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Gene CTLA4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
36 supporting clones for gene CTLA4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CD639535 pooled .a 1 to 689 1 to 684   tiling clone,   684/733
(93 %)
12 diff
(98.4 %id)
NM_005214.3   .a 3 to 1979 1 to 1977 exact RefSeq, AAA   1977/1977
(100 %)
0 diff
(100 %id)
BC070162 Blood, peripheral blood mononuclear cells(PBMC) cytoplasmic poly A RNA is pooled sample from 3 and6 hr after stimulation with PMA and Ionomycin. Thesereagents are used to activate T- cells that results inlymphokine and cytokine production. .a 4 to 887 1 to 884 T17A available from MGC, AAA   884/884
(100 %)
1 diff
(99.9 %id)
AK313732   .a 20 to 831 1 to 812 T17A     812/812
(100 %)
1 diff
(99.9 %id)
BC069566 PCR rescued clones .a 65 to 1023 1 to 959 T17A tiling clone, available from MGC,   959/959
(100 %)
1 diff
(99.9 %id)
BC074893 Lung, PCR rescued clones .a 129 to 881 1 to 753 exact tiling clone, available from MGC,   753/753
(100 %)
0 diff
(100 %id)
BC074842 Lung, PCR rescued clones .a 134 to 881 1 to 748 exact available from MGC,   748/748
(100 %)
0 diff
(100 %id)
AF486806   .a 160 to 641 1 to 482       482/482
(100 %)
0 diff
(100 %id)
AY209009   .a 160 to 831 1 to 672 T17A     672/672
(100 %)
1 diff
(99.9 %id)
L15006   .a 160 to 831 1 to 672 T17A M91T     672/672
(100 %)
2 diff
(99.8 %id)
NM_001037631.1   .b 1 to 1867 1 to 1867 exact RefSeq, AAA   1867/1867
(100 %)
0 diff
(100 %id)
DA817457   .b 19 to 584 2 to 567   tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
U90273 lymph node .b 269 to 682 1 to 414   tiling clone,   414/414
(100 %)
0 diff
(100 %id)
AY792514   .c 1 to 277 1 to 277 T17A tiling clone,   277/277
(100 %)
1 diff
(99.7 %id)
BE837501 prostate_normal .d-u 1 to 285 302 to 19   tiling clone,   284/304
(93 %)
0 diff
(100 %id)
BE837537 prostate_normal .d-u 1 to 288 312 to 25       288/314
(91 %)
0 diff
(100 %id)
BF329809 breast_normal .d-u 1 to 307 318 to 12       307/320
(95 %)
0 diff
(100 %id)
BE837454 prostate_normal .d-u 6 to 307 1 to 301   tiling clone,   301/312
(96 %)
4 diff
(98.8 %id)
AA210929 germinal center B cell .d-u 238 to 675 1 to 441   tiling clone,   441/441
(100 %)
5 diff
(98.9 %id)
AA210902 germinal center B cell .d-u 238 to 586 1 to 352   tiling clone,   352/355
(99 %)
22 diff
(93.9 %id)
BM997840 lung, Lung Focal Fibrosis .d-u 705 to 1293 607 to 19   tiling clone, AAA   589/598
(98 %)
9 diff
(98.5 %id)
AI733018 2 pooled tumors (clear cell type), Kidney .d-u 721 to 1300 583 to 4   tiling clone,   580/583
(99 %)
0 diff
(100 %id)
BG236211 blood, lymphocyte .d-u 759 to 1294 536 to 1       536/536
(100 %)
0 diff
(100 %id)
AI860199 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .d-u 788 to 1293 507 to 1       507/507
(100 %)
13 diff
(97.5 %id)
AW515943 lymph node, lymphoma, follicular mixed small and largecell .d-u 827 to 1099 273 to 1       273/273
(100 %)
0 diff
(100 %id)
TI_153991212   .d-u 829 to 1294 558 to 93   AAA   466/466
(100 %)
1 diff
(99.8 %id)
AI819438 lymph node, lymphoma, follicular mixed small and largecell .d-u 839 to 1099 261 to 1       261/261
(100 %)
0 diff
(100 %id)
BG058720 blood, lymphocyte .d-u 847 to 1295 460 to 12   AAA   449/449
(100 %)
0 diff
(100 %id)
AW207094   .d-u 893 to 1294 419 to 18   AAA   402/402
(100 %)
0 diff
(100 %id)
AA873138 2 pooled tumors (clear cell type), Kidney .d-u 1125 to 1300 178 to 3       176/178
(98 %)
0 diff
(100 %id)
AY999702   .e 1 to 214 1 to 214 exact tiling clone,   214/214
(100 %)
0 diff
(100 %id)
AF414120   Gene CTLA4, variant not shown       AAA Suspected internal deletion, this clone was ignored    
DQ785106   Gene CTLA4, variant not shown         Suspected internal deletion, this clone was ignored    
BX113243 2 pooled tumors (clear cell type), Kidney Gene CTLA4, variant not shown         Suspected internal deletion, this clone was ignored    
AI791416 2 pooled tumors (clear cell type), Kidney Gene CTLA4, variant not shown         Suspected internal deletion, this clone was ignored    
BG536887 lung Gene CTLA4, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI