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Gene CSRP2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
200 supporting clones for gene CSRP2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BM477673 leiomyosarcoma, uterus .a 1 to 887 1 to 895 G213S I215S Y216I C217V G219D ... tiling clone,   895/1076
(83 %)
24 diff
(97.8 %id)
CR598239 fetal brain .b 1 to 922 1 to 922 exact tiling clone,   922/922
(100 %)
0 diff
(100 %id)
BX461295 brain, fetal brain .b 28 to 436 30 to 437   fully sequenced,   408/437
(93 %)
6 diff
(98.7 %id)
CD688265 normal nasopharynx .b 37 to 574 26 to 563       538/563
(95 %)
7 diff
(98.8 %id)
FE192627   .b 38 to 397 1 to 361       361/361
(100 %)
4 diff
(98.9 %id)
AI878918 brain, frontal lobe .b 39 to 545 29 to 535       507/535
(94 %)
6 diff
(98.9 %id)
BU943789 mixed (pool of 40 RNAs) .b 39 to 799 1 to 753       753/833
(90 %)
16 diff
(98.1 %id)
CD357287 Blood vessels - aorta, basilar and artery .b 40 to 742 1 to 715       715/833
(85 %)
37 diff
(95.6 %id)
AW160418 brain, frontal lobe .b 41 to 552 1 to 512   fully sequenced,   512/512
(100 %)
3 diff
(99.5 %id)
CB963576 Blood vessels - aorta, basilar and artery .b 41 to 651 1 to 611       611/615
(99 %)
2 diff
(99.7 %id)
DW466376 Liver .b 42 to 378 16 to 352       337/352
(95 %)
11 diff
(96.9 %id)
DB465712 hippocampus .b 42 to 477 1 to 438       438/438
(100 %)
9 diff
(98.0 %id)
NM_001321.1   .b 42 to 942 1 to 901   RefSeq,   901/901
(100 %)
0 diff
(100 %id)
DN994922 brain, whole brain .b 42 to 656 7 to 621       615/621
(99 %)
6 diff
(99.1 %id)
BP372219 umbilical cord .b 42 to 623 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BF698237 brain, primitive neuroectoderm .b 43 to 795 1 to 755       755/941
(80 %)
62 diff
(93.5 %id)
BG535578 lung .b 43 to 860 1 to 817       817/817
(100 %)
30 diff
(96.4 %id)
BQ067913 brain .b 43 to 943 1 to 907       907/1045
(86 %)
30 diff
(97.2 %id)
BQ084366 stomach .b 44 to 494 1 to 451       451/451
(100 %)
1 diff
(99.8 %id)
CD249500 embryonic stem cells, WA01, passage 38 .b 45 to 861 21 to 842       822/874
(94 %)
15 diff
(98.3 %id)
DB469608 hippocampus .b 46 to 489 1 to 444       444/444
(100 %)
3 diff
(99.4 %id)
TI_45236059   .b 46 to 941 52 to 948   fully sequenced, AAA   897/948
(94 %)
25 diff
(97.4 %id)
AW161336 brain, frontal lobe .b 50 to 454 1 to 405       405/405
(100 %)
0 diff
(100 %id)
N86316   .b 51 to 389 1 to 325       325/328
(99 %)
23 diff
(93.0 %id)
AW162776 brain, frontal lobe .b 55 to 513 1 to 460   fully sequenced,   460/460
(100 %)
3 diff
(99.4 %id)
AW163391 brain, frontal lobe .b 55 to 495 1 to 442   fully sequenced,   442/442
(100 %)
3 diff
(99.4 %id)
BM019832 astrocytoma grade IV, cell line, brain .b 55 to 630 1 to 576       576/580
(99 %)
3 diff
(99.5 %id)
TI_59390529   .b 56 to 630 98 to 672       575/579
(99 %)
2 diff
(99.7 %id)
AA375862 lung .b 57 to 387 1 to 332       332/332
(100 %)
1 diff
(99.7 %id)
AW160348 brain, frontal lobe .b 57 to 472 1 to 416   fully sequenced,   416/416
(100 %)
3 diff
(99.3 %id)
AW957703   .b 58 to 691 1 to 634       634/634
(100 %)
0 diff
(100 %id)
AI929052 brain, frontal lobe .b 60 to 573 1 to 514       514/514
(100 %)
2 diff
(99.7 %id)
BI084290 epidermoid carcinoma, cell line, salivary gland .b 62 to 788 1 to 737       737/741
(99 %)
21 diff
(97.2 %id)
BF686438 leiomyosarcoma cell line, uterus .b 63 to 867 1 to 787       787/958
(82 %)
17 diff
(98.3 %id)
BF974051 leiomyosarcoma cell line, uterus .b 63 to 807 1 to 745       745/911
(81 %)
27 diff
(97.1 %id)
BM020349 astrocytoma grade IV, cell line, brain .b 63 to 943 1 to 882       882/931
(94 %)
31 diff
(96.7 %id)
BF307340 muscle, rhabdomyosarcoma .b 64 to 841 1 to 762       767/782
(98 %)
34 diff
(95.7 %id)
BI517866 pooled colon, kidney, stomach .b 64 to 941 1 to 880   fully sequenced, AAA   880/880
(100 %)
19 diff
(97.9 %id)
BM547646 brain, hippocampus .b 64 to 942 1 to 879   AAA   879/879
(100 %)
9 diff
(99.0 %id)
TI_59391134   .b 64 to 943 100 to 980       881/930
(94 %)
30 diff
(96.8 %id)
CV574993 cornea, eye .b 64 to 672 1 to 609       609/609
(100 %)
0 diff
(100 %id)
BX398651 Placenta Cot 25-normalized .b 65 to 943 1 to 882   fully sequenced,   882/882
(100 %)
9 diff
(99.0 %id)
BF683526 leiomyosarcoma cell line, uterus .b 65 to 936 1 to 876       878/910
(96 %)
42 diff
(95.4 %id)
BF973148 leiomyosarcoma cell line, uterus .b 65 to 766 1 to 758       505/1077
(46 %)
29 diff
(97.4 %id)
BQ646456 hepatocellular carcinoma, cell line, Liver .b 66 to 943 1 to 875       875/881
(99 %)
7 diff
(99.3 %id)
CD580514 brain .b 66 to 942 1 to 879   AAA   879/879
(100 %)
9 diff
(99.0 %id)
BQ427526 leiomyosarcoma, uterus .b 67 to 893 1 to 831       831/832
(99 %)
6 diff
(99.3 %id)
R36832   .b 68 to 239 1 to 171       171/171
(100 %)
1 diff
(99.5 %id)
U57646   .b 68 to 943 1 to 875       875/883
(99 %)
2 diff
(99.8 %id)
AA213588   .b 69 to 474 1 to 412       412/412
(100 %)
15 diff
(96.4 %id)
BX111896 senescent fibroblast .b 72 to 717 1 to 646       646/646
(100 %)
1 diff
(99.9 %id)
W44461 senescent fibroblast .b 72 to 479 16 to 430   fully sequenced,   415/430
(96 %)
15 diff
(96.6 %id)
BC000992 Placenta, choriocarcinoma .b 73 to 942 1 to 870   tiling clone, available from MGC, AAA   870/870
(100 %)
0 diff
(100 %id)
BQ225537 leiomyosarcoma, uterus .b 75 to 833 1 to 765       765/887
(86 %)
7 diff
(99.3 %id)
W40196 lung .b 77 to 518 1 to 442       442/443
(99 %)
4 diff
(99.1 %id)
CV571801 cornea, eye .b 77 to 661 1 to 585       585/585
(100 %)
0 diff
(100 %id)
C15430   .b 80 to 484 1 to 399       399/399
(100 %)
7 diff
(98.3 %id)
C15564   .b 80 to 339 1 to 258       258/258
(100 %)
5 diff
(98.1 %id)
CA394878 eye, RPE/choroid .b 81 to 563 20 to 502       483/502
(96 %)
11 diff
(97.9 %id)
BG723878 testis .b 81 to 794 1 to 713       711/713
(99 %)
10 diff
(98.6 %id)
CX754831 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 83 to 831 1 to 749     Submitted on the opposite strand 749/749
(100 %)
1 diff
(99.9 %id)
DB441783 testis .b 88 to 481 1 to 395       395/399
(98 %)
4 diff
(99.0 %id)
BG340239 leiomyosarcoma cell line, uterus .b 88 to 915 1 to 816       816/881
(92 %)
32 diff
(96.4 %id)
BE535935 cervix .b 93 to 766 1 to 677       677/677
(100 %)
7 diff
(99.0 %id)
CD580481 brain .b 108 to 942 1 to 835   AAA   835/835
(100 %)
0 diff
(100 %id)
CN408331 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 118 to 769 1 to 655       657/655
(100 %)
8 diff
(98.8 %id)
TI_1948099103   .b 118 to 633 127 to 642       518/538
(96 %)
7 diff
(98.7 %id)
TI_1948099248   .b 119 to 436 121 to 438   fully sequenced,   320/343
(93 %)
10 diff
(97.1 %id)
TI_1948099407   .b 119 to 436 124 to 441   fully sequenced, AAA   320/342
(93 %)
6 diff
(98.3 %id)
TI_1948099561.
matches multiple genes
  .b 119 to 600 122 to 603     also hits gene CSRP2P 483/504
(95 %)
6 diff
(98.9 %id)
CN315079 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 120 to 485 30 to 397       370/460
(80 %)
25 diff
(94.6 %id)
BT019913   .b 124 to 705 1 to 581       581/582
(99 %)
3 diff
(99.5 %id)
CV023874 mixed .b 124 to 705 1 to 581       581/619
(93 %)
2 diff
(99.7 %id)
TI_149294665   .b 124 to 942 893 to 81   AAA   813/977
(83 %)
7 diff
(99.3 %id)
U46006 aorta .b 124 to 782 1 to 658       658/741
(88 %)
5 diff
(99.4 %id)
BI838055 pooled pancreas and spleen .b 125 to 905 79 to 873       795/873
(91 %)
26 diff
(97.1 %id)
TI_57165443   .b 125 to 905 155 to 949       795/949
(83 %)
26 diff
(97.3 %id)
BM697884 eye, fetal eyes .b 144 to 654 1 to 513       513/513
(100 %)
2 diff
(99.7 %id)
BM802624 eye, retinoblastoma .b 146 to 943 1 to 799       799/822
(97 %)
6 diff
(99.3 %id)
CB991162 placenta, pre-eclamptic placenta .b 149 to 901 22 to 774       753/774
(97 %)
5 diff
(99.4 %id)
BU683308 lung .b 179 to 942 781 to 19   AAA   763/763
(100 %)
2 diff
(99.8 %id)
EL948079 eyeball .b 192 to 709 1 to 518       518/518
(100 %)
3 diff
(99.5 %id)
BP423744 small intestine .b 199 to 568 380 to 11       370/380
(97 %)
1 diff
(99.8 %id)
AA213598   .b 225 to 339 1 to 115       115/115
(100 %)
2 diff
(98.3 %id)
BG216707   .b 238 to 915 713 to 35     Submitted on the opposite strand 679/865
(78 %)
22 diff
(97.5 %id)
BU622452 cell lines, Chondrosarcoma .b 241 to 942 720 to 19   AAA   702/710
(98 %)
2 diff
(99.8 %id)
CD580289 brain .b 246 to 943 1 to 694       694/699
(99 %)
7 diff
(99.0 %id)
CN408328 embryonic stem cells, cell lines H1, H7, andH9 .b 262 to 638 1 to 377       377/377
(100 %)
5 diff
(98.7 %id)
BP391887 pancreatic islet .b 281 to 780 500 to 1       500/500
(100 %)
1 diff
(99.8 %id)
C01775   .b 289 to 614 1 to 328       328/328
(100 %)
3 diff
(99.1 %id)
W40142 lung .b 290 to 354 1 to 66       66/66
(100 %)
1 diff
(98.5 %id)
BU623688 cell lines, Enchondroma .b 309 to 942 652 to 19   AAA   634/634
(100 %)
0 diff
(100 %id)
BG029662 breast, mammary adenocarcinoma, cell line .b 312 to 943 1 to 629       629/646
(97 %)
5 diff
(99.3 %id)
AA055757 heart .b 321 to 660 1 to 345   fully sequenced,   345/345
(100 %)
6 diff
(98.3 %id)
CR611980 fetal brain .b 334 to 943 1 to 610       610/610
(100 %)
0 diff
(100 %id)
BX407777 brain, fetal brain .b 334 to 888 580 to 26       555/580
(95 %)
11 diff
(98.2 %id)
BX407778 brain, fetal brain .b 334 to 943 1 to 610       610/610
(100 %)
0 diff
(100 %id)
BX410740 brain, fetal brain .b 334 to 930 597 to 1       597/597
(100 %)
4 diff
(99.4 %id)
BX410741 brain, fetal brain .b 334 to 943 1 to 610       610/610
(100 %)
1 diff
(99.9 %id)
BX410742 brain, fetal brain .b 334 to 942 1 to 613       613/613
(100 %)
14 diff
(97.8 %id)
BX461098 brain, fetal brain .b 334 to 943 1 to 610       610/610
(100 %)
0 diff
(100 %id)
BX455369 brain, fetal brain .b 338 to 938 608 to 1       608/612
(99 %)
27 diff
(95.6 %id)
EL952954 eyeball .b 340 to 902 1 to 562       562/562
(100 %)
4 diff
(99.3 %id)
W60960 heart .b 345 to 567 1 to 224   fully sequenced,   224/224
(100 %)
9 diff
(96.0 %id)
BG938565 Bone, Hip .b 349 to 892 551 to 8       544/568
(95 %)
0 diff
(100 %id)
BX442050 brain, fetal brain .b 375 to 922 549 to 1   fully sequenced,   549/549
(100 %)
18 diff
(96.8 %id)
BX398650 Placenta Cot 25-normalized .b 375 to 856 547 to 56   fully sequenced,   492/547
(89 %)
10 diff
(98.2 %id)
BI518153 pooled colon, kidney, stomach .b 375 to 893 518 to 1   fully sequenced,   518/518
(100 %)
5 diff
(99.1 %id)
TI_45236060   .b 375 to 893 518 to 1   fully sequenced,   518/518
(100 %)
5 diff
(99.1 %id)
TI_1948099249   .b 375 to 705 457 to 127   fully sequenced,   331/457
(72 %)
0 diff
(100 %id)
TI_1948099408   .b 375 to 705 455 to 125   fully sequenced,   331/455
(72 %)
0 diff
(100 %id)
CV572978 cornea, eye .b 378 to 942 1 to 565   AAA   565/565
(100 %)
0 diff
(100 %id)
BE764222 nervous_tumor .b 386 to 695 1 to 311       311/320
(97 %)
4 diff
(98.8 %id)
BE764243 nervous_tumor .b 386 to 689 1 to 305       305/305
(100 %)
2 diff
(99.4 %id)
AJ711593 heart .b 406 to 938 554 to 21     Submitted on the opposite strand 534/554
(96 %)
0 diff
(100 %id)
BQ007299 placenta .b 411 to 942 549 to 18   AAA   532/532
(100 %)
3 diff
(99.5 %id)
AW665847 pooled .b 426 to 943 523 to 6       518/523
(99 %)
0 diff
(100 %id)
BE349465 malignant melanoma, metastatic to lymphnode, skin .b 428 to 942 515 to 1       515/515
(100 %)
0 diff
(100 %id)
EL948225 eyeball .b 429 to 942 45 to 558   AAA   514/558
(92 %)
7 diff
(98.8 %id)
CD108127 brain, Pituitary .b 435 to 943 1 to 509       509/595
(85 %)
1 diff
(99.9 %id)
AA621365   .b 440 to 943 509 to 5       505/509
(99 %)
0 diff
(100 %id)
AJ711742 heart .b 441 to 941 548 to 46   AAA Submitted on the opposite strand 503/503
(100 %)
16 diff
(96.9 %id)
CD676713 eye, Trabecular meshwork .b 444 to 942 1 to 499   AAA   499/499
(100 %)
0 diff
(100 %id)
AI018186 pooled .b 448 to 943 498 to 3       496/498
(99 %)
0 diff
(100 %id)
W44422 senescent fibroblast .b 449 to 943 507 to 7   fully sequenced,   501/507
(98 %)
4 diff
(99.3 %id)
AA553531 Schwannoma tumor .b 452 to 943 492 to 1       492/492
(100 %)
0 diff
(100 %id)
DB506709 testis .b 455 to 942 1 to 492     Submitted on the opposite strand 492/492
(100 %)
20 diff
(96.0 %id)
AI929740 brain, frontal lobe .b 458 to 943 493 to 8       486/493
(98 %)
0 diff
(100 %id)
BM987325 mixed .b 459 to 942 502 to 19   AAA   484/484
(100 %)
0 diff
(100 %id)
AI143784 heart .b 460 to 942 483 to 1       483/483
(100 %)
3 diff
(99.4 %id)
AW105182 pooled .b 464 to 943 488 to 9       480/488
(98 %)
0 diff
(100 %id)
AW162313 brain, frontal lobe .b 464 to 943 488 to 9   fully sequenced,   480/488
(98 %)
0 diff
(100 %id)
AW511294 pooled .b 464 to 943 482 to 3       480/482
(99 %)
6 diff
(98.8 %id)
BE856208 brain, glioblastoma (pooled) .b 464 to 686 223 to 1       223/223
(100 %)
2 diff
(99.2 %id)
BG054702 brain, glioblastoma (pooled) .b 464 to 686 223 to 1       223/223
(100 %)
1 diff
(99.6 %id)
AW157335 brain, frontal lobe .b 465 to 686 222 to 1   fully sequenced,   222/222
(100 %)
2 diff
(99.1 %id)
BF593597 pooled germ cell tumors .b 466 to 682 1 to 217     Submitted on the opposite strand 217/217
(100 %)
3 diff
(98.7 %id)
AW161794 brain, frontal lobe .b 467 to 943 485 to 9       477/485
(98 %)
2 diff
(99.6 %id)
AA213381   .b 468 to 943 481 to 6       476/481
(98 %)
2 diff
(99.6 %id)
AA955032 Kidney, kidney tumor .b 471 to 942 472 to 1       472/472
(100 %)
0 diff
(100 %id)
AA035702 heart .b 473 to 926 1 to 479   fully sequenced,   479/479
(100 %)
25 diff
(94.8 %id)
AI803707 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 474 to 942 469 to 1       469/479
(97 %)
1 diff
(99.8 %id)
AW162668 brain, frontal lobe .b 483 to 943 468 to 8   fully sequenced,   461/468
(98 %)
2 diff
(99.6 %id)
AI051653 brain, glioblastoma (pooled) .b 486 to 942 470 to 14   AAA   457/457
(100 %)
0 diff
(100 %id)
AI371769 brain, glioblastoma (pooled) .b 487 to 942 456 to 1       456/456
(100 %)
4 diff
(99.2 %id)
AI401334 brain, glioblastoma (pooled) .b 489 to 943 458 to 4       455/458
(99 %)
0 diff
(100 %id)
AA973873 pooled germ cell tumors .b 498 to 942 444 to 1       444/444
(100 %)
1 diff
(99.8 %id)
BF108821 pooled .b 498 to 943 450 to 5       446/450
(99 %)
0 diff
(100 %id)
AA758098   .b 503 to 942 459 to 21   AAA   439/439
(100 %)
9 diff
(98.0 %id)
AA213374   .b 503 to 690 188 to 1       188/188
(100 %)
0 diff
(100 %id)
AI016168   .b 503 to 943 444 to 5       440/444
(99 %)
0 diff
(100 %id)
AI239651 pooled .b 503 to 943 442 to 1       442/442
(100 %)
1 diff
(99.8 %id)
CD677913 eye, Trabecular meshwork .b 504 to 942 1 to 439   AAA   439/439
(100 %)
0 diff
(100 %id)
W63677 heart .b 505 to 942 436 to 1   fully sequenced,   436/436
(100 %)
0 diff
(100 %id)
AW162034 brain, frontal lobe .b 505 to 942 449 to 12   fully sequenced, AAA   438/438
(100 %)
0 diff
(100 %id)
DB537214 hippocampus .b 512 to 942 1 to 431     Submitted on the opposite strand 431/431
(100 %)
4 diff
(99.1 %id)
AA906406 pooled .b 512 to 943 435 to 4       432/435
(99 %)
0 diff
(100 %id)
AI384066 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 549 to 943 395 to 1       395/395
(100 %)
0 diff
(100 %id)
W52188 senescent fibroblast .b 550 to 942 393 to 1       393/393
(100 %)
0 diff
(100 %id)
AI554102 pooled .b 550 to 943 399 to 6       394/399
(98 %)
0 diff
(100 %id)
BF734175 amnion_normal .b 565 to 802 1 to 240       238/240
(99 %)
14 diff
(94.2 %id)
AA890705 parathyroid gland, parathyroid tumor .b 575 to 943 375 to 8       368/375
(98 %)
0 diff
(100 %id)
BG152642 brain, glioblastoma without EGFR amplification .b 575 to 943 369 to 1       369/369
(100 %)
2 diff
(99.5 %id)
BX483580   .b 582 to 942 1 to 361   AAA   361/361
(100 %)
2 diff
(99.5 %id)
AA063572 heart .b 599 to 942 351 to 1   fully sequenced,   351/351
(100 %)
3 diff
(99.2 %id)
AA055758 heart .b 599 to 942 347 to 1   fully sequenced,   347/347
(100 %)
1 diff
(99.8 %id)
AA706115 uterus .b 614 to 942 327 to 1       327/327
(100 %)
4 diff
(98.8 %id)
AI184372 placenta .b 617 to 943 331 to 5       327/331
(98 %)
0 diff
(100 %id)
C14731   .b 619 to 942 323 to 1       323/323
(100 %)
1 diff
(99.7 %id)
DB532487 hippocampus .b 622 to 942 4 to 324   AAA Submitted on the opposite strand 321/324
(99 %)
0 diff
(100 %id)
AI433389 lymph node, lymphoma, follicular mixed small and largecell .b 628 to 943 316 to 1       316/316
(100 %)
0 diff
(100 %id)
AA745831 2 pooled tumors (clear cell type), Kidney .b 636 to 942 317 to 13   AAA   305/305
(100 %)
3 diff
(99.1 %id)
AA583836 larynx .b 653 to 942 290 to 1       290/290
(100 %)
0 diff
(100 %id)
AI537636 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 653 to 943 291 to 1       291/291
(100 %)
0 diff
(100 %id)
T59334 ovary .b 658 to 943 294 to 4       291/344
(84 %)
0 diff
(100 %id)
CD676956 eye, Trabecular meshwork .b 674 to 942 1 to 269   AAA   269/269
(100 %)
0 diff
(100 %id)
BM667061 eye, fetal eyes .b 703 to 942 258 to 19   AAA   240/240
(100 %)
6 diff
(97.5 %id)
AI752704 Bone, Hip .b 725 to 913 196 to 8       189/196
(96 %)
0 diff
(100 %id)
AI368461.
matches multiple genes
brain, glioblastoma (pooled) .b 831 to 942 112 to 1   tiling clone, also hits gene tawbawby 112/112
(100 %)
0 diff
(100 %id)
DW449842 Liver .c 1 to 184 16 to 201       186/201
(92 %)
8 diff
(96.1 %id)
AI929315 brain, frontal lobe .c 1 to 486 1 to 486   tiling clone, fully sequenced,   486/486
(100 %)
1 diff
(99.8 %id)
BP372565 umbilical cord .c 1 to 583 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
CB961771 placenta, pre-eclamptic placenta .c 2 to 748 27 to 779 E160X tiling clone,   753/782
(96 %)
13 diff
(98.4 %id)
CN408330 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 9 to 605 1 to 597       597/597
(100 %)
3 diff
(99.5 %id)
N39473 placenta .c 27 to 443 1 to 414       414/414
(100 %)
7 diff
(98.4 %id)
CN408329 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 32 to 440 1 to 409       409/409
(100 %)
0 diff
(100 %id)
AI929250 brain, frontal lobe .c 439 to 877 445 to 7   tiling clone, fully sequenced,   439/445
(98 %)
1 diff
(99.8 %id)
N26294 placenta .c 563 to 877 321 to 5       317/351
(90 %)
0 diff
(100 %id)
BX477752   .d 1 to 599 1 to 599   tiling clone,   599/599
(100 %)
1 diff
(99.9 %id)
T48347 fetal spleen, Spleen .d 18 to 294 1 to 288   fully sequenced,   288/288
(100 %)
8 diff
(97.3 %id)
BY796039 eye .d 35 to 647 1 to 613 exact     613/613
(100 %)
0 diff
(100 %id)
T48348 fetal spleen, Spleen .d 264 to 666 410 to 1   tiling clone, fully sequenced,   410/410
(100 %)
10 diff
(97.6 %id)
CX872151 embryonic stem .e-u 1 to 773 1 to 773 exact tiling clone,   773/773
(100 %)
0 diff
(100 %id)
BP389528 pancreatic islet .e-u 442 to 908 1 to 468     Submitted on the opposite strand 468/468
(100 %)
2 diff
(99.6 %id)
CN266269 embryonic stem cells, cell lines H1, H7, andH9 .e-u 485 to 1165 23 to 705   tiling clone,   683/705
(96 %)
6 diff
(99.2 %id)
CV367834 colon_normal .e-u 545 to 808 281 to 20     Submitted on the opposite strand 262/281
(93 %)
0 diff
(100 %id)
BF432851 carcinoid, lung .e-u 1119 to 1658 551 to 12   tiling clone, AAA   540/540
(100 %)
0 diff
(100 %id)
CB409464 maxilla, pooled .e-u 1160 to 1658 1 to 499   AAA   499/499
(100 %)
0 diff
(100 %id)
AW072648 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .e-u 1161 to 1658 498 to 1       498/498
(100 %)
0 diff
(100 %id)
CV572360 cornea, eye .f 1 to 628 1 to 628 exact tiling clone,   628/628
(100 %)
2 diff
(99.7 %id)
CN412766 embryonic stem cells, cell lines H1, H7, andH9 .g 1 to 194 1 to 193 S12* tiling clone,   193/193
(100 %)
4 diff
(98.0 %id)
AL709621 human skeletal muscle .h 1 to 538 1 to 537   tiling clone,   537/537
(100 %)
3 diff
(99.5 %id)
AB209321 brain .h 135 to 5212 1 to 5074 exact tiling clone,   5074/5074
(100 %)
12 diff
(99.8 %id)
AL705489 human skeletal muscle .h 550 to 1090 541 to 1   tiling clone, Submitted on the opposite strand 541/541
(100 %)
0 diff
(100 %id)
AK307205 brain .h 591 to 1663 1 to 1073   tiling clone,   1073/1073
(100 %)
3 diff
(99.8 %id)
DA510047 brain .h 592 to 1154 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DB176194 kidney, tumor tissue .h 662 to 1220 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
CB963059 Blood vessels - aorta, basilar and artery .h 1913 to 2301 1 to 389       389/397
(97 %)
4 diff
(99.0 %id)
CD251878 testis .h 2078 to 2863 1 to 791   tiling clone,   791/820
(96 %)
10 diff
(98.8 %id)
DA852973 placenta .h 2093 to 2647 2 to 557   capped   556/556
(100 %)
5 diff
(99.2 %id)
AI860868 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h 2826 to 3196 1 to 371   tiling clone, Submitted on the opposite strand 371/371
(100 %)
0 diff
(100 %id)
BE150380 head_neck .h 3098 to 3509 1 to 410       410/410
(100 %)
22 diff
(94.7 %id)
C15989   .h 3670 to 4061 1 to 392       392/393
(99 %)
1 diff
(99.8 %id)
CV572655 cornea, eye .h 3689 to 4300 1 to 612   tiling clone,   612/612
(100 %)
0 diff
(100 %id)
DA769047 brain .i-u 1 to 534 2 to 535 exact tiling clone, capped   534/534
(100 %)
0 diff
(100 %id)
BM955862 tonsil .i-u 301 to 806 1 to 497   tiling clone,   497/497
(100 %)
19 diff
(96.2 %id)
TI_1948099562.
matches multiple genes
  P.a-u 1 to 462 596 to 127 N16D Y24C T31P A46D W49E ... tiling clone, also hits gene CSRP2P 470/500
(94 %)
0 diff
(100 %id)
AY349166   Gene CSRP2, variant not shown         Suspected internal deletion, this clone was ignored    
D60082   Gene CSRP2, variant not shown         This clone was ignored    
BE047590 brain, tumor, 5 pooled (see description) Gene CSRP2, variant not shown         This clone was ignored    
AI863230 brain, tumor, 5 pooled (see description) Gene CSRP2, variant not shown         This clone was ignored    
AI878810 brain, frontal lobe Gene CSRP2, variant not shown         Suspected internal deletion, this clone was ignored    
AI879373 brain, frontal lobe Gene CSRP2, variant not shown         Suspected internal deletion, this clone was ignored    
BM677029 eye, fetal eye Gene CSRP2, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f, .g, .h, .i-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI