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Gene CSN1S1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
30 supporting clones for gene CSN1S1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001890.1   .a 1 to 981 1 to 981 exact RefSeq,   981/981
(100 %)
0 diff
(100 %id)
X78416 mammary gland .a 1 to 981 1 to 981 exact tiling clone,   981/981
(100 %)
0 diff
(100 %id)
BC128227 PCR rescued clones .a 12 to 836 1 to 825 exact     825/825
(100 %)
0 diff
(100 %id)
BC128228 PCR rescued clones .a 12 to 836 1 to 825 A117V     825/825
(100 %)
1 diff
(99.9 %id)
U23157 mammary gland .a 22 to 982 1 to 962 exact tiling clone,   962/962
(100 %)
2 diff
(99.8 %id)
BG181959   .a 37 to 770 1 to 725 A11G V12G L14G A15C R16Q ...     665/804
(82 %)
34 diff
(95.8 %id)
BG205233   .a 38 to 853 1 to 811 A117V E174X     811/812
(99 %)
21 diff
(97.5 %id)
BG206324   .a 39 to 832 1 to 779 A117V P160S     779/786
(99 %)
25 diff
(96.9 %id)
BG217390   .a 40 to 569 1 to 535       535/837
(63 %)
14 diff
(98.4 %id)
X98084   .a 73 to 926 1 to 854       854/854
(100 %)
1 diff
(99.9 %id)
BG221380   .a 286 to 971 700 to 13     Submitted on the opposite strand 688/857
(80 %)
14 diff
(98.4 %id)
BG187562   .a 292 to 936 38 to 677   AAA   640/677
(94 %)
20 diff
(97.1 %id)
BG182474   .a 293 to 971 689 to 11     Submitted on the opposite strand 670/689
(97 %)
12 diff
(98.3 %id)
BG199032   .a 352 to 971 634 to 14     Submitted on the opposite strand 621/940
(66 %)
18 diff
(98.1 %id)
BG211013   .a 409 to 971 571 to 11     Submitted on the opposite strand 561/874
(64 %)
3 diff
(99.7 %id)
BG200584   .a 446 to 967 74 to 596       523/615
(85 %)
41 diff
(93.4 %id)
BG183518   .a 452 to 971 529 to 11     Submitted on the opposite strand 519/529
(98 %)
0 diff
(100 %id)
BG197475   .a 452 to 971 529 to 11     Submitted on the opposite strand 519/529
(98 %)
1 diff
(99.9 %id)
BG217919   .a 452 to 968 528 to 13     Submitted on the opposite strand 516/528
(97 %)
1 diff
(99.9 %id)
DQ064604   .b 1 to 533 1 to 533 P80S tiling clone,   533/534
(99 %)
3 diff
(99.5 %id)
NM_001025104.1   .c 1 to 954 1 to 954 exact RefSeq,   954/954
(100 %)
0 diff
(100 %id)
BG217918   .c 39 to 635 1 to 593 A108V S156F Y167M E168K N170I ... tiling clone,   593/593
(100 %)
8 diff
(98.7 %id)
BG181461   .c 210 to 941 746 to 14   tiling clone, Submitted on the opposite strand 725/811
(89 %)
18 diff
(97.8 %id)
BG199031   .c 290 to 506 1 to 217       217/217
(100 %)
2 diff
(99.1 %id)
BG187172   .d 1 to 253 1 to 253   tiling clone,   253/253
(100 %)
1 diff
(99.7 %id)
BG193471   .d 231 to 843 660 to 12   tiling clone, Submitted on the opposite strand 621/876
(70 %)
16 diff
(98.2 %id)
BG207337   .d 231 to 839 1 to 607   tiling clone,   607/613
(99 %)
10 diff
(98.4 %id)
BG219929   .e 1 to 591 604 to 15 R16G tiling clone, Submitted on the opposite strand 590/604
(97 %)
1 diff
(99.9 %id)
BG189869   Gene CSN1S1, variant not shown         Submitted on the opposite strand    
BG206325   Gene CSN1S1, variant not shown         Submitted on the opposite strand    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes I