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Gene CSTATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
168 supporting clones for gene CSTA back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AW269920 pooled .a 1 to 525 525 to 1 A12T tiling clone,   525/525
(100 %)
2 diff
(99.7 %id)
NM_005213.3   .a 1 to 825 1 to 825 exact RefSeq, AAA   825/825
(100 %)
0 diff
(100 %id)
CD520285 pooled .a 78 to 529 1 to 452 exact     452/926
(48 %)
6 diff
(99.4 %id)
BM955506 tonsil .a 79 to 432 1 to 354 K68E     354/354
(100 %)
7 diff
(98.1 %id)
BM955507 tonsil .a 79 to 432 1 to 354 N62D     354/354
(100 %)
8 diff
(97.8 %id)
BM955508 tonsil .a 79 to 432 1 to 354 I55V     354/354
(100 %)
7 diff
(98.1 %id)
BM955509 tonsil .a 79 to 432 1 to 354 exact     354/354
(100 %)
5 diff
(98.6 %id)
BM955511 tonsil .a 79 to 523 1 to 445 exact AAA   445/445
(100 %)
7 diff
(98.5 %id)
AV713368   .a 80 to 534 1 to 455 I2L E8D A9P K10T     455/483
(94 %)
30 diff
(93.8 %id)
BM955510 tonsil .a 80 to 522 1 to 443 P3L T13X Q17R AAA   443/443
(100 %)
6 diff
(98.7 %id)
BM955515 tonsil .a 81 to 369 7 to 295       289/295
(97 %)
0 diff
(100 %id)
AV713138   .a 82 to 526 1 to 445 Q42L AAA   445/445
(100 %)
1 diff
(99.8 %id)
CB126035 cervix, Uterine .a 84 to 522 1 to 438 N62D AAA   438/438
(100 %)
4 diff
(99.1 %id)
AI680589 Prostate .a 84 to 526 443 to 1 exact     443/443
(100 %)
1 diff
(99.8 %id)
BF183952 bone marrow, from chronic myelogenous leukemia .a 84 to 528 1 to 444 exact     444/705
(62 %)
4 diff
(99.5 %id)
BG497089 lung, mucoepidermoid carcinoma .a 84 to 511 1 to 432 L38S V57G R58T A59S G60R ...     432/755
(57 %)
11 diff
(98.6 %id)
AK291308 tongue .a 85 to 522 1 to 438 exact AAA   438/438
(100 %)
0 diff
(100 %id)
BC010379 Bone marrow, chronic myelogenous leukemia .a 85 to 521 5 to 441 exact available from MGC, AAA   437/437
(100 %)
1 diff
(99.8 %id)
CD698828 normal nasopharynx .a 85 to 529 23 to 468 exact     446/469
(95 %)
4 diff
(99.2 %id)
BP225964   .a 85 to 522 1 to 439 L27X Y43D AAA   439/439
(100 %)
8 diff
(98.2 %id)
X05978   .a 85 to 523 1 to 439 exact     439/439
(100 %)
1 diff
(99.8 %id)
DA761887 tongue .a 86 to 522 2 to 438 exact capped, AAA   437/437
(100 %)
0 diff
(100 %id)
DA763940 tongue .a 87 to 526 2 to 438 S7R E8P A9N K10P A12L ... capped, AAA   437/437
(100 %)
3 diff
(99.4 %id)
AW383936 head_neck .a 88 to 502 413 to 1 T96M     413/422
(97 %)
3 diff
(99.3 %id)
AW606301 head_neck .a 88 to 503 443 to 27 T96M     417/452
(92 %)
0 diff
(100 %id)
AV758507 bone marrow .a 90 to 522 69 to 502 T31N N32K E33* AAA   434/502
(86 %)
2 diff
(99.7 %id)
AV717631   .a 92 to 826 1 to 731 P25S Q26T L27A E28*     731/754
(96 %)
20 diff
(97.4 %id)
BG152695 well-differentiated invasive carcinoma,floor of mouth .a 93 to 518 1 to 426 H66R     426/426
(100 %)
5 diff
(98.9 %id)
CN483648 eye .a 96 to 528 1 to 433 exact     433/434
(99 %)
5 diff
(98.9 %id)
BG678796 skin, squamous cell carcinoma .a 96 to 522 1 to 422 I2L P3E G4A G5Y S7R ... AAA   422/422
(100 %)
6 diff
(98.6 %id)
BQ015859 lung, Metastatic Chondrosarcoma .a 96 to 522 445 to 19 exact AAA   427/435
(98 %)
1 diff
(99.8 %id)
W57890 heart .a 97 to 529 1 to 435 exact fully sequenced,   435/435
(100 %)
4 diff
(99.1 %id)
AA022873 heart .a 97 to 339 1 to 244   fully sequenced,   244/244
(100 %)
1 diff
(99.6 %id)
AA570193   .a 97 to 522 445 to 20 exact AAA   426/431
(98 %)
0 diff
(100 %id)
AI341447 pooled germ cell tumors .a 97 to 531 435 to 1 G4E     435/435
(100 %)
2 diff
(99.6 %id)
BX099127 multiple sclerosis lesions .a 101 to 522 1 to 421 exact AAA   421/421
(100 %)
2 diff
(99.6 %id)
T29211 ovary .a 102 to 403 1 to 302       302/302
(100 %)
6 diff
(98.1 %id)
BX397459 Placenta Cot 25-normalized .a 103 to 529 1 to 427 exact tiling clone, fully sequenced,   427/427
(100 %)
0 diff
(100 %id)
BF222535 Prostate .a 104 to 523 420 to 1 exact     420/428
(98 %)
1 diff
(99.8 %id)
DN998786 bone marrow .a 106 to 526 1 to 421 exact AAA   421/421
(100 %)
2 diff
(99.6 %id)
BE840752 prostate_normal .a 107 to 367 145 to 408       264/289
(91 %)
0 diff
(100 %id)
BE716963 head_neck .a 108 to 358 1 to 253       253/257
(98 %)
10 diff
(96.2 %id)
W35199 heart .a 108 to 525 1 to 421 F98L fully sequenced,   421/421
(100 %)
7 diff
(98.4 %id)
AI745621 Prostate .a 108 to 521 414 to 1 E15V E18K K22R K24Y E29D ...     414/414
(100 %)
23 diff
(94.5 %id)
BE840710 prostate_normal .a 117 to 470 1 to 354 P3L G4E G5A L6Y S7L ...     354/405
(87 %)
9 diff
(97.8 %id)
AW014844   .a 119 to 522 421 to 18 exact AAA   404/404
(100 %)
0 diff
(100 %id)
BE716875 head_neck .a 120 to 470 371 to 17 L6S Y43N Q46K V48D A49C ...     355/388
(91 %)
12 diff
(97.0 %id)
BE716903 head_neck .a 120 to 451 16 to 351 K30Q T31K N32Q E33M T34R ...     336/391
(85 %)
4 diff
(99.0 %id)
BE716959 head_neck .a 120 to 470 365 to 17 G50E T51Q N52I Y53T Y54T ...     349/380
(91 %)
1 diff
(99.8 %id)
BE716961 head_neck .a 120 to 470 11 to 359 I2S P3W G4S G5L S7*     349/383
(91 %)
2 diff
(99.5 %id)
BE716967 head_neck .a 120 to 489 379 to 14 V81D T83L G84D Y85T Q86R ...     366/394
(92 %)
0 diff
(100 %id)
BE716973 head_neck .a 120 to 468 351 to 4 K89I F98C     348/422
(82 %)
0 diff
(100 %id)
BE716974 head_neck .a 120 to 470 13 to 361 A9Q K10T P11R A12H T13S ...     349/377
(92 %)
2 diff
(99.5 %id)
BE716976 head_neck .a 120 to 470 24 to 372 K10N A12P T13L P14Q E15K ...     349/388
(89 %)
4 diff
(99.0 %id)
BE716977 head_neck .a 120 to 470 19 to 369 G4*     351/385
(91 %)
4 diff
(99.0 %id)
BE716979 head_neck .a 120 to 451 24 to 360 G5R S7I E8*     337/375
(89 %)
16 diff
(95.8 %id)
BE716996 head_neck .a 120 to 470 377 to 27 K89I N90Y     351/392
(89 %)
0 diff
(100 %id)
BE840736 prostate_normal .a 120 to 476 363 to 6 T31N N32K E33*     358/375
(95 %)
2 diff
(99.5 %id)
BE840737 prostate_normal .a 120 to 470 16 to 366 exact     351/373
(94 %)
1 diff
(99.8 %id)
BE840738 prostate_normal .a 120 to 441 8 to 329 exact     322/329
(97 %)
0 diff
(100 %id)
BE840741 prostate_normal .a 120 to 489 384 to 15 V69I K91R     370/384
(96 %)
0 diff
(100 %id)
BE840744 prostate_normal .a 120 to 451 349 to 13 T31N N32K E33*     337/350
(96 %)
2 diff
(99.5 %id)
BE840745 prostate_normal .a 120 to 391 11 to 282       272/282
(96 %)
0 diff
(100 %id)
BE840748 prostate_normal .a 120 to 479 20 to 379 exact     360/379
(94 %)
0 diff
(100 %id)
BE840750 prostate_normal .a 120 to 361 146 to 387       242/387
(62 %)
2 diff
(99.5 %id)
BE840753 prostate_normal .a 120 to 469 12 to 359 P3L G4E G5A L6Y S7L ...     348/359
(96 %)
1 diff
(99.8 %id)
BE840757 prostate_normal .a 120 to 470 14 to 363 K10N A12P T13L P14Q E15K ...     350/379
(92 %)
2 diff
(99.5 %id)
BQ351222 head_neck .a 120 to 469 34 to 386 E8A A9V K10Q P11I A12R ...     347/414
(83 %)
15 diff
(96.4 %id)
BE840743 prostate_normal .a 121 to 470 1 to 350 exact     350/366
(95 %)
2 diff
(99.5 %id)
BE840742 prostate_normal .a 122 to 423 1 to 302       302/302
(100 %)
3 diff
(99.1 %id)
BQ351277 head_neck .a 122 to 460 1 to 337 P3L G4V G5A L6I S7*     337/337
(100 %)
20 diff
(94.1 %id)
BE716869 head_neck .a 123 to 470 369 to 16 L6S K10E Y43N Q46T V47S ...     354/369
(95 %)
11 diff
(97.1 %id)
BE716920 head_neck .a 124 to 372 1 to 242       242/242
(100 %)
18 diff
(92.6 %id)
TI_149279126   .a 124 to 522 481 to 84 exact AAA   398/1054
(37 %)
2 diff
(99.9 %id)
BU678765 lung, Primary Lung Epithelial Cells .a 124 to 522 416 to 19 exact AAA   398/406
(98 %)
2 diff
(99.6 %id)
TI_149279208   .a 127 to 831 795 to 91 G5A L6V V23G L27R L38V tiling clone, AAA   705/710
(99 %)
6 diff
(99.2 %id)
BE716937 head_neck .a 130 to 470 1 to 340 G5V S7I E8*     340/356
(95 %)
7 diff
(98.1 %id)
CR456914   .a 130 to 425 1 to 296       296/297
(99 %)
2 diff
(99.4 %id)
CV027918 mixed .a 130 to 425 1 to 296       296/482
(61 %)
2 diff
(99.6 %id)
AI341609 pooled germ cell tumors .a 130 to 532 403 to 1 exact     403/403
(100 %)
1 diff
(99.8 %id)
AW275102 pooled .a 130 to 525 396 to 1 exact     396/396
(100 %)
1 diff
(99.8 %id)
BF939443 Prostate .a 130 to 522 393 to 1 P3L G4E S7F     393/393
(100 %)
4 diff
(99.0 %id)
BF437687 Prostate .a 130 to 522 393 to 1 exact     393/393
(100 %)
2 diff
(99.5 %id)
BE840747 prostate_normal .a 131 to 470 1 to 339       339/366
(92 %)
6 diff
(98.4 %id)
N46874 multiple sclerosis lesions .a 134 to 522 390 to 1       390/390
(100 %)
2 diff
(99.5 %id)
AI093212 heart .a 134 to 526 406 to 14   AAA   393/393
(100 %)
2 diff
(99.5 %id)
AI420214 Prostate .a 134 to 526 417 to 25   AAA   393/393
(100 %)
5 diff
(98.8 %id)
BE716953 head_neck .a 137 to 470 1 to 329       329/345
(95 %)
6 diff
(98.3 %id)
AI718231 aorta .a 137 to 522 401 to 16   AAA   386/386
(100 %)
6 diff
(98.5 %id)
AW299256 Kidney .a 137 to 525 390 to 2       389/390
(99 %)
0 diff
(100 %id)
BE645625 Prostate .a 137 to 523 386 to 1       386/386
(100 %)
9 diff
(97.7 %id)
BQ015850 lung, Metastatic Chondrosarcoma .a 138 to 526 402 to 15   AAA   388/396
(97 %)
1 diff
(99.8 %id)
AI912935 Kidney .a 140 to 526 387 to 1       387/387
(100 %)
1 diff
(99.8 %id)
AW467129 2 pooled tumors (clear cell type), Kidney .a 143 to 525 383 to 1       383/383
(100 %)
4 diff
(99.0 %id)
AA582872 larynx .a 144 to 521 377 to 1       377/377
(100 %)
22 diff
(94.2 %id)
BE716917 head_neck .a 145 to 456 1 to 310       310/310
(100 %)
12 diff
(96.2 %id)
BX507125 Liver .a 148 to 522 1 to 375   AAA   375/375
(100 %)
1 diff
(99.8 %id)
AI912811 Kidney .a 151 to 516 373 to 8       366/373
(98 %)
1 diff
(99.8 %id)
AA573610   .a 160 to 503 354 to 12       343/354
(96 %)
5 diff
(98.6 %id)
BE716958 head_neck .a 161 to 470 12 to 319       308/335
(91 %)
10 diff
(97.1 %id)
AW991432 breast_normal .a 170 to 378 209 to 1     Submitted on the opposite strand 209/209
(100 %)
3 diff
(98.6 %id)
AV711743   .a 177 to 523 91 to 437   AAA   347/437
(79 %)
1 diff
(99.8 %id)
BE716965 head_neck .a 186 to 470 16 to 300       285/316
(90 %)
2 diff
(99.4 %id)
BG196657   .a 186 to 522 1 to 334   AAA   334/334
(100 %)
15 diff
(95.6 %id)
BE716912 head_neck .a 187 to 470 319 to 35       285/328
(86 %)
4 diff
(98.8 %id)
AW238222 carcinoma in situ from retromolar trigone .a 188 to 526 15 to 353   AAA Submitted on the opposite strand 339/353
(96 %)
1 diff
(99.8 %id)
AW238412 carcinoma in situ from retromolar trigone .a 188 to 522 355 to 21   AAA   335/337
(99 %)
5 diff
(98.6 %id)
BG200270   .a 189 to 832 1 to 646   AAA   646/646
(100 %)
17 diff
(97.4 %id)
BG211709   .a 189 to 522 1 to 333   AAA   333/333
(100 %)
8 diff
(97.6 %id)
BG212254   .a 189 to 522 1 to 331   AAA   331/331
(100 %)
13 diff
(96.1 %id)
BG203372   .a 190 to 522 1 to 334   AAA   334/334
(100 %)
8 diff
(97.7 %id)
BG204377   .a 191 to 522 1 to 332   AAA   332/332
(100 %)
8 diff
(97.6 %id)
BG204883   .a 191 to 522 1 to 333   AAA   333/333
(100 %)
7 diff
(97.9 %id)
BG207524   .a 191 to 522 1 to 328   AAA   328/328
(100 %)
10 diff
(97.0 %id)
BG212253   .a 191 to 429 42 to 278       237/278
(85 %)
2 diff
(99.3 %id)
BG197177   .a 193 to 522 1 to 327   AAA   327/327
(100 %)
4 diff
(98.8 %id)
BG204884   .a 193 to 522 1 to 331   AAA   331/331
(100 %)
9 diff
(97.3 %id)
BG214909   .a 193 to 522 1 to 330   AAA   330/330
(100 %)
5 diff
(98.5 %id)
BG215461   .a 193 to 522 1 to 327   AAA   327/327
(100 %)
14 diff
(95.8 %id)
BE716921 head_neck .a 194 to 448 17 to 274       258/274
(94 %)
3 diff
(99.0 %id)
BE716931 head_neck .a 194 to 448 19 to 272       254/272
(93 %)
2 diff
(99.3 %id)
BE716952 head_neck .a 194 to 470 11 to 299       289/315
(91 %)
13 diff
(95.9 %id)
BF087931 head_neck .a 194 to 425 252 to 20       233/268
(86 %)
1 diff
(99.7 %id)
AW265472 normal squamous epithelium, floor of mouth .a 194 to 388 196 to 1       196/253
(77 %)
1 diff
(99.7 %id)
BG199752   .a 198 to 522 9 to 333   AAA   325/333
(97 %)
0 diff
(100 %id)
BG209684   .a 200 to 522 10 to 331   AAA   322/331
(97 %)
0 diff
(100 %id)
BG207034   .a 203 to 522 47 to 364   AAA   318/364
(87 %)
2 diff
(99.5 %id)
BG213814   .a 205 to 825 12 to 632   AAA   621/632
(98 %)
2 diff
(99.7 %id)
BG215462   .a 207 to 522 1 to 316   AAA   316/316
(100 %)
3 diff
(99.1 %id)
BG190932   .a 208 to 416 1 to 210       210/210
(100 %)
8 diff
(96.2 %id)
BG196656   .a 217 to 522 1 to 306   AAA   306/306
(100 %)
5 diff
(98.4 %id)
BG193131   .a 218 to 522 10 to 314   AAA   305/314
(97 %)
1 diff
(99.7 %id)
W23755 heart .a 231 to 525 295 to 1   fully sequenced,   295/295
(100 %)
4 diff
(98.7 %id)
W57891 heart .a 231 to 526 296 to 1   fully sequenced,   296/296
(100 %)
1 diff
(99.7 %id)
BE715171 head_neck .a 239 to 430 1 to 192       192/201
(95 %)
6 diff
(97.1 %id)
BI060331 uterus_tumor .a 239 to 510 1 to 272       272/272
(100 %)
5 diff
(98.2 %id)
AJ705787 bone marrow .a 242 to 522 3 to 283       281/283
(99 %)
1 diff
(99.7 %id)
AW379250 head_neck .a 249 to 478 1 to 233       233/243
(95 %)
13 diff
(94.7 %id)
AW379237 head_neck .a 252 to 478 14 to 240       227/250
(90 %)
5 diff
(98.0 %id)
AW605879 head_neck .a 257 to 478 25 to 244       220/254
(86 %)
6 diff
(97.7 %id)
W77844 heart .a 259 to 523 1 to 265       265/265
(100 %)
0 diff
(100 %id)
AW379147 head_neck .a 262 to 478 222 to 9       214/238
(89 %)
0 diff
(100 %id)
AW379168 head_neck .a 262 to 478 25 to 241       217/251
(86 %)
7 diff
(97.3 %id)
BE148658 head_neck .a 262 to 478 227 to 11     Submitted on the opposite strand 217/243
(89 %)
1 diff
(99.6 %id)
BI060317 uterus_tumor .a 275 to 510 1 to 238       238/238
(100 %)
9 diff
(96.3 %id)
AA583725 larynx .a 277 to 521 245 to 1       245/245
(100 %)
1 diff
(99.6 %id)
BI060318 uterus_tumor .a 279 to 510 1 to 235       235/235
(100 %)
9 diff
(96.2 %id)
BM969426 lung, Primary Lung Epithelial Cells .a 288 to 831 562 to 19   AAA   544/544
(100 %)
0 diff
(100 %id)
BI060315 uterus_tumor .a 294 to 510 1 to 217       217/217
(100 %)
7 diff
(96.8 %id)
AI669673 Prostate .a 296 to 520 225 to 1       225/225
(100 %)
5 diff
(97.8 %id)
AW265261 normal squamous epithelium, floor of mouth .a 301 to 526 249 to 24   AAA   226/226
(100 %)
1 diff
(99.6 %id)
BM955512 tonsil .a 302 to 432 1 to 131       131/131
(100 %)
0 diff
(100 %id)
BM955513 tonsil .a 302 to 525 1 to 224   AAA   224/224
(100 %)
1 diff
(99.6 %id)
BM955514 tonsil .a 302 to 525 1 to 224   AAA   224/224
(100 %)
1 diff
(99.6 %id)
FN065009 breast carcinoma .a 303 to 385 1 to 84       84/85
(98 %)
2 diff
(97.7 %id)
BG200271   .a 305 to 522 25 to 243   AAA   219/243
(90 %)
0 diff
(100 %id)
AA022874 heart .a 309 to 528 220 to 1   fully sequenced,   220/220
(100 %)
0 diff
(100 %id)
AV712943   .a 331 to 825 1 to 495   AAA   495/495
(100 %)
0 diff
(100 %id)
BE715106 head_neck .a 337 to 430 1 to 94       94/113
(83 %)
5 diff
(95.6 %id)
AW382452 head_neck .a 342 to 483 11 to 153       143/165
(86 %)
10 diff
(94.0 %id)
AA583844 larynx .a 343 to 527 185 to 1       185/185
(100 %)
0 diff
(100 %id)
BQ348246 head_neck .a 349 to 483 13 to 147       135/159
(84 %)
4 diff
(97.5 %id)
CB049338 Prostate .a 394 to 522 1 to 128   AAA   128/128
(100 %)
5 diff
(96.1 %id)
BX330266 Placenta Cot 25-normalized .a 398 to 525 128 to 1   fully sequenced,   128/128
(100 %)
0 diff
(100 %id)
C00962   .a 476 to 526 1 to 51       51/51
(100 %)
0 diff
(100 %id)
DB013332 esophageal, tumor tissue .b 1 to 563 2 to 567 Y35L G36X K37E L38N E39W ... tiling clone, capped   566/566
(100 %)
3 diff
(99.5 %id)
BG695875 skin .b 14 to 834 1 to 824 exact tiling clone,   824/825
(99 %)
8 diff
(99.1 %id)
BE716964 head_neck .b 35 to 285 265 to 15 T31N N32K E33*     251/280
(89 %)
0 diff
(100 %id)
DA433421 tongue, tumor tissue .c-u 1 to 797 2 to 803 exact tiling clone, capped   802/810
(99 %)
13 diff
(98.4 %id)
BX477597   .c-u 18 to 602 1 to 585 exact tiling clone,   585/585
(100 %)
0 diff
(100 %id)
AW079037 esophagus, squamous cell carcinoma .d-u 1 to 424 423 to 1 exact tiling clone,   423/423
(100 %)
1 diff
(99.8 %id)
AV716538   Gene CSTA, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DI