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Gene CST9LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
40 supporting clones for gene CST9L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC029656 Brain, adult medulla .a 1 to 956 1 to 956 exact tiling clone, available from MGC, AAA   956/956
(100 %)
0 diff
(100 %id)
NM_080610.2   .a 1 to 956 1 to 956 exact RefSeq, AAA   956/956
(100 %)
0 diff
(100 %id)
BI825261 brain, medulla .a 2 to 867 1 to 860 L10C S11P W12G A13R L14C ...     860/861
(99 %)
13 diff
(98.5 %id)
TI_57170146   .a 4 to 867 93 to 950 L10C S11P W12G A13R L14C ...     858/951
(90 %)
12 diff
(98.8 %id)
AK312112 testis .a 11 to 743 9 to 741 exact     733/733
(100 %)
1 diff
(99.9 %id)
DB062509 testis .a 11 to 554 9 to 552   capped   544/544
(100 %)
1 diff
(99.9 %id)
AY358615   .a 58 to 956 1 to 899 exact AAA   899/899
(100 %)
0 diff
(100 %id)
AA496078   .a 58 to 531 1 to 474       474/474
(100 %)
0 diff
(100 %id)
BX380551 Placenta Cot 25-normalized .a 285 to 959 1 to 675 exact     675/675
(100 %)
0 diff
(100 %id)
BX402568 Placenta Cot 25-normalized .a 285 to 959 1 to 675 exact     675/675
(100 %)
0 diff
(100 %id)
BP369653 testis .a 294 to 873 1 to 580 W6R S11X     580/580
(100 %)
6 diff
(99.0 %id)
TI_1948070810   .a 299 to 742 131 to 574       444/546
(81 %)
7 diff
(98.8 %id)
TI_1948071120   .a 299 to 742 130 to 573       444/670
(66 %)
7 diff
(99.0 %id)
TI_1948071431   .a 299 to 742 129 to 572       444/619
(71 %)
8 diff
(98.8 %id)
TI_1948071729   .a 299 to 742 127 to 570       444/666
(66 %)
7 diff
(99.0 %id)
CV030305 mixed .a 300 to 742 1 to 443       443/579
(76 %)
1 diff
(99.9 %id)
BX104050   .a 325 to 956 1 to 632   AAA   632/632
(100 %)
1 diff
(99.9 %id)
AW572915 pooled .a 390 to 959 570 to 1       570/570
(100 %)
0 diff
(100 %id)
BE500968 pooled germ cell tumors .a 414 to 956 543 to 1       543/543
(100 %)
0 diff
(100 %id)
BF056783 pooled germ cell tumors .a 432 to 956 526 to 1       526/526
(100 %)
6 diff
(98.9 %id)
AW418725 pooled .a 436 to 723 288 to 1       288/289
(99 %)
15 diff
(94.9 %id)
AI638675 pooled germ cell tumors .a 445 to 956 512 to 1       512/512
(100 %)
0 diff
(100 %id)
AI631708 pooled germ cell tumors .a 453 to 953 522 to 22   AAA   501/501
(100 %)
0 diff
(100 %id)
AI651682 pooled germ cell tumors .a 461 to 956 490 to 1       490/557
(87 %)
14 diff
(97.5 %id)
AW024125 pooled germ cell tumors .a 471 to 956 485 to 1       485/485
(100 %)
1 diff
(99.8 %id)
AW104268 pooled .a 513 to 958 449 to 1       449/449
(100 %)
4 diff
(99.2 %id)
BF056762 pooled germ cell tumors .a 513 to 723 211 to 2       210/211
(99 %)
12 diff
(94.4 %id)
AA812885   .a 524 to 959 439 to 4       436/441
(98 %)
0 diff
(100 %id)
AA934362 pooled .a 524 to 959 438 to 3       436/443
(98 %)
4 diff
(99.1 %id)
AA758532   .a 531 to 959 429 to 1       429/429
(100 %)
1 diff
(99.8 %id)
AA911102 pooled germ cell tumors .a 531 to 953 437 to 15   AAA   423/423
(100 %)
1 diff
(99.8 %id)
AA931770 pooled .a 538 to 723 186 to 1       186/193
(96 %)
2 diff
(99.0 %id)
BF223496 pooled germ cell tumors .a 552 to 956 423 to 14   AAA   410/412
(99 %)
21 diff
(95.0 %id)
AA968716 pooled germ cell tumors .a 580 to 956 377 to 1       377/377
(100 %)
1 diff
(99.8 %id)
AA973942 pooled germ cell tumors .a 670 to 956 287 to 1       287/287
(100 %)
1 diff
(99.7 %id)
AA608859   .a 671 to 959 293 to 5       289/293
(98 %)
0 diff
(100 %id)
FN123128 breast carcinoma .a 725 to 818 98 to 1     Submitted on the opposite strand 98/98
(100 %)
5 diff
(94.9 %id)
BE041425 pooled .a 747 to 960 219 to 6       214/221
(96 %)
0 diff
(100 %id)
FN141674 breast carcinoma .a 820 to 869 49 to 1     Submitted on the opposite strand 49/50
(98 %)
1 diff
(98.0 %id)
AA513329 breast Gene CST9L, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes DC