3435 705 to 19   AAA   687/687
(100 %)
2 diff
(99.8 %id)
BM708531 eye, RPE and Choroid .a 2752 to 3197 1 to 446   fully sequenced,   446/446
(100 %)
0 diff
(100 %id)
CB055235.
matches multiple genes
brain, glioblastoma (pooled) .a 2758 to 3435 1 to 677   AAA also hits gene CTNNA1P1 677/677
(100 %)
4 diff
(99.5 %id)
BX365390 Placenta Cot 25-normalized .a 2768 to 3726 960 to 1       960/960
(100 %)
7 diff
(99.3 %id)
CD370887 Alveolar Macrophage, lung .a 2779 to 3435 675 to 19   AAA   657/657
(100 %)
0 diff
(100 %id)
TI_154030081   .a 2883 to 3755 924 to 61   AAA   864/929
(93 %)
11 diff
(98.9 %id)
AW250859 lung, small cell carcinoma .a 2890 to 3434 555 to 11   AAA   545/545
(100 %)
0 diff
(100 %id)
TI_149300991   .a 2894 to 3755 909 to 55   AAA   855/980
(87 %)
15 diff
(98.5 %id)
TI_149311778   .a 2894 to 3752 931 to 81   AAA   851/948
(89 %)
13 diff
(98.7 %id)
AA132489 colon, tumor .a 2968 to 3436 469 to 1       469/469
(100 %)
0 diff
(100 %id)
BU624488 cell lines, Enchondroma .a 2974 to 3757 802 to 19   tiling clone, AAA   784/784
(100 %)
2 diff
(99.8 %id)
CA427699 Bone, Subchondral Bone .a 2987 to 3757 789 to 19   AAA   771/771
(100 %)
2 diff
(99.8 %id)
CB851518 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 2995 to 3752 776 to 19   AAA   758/758
(100 %)
0 diff
(100 %id)
CA422675 cell lines, Chondrosarcoma .a 3014 to 3754 759 to 19   AAA   741/741
(100 %)
0 diff
(100 %id)
CA427731 Bone, Subchondral Bone .a 3046 to 3755 728 to 19   AAA   710/710
(100 %)
2 diff
(99.8 %id)
BU735284 eye, lens .a 3080 to 3435 377 to 19   fully sequenced, AAA   359/359
(100 %)
1 diff
(99.8 %id)
AA010700 heart .a 3152 to 3400 1 to 252   fully sequenced,   252/252
(100 %)
0 diff
(100 %id)
BU730829 eye, RPE and Choroid .a 3167 to 3755 607 to 19   fully sequenced, AAA   589/589
(100 %)
0 diff
(100 %id)
BJ993239 hepatoblastoma .a 3199 to 3720 522 to 1       522/522
(100 %)
0 diff
(100 %id)
AA233515 brain, neuroepithelial cells .a 3350 to 3756 406 to 1       406/406
(100 %)
1 diff
(99.8 %id)
AA010701 heart .a 3370 to 3750 381 to 1   fully sequenced,   381/381
(100 %)
0 diff
(100 %id)
DC425960 tongue, tumor tissue .a 3422 to 3755 334 to 1       334/334
(100 %)
0 diff
(100 %id)
DC409171 thymus .b 1 to 575 3 to 577   tiling clone,   577/577
(100 %)
2 diff
(99.7 %id)
U03100 colon .b 212 to 3749 1 to 3526   tiling clone,   3523/3526
(99 %)
63 diff
(98.3 %id)
AV707346 adrenal gland .b 2126 to 2882 1 to 754   tiling clone,   754/754
(100 %)
15 diff
(98.1 %id)
DC418782 trachea .c 1 to 566 4 to 569       569/569
(100 %)
3 diff
(99.5 %id)
AK300439 placenta .c 1 to 2741 3 to 2743 A369P tiling clone,   2743/2743
(100 %)
4 diff
(99.9 %id)
BP285857 lung .c 1 to 580 3 to 582   tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
BP285901 lung .c 1 to 573 3 to 575       575/581
(98 %)
3 diff
(99.5 %id)
BP286611 lung .c 1 to 580 3 to 582       582/582
(100 %)
5 diff
(99.2 %id)
DC369030   .c 1 to 543 3 to 545       545/545
(100 %)
4 diff
(99.3 %id)
DC382517 placenta .c 1 to 553 3 to 555       555/555
(100 %)
3 diff
(99.5 %id)
DC423070 uterus .c 1 to 541 3 to 543       543/543
(100 %)
1 diff
(99.9 %id)
BP240865 Liver .c 1 to 574 2 to 575       575/575
(100 %)
3 diff
(99.5 %id)
DC423101 uterus .c 1 to 545 2 to 546       546/546
(100 %)
0 diff
(100 %id)
DC401735 testis .c 8 to 547 1 to 540       540/540
(100 %)
0 diff
(100 %id)
DC422527 uterus .c 28 to 540 1 to 513       513/513
(100 %)
0 diff
(100 %id)
DC394870 testis .c 29 to 569 1 to 541       541/541
(100 %)
0 diff
(100 %id)
DC423864 uterus .c 29 to 607 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DC343173 thalamus .c 30 to 580 1 to 551       551/551
(100 %)
0 diff
(100 %id)
BP285238 lung .c 30 to 611 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC347734 tongue, tumor tissue .c 31 to 569 1 to 539       539/539
(100 %)
1 diff
(99.9 %id)
DC417217 trachea .d 1 to 286 17 to 304       290/290
(100 %)
2 diff
(99.4 %id)
AK296708 tongue, tumor tissue .d 1 to 3102 7 to 3108 exact tiling clone,   3102/3108
(99 %)
6 diff
(99.9 %id)
DC322701 brain .d 1 to 292 7 to 298       292/298
(97 %)
6 diff
(98.0 %id)
DC345652 tongue, tumor tissue .d 1 to 593 7 to 599       593/599
(98 %)
6 diff
(99.0 %id)
DA349847 substantia nigra .e 1 to 587 2 to 588   tiling clone, capped   587/587
(100 %)
0 diff
(100 %id)
DA368273 subthalamic nucleus .e 69 to 640 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA526000 brain .e 164 to 731 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA490102 brain .e 166 to 743 2 to 579   capped   578/579
(99 %)
4 diff
(99.4 %id)
DA402217 thalamus .e 168 to 715 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA515049 brain .e 169 to 719 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA518102 brain .e 169 to 722 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA796901 brain .e 169 to 714 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA510829 brain .e 170 to 742 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA785476 brain .e 170 to 759 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA201916 brain .e 171 to 775 2 to 606   capped   605/605
(100 %)
1 diff
(99.9 %id)
DA533584 brain .e 171 to 688 2 to 521   capped   520/528
(98 %)
8 diff
(98.5 %id)
DA679596   .e 171 to 727 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA795073 brain .e 171 to 688 2 to 520   capped   519/520
(99 %)
2 diff
(99.7 %id)
DA781882 brain .e 173 to 740 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA057957 cerebellum .e 174 to 736 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA504137 brain .e 180 to 734 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA123897 cerebellum .e 182 to 739 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA200192 brain .e 182 to 764 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA520237 brain .e 182 to 749 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA523052 brain .e 183 to 742 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA771107 brain .e 184 to 749 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA168876 amygdala .e 189 to 746 16 to 573   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA784355 brain .e 193 to 769 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA796418 brain .e 201 to 654 2 to 457   capped   456/456
(100 %)
3 diff
(99.4 %id)
DA783234 brain .e 203 to 639 2 to 438   capped   437/437
(100 %)
1 diff
(99.8 %id)
DA176973 amygdala .e 204 to 651 2 to 449   capped   448/451
(99 %)
2 diff
(99.6 %id)
DA239528 brain .e 204 to 798 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA302955 hippocampus .e 204 to 674 2 to 472   capped   471/471
(100 %)
1 diff
(99.8 %id)
DA512474 brain .e 204 to 737 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DA750366   .e 204 to 790 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA767987 brain .e 204 to 668 2 to 466   capped   465/465
(100 %)
0 diff
(100 %id)
DA787730 brain .e 204 to 792 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA793007 brain .e 204 to 701 2 to 499   capped   498/498
(100 %)
2 diff
(99.6 %id)
DA290909 hippocampus .e 206 to 790 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
BP229916 brain .e 207 to 788 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA303551 hippocampus .e 211 to 794 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA717728   .e 211 to 789 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA783703 brain .e 211 to 798 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA393189 thalamus .e 214 to 794 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA500218 brain .e 214 to 794 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
BX461904 brain, fetal brain .e 216 to 1128 1 to 912       912/912
(100 %)
4 diff
(99.6 %id)
DA259131 caudate nucleus .e 229 to 798 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA772367 brain .e 229 to 805 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DA775250 brain .e 229 to 821 2 to 594   capped   593/593
(100 %)
1 diff
(99.9 %id)
DA776433 brain .e 229 to 808 2 to 581   capped   580/581
(99 %)
2 diff
(99.7 %id)
DA787156 brain .e 229 to 825 2 to 600   capped   599/599
(100 %)
4 diff
(99.4 %id)
DA794041 brain .e 229 to 866 2 to 639   capped   638/638
(100 %)
0 diff
(100 %id)
DA533692 brain .e 231 to 802 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA794571 brain .e 235 to 799 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA774910 brain .e 250 to 821 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA793685 brain .e 253 to 810 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA487767 brain .e 257 to 805 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA507836 brain .e 257 to 834 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA779200 brain .e 258 to 838 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA514748 brain .e 262 to 815 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA785319 brain .e 281 to 868 12 to 599   capped   588/598
(98 %)
7 diff
(98.9 %id)
DA784752 brain .e 285 to 852 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA777697 brain .e 289 to 873 2 to 586   capped   585/585
(100 %)
2 diff
(99.7 %id)
DA514656 brain .e 297 to 853 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA387239 thalamus .e 344 to 935 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
DA524267 brain .e 346 to 908 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA342825 substantia nigra .e 383 to 957 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DB173421 kidney, tumor tissue .e 392 to 965 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BC031262 Brain, hippocampus .e 421 to 3106 1 to 2685 exact tiling clone, available from MGC, AAA   2685/2685
(100 %)
9 diff
(99.7 %id)
BG705086 brain, hippocampus .e 423 to 918 8 to 522       513/1001
(51 %)
39 diff
(96.2 %id)
DA784424 brain .e 437 to 1033 2 to 600   capped   599/599
(100 %)
3 diff
(99.5 %id)
DA781712 brain .e 450 to 1027 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA781753 brain .e 450 to 1024 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA086460 cerebellum .f 1 to 467 5 to 471   capped   470/470
(100 %)
0 diff
(100 %id)
DA087869 cerebellum .f 1 to 561 5 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA496962 brain .f 1 to 578 5 to 582   tiling clone, capped   581/581
(100 %)
0 diff
(100 %id)
DA506553 brain .f 1 to 559 5 to 563   capped   562/564
(99 %)
2 diff
(99.7 %id)
DA772392 brain .f 1 to 573 5 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
DA522454 brain .f 1 to 563 4 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA521207 brain .f 1 to 570 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA507898 brain .f 7 to 594 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA336265 hippocampus .f 9 to 581 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA393990 thalamus .f 9 to 590 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA243258 brain .f 10 to 606 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA529569 brain .f 10 to 461 2 to 453   capped   452/452
(100 %)
1 diff
(99.8 %id)
DA389302 thalamus .f 15 to 605 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA394462 thalamus .f 17 to 611 2 to 595   capped   594/599
(99 %)
1 diff
(99.9 %id)
DA209080 brain .f 21 to 596 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
BI668550 brain, hypothalamus .f 25 to 734 1 to 710       710/710
(100 %)
7 diff
(99.1 %id)
DA522670 brain .f 29 to 589 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
BP362222 thalamus .f 29 to 607 1 to 579       579/582
(99 %)
4 diff
(99.4 %id)
DA168178 amygdala .f 30 to 595 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
TI_44344721   .f 30 to 734 92 to 796       705/796
(88 %)
8 diff
(99.0 %id)
DB174447 kidney, tumor tissue .f 30 to 488 2 to 460   capped   459/459
(100 %)
2 diff
(99.6 %id)
DA109945 cerebellum .f 31 to 578 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA145200 amygdala .f 31 to 610 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA199490 brain .f 31 to 619 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DA208109 brain .f 31 to 600 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA303389 hippocampus .f 31 to 617 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA388355 thalamus .f 31 to 625 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA496253 brain .f 31 to 598 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA499884 brain .f 31 to 593 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA500246 brain .f 31 to 595 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA500902 brain .f 31 to 603 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA508082 brain .f 31 to 580 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA526159 brain .f 31 to 593 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA701188   .f 31 to 552 2 to 523   capped   522/522
(100 %)
1 diff
(99.9 %id)
DA701214   .f 31 to 547 2 to 518   capped   517/517
(100 %)
1 diff
(99.9 %id)
DA704220   .f 31 to 580 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA745339   .f 31 to 597 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA779347 brain .f 31 to 600 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA786850 brain .f 31 to 606 2 to 580   capped   577/579
(99 %)
4 diff
(99.4 %id)
DA788001 brain .f 31 to 619 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DA790529 brain .f 31 to 520 2 to 491   capped   490/490
(100 %)
0 diff
(100 %id)
DA209099 brain .f 32 to 606 11 to 585   capped   575/584
(98 %)
7 diff
(98.9 %id)
DA396854 thalamus .f 32 to 624 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA796424 brain .f 32 to 317 2 to 287   capped   286/286
(100 %)
0 diff
(100 %id)
DA208287 brain .f 33 to 579 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA293665 hippocampus .f 33 to 587 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA305119 hippocampus .f 34 to 597 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BP200067 amygdala .f 37 to 616 1 to 580       580/581
(99 %)
1 diff
(99.9 %id)
BP230002 brain .f 37 to 635 1 to 599       599/599
(100 %)
3 diff
(99.5 %id)
BP311155 brain .f 37 to 619 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA771248 brain .f 37 to 605 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA090451 cerebellum .f 38 to 606 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA159405 amygdala .f 38 to 605 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA181044 amygdala .f 38 to 604 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA301677 hippocampus .f 38 to 590 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA347174 substantia nigra .f 38 to 592 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DA485671 brain .f 38 to 587 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA515198 brain .f 38 to 591 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA523129 brain .f 38 to 603 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA718066   .f 38 to 591 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA779334 brain .f 38 to 599 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA779746 brain .f 38 to 616 2 to 581   capped   578/580
(99 %)
1 diff
(99.9 %id)
DA785954 brain .f 38 to 611 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA792176 brain .f 38 to 592 2 to 556   capped   555/557
(99 %)
3 diff
(99.5 %id)
DA793438 brain .f 38 to 582 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
TI_57241469   .f 40 to 806 24 to 798       775/798
(97 %)
15 diff
(98.2 %id)
DA142164 alzheimer cortex .f 41 to 612 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA301904 hippocampus .f 41 to 616 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA391071 thalamus .f 41 to 605 2 to 566   capped   565/566
(99 %)
1 diff
(99.9 %id)
DA702919   .f 41 to 520 2 to 481   capped   480/480
(100 %)
1 diff
(99.8 %id)
DA775126 brain .f 41 to 625 2 to 586   capped   585/585
(100 %)
2 diff
(99.7 %id)
DA787375 brain .f 41 to 614 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA787741 brain .f 41 to 629 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DA790541 brain .f 41 to 601 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
BI913575 brain .f 42 to 806 1 to 773       773/773
(100 %)
11 diff
(98.6 %id)
DA713288   .f 43 to 594 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
AA205996   .f 52 to 524 1 to 474       474/576
(82 %)
12 diff
(98.0 %id)
DA520968 brain .f 56 to 620 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
CB152051 brain .f 57 to 722 1 to 666   tiling clone,   666/666
(100 %)
0 diff
(100 %id)
BY796728 eye .f 58 to 628 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DA796195 brain .f 62 to 609 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
DA797056 brain .f 62 to 623 2 to 563   capped   562/563
(99 %)
1 diff
(99.9 %id)
BP230475 brain .f 84 to 662 1 to 581       581/581
(100 %)
6 diff
(99.0 %id)
DA779434 brain .f 84 to 656 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
BQ900965 sympathetic trunk .f 699 to 1566 11 to 883   tiling clone,   873/889
(98 %)
24 diff
(97.4 %id)
DB238027 trachea .f 932 to 1505 2 to 575   capped   574/579
(99 %)
2 diff
(99.7 %id)
DA246926 brain .f 965 to 1556 2 to 593   tiling clone, capped   592/592
(100 %)
0 diff
(100 %id)
CN368642 embryonic stem cells, cell lines H1, H7, andH9 .f 1373 to 2093 1 to 721   tiling clone,   721/721
(100 %)
1 diff
(99.9 %id)
CV807422 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .f 1374 to 2168 1 to 796       796/799
(99 %)
8 diff
(99.0 %id)
BF754652 colon .f 1549 to 2014 1 to 465       465/478
(97 %)
13 diff
(97.3 %id)
DA933825 Spleen .f 1718 to 2294 2 to 578   tiling clone, capped   577/577
(100 %)
2 diff
(99.7 %id)
CA396118 eye, RPE/choroid .f 1807 to 2306 6 to 505   tiling clone,   500/505
(99 %)
6 diff
(98.9 %id)
BU556908 ovary, teratocarcinoma, cell line .g 1 to 893 1 to 897   tiling clone,   897/938
(95 %)
13 diff
(98.7 %id)
BX093689 liver and spleen .g 861 to 1607 34 to 782   tiling clone,   749/786
(95 %)
8 diff
(99.0 %id)
BY997084   .h 1 to 677 8 to 684   tiling clone,   677/684
(98 %)
6 diff
(99.2 %id)
BP196490 adrenal gland .h 390 to 970 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BM153107 leukopheresis .h 392 to 936 545 to 1       545/545
(100 %)
2 diff
(99.7 %id)
BG824251 adenocarcinoma cell line, colon .h 659 to 1331 1 to 676   tiling clone,   676/676
(100 %)
3 diff
(99.6 %id)
DC346569 tongue, tumor tissue .i 1 to 572 1 to 572   tiling clone,   572/572
(100 %)
1 diff
(99.9 %id)
CB144483 Liver .i 510 to 1017 1 to 508   tiling clone,   508/526
(96 %)
2 diff
(99.7 %id)
BQ422253 melanotic melanoma, skin .j 1 to 804 1 to 810 A239G D242E L243P I244D Y245I ... tiling clone,   810/858
(94 %)
9 diff
(99.0 %id)
DA686215   .k 1 to 543 2 to 544   tiling clone, capped   543/543
(100 %)
0 diff
(100 %id)
CN368645 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .k 294 to 1018 1 to 723       723/723
(100 %)
2 diff
(99.8 %id)
DB135287 thymus .k 520 to 1070 2 to 552   tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
AL703072 human skeletal muscle .k 617 to 1138 1 to 522   tiling clone,   522/522
(100 %)
10 diff
(98.1 %id)
DC381374 placenta .l 1 to 570 1 to 570   tiling clone,   570/570
(100 %)
0 diff
(100 %id)
BG482204 choriocarcinoma, placenta .l 73 to 761 1 to 691 A179R L180P P182T E183* tiling clone,   691/695
(99 %)
4 diff
(99.5 %id)
BG431930 Kidney .m 1 to 685 1 to 681 L180* tiling clone,   681/851
(80 %)
12 diff
(98.6 %id)
DA285390 corpus callosum .n 1 to 558 4 to 561   tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
BQ319802 colon .n 401 to 772 384 to 15   tiling clone,   370/384
(96 %)
0 diff
(100 %id)
DC344455 thalamus .o 1 to 812 1 to 649   tiling clone,   649/649
(100 %)
1 diff
(99.9 %id)
DC325028 brain .o 168 to 741 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC415326 trachea .o 202 to 768 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC320949 brain .o 208 to 728 1 to 521       521/521
(100 %)
0 diff
(100 %id)
DC325339 brain .o 292 to 879 1 to 588   tiling clone,   588/588
(100 %)
0 diff
(100 %id)
DC335801 hippocampus .o 292 to 875 1 to 585       585/585
(100 %)
1 diff
(99.9 %id)
DC418615 trachea .o 303 to 857 1 to 555       555/555
(100 %)
2 diff
(99.7 %id)
DC320510 brain .o 307 to 865 1 to 559       559/559
(100 %)
0 diff
(100 %id)
AW379891 head_neck .o 815 to 1224 1 to 410   tiling clone,   410/553
(74 %)
10 diff
(98.2 %id)
DB153190 thymus .p 1 to 575 2 to 578 L29V E30G P31A L32S V33C ... tiling clone, capped   577/577
(100 %)
2 diff
(99.7 %id)
BP229025 brain .q 1 to 581 2 to 582   tiling clone,   582/582
(100 %)
0 diff
(100 %id)
DA485594 brain .q 1 to 580 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA508488 brain .q 1 to 578 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA785832 brain .q 1 to 499 2 to 500   capped   499/499
(100 %)
0 diff
(100 %id)
DA785324 brain .q 7 to 572 2 to 566   capped   565/565
(100 %)
6 diff
(99.0 %id)
DA773044 brain .q 8 to 600 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA719602   .q 11 to 499 2 to 490   capped   489/489
(100 %)
0 diff
(100 %id)
DA261890 caudate nucleus .q 150 to 724 2 to 576 exact tiling clone, capped   575/575
(100 %)
0 diff
(100 %id)
DA192573 amygdala .r 1 to 590 2 to 591   tiling clone, capped   590/590
(100 %)
1 diff
(99.9 %id)
W01113 liver and spleen .r 563 to 954 10 to 403   tiling clone,   394/403
(97 %)
15 diff
(96.3 %id)
N74075 liver and spleen .r 1526 to 1709 184 to 1   tiling clone,   184/184
(100 %)
1 diff
(99.5 %id)
DC369958   .s 1 to 568 1 to 568 exact tiling clone,   568/568
(100 %)
0 diff
(100 %id)
W58275 heart .t 1 to 291 1 to 294   tiling clone, fully sequenced,   294/294
(100 %)
0 diff
(100 %id)
W58276 heart .t 261 to 658 417 to 20   tiling clone, fully sequenced, AAA   398/398
(100 %)
2 diff
(99.5 %id)
DB204737 trachea .u 1 to 572 2 to 573   tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
BF352501 head_neck .u 571 to 996 444 to 20   tiling clone,   425/444
(95 %)
16 diff
(96.4 %id)
DA788295 brain .va 1 to 583 8 to 591   tiling clone, capped   590/590
(100 %)
2 diff
(99.7 %id)
TI_57242246   .va 5 to 665 20 to 675 D7T L8C R9V R10D Q11S ... tiling clone,   656/676
(97 %)
12 diff
(98.3 %id)
DA300935 hippocampus .vb 1 to 562 3 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA208230 brain .vb 1 to 575 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA388050 thalamus .vb 1 to 584 2 to 585   tiling clone, capped   584/584
(100 %)
0 diff
(100 %id)
DB142163 thymus .vb 1 to 532 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DA786575 brain .vb 3 to 589 2 to 588   capped   587/591
(99 %)
2 diff
(99.7 %id)
BI917185 brain .vb 44 to 693 1 to 645 D7T L8C R9V R10D Q11S ... tiling clone,   645/646
(99 %)
6 diff
(99.1 %id)
DA154825 amygdala .vc 1 to 590 2 to 591 exact tiling clone, capped   590/591
(99 %)
3 diff
(99.5 %id)
DA710701   .vd 1 to 536 4 to 540 exact tiling clone, capped   539/539
(100 %)
1 diff
(99.9 %id)
TI_2194632135   .ve-u 1 to 988 1245 to 265 L3S P4S Q6P A8G R9K ... tiling clone,   981/1245
(78 %)
0 diff
(100 %id)
DC423286 uterus .vf 1 to 538 6 to 543   tiling clone,   543/543
(100 %)
6 diff
(98.9 %id)
BX475025   .vf 26 to 556 1 to 531 exact tiling clone,   531/531
(100 %)
0 diff
(100 %id)
DC416093 trachea .vg 1 to 559 3 to 561 exact tiling clone,   561/561
(100 %)
2 diff
(99.7 %id)
DA177311 amygdala .vh 1 to 510 2 to 511 exact tiling clone, capped   510/510
(100 %)
1 diff
(99.9 %id)
DA522218 brain .vi 1 to 567 2 to 568 exact tiling clone, capped   567/567
(100 %)
2 diff
(99.7 %id)
DA793701 brain .vi 8 to 531 2 to 525 exact tiling clone, capped   524/524
(100 %)
0 diff
(100 %id)
DA776375 brain .vi 13 to 594 2 to 584 exact tiling clone, capped   581/583
(99 %)
1 diff
(99.9 %id)
DA487938 brain .vj 1 to 566 9 to 574 exact tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
DA485762 brain .vk 1 to 574 4 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA518761 brain .vk 1 to 564 4 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA771556 brain .vk 1 to 572 4 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA507907 brain .vk 1 to 579 3 to 581   capped   580/580
(100 %)
2 diff
(99.7 %id)
DA262659 caudate nucleus .vk 1 to 560 2 to 561   capped   560/561
(99 %)
1 diff
(99.9 %id)
DA283741 corpus callosum .vk 1 to 581 2 to 582 exact tiling clone, capped   581/581
(100 %)
0 diff
(100 %id)
DA492468 brain .vk 1 to 577 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA513897 brain .vk 1 to 565 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA524266 brain .vk 1 to 564 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA525693 brain .vk 1 to 569 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA691648   .vk 1 to 569 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA713143   .vk 1 to 540 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DA724980   .vk 1 to 576 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA742711   .vk 1 to 554 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA770593 brain .vk 1 to 562 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA771975 brain .vk 1 to 580 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA777495 brain .vk 1 to 577 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA782682 brain .vk 1 to 583 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA783782 brain .vk 1 to 572 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DB178012 kidney, tumor tissue .vk 1 to 559 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA526419 brain .vk 3 to 564 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA153231 amygdala .vk 5 to 572 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA501882 brain .vk 5 to 563 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
BP229105 brain .vk 7 to 589 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
DA159799 amygdala .vk 8 to 475 2 to 469   capped   468/468
(100 %)
1 diff
(99.8 %id)
DA201811 brain .vk 8 to 540 2 to 534   capped   533/533
(100 %)
2 diff
(99.7 %id)
DA203215 brain .vk 8 to 578 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA207754 brain .vk 8 to 578 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA259343 caudate nucleus .vk 8 to 570 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DA273453 caudate nucleus .vk 8 to 558 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA275411 corpus callosum .vk 8 to 562 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA324388 hippocampus .vk 8 to 541 2 to 536   capped   535/544
(98 %)
1 diff
(99.9 %id)
DA401224 thalamus .vk 8 to 575 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA513358 brain .vk 8 to 580 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA524489 brain .vk 8 to 564 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA526570 brain .vk 8 to 560 2 to 554   capped   553/554
(99 %)
0 diff
(100 %id)
DA699212   .vk 8 to 541 2 to 534   capped   533/534
(99 %)
3 diff
(99.5 %id)
DA708859   .vk 8 to 570 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA714289   .vk 8 to 546 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA726443   .vk 8 to 567 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA744230   .vk 8 to 572 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA770046 brain .vk 8 to 576 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA772224 brain .vk 8 to 573 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA790557 brain .vk 8 to 564 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DA791681 brain .vk 8 to 540 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DA788868 brain .vk 10 to 575 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA176222 amygdala .vk 11 to 569 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA784951 brain .vk 11 to 578 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA796556 brain .vk 11 to 557 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA715792   .vk 13 to 563 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA780865 brain .vk 13 to 576 2 to 566   capped   565/565
(100 %)
3 diff
(99.5 %id)
DA785435 brain .vk 13 to 442 2 to 431   capped   430/430
(100 %)
1 diff
(99.8 %id)
DA515140 brain .vk 26 to 577 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BQ877736 melanotic melanoma, cell line, skin .vl 1 to 612 8 to 619 I26X N46V C47D D48S T49A ... tiling clone,   619/849
(72 %)
61 diff
(92.9 %id)
BU943133 mixed (pool of 40 RNAs) .vm 1 to 233 4 to 239 exact tiling clone,   239/707
(33 %)
5 diff
(99.3 %id)
BG503649 embryonal carcinoma, testis .vm 1 to 736 1 to 764 E21G T22E E23Q F24S H25F ... tiling clone,   764/765
(99 %)
37 diff
(95.2 %id)
Z17416   .vm 550 to 744 1 to 195   tiling clone,   195/195
(100 %)
0 diff
(100 %id)
BM701310 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .vm 606 to 835 230 to 1   tiling clone, AAA Submitted on the opposite strand 230/237
(97 %)
2 diff
(99.2 %id)
BM715965 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .vm 606 to 835 230 to 1   AAA Submitted on the opposite strand 230/237
(97 %)
2 diff
(99.2 %id)
BX951865   .vn 1 to 547 8 to 559 exact tiling clone,   554/559
(99 %)
2 diff
(99.7 %id)
DA210725 brain .vn 33 to 593 2 to 562 exact tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
DA391775 thalamus .vn 56 to 636 2 to 583 Q2K S30G tiling clone, capped   582/582
(100 %)
2 diff
(99.7 %id)
BF913553 uterus_tumor .vo -10 to 350 364 to 3     Submitted on the opposite strand 362/364
(99 %)
0 diff
(100 %id)
BF913601 uterus_tumor .vo -10 to 351 363 to 1     Submitted on the opposite strand 363/363
(100 %)
11 diff
(97.0 %id)
BF914288 uterus_tumor .vo -10 to 348 366 to 9     Submitted on the opposite strand 358/366
(97 %)
0 diff
(100 %id)
BF915719 uterus_tumor .vo -10 to 346 361 to 5     Submitted on the opposite strand 357/361
(98 %)
0 diff
(100 %id)
BF914283 uterus_tumor .vo -8 to 345 359 to 5     Submitted on the opposite strand 355/361
(98 %)
0 diff
(100 %id)
BF914287 uterus_tumor .vo -8 to 351 1 to 361       361/361
(100 %)
20 diff
(94.5 %id)
BF915244 uterus_tumor .vo -8 to 363 378 to 6     Submitted on the opposite strand 373/380
(98 %)
0 diff
(100 %id)
BF915306 uterus_tumor .vo -8 to 348 358 to 2     Submitted on the opposite strand 357/360
(99 %)
0 diff
(100 %id)
BF915472 uterus_tumor .vo -8 to 351 359 to 1     Submitted on the opposite strand 359/361
(99 %)
8 diff
(97.8 %id)
BQ380622 uterus_tumor .vo -8 to 349 359 to 4       356/361
(98 %)
0 diff
(100 %id)
DA274472 corpus callosum .vo 1 to 579 2 to 580   tiling clone, capped   579/579
(100 %)
0 diff
(100 %id)
BF932417 nervous_tumor .vo 163 to 460 299 to 1     Submitted on the opposite strand 299/299
(100 %)
6 diff
(98.0 %id)
DA299046 hippocampus .vo 186 to 757 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DB113996 thymus .vo 263 to 836 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
CN294015 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .vo 281 to 962 1 to 682       682/682
(100 %)
1 diff
(99.9 %id)
DA196605 amygdala .vo 292 to 850 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA866991 Prostate .vo 335 to 729 2 to 395   capped   394/394
(100 %)
2 diff
(99.5 %id)
AK055751 Kidney .vo 358 to 2401 1 to 2044 exact tiling clone, available from FLJ,   2044/2044
(100 %)
0 diff
(100 %id)
DA621453 Kidney .vo 359 to 809 2 to 454   capped   453/453
(100 %)
1 diff
(99.8 %id)
DB213909 trachea .vo 366 to 907 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA852634 placenta .vo 515 to 1060 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA378120 thalamus .vo 611 to 1138 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
TI_149312702   .vo 760 to 1710 1026 to 86 exact AAA   941/994
(94 %)
18 diff
(98.2 %id)
BM978254 lung .vo 994 to 1710 733 to 17 exact AAA   717/717
(100 %)
0 diff
(100 %id)
DB320404 Kidney .vo 1863 to 2401 539 to 1       539/539
(100 %)
0 diff
(100 %id)
DA792932 brain .vp 1 to 504 3 to 506   tiling clone, capped   505/505
(100 %)
0 diff
(100 %id)
DA210623 brain .vp 21 to 578 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA783417 brain .vp 21 to 607 2 to 590   capped   589/589
(100 %)
3 diff
(99.5 %id)
DA782542 brain .vp 28 to 610 2 to 584   tiling clone, capped   583/583
(100 %)
0 diff
(100 %id)
DA512359 brain .vp 46 to 588 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DA519650 brain .vp 70 to 604 2 to 537   capped   536/536
(100 %)
2 diff
(99.7 %id)
AW168750 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .vp 439 to 1099 660 to 1 F24V T27P N28M V29F P30H ... tiling clone,   660/660
(100 %)
10 diff
(98.5 %id)
GD157675   .vp 947 to 1099 1 to 153   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 153/153
(100 %)
6 diff
(96.1 %id)
DA118939 cerebellum .vq 1 to 527 7 to 534   capped   533/533
(100 %)
1 diff
(99.9 %id)
DA521536 brain .vq 1 to 565 7 to 571   tiling clone, capped   570/570
(100 %)
1 diff
(99.9 %id)
DA410515 thalamus .vq 31 to 588 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA777675 brain .vq 38 to 621 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA794098 brain .vq 56 to 670 2 to 616   tiling clone, capped   615/615
(100 %)
2 diff
(99.7 %id)
AA143637 Pancreas .vq 583 to 1020 465 to 23 Q11T L12T R13S K14A A15K ... tiling clone, Submitted on the opposite strand 443/467
(94 %)
7 diff
(98.6 %id)
CA976056 sciatic nerve .vr-u -11 to 907 1 to 932 exact tiling clone,   932/932
(100 %)
15 diff
(98.4 %id)
BM986982 mixed .vr-u 502 to 782 338 to 57   tiling clone, AAA   282/320
(88 %)
0 diff
(100 %id)
BM477601 leiomyosarcoma, uterus .vs 1 to 767 44 to 810 E55G G71X K90Q R101P D102* tiling clone,   927/1099
(84 %)
26 diff
(97.7 %id)
DA797422 brain .vt 1 to 533 2 to 535   tiling clone, capped   534/534
(100 %)
1 diff
(99.9 %id)
DA511253 brain .vt 168 to 711 2 to 545   capped   544/545
(99 %)
1 diff
(99.9 %id)
CB153735 brain .vt 221 to 889 1 to 669 exact tiling clone,   669/669
(100 %)
0 diff
(100 %id)
DA808967 brain .vu 1 to 515 3 to 517   capped   516/516
(100 %)
1 diff
(99.9 %id)
DB275529 uterus .vu 1 to 547 2 to 548   tiling clone, capped   547/547
(100 %)
0 diff
(100 %id)
BU521693 leiomyosarcoma, uterus .vu 7 to 865 1 to 866 K16X V33G N49Y E66G Q67P ... tiling clone,   866/897
(96 %)
23 diff
(97.5 %id)
DC381630 placenta .vu 28 to 612 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
DC345875 tongue, tumor tissue .vu 61 to 600 1 to 541       541/541
(100 %)
1 diff
(99.9 %id)
DC400694 testis .vu 61 to 560 1 to 501       501/536
(93 %)
3 diff
(99.5 %id)
DC417408 trachea .vu 62 to 651 1 to 591       591/591
(100 %)
3 diff
(99.5 %id)
BQ720253 sympathetic trunk .vv-u 1 to 818 1 to 826 V38R G39Q K40G G41L C42* tiling clone,   826/957
(86 %)
21 diff
(97.9 %id)
BM750796 Ascites, stomach .vv-u 67 to 575 1 to 508   tiling clone,   508/508
(100 %)
2 diff
(99.7 %id)
BF764683 colon_est .vv-u 481 to 835 9 to 363   tiling clone,   355/363
(97 %)
6 diff
(98.4 %id)
BF764505 colon_est .vv-u 482 to 795 18 to 332       315/335
(94 %)
15 diff
(95.6 %id)
BF908013 uterus_tumor .vw-u 1 to 259 36 to 294   tiling clone,   294/294
(100 %)
10 diff
(96.6 %id)
BI911694 leukocyte .vw-u 15 to 660 16 to 669 W6L I7D I8Y S9F K10Q ... tiling clone,   654/669
(97 %)
6 diff
(99.2 %id)
TI_57234137   .vw-u 15 to 660 16 to 669 W6L I7D I8Y S9F K10Q ...     654/669
(97 %)
6 diff
(99.2 %id)
BF827208 head_normal .vw-u 118 to 663 547 to 3 K10Q L42P tiling clone, Submitted on the opposite strand 545/547
(99 %)
0 diff
(100 %id)
CB266205 adipose .vw-u 319 to 829 1 to 511   tiling clone,   511/511
(100 %)
1 diff
(99.9 %id)
AW947489 lung_tumor .vw-u 356 to 686 24 to 353       330/364
(90 %)
3 diff
(99.2 %id)
BF825268 head_normal .vw-u 402 to 744 346 to 4     Submitted on the opposite strand 343/355
(96 %)
0 diff
(100 %id)
DA205194 brain .vx 1 to 570 4 to 573 exact tiling clone, capped   572/572
(100 %)
1 diff
(99.9 %id)
DA205844 brain .vx 58 to 639 2 to 583 exact tiling clone, capped   582/582
(100 %)
1 diff
(99.9 %id)
DA218621 brain .vy-u 1 to 627 2 to 628 exact tiling clone, capped   627/627
(100 %)
1 diff
(99.9 %id)
DA410396 thalamus .vz 1 to 559 2 to 560   tiling clone, capped   559/559
(100 %)
0 diff
(100 %id)
DA410464 thalamus .vz 1 to 558 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA776649 brain .vz 4 to 573 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA531638 brain .vz 7 to 610 2 to 606 exact tiling clone, capped   605/605
(100 %)
3 diff
(99.6 %id)
DA769606 brain .wa 1 to 588 2 to 589 exact tiling clone, capped   588/588
(100 %)
0 diff
(100 %id)
DA386922 thalamus .wa 8 to 578 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
BG621453 placenta .wb-u 1 to 580 1 to 585 exact tiling clone,   585/585
(100 %)
6 diff
(99.0 %id)
DA777879 brain .wc 1 to 578 2 to 580 exact tiling clone, capped   579/579
(100 %)
1 diff
(99.9 %id)
DA205163 brain .wd 1 to 567 2 to 569 S21F D22R S23F L25P E26G ... tiling clone, capped   568/568
(100 %)
2 diff
(99.7 %id)
DA525579 brain .we 1 to 561 5 to 565 exact tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
DA210075 brain .wf 1 to 555 4 to 558 exact tiling clone, capped   557/557
(100 %)
2 diff
(99.7 %id)
DB175307 kidney, tumor tissue .wg 1 to 553 2 to 554 exact tiling clone, capped   558/558
(100 %)
2 diff
(99.7 %id)
DB167186 kidney, tumor tissue .wh 1 to 550 5 to 554 exact tiling clone, capped   553/553
(100 %)
2 diff
(99.7 %id)
DA792045 brain .wi 1 to 544 8 to 552 K4E L32S tiling clone, capped   551/551
(100 %)
6 diff
(99.0 %id)
AL048791 Kidney .wj 1 to 532 9 to 542 D22R S23F L25P E26G T27K ... tiling clone,   542/542
(100 %)
13 diff
(97.7 %id)
DC417209 trachea .wk 1 to 520 10 to 529       521/521
(100 %)
1 diff
(99.9 %id)
DC324291 brain .wk 1 to 531 62 to 592 exact tiling clone,   531/592
(89 %)
0 diff
(100 %id)
BE709550 head_neck .wl 1 to 502 12 to 514 exact tiling clone,   503/514
(97 %)
6 diff
(98.9 %id)
BF352617 head_neck .wl 1 to 235 25 to 258   tiling clone,   234/258
(90 %)
6 diff
(97.7 %id)
BF352634 head_neck .wl 4 to 229 22 to 246       225/252
(89 %)
11 diff
(95.7 %id)
DB179432 kidney, tumor tissue .wm 1 to 493 2 to 495 C68L S69F I70H S71L N72K ... tiling clone, capped   494/494
(100 %)
6 diff
(98.8 %id)
DC296630 synovial membrane tissue from rheumatioidarthritis .wn 1 to 483 1 to 483 exact tiling clone,   483/483
(100 %)
0 diff
(100 %id)
CA396764 eye, RPE/choroid .wo-u 1 to 449 1 to 449 exact tiling clone,   449/449
(100 %)
0 diff
(100 %id)
AV754139 pituitary tumor .wp-u 1 to 366 1 to 357 K52V V54S S55N I56R Q57P ... tiling clone,   357/361
(98 %)
12 diff
(96.7 %id)
BE145735 head_neck .wq-u 1 to 234 1 to 234 exact tiling clone,   234/234
(100 %)
2 diff
(99.2 %id)
CB055234.
matches multiple genes
brain, glioblastoma (pooled) P1.a-u 1 to 674 700 to 25 L2R E3G G5V A6Q G7A ... tiling clone, AAA also hits gene CTNNA1P1 676/677
(99 %)
34 diff
(95.0 %id)
BF914284 uterus_tumor Gene CTNNA1, variant not shown              
BF914550 uterus_tumor Gene CTNNA1, variant not shown              
BF915293 uterus_tumor Gene CTNNA1, variant not shown              
BF915305 uterus_tumor Gene CTNNA1, variant not shown         Submitted on the opposite strand    
BF915473 uterus_tumor Gene CTNNA1, variant not shown         Submitted on the opposite strand    
BF915718 uterus_tumor Gene CTNNA1, variant not shown         Submitted on the opposite strand    
DA736055   Gene CTNNA1, variant not shown       capped      
1508 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd, .ve-u, .vf, .vg, .vh, .vi, .vj, .vk, .vl, .vm, .vn, .vo, .vp, .vq, .vr-u, .vs, .vt, .vu, .vv-u, .vw-u, .vx, .vy-u, .vz, .wa, .wb-u, .wc, .wd, .we, .wf, .wg, .wh, .wi, .wj, .wk, .wl, .wm, .wn, .wo-u, .wp-u, .wq-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI