To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene CRTAPTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
516 supporting clones for gene CRTAP back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_006371.4   .a 1 to 6649 2 to 6650 exact RefSeq, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 6650/6650
(100 %)
0 diff
(100 %id)
DA335701 hippocampus .a 1 to 593 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA336054 hippocampus .a 1 to 597 2 to 598   tiling clone, capped   597/597
(100 %)
0 diff
(100 %id)
DA598263   .a 9 to 566 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA295510 hippocampus .a 19 to 572 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA580253   .a 20 to 586 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA746633   .a 20 to 577 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB230533 trachea .a 20 to 607 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DB263361 uterus .a 20 to 590 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB292435 uterus .a 20 to 613 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
AK314719 placenta .a 21 to 1325 1 to 1305 exact     1305/1305
(100 %)
0 diff
(100 %id)
DA875083 Prostate .a 21 to 544 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
DA318841 hippocampus .a 22 to 582 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA125377 cerebellum .a 23 to 613 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA284003 corpus callosum .a 23 to 595 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA314736 hippocampus .a 23 to 579 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA579764   .a 23 to 569 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA749145   .a 23 to 586 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
AK075401 placenta .a 25 to 2035 1 to 2010 R212E A213Q V214C R215G A216H ...     2010/2010
(100 %)
4 diff
(99.9 %id)
DA724978   .a 26 to 608 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DB251681 uterus .a 26 to 562 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DB288818 uterus .a 26 to 599 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA225360 brain .a 28 to 581 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
TI_159677103   .a 28 to 912 51 to 925       875/1056
(82 %)
21 diff
(98.1 %id)
TI_57193240   .a 33 to 873 53 to 898       846/846
(100 %)
16 diff
(98.2 %id)
DA911018   .a 38 to 589 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA221719 brain .a 39 to 601 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BQ271400 Pancreas, Purified pancreatic islet .a 41 to 503 1 to 463       463/463
(100 %)
1 diff
(99.8 %id)
TI_57234764   .a 41 to 797 1 to 764       764/887
(86 %)
14 diff
(98.5 %id)
DA153499 amygdala .a 51 to 599 2 to 550   capped   549/552
(99 %)
0 diff
(100 %id)
DB120950 thymus .a 51 to 621 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA910960   .a 53 to 614 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB197931 trachea .a 53 to 620 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA565172 heart .a 54 to 615 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA748171   .a 55 to 617 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA629314 Kidney .a 56 to 626 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA241854 brain .a 57 to 653 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA599794   .a 57 to 609 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA911989   .a 57 to 615 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA914409   .a 57 to 604 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DB264538 uterus .a 57 to 650 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DA581759 lung .a 58 to 599 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA608990   .a 58 to 601 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA913378   .a 58 to 615 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA717076   .a 61 to 601 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA158778 amygdala .a 62 to 601 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA541012 lung .a 66 to 649 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
TI_57147795   .a 72 to 906 21 to 855       835/855
(97 %)
11 diff
(98.8 %id)
DA600845   .a 75 to 648 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
AK001634   .a 81 to 2041 1 to 1961 D53G available from FLJ,   1961/1961
(100 %)
3 diff
(99.9 %id)
DA468697   .a 81 to 637 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
CN481772 eye .a 81 to 686 1 to 606       606/606
(100 %)
0 diff
(100 %id)
DB229634 trachea .a 81 to 651 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA014493 adrenal gland .a 82 to 637 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA014736 adrenal gland .a 82 to 657 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA601950   .a 82 to 646 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BP305388   .a 82 to 661 1 to 580       580/580
(100 %)
0 diff
(100 %id)
AU132637   .a 82 to 874 2 to 802   capped   801/817
(98 %)
21 diff
(97.5 %id)
DB292159 uterus .a 82 to 655 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA599619   .a 84 to 637 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA653017   .a 84 to 638 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB258192 uterus .a 84 to 618 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
TI_45215580   .a 85 to 797 91 to 809       715/809
(88 %)
12 diff
(98.6 %id)
DB232190 trachea .a 85 to 672 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA122235 cerebellum .a 86 to 640 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA467340 cord Blood .a 86 to 632 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA696587   .a 92 to 663 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB202712 trachea .a 92 to 670 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA128206 cerebellum .a 93 to 662 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BC008745 Kidney, renal cell adenocarcinoma .a 94 to 1480 1 to 1387 E137D available from MGC, AAA   1387/1387
(100 %)
11 diff
(99.3 %id)
DA843955 placenta .a 95 to 661 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
CN484432 eye .a 97 to 665 1 to 569       569/569
(100 %)
0 diff
(100 %id)
DA199318 brain .a 98 to 663 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA472183   .a 98 to 885 2 to 787   capped   786/796
(98 %)
14 diff
(98.3 %id)
DB124137 thymus .a 98 to 668 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB205030 trachea .a 98 to 689 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
BP266352 thyroid .a 100 to 679 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BM750268 stomach .a 100 to 660 1 to 561       561/561
(100 %)
0 diff
(100 %id)
BM783240 stomach .a 100 to 770 1 to 671       671/671
(100 %)
0 diff
(100 %id)
DA194605 amygdala .a 101 to 683 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA371781 thalamus .a 101 to 644 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA373044 thalamus .a 101 to 706 2 to 607   capped   606/607
(99 %)
1 diff
(99.9 %id)
AL558966 T cells from T cell leukemia .a 101 to 911 1 to 810       810/810
(100 %)
6 diff
(99.3 %id)
BX386576   .a 101 to 979 1 to 878       878/878
(100 %)
3 diff
(99.7 %id)
BP255717 Kidney .a 101 to 680 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DA599821   .a 101 to 662 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA692520   .a 102 to 648 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA909901   .a 102 to 669 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA092052 cerebellum .a 103 to 674 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BF035723 adenocarcinoma, ovary .a 103 to 844 1 to 744       744/777
(95 %)
21 diff
(97.3 %id)
BP327557 prostata .a 104 to 684 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA146905 amygdala .a 105 to 613 2 to 511   capped   510/510
(100 %)
7 diff
(98.7 %id)
DA377482 thalamus .a 105 to 691 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA409193 thalamus .a 105 to 670 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA412802 thalamus .a 105 to 663 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA560083 heart .a 105 to 676 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BJ989437 hepatoblastoma .a 105 to 687 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
CN482137 eye .a 105 to 706 1 to 602       602/602
(100 %)
0 diff
(100 %id)
BP274587 Kidney .a 105 to 688 1 to 584       584/584
(100 %)
0 diff
(100 %id)
DA627923 Kidney .a 105 to 630 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DA748320   .a 105 to 669 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA749128   .a 105 to 674 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA750275   .a 105 to 669 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA926717 small intestine .a 105 to 688 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA962964 stomach .a 105 to 672 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB124102 thymus .a 105 to 682 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB255771 uterus .a 105 to 656 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DB258617 uterus .a 105 to 655 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB275918 uterus .a 105 to 678 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA011475 adrenal gland .a 106 to 663 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA105483 cerebellum .a 106 to 689 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA125750 cerebellum .a 106 to 692 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA226496 brain .a 106 to 644 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA248294 brain .a 106 to 687 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA264698 caudate nucleus .a 106 to 676 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA314280 hippocampus .a 106 to 673 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA332454 hippocampus .a 106 to 692 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA405758 thalamus .a 106 to 672 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA412489 thalamus .a 106 to 644 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA562638 heart .a 106 to 688 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA966727 stomach .a 106 to 652 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB109182 thymus .a 106 to 670 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB123721 thymus .a 106 to 728 2 to 624   capped   623/623
(100 %)
0 diff
(100 %id)
DB225756 trachea .a 106 to 658 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB255387 uterus .a 106 to 644 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DB259878 uterus .a 106 to 682 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA969964 stomach .a 107 to 675 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
CX869809 embryonic stem .a 111 to 853 1 to 744       744/744
(100 %)
1 diff
(99.9 %id)
AJ006470 fetal brain .a 113 to 2384 1 to 2279 exact tiling clone, AAA   2275/2279
(99 %)
10 diff
(99.6 %id)
TI_1948243486   .a 113 to 561 124 to 573       450/1247
(36 %)
11 diff
(99.2 %id)
TI_1948243811   .a 113 to 561 120 to 568   fully sequenced,   449/568
(79 %)
6 diff
(99.0 %id)
TI_1948243972   .a 113 to 561 121 to 569       449/1385
(32 %)
6 diff
(99.6 %id)
BG747825 eye, normal pigmented retinal epithelium .a 115 to 820 1 to 706       706/707
(99 %)
1 diff
(99.9 %id)
BU931550 ovary, teratocarcinoma, cell line .a 116 to 912 1 to 802       802/904
(88 %)
8 diff
(99.2 %id)
DB255991 uterus .a 116 to 670 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BQ428356 melanotic melanoma, skin .a 117 to 891 1 to 782       782/837
(93 %)
17 diff
(98.0 %id)
CD359485 testis .a 117 to 895 1 to 788       788/875
(90 %)
13 diff
(98.6 %id)
CD516948 White Matter .a 117 to 915 1 to 804       804/962
(83 %)
9 diff
(99.1 %id)
CX166662 human embryonic stem cells differentiated toan early endodermal cell type .a 118 to 851 1 to 733       733/733
(100 %)
1 diff
(99.9 %id)
DA746908   .a 118 to 680 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
TI_1948243649   .a 120 to 680 122 to 681   fully sequenced,   556/677
(82 %)
7 diff
(99.0 %id)
BU902192 leiomyosarcoma, uterus .a 124 to 1138 1 to 1020       1020/1148
(88 %)
30 diff
(97.4 %id)
BU175306 large cell carcinoma, lung .a 127 to 912 1 to 791       791/912
(86 %)
10 diff
(99.0 %id)
BU539494 adenocarcinoma, cell line, breast .a 129 to 903 1 to 789       789/943
(83 %)
25 diff
(97.4 %id)
BU856662 adenocarcinoma, cell line, breast .a 129 to 976 1 to 857       857/944
(90 %)
11 diff
(98.9 %id)
DA331906 hippocampus .a 180 to 766 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DB275467 uterus .a 186 to 752 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BU902214 leiomyosarcoma, uterus .a 187 to 1001 66 to 887       822/1200
(68 %)
25 diff
(98.0 %id)
TI_154185551   .a 189 to 912 81 to 801       717/1080
(66 %)
13 diff
(98.8 %id)
DA227787 brain .a 200 to 751 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA410576 thalamus .a 200 to 792 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DB068525 testis .a 203 to 738 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
BG938836 Bone, Hip .a 209 to 821 619 to 7       613/619
(99 %)
0 diff
(100 %id)
DA043826 bladder .a 212 to 777 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA406382 thalamus .a 212 to 747 2 to 538   capped   537/538
(99 %)
7 diff
(98.7 %id)
DA121833 cerebellum .a 239 to 793 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB037943 testis .a 242 to 797 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA102533 cerebellum .a 243 to 772 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DA238760 brain .a 243 to 818 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB050145 testis .a 243 to 811 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
AA490056   .a 256 to 605 1 to 347     Submitted on the opposite strand 347/356
(97 %)
11 diff
(97.0 %id)
BQ718961 sympathetic trunk .a 268 to 1120 1 to 870       870/887
(98 %)
35 diff
(96.1 %id)
DA101892 cerebellum .a 280 to 823 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA103445 cerebellum .a 280 to 818 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA111746 cerebellum .a 311 to 881 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BU838140 melanotic melanoma, cell line, skin .a 314 to 1150 1 to 840       840/846
(99 %)
11 diff
(98.7 %id)
BQ953454 brain, neuroblastoma, cell line .a 314 to 1041 1 to 738       738/814
(90 %)
10 diff
(98.8 %id)
BQ677531 melanotic melanoma, cell line, skin .a 316 to 1040 1 to 726       726/945
(76 %)
7 diff
(99.3 %id)
DA111763 cerebellum .a 338 to 907 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
TI_1948243812   .a 531 to 1329 917 to 123   fully sequenced,   795/917
(86 %)
2 diff
(99.8 %id)
EL952947 eyeball .a 557 to 754 1 to 202       198/202
(98 %)
5 diff
(97.6 %id)
DA189285 amygdala .a 570 to 1157 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
TI_1948243487   .a 584 to 1329 867 to 123       745/1310
(56 %)
4 diff
(99.7 %id)
TI_1948243973   .a 584 to 1329 867 to 123       745/1362
(54 %)
4 diff
(99.8 %id)
BX437872 neuroblastoma .a 603 to 1567 1 to 959       959/1010
(94 %)
10 diff
(99.1 %id)
BE182521 head_neck .a 638 to 1007 391 to 23     Submitted on the opposite strand 369/391
(94 %)
2 diff
(99.5 %id)
TI_1948243650   .a 650 to 1329 801 to 123   fully sequenced,   679/801
(84 %)
2 diff
(99.8 %id)
AI174865 Liver .a 668 to 1181 514 to 1       514/609
(84 %)
0 diff
(100 %id)
CX756828 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 668 to 1460 1 to 779     Submitted on the opposite strand 779/857
(90 %)
21 diff
(97.6 %id)
BG945383 amnion_normal .a 688 to 1222 536 to 1       536/536
(100 %)
10 diff
(98.2 %id)
TI_57170854   .a 770 to 1316 38 to 581       544/581
(93 %)
9 diff
(98.5 %id)
CN409718 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 777 to 1562 1 to 787       787/787
(100 %)
1 diff
(99.9 %id)
DA051462   .a 779 to 1343 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
AW378717 head_neck .a 814 to 1422 611 to 2       610/611
(99 %)
2 diff
(99.7 %id)
BM788222 Ascites, stomach .a 916 to 1603 1 to 688       688/688
(100 %)
0 diff
(100 %id)
TI_57188373   .a 921 to 1684 51 to 809       759/759
(100 %)
5 diff
(99.4 %id)
TI_57191508   .a 921 to 1835 111 to 1019       909/933
(97 %)
26 diff
(97.3 %id)
BX327405   .a 923 to 1268 1 to 345       345/350
(98 %)
5 diff
(98.6 %id)
TI_154193499   .a 923 to 1861 58 to 991       934/1025
(91 %)
27 diff
(97.4 %id)
DA511389 brain .a 945 to 1499 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
FN143378 breast carcinoma .a 951 to 1058 105 to 1     Submitted on the opposite strand 105/105
(100 %)
3 diff
(97.2 %id)
BM706848 eye, optic nerve .a 954 to 1554 9 to 608       600/608
(98 %)
6 diff
(99.1 %id)
BQ669926 epidermoid carcinoma, cell line, salivary gland .a 957 to 1702 1 to 747       747/946
(78 %)
27 diff
(97.2 %id)
ES311892 frontal balding hair, skin .a 959 to 1146 1 to 191       191/191
(100 %)
5 diff
(97.4 %id)
AA489301   .a 970 to 1434 1 to 465       465/465
(100 %)
1 diff
(99.8 %id)
BI045345 prostate_normal .a 978 to 1518 550 to 11       540/554
(97 %)
2 diff
(99.7 %id)
BI046470 prostate_normal .a 978 to 1509 548 to 14       535/551
(97 %)
18 diff
(96.8 %id)
AW605503 denis_drash .a 979 to 1504 526 to 1       526/526
(100 %)
4 diff
(99.3 %id)
BF934945 nervous_tumor .a 981 to 1305 325 to 1     Submitted on the opposite strand 325/325
(100 %)
0 diff
(100 %id)
BF915386 uterus_tumor .a 997 to 1612 608 to 3     Submitted on the opposite strand 608/609
(99 %)
19 diff
(96.9 %id)
BQ307601 breast .a 1002 to 1513 543 to 34       510/543
(93 %)
4 diff
(99.3 %id)
CD622515   .a 1005 to 1541 537 to 1       537/537
(100 %)
5 diff
(99.1 %id)
AW605444 denis_drash .a 1007 to 1504 498 to 2       497/498
(99 %)
2 diff
(99.6 %id)
CN409714 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1018 to 1711 1 to 694       694/694
(100 %)
0 diff
(100 %id)
DA302733 hippocampus .a 1019 to 1601 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA418557 thalamus .a 1034 to 1653 2 to 621   capped   620/620
(100 %)
0 diff
(100 %id)
BX329183   .a 1042 to 1829 799 to 1       799/937
(85 %)
42 diff
(95.6 %id)
BM801344 duodenal adenocarcinoma, cell line, small intestine .a 1042 to 1801 1 to 761       761/868
(87 %)
15 diff
(98.3 %id)
BQ345101 nervous_tumor .a 1049 to 1269 222 to 1       222/222
(100 %)
9 diff
(96.0 %id)
BQ359368 head_normal .a 1060 to 1456 401 to 1       401/401
(100 %)
5 diff
(98.8 %id)
TI_57192344   .a 1064 to 1919 57 to 908       852/854
(99 %)
18 diff
(97.9 %id)
AW385342 leiomios .a 1065 to 1477 490 to 78       413/490
(84 %)
6 diff
(98.8 %id)
BM791582 Ascites, stomach .a 1098 to 1784 1 to 687       687/687
(100 %)
0 diff
(100 %id)
BF822022 kidney_tumor .a 1121 to 1495 376 to 1     Submitted on the opposite strand 376/376
(100 %)
4 diff
(99.0 %id)
BF821578 kidney_tumor .a 1129 to 1528 411 to 12     Submitted on the opposite strand 400/411
(97 %)
0 diff
(100 %id)
BF821580 kidney_tumor .a 1129 to 1528 413 to 14     Submitted on the opposite strand 400/413
(96 %)
0 diff
(100 %id)
BF821583 kidney_tumor .a 1129 to 1528 403 to 6     Submitted on the opposite strand 398/403
(98 %)
0 diff
(100 %id)
BF927595 nervous_tumor .a 1158 to 1491 353 to 18     Submitted on the opposite strand 336/353
(95 %)
0 diff
(100 %id)
BQ344780 nervous_tumor .a 1158 to 1508 371 to 19       353/371
(95 %)
0 diff
(100 %id)
AA421381 ovarian tumor, ovary .a 1161 to 1457 1 to 297       297/297
(100 %)
6 diff
(98.0 %id)
BQ327644 kidney_tumor .a 1168 to 1448 305 to 25       281/305
(92 %)
0 diff
(100 %id)
AW860044 colon .a 1171 to 1688 518 to 3       516/518
(99 %)
0 diff
(100 %id)
AW579458 denis_drash .a 1184 to 1505 324 to 1       324/398
(81 %)
14 diff
(96.5 %id)
BF841799 head_neck .a 1184 to 1794 611 to 2     Submitted on the opposite strand 610/614
(99 %)
4 diff
(99.4 %id)
TI_159686514   .a 1184 to 2041 900 to 44   AAA   857/1035
(82 %)
9 diff
(99.2 %id)
BI016676 lung_tumor .a 1201 to 1422 225 to 5       221/225
(98 %)
0 diff
(100 %id)
CN409704 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1226 to 1976 1 to 751       751/751
(100 %)
0 diff
(100 %id)
TI_154053111   .a 1267 to 2041 849 to 80   AAA   770/935
(82 %)
8 diff
(99.2 %id)
AI906671 breast .a 1270 to 1519 264 to 15       250/281
(88 %)
0 diff
(100 %id)
BF841791 head_neck .a 1270 to 1794 534 to 10     Submitted on the opposite strand 525/551
(95 %)
0 diff
(100 %id)
BQ336165 marrow .a 1270 to 1560 341 to 60       282/352
(80 %)
0 diff
(100 %id)
AW850078 colon .a 1272 to 1597 326 to 1       326/326
(100 %)
0 diff
(100 %id)
BE934306 head_neck .a 1272 to 1521 267 to 18       250/267
(93 %)
0 diff
(100 %id)
BF758573 colon .a 1272 to 1521 271 to 22     Submitted on the opposite strand 250/271
(92 %)
0 diff
(100 %id)
TI_154029782   .a 1272 to 2058 868 to 86   AAA   783/921
(85 %)
21 diff
(97.8 %id)
TI_154129513   .a 1277 to 2035 864 to 107   AAA   758/966
(78 %)
16 diff
(98.4 %id)
BG988470 head_neck .a 1300 to 1529 242 to 13       230/242
(95 %)
0 diff
(100 %id)
W03243 liver and spleen .a 1314 to 1678 1 to 363   fully sequenced,   363/363
(100 %)
0 diff
(100 %id)
TI_154107921   .a 1314 to 2035 782 to 61   AAA   722/974
(74 %)
3 diff
(99.7 %id)
AW849753 colon .a 1324 to 1597 274 to 1       274/274
(100 %)
1 diff
(99.7 %id)
CA415430 Chondrosarcoma Grade II, Left Pelvis .a 1324 to 2041 734 to 19   AAA   716/716
(100 %)
2 diff
(99.8 %id)
CA429976 Cell Line, Chondrosarcoma .a 1325 to 2041 733 to 19   AAA   715/715
(100 %)
4 diff
(99.5 %id)
BG990832 head_neck .a 1326 to 1601 277 to 1       277/283
(97 %)
6 diff
(97.9 %id)
BQ228201 epithelioid carcinoma, Pancreas .a 1326 to 2035 757 to 43   AAA Submitted on the opposite strand 715/840
(85 %)
29 diff
(96.6 %id)
TI_149290010   .a 1327 to 2035 797 to 89   AAA   709/709
(100 %)
6 diff
(99.2 %id)
AW792941 uterus .a 1334 to 1834 503 to 1       503/503
(100 %)
1 diff
(99.9 %id)
BE541587 cervix .a 1350 to 2068 1 to 728       728/824
(88 %)
58 diff
(93.0 %id)
AW579450 denis_drash .a 1353 to 1505 173 to 17       157/173
(90 %)
0 diff
(100 %id)
BQ183748 Knee, Osteoarthritic Cartilage .a 1353 to 2041 708 to 19   AAA   690/690
(100 %)
1 diff
(99.9 %id)
CA442277 Fibrosarcoma .a 1354 to 2058 723 to 19   AAA   705/705
(100 %)
8 diff
(98.9 %id)
CA447325 Chondrosarcoma, Left Pelvis .a 1354 to 2035 697 to 17   AAA   681/681
(100 %)
1 diff
(99.9 %id)
AL580077 T cells from T cell leukemia .a 1361 to 2014 668 to 12     Submitted on the opposite strand 657/672
(97 %)
0 diff
(100 %id)
BF932214 nervous_tumor .a 1372 to 1783 412 to 1     Submitted on the opposite strand 412/412
(100 %)
8 diff
(98.1 %id)
BU184851 hepatocellular carcinoma, cell line, Liver .a 1380 to 2041 1 to 661   AAA   661/661
(100 %)
1 diff
(99.9 %id)
CA439730 lung, Lung Focal Fibrosis .a 1391 to 2067 695 to 19   AAA   677/677
(100 %)
1 diff
(99.9 %id)
BF821504 kidney_tumor .a 1414 to 1917 507 to 1     Submitted on the opposite strand 507/514
(98 %)
8 diff
(98.5 %id)
BE005598 breast_normal .a 1433 to 1835 412 to 10     Submitted on the opposite strand 403/415
(97 %)
0 diff
(100 %id)
BE005680 breast_normal .a 1433 to 1879 455 to 11     Submitted on the opposite strand 445/458
(97 %)
0 diff
(100 %id)
BE089811 breast .a 1433 to 1879 472 to 25     Submitted on the opposite strand 448/474
(94 %)
0 diff
(100 %id)
BE089813 breast .a 1433 to 1879 464 to 17     Submitted on the opposite strand 448/480
(93 %)
0 diff
(100 %id)
BE089814 breast .a 1433 to 1879 465 to 18     Submitted on the opposite strand 448/467
(95 %)
0 diff
(100 %id)
BE089817 breast .a 1433 to 1878 460 to 14     Submitted on the opposite strand 447/461
(96 %)
0 diff
(100 %id)
CA310364 Alveolar Macrophage, lung .a 1439 to 2050 632 to 19   AAA   614/614
(100 %)
3 diff
(99.6 %id)
BE005743 breast_normal .a 1444 to 1878 433 to 1     Submitted on the opposite strand 433/433
(100 %)
3 diff
(99.4 %id)
BE005822 breast_normal .a 1444 to 1872 429 to 1     Submitted on the opposite strand 429/429
(100 %)
2 diff
(99.6 %id)
BE178913 head_neck .a 1444 to 1581 142 to 5     Submitted on the opposite strand 138/142
(97 %)
0 diff
(100 %id)
BJ989438 hepatoblastoma .a 1473 to 1952 480 to 1       480/480
(100 %)
0 diff
(100 %id)
BQ876971 epidermoid carcinoma, cell line, lung .a 1478 to 2035 577 to 19   AAA Submitted on the opposite strand 559/752
(74 %)
11 diff
(98.6 %id)
AW388815 stomach .a 1482 to 1871 394 to 8       387/410
(94 %)
0 diff
(100 %id)
AW388886 stomach .a 1482 to 1858 377 to 2       376/390
(96 %)
0 diff
(100 %id)
AW576914 breast .a 1482 to 1952 518 to 48       471/551
(85 %)
0 diff
(100 %id)
FN083252 breast carcinoma .a 1503 to 1599 98 to 3     Submitted on the opposite strand 96/98
(97 %)
0 diff
(100 %id)
BM740671 Ascites, stomach .a 1534 to 2137 1 to 604       604/604
(100 %)
0 diff
(100 %id)
CA439937 lung, Lung Focal Fibrosis .a 1537 to 2035 1 to 504   AAA Submitted on the opposite strand 504/504
(100 %)
6 diff
(98.9 %id)
BU615912 Bone, Subchondral Bone .a 1539 to 2050 530 to 19   AAA   512/512
(100 %)
7 diff
(98.7 %id)
BF913232 uterus_tumor .a 1542 to 1990 451 to 1     Submitted on the opposite strand 451/483
(93 %)
23 diff
(95.3 %id)
BF590372 pooled .a 1543 to 2050 523 to 16   AAA   508/508
(100 %)
2 diff
(99.7 %id)
DB568109 hypothalamus .a 1553 to 2033 1 to 481     Submitted on the opposite strand 481/481
(100 %)
2 diff
(99.6 %id)
DB571165 hypothalamus .a 1558 to 2033 1 to 476     Submitted on the opposite strand 476/476
(100 %)
6 diff
(98.8 %id)
AL580676 T cells from T cell leukemia .a 1565 to 2538 970 to 1       970/989
(98 %)
27 diff
(97.3 %id)
BF981720 duodenal adenocarcinoma, cell line, small intestine .a 1573 to 2057 13 to 495   AAA   483/495
(97 %)
6 diff
(98.8 %id)
BI850529 duodenal adenocarcinoma, cell line, small intestine .a 1573 to 2057 1 to 485   AAA   485/485
(100 %)
0 diff
(100 %id)
AW083170 colon, moderately differentiated adenocarcinoma .a 1575 to 2041 467 to 1       467/467
(100 %)
2 diff
(99.6 %id)
AA916385 adenocarcinoma, colon .a 1591 to 2039 453 to 5       449/453
(99 %)
0 diff
(100 %id)
AA486278   .a 1593 to 2042 450 to 1       450/450
(100 %)
0 diff
(100 %id)
AW055301 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1621 to 2042 424 to 3       422/424
(99 %)
0 diff
(100 %id)
BI467385 Pancreas, Purified pancreatic islet .a 1623 to 2037 415 to 1       415/415
(100 %)
0 diff
(100 %id)
BM310146 insulinoma, Pancreas .a 1623 to 2041 435 to 17   AAA   419/419
(100 %)
1 diff
(99.8 %id)
AW780443 colon, moderately-differentiated adenocarcinoma .a 1625 to 2058 434 to 1       434/434
(100 %)
0 diff
(100 %id)
TI_57181836   .a 1625 to 2035 32 to 442   AAA   411/442
(92 %)
6 diff
(98.7 %id)
BI769013 pooled lung and spleen .a 1630 to 2035 1 to 406   AAA   406/406
(100 %)
0 diff
(100 %id)
AI753339 bone marrow stroma .a 1632 to 2043 430 to 19   AAA   412/412
(100 %)
0 diff
(100 %id)
AI025615 parathyroid gland, parathyroid tumor .a 1636 to 2035 429 to 30   AAA   400/400
(100 %)
0 diff
(100 %id)
AI583075 adenocarcinoma, Pancreas .a 1636 to 2057 425 to 3       423/425
(99 %)
0 diff
(100 %id)
T05480   .a 1637 to 1901 267 to 1       267/267
(100 %)
4 diff
(98.6 %id)
AA489901   .a 1645 to 2033 389 to 1     Submitted on the opposite strand 389/389
(100 %)
1 diff
(99.8 %id)
N69427 liver and spleen .a 1648 to 2035 392 to 1   fully sequenced,   392/392
(100 %)
3 diff
(99.3 %id)
AA883072 pooled .a 1667 to 2045 380 to 2       379/380
(99 %)
0 diff
(100 %id)
AI383731   .a 1672 to 2041 370 to 1       370/370
(100 %)
0 diff
(100 %id)
AW276907 ovary, papillary serous ovarian metastasis .a 1672 to 2037 381 to 16       366/381
(96 %)
0 diff
(100 %id)
BU533389 mixed (pool of 40 RNAs) .a 1674 to 2050 1 to 377   AAA   377/377
(100 %)
0 diff
(100 %id)
BF914645 uterus_tumor .a 1681 to 1990 311 to 1     Submitted on the opposite strand 311/313
(99 %)
13 diff
(95.9 %id)
AU154133   .a 1691 to 2041 351 to 1       351/351
(100 %)
0 diff
(100 %id)
AI537043 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 1694 to 2041 360 to 13   AAA   348/348
(100 %)
0 diff
(100 %id)
AW068678 Bone, Hip .a 1697 to 2009 320 to 8       313/320
(97 %)
0 diff
(100 %id)
AA862346 2 pooled tumors (clear cell type), Kidney .a 1705 to 2050 376 to 31   AAA   346/346
(100 %)
0 diff
(100 %id)
BG056896 anaplastic oligodendroglioma, brain .a 1705 to 2038 349 to 16   AAA   334/334
(100 %)
0 diff
(100 %id)
DA762477 tongue .a 1706 to 2275 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BP318909 pericardium .a 1708 to 2289 1 to 582   tiling clone,   582/582
(100 %)
0 diff
(100 %id)
AI084672 senescent fibroblast .a 1718 to 2057 370 to 31   AAA   340/340
(100 %)
1 diff
(99.8 %id)
TI_154154759   .a 1720 to 2358 78 to 715       638/638
(100 %)
4 diff
(99.4 %id)
AA602960   .a 1729 to 2049 1 to 317   AAA   317/317
(100 %)
5 diff
(98.5 %id)
BU751985 placenta .a 1745 to 2038 311 to 18   AAA   294/294
(100 %)
2 diff
(99.4 %id)
BM991908 Bone, Subchondral Bone .a 1764 to 2384 639 to 19   AAA   621/621
(100 %)
0 diff
(100 %id)
BY999111   .a 1769 to 2037 1 to 269     Submitted on the opposite strand 269/270
(99 %)
1 diff
(99.7 %id)
AA421336 ovarian tumor, ovary .a 1772 to 2041 286 to 17   AAA   270/270
(100 %)
0 diff
(100 %id)
BE242074 leukopheresis .a 1800 to 2050 251 to 1       251/251
(100 %)
6 diff
(97.7 %id)
CR746301 pooled germ cell tumors .a 1823 to 2040 218 to 1     Submitted on the opposite strand 218/218
(100 %)
0 diff
(100 %id)
BQ271107 Pancreas, Purified pancreatic islet .a 1833 to 2159 327 to 1       327/327
(100 %)
0 diff
(100 %id)
AI266544 2 pooled tumors (clear cell type), Kidney .a 1839 to 2036 204 to 7       198/204
(97 %)
0 diff
(100 %id)
AW024827 Kidney .a 1857 to 2041 185 to 1       185/185
(100 %)
0 diff
(100 %id)
AI754572 bone marrow stroma .a 1860 to 2039 203 to 24   AAA   180/180
(100 %)
1 diff
(99.5 %id)
BU788124 insulinoma, Pancreas .a 1871 to 2045 1 to 175       175/192
(91 %)
2 diff
(99.0 %id)
AI700698 carcinoid, lung .a 1877 to 2348 1 to 472     Submitted on the opposite strand 472/472
(100 %)
0 diff
(100 %id)
AW148348 Kidney, renal cell tumor .a 1882 to 2043 176 to 15   AAA   162/164
(98 %)
0 diff
(100 %id)
AW068656 Bone, Hip .a 1933 to 2493 567 to 1       567/567
(100 %)
9 diff
(98.5 %id)
AA195280 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1991 to 2384 1 to 396   fully sequenced, Submitted on the opposite strand 396/396
(100 %)
7 diff
(98.3 %id)
AI085771 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1992 to 2345 1 to 353     Submitted on the opposite strand 353/353
(100 %)
1 diff
(99.8 %id)
FN108311 breast carcinoma .a 2145 to 2247 106 to 4     Submitted on the opposite strand 103/106
(97 %)
0 diff
(100 %id)
AW903288 nervous_normal .a 2180 to 2602 445 to 19       427/445
(95 %)
0 diff
(100 %id)
BP388008 pancreatic islet .a 2195 to 2519 1 to 332     Submitted on the opposite strand 332/332
(100 %)
3 diff
(99.1 %id)
DA970412 stomach .a 2211 to 2768 2 to 559   tiling clone, capped   558/558
(100 %)
0 diff
(100 %id)
AW859946 colon .a 2224 to 2778 566 to 6       561/566
(99 %)
0 diff
(100 %id)
AW859991 colon .a 2224 to 2778 566 to 6       561/566
(99 %)
0 diff
(100 %id)
BE241838 leukopheresis .a 2240 to 2648 414 to 1       414/414
(100 %)
7 diff
(98.4 %id)
AA195144 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2268 to 2378 110 to 1   fully sequenced, Submitted on the opposite strand 110/110
(100 %)
0 diff
(100 %id)
AW410584 muscle, rhabdomyosarcoma .a 2269 to 2721 14 to 466       453/466
(97 %)
6 diff
(98.8 %id)
BF851736 lung_normal .a 2386 to 2713 361 to 35     Submitted on the opposite strand 327/365
(89 %)
0 diff
(100 %id)
BE740342 adenocarcinoma cell line, ovary .a 2467 to 3233 1 to 761   tiling clone,   761/954
(79 %)
17 diff
(98.3 %id)
AW844067 colon_normal .a 2681 to 3043 367 to 1       367/367
(100 %)
5 diff
(98.7 %id)
TI_154189275   .a 2781 to 3628 47 to 882   tiling clone,   836/996
(83 %)
18 diff
(98.2 %id)
TI_154192837   .a 2781 to 3740 47 to 1001       955/1028
(92 %)
16 diff
(98.5 %id)
CF126307 Chondrosarcoma Lung Metastasis cell lines, lung .a 2785 to 3518 1 to 733       733/733
(100 %)
4 diff
(99.5 %id)
BM557305 amelanotic melanoma, cell line, skin .a 2828 to 3840 26 to 1046       1021/1064
(95 %)
28 diff
(97.4 %id)
BM554453 amelanotic melanoma, cell line, skin .a 2828 to 3728 23 to 924       902/1131
(79 %)
13 diff
(98.9 %id)
BM558598 amelanotic melanoma, cell line, skin .a 2828 to 3735 1 to 909       909/1032
(88 %)
16 diff
(98.5 %id)
TI_59384707   .a 2828 to 3302 59 to 544       486/486
(100 %)
13 diff
(97.4 %id)
BF810204 colon_ins .a 2866 to 3177 312 to 2     Submitted on the opposite strand 311/312
(99 %)
0 diff
(100 %id)
BF941706 fibrotheoma, ovary .a 2884 to 3234 1 to 351     Submitted on the opposite strand 351/351
(100 %)
3 diff
(99.2 %id)
BF090564 nervous_tumor .a 2928 to 3319 393 to 3       391/402
(97 %)
0 diff
(100 %id)
ES316277 pool of melanoma cell lines .a 2938 to 3393 545 to 91     Submitted on the opposite strand 455/545
(83 %)
0 diff
(100 %id)
BM700582 eye, lens .a 2950 to 3290 1 to 341   fully sequenced,   341/341
(100 %)
1 diff
(99.8 %id)
BF838465 head_neck .a 2998 to 3303 307 to 1     Submitted on the opposite strand 307/315
(97 %)
6 diff
(98.1 %id)
BF838656 head_neck .a 2998 to 3487 506 to 19     Submitted on the opposite strand 488/522
(93 %)
0 diff
(100 %id)
BF838659 head_neck .a 2998 to 3325 331 to 4     Submitted on the opposite strand 328/339
(96 %)
0 diff
(100 %id)
BF838661 head_neck .a 2998 to 3483 490 to 6     Submitted on the opposite strand 485/501
(96 %)
0 diff
(100 %id)
BF838654 head_neck .a 3003 to 3483 483 to 4     Submitted on the opposite strand 480/483
(99 %)
0 diff
(100 %id)
BF838672 head_neck .a 3008 to 3491 494 to 12     Submitted on the opposite strand 483/494
(97 %)
0 diff
(100 %id)
GD154164   .a 3028 to 3474 460 to 1     Submitted on the opposite strand 460/462
(99 %)
6 diff
(98.8 %id)
GD154165   .a 3028 to 3474 447 to 1     Submitted on the opposite strand 447/449
(99 %)
13 diff
(97.2 %id)
DA289593 hippocampus .a 3036 to 3610 2 to 577   capped   576/576
(100 %)
3 diff
(99.5 %id)
DA389424 thalamus .a 3037 to 3615 2 to 583   capped   582/582
(100 %)
6 diff
(99.0 %id)
TI_227712901   .a 3054 to 3907 927 to 81   AAA   847/980
(86 %)
26 diff
(97.4 %id)
BM689295 eye, optic nerve .a 3093 to 3568 3 to 478   fully sequenced,   476/478
(99 %)
6 diff
(98.8 %id)
TI_149284028   .a 3101 to 3907 869 to 84   AAA   786/795
(98 %)
27 diff
(96.7 %id)
FN112890 breast carcinoma .a 3122 to 3231 110 to 1     Submitted on the opposite strand 110/110
(100 %)
1 diff
(99.1 %id)
BC073904 Liver, adenocarcinoma .a 3128 to 3907 1 to 780   tiling clone, available from MGC, AAA   780/780
(100 %)
1 diff
(99.9 %id)
BG121933 adenocarcinoma, cell line, Liver .a 3128 to 3838 1 to 710   available from MGC,   710/710
(100 %)
10 diff
(98.6 %id)
BQ014307 Chondrosarcoma, Left Pubic Bone .a 3143 to 3907 772 to 19   AAA   754/756
(99 %)
15 diff
(98.1 %id)
BF838459 head_neck .a 3184 to 3485 318 to 17     Submitted on the opposite strand 302/321
(94 %)
0 diff
(100 %id)
AW954321   .a 3188 to 3748 1 to 561       561/573
(97 %)
7 diff
(98.8 %id)
TI_151702463   .a 3189 to 3907 843 to 125   AAA   719/835
(86 %)
40 diff
(95.3 %id)
TI_149288754   .a 3202 to 3907 791 to 87   AAA   705/706
(99 %)
6 diff
(99.2 %id)
BQ007560 Chondrosarcoma, Left Pubic Bone .a 3207 to 3911 723 to 19   AAA   705/705
(100 %)
2 diff
(99.8 %id)
TI_154102610   .a 3210 to 3907 773 to 88   AAA   686/769
(89 %)
10 diff
(98.7 %id)
BI045952 prostate_normal .a 3214 to 3782 572 to 4       569/572
(99 %)
0 diff
(100 %id)
BM687704 eye, eye anterior segment .a 3215 to 3719 2 to 506   fully sequenced,   505/506
(99 %)
6 diff
(98.9 %id)
AW296763   .a 3227 to 3576 14 to 363   AAA Submitted on the opposite strand 350/363
(96 %)
6 diff
(98.4 %id)
BI194378 epithelioid carcinoma cell line, Pancreas .a 3228 to 3909 1 to 683       683/693
(98 %)
6 diff
(99.2 %id)
BC094866 Pancreas, epithelioid carcinoma .a 3229 to 3911 1 to 683   AAA   683/683
(100 %)
1 diff
(99.9 %id)
BQ006849 Chondrosarcoma, Left Pelvis .a 3230 to 3911 699 to 19   AAA   681/681
(100 %)
1 diff
(99.9 %id)
CD367278 Alveolar Macrophage, lung .a 3236 to 3907 691 to 19   AAA   673/673
(100 %)
2 diff
(99.8 %id)
BU737804 eye, lens .a 3260 to 3904 666 to 22   fully sequenced,   645/666
(96 %)
1 diff
(99.9 %id)
BM970570 lung .a 3271 to 3907 654 to 19   AAA   636/636
(100 %)
2 diff
(99.7 %id)
AA027135 uterus .a 3282 to 3580 1 to 303   fully sequenced,   303/303
(100 %)
0 diff
(100 %id)
BQ220756 melanotic melanoma, skin .a 3316 to 4047 24 to 762       739/800
(92 %)
14 diff
(98.3 %id)
BM984394 lung, Primary Lung Epithelial Cells .a 3320 to 3907 606 to 19   AAA   588/588
(100 %)
1 diff
(99.9 %id)
BE165989 head_neck .a 3323 to 3617 353 to 60     Submitted on the opposite strand 294/423
(69 %)
0 diff
(100 %id)
CA445580 Chondrosarcoma, Left Pubic Bone .a 3328 to 3907 598 to 19   AAA   580/580
(100 %)
1 diff
(99.9 %id)
CA425737 cell lines, Chondrosarcoma .a 3340 to 3907 587 to 19   AAA   569/569
(100 %)
1 diff
(99.9 %id)
H14467 breast .a 3348 to 3744 1 to 405       405/414
(97 %)
13 diff
(96.9 %id)
AW410585 muscle, rhabdomyosarcoma .a 3352 to 3910 603 to 45   AAA   559/559
(100 %)
3 diff
(99.5 %id)
AW024741 Kidney .a 3368 to 3907 545 to 6       540/545
(99 %)
0 diff
(100 %id)
CA395680 eye, RPE/choroid .a 3394 to 3911 1 to 518   AAA   518/518
(100 %)
1 diff
(99.9 %id)
BQ016206 lung, Metastatic Chondrosarcoma .a 3402 to 3907 525 to 19   AAA   507/507
(100 %)
1 diff
(99.9 %id)
CB962457 Blood vessels - aorta, basilar and artery .a 3415 to 3907 1 to 493       493/503
(98 %)
2 diff
(99.7 %id)
AA135863 uterus .a 3436 to 3869 15 to 456       442/457
(96 %)
15 diff
(96.8 %id)
AA424951 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3436 to 3878 10 to 451       442/451
(98 %)
6 diff
(98.7 %id)
AW444579   .a 3440 to 3907 485 to 18   AAA   468/473
(98 %)
1 diff
(99.8 %id)
BU630398 cell lines, Chondrosarcoma .a 3440 to 3911 491 to 19   AAA   473/473
(100 %)
4 diff
(99.2 %id)
AI366776 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3442 to 3908 465 to 1       465/465
(100 %)
3 diff
(99.4 %id)
AI498872 anaplastic oligodendroglioma, brain .a 3461 to 3907 447 to 1       447/447
(100 %)
6 diff
(98.7 %id)
AI973044 Prostate .a 3461 to 3907 452 to 6       447/452
(98 %)
0 diff
(100 %id)
AI075432 senescent fibroblast .a 3464 to 3907 450 to 7       444/450
(98 %)
0 diff
(100 %id)
AA916072 breast .a 3474 to 3907 433 to 3       431/433
(99 %)
0 diff
(100 %id)
AI093319 uterus .a 3475 to 3907 449 to 17   AAA   433/433
(100 %)
0 diff
(100 %id)
AI351434   .a 3488 to 3907 422 to 1       422/435
(97 %)
10 diff
(97.8 %id)
AI635673 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3497 to 3907 412 to 2       411/412
(99 %)
0 diff
(100 %id)
AA302868 adipose tissue, white .a 3501 to 3910 413 to 1       413/416
(99 %)
4 diff
(99.1 %id)
BU195612 eye, retinoblastoma .a 3501 to 3907 463 to 57   AAA Submitted on the opposite strand 407/423
(96 %)
20 diff
(95.3 %id)
D45465 lung .a 3520 to 3911 1 to 395     Submitted on the opposite strand 395/400
(98 %)
4 diff
(99.0 %id)
AI420076 Prostate .a 3526 to 3911 391 to 7       385/391
(98 %)
0 diff
(100 %id)
BE173394 head_neck .a 3533 to 3798 268 to 3     Submitted on the opposite strand 266/268
(99 %)
0 diff
(100 %id)
AI669179 Prostate .a 3536 to 3907 376 to 5       372/376
(98 %)
0 diff
(100 %id)
BU727409 eye, optic nerve .a 3538 to 3904 388 to 22   fully sequenced,   367/388
(94 %)
1 diff
(99.8 %id)
AV724875 hypothalamus .a 3539 to 3917 1 to 379       379/595
(63 %)
5 diff
(99.2 %id)
CD514358 White Matter .a 3542 to 4362 28 to 855       828/875
(94 %)
6 diff
(99.4 %id)
AI744155 Prostate .a 3544 to 3907 393 to 30   AAA   364/364
(100 %)
13 diff
(96.5 %id)
AA027096 uterus .a 3550 to 3907 359 to 1   fully sequenced,   359/359
(100 %)
2 diff
(99.5 %id)
AI240010 pooled .a 3552 to 3907 356 to 1       356/356
(100 %)
5 diff
(98.6 %id)
AI201405 Prostate .a 3555 to 3907 354 to 2       353/354
(99 %)
0 diff
(100 %id)
BU728177 eye, optic nerve .a 3555 to 3907 371 to 19   AAA   353/353
(100 %)
0 diff
(100 %id)
BQ005269 Chondrosarcoma, Left Pelvis .a 3560 to 3907 365 to 19   AAA   347/347
(100 %)
2 diff
(99.5 %id)
AA317478 retina .a 3570 to 3891 1 to 322       322/322
(100 %)
0 diff
(100 %id)
AW954889   .a 3571 to 3907 1 to 337   AAA   337/337
(100 %)
0 diff
(100 %id)
T92791 lung .a 3591 to 3911 1 to 325       325/327
(99 %)
8 diff
(97.6 %id)
AW451691   .a 3594 to 3907 331 to 18   AAA   314/314
(100 %)
0 diff
(100 %id)
AW183249 pooled .a 3639 to 3907 278 to 9       270/278
(97 %)
0 diff
(100 %id)
CD103650 Pooled-Skin .a 3659 to 3910 1 to 252   AAA   252/252
(100 %)
2 diff
(99.3 %id)
BQ342679 nervous_normal .a 3675 to 3837 1 to 163       163/163
(100 %)
9 diff
(94.5 %id)
CA440248 lung, Metastatic Chondrosarcoma .a 3681 to 3909 248 to 19   AAA   230/230
(100 %)
1 diff
(99.6 %id)
CU447270 epidermis .a 3688 to 4401 10 to 723       714/723
(98 %)
6 diff
(99.2 %id)
CU450187 epidermis .a 3688 to 4450 10 to 772       763/772
(98 %)
6 diff
(99.3 %id)
CU454024 epidermis .a 3688 to 4444 10 to 766   tiling clone,   757/766
(98 %)
6 diff
(99.3 %id)
CU456032 epidermis .a 3688 to 4309 10 to 632       623/633
(98 %)
5 diff
(99.3 %id)
CU456072 epidermis .a 3688 to 4291 10 to 613       604/613
(98 %)
6 diff
(99.1 %id)
CU456443 epidermis .a 3688 to 4334 10 to 656       647/656
(98 %)
6 diff
(99.1 %id)
CU457155 epidermis .a 3688 to 4219 10 to 541       532/545
(97 %)
3 diff
(99.5 %id)
BM672650 eye, eye anterior segment .a 3689 to 3904 237 to 22   fully sequenced,   216/237
(91 %)
2 diff
(99.2 %id)
BE857671 Prostate .a 3712 to 3907 203 to 8       196/205
(95 %)
0 diff
(100 %id)
AI470411 pooled .a 3732 to 3907 176 to 1       176/176
(100 %)
0 diff
(100 %id)
AI804946 Prostate .a 3735 to 3907 173 to 1       173/173
(100 %)
0 diff
(100 %id)
CU456738 epidermis .a 3829 to 4216 1 to 388       388/392
(98 %)
4 diff
(99.0 %id)
AW954437   .a 3918 to 4518 1 to 601       601/602
(99 %)
1 diff
(99.9 %id)
BF829374 head_normal .a 3973 to 4499 539 to 14     Submitted on the opposite strand 526/611
(86 %)
0 diff
(100 %id)
AA490389 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4230 to 4567 1 to 336   fully sequenced,   336/336
(100 %)
3 diff
(99.2 %id)
AL120711 melanoma (MeWo cell line) .a 4292 to 4870 1 to 579   tiling clone,   579/579
(100 %)
1 diff
(99.9 %id)
BF933247 nervous_tumor .a 4493 to 4843 351 to 1     Submitted on the opposite strand 351/351
(100 %)
1 diff
(99.8 %id)
AA490280 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4537 to 4905 369 to 1   fully sequenced,   369/369
(100 %)
0 diff
(100 %id)
AW960762   .a 4554 to 5257 1 to 705       705/706
(99 %)
8 diff
(98.9 %id)
AK027235 Human lung .a 4703 to 6649 1 to 1947   tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1947/1947
(100 %)
1 diff
(100.0 %id)
BF934509 nervous_tumor .a 4776 to 5136 360 to 1     Submitted on the opposite strand 360/360
(100 %)
4 diff
(98.9 %id)
BF934370 nervous_tumor .a 4779 to 5136 358 to 1     Submitted on the opposite strand 358/363
(98 %)
4 diff
(98.9 %id)
BF934241 nervous_tumor .a 4788 to 5136 349 to 1     Submitted on the opposite strand 349/349
(100 %)
1 diff
(99.8 %id)
BF934513 nervous_tumor .a 4876 to 5136 260 to 1     Submitted on the opposite strand 260/260
(100 %)
6 diff
(97.7 %id)
BF744957 breast .a 4983 to 5320 351 to 15     Submitted on the opposite strand 337/357
(94 %)
0 diff
(100 %id)
AW838093 leiomios .a 4998 to 5361 364 to 2       363/417
(87 %)
0 diff
(100 %id)
BU615816 Bone, Subchondral Bone .a 5102 to 5769 685 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 667/676
(98 %)
1 diff
(99.9 %id)
BQ683328 melanotic melanoma, cell line, skin .a 5343 to 6259 1 to 926       926/931
(99 %)
22 diff
(97.7 %id)
AL110145 uterus .a 5372 to 6647 9 to 1286   available from DKFZ, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1278/1278
(100 %)
1 diff
(100.0 %id)
TI_153988535   .a 5392 to 5769 467 to 90   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 378/378
(100 %)
0 diff
(100 %id)
FN071202 breast carcinoma .a 5398 to 5476 77 to 1     Submitted on the opposite strand 77/77
(100 %)
2 diff
(97.5 %id)
CD675927 eye, lens .a 5596 to 6222 1 to 627       627/627
(100 %)
0 diff
(100 %id)
BX097290 melanocyte .a 5611 to 6277 1 to 667       667/667
(100 %)
0 diff
(100 %id)
BF594623 Kidney .a 5642 to 6050 1 to 411     Submitted on the opposite strand 411/411
(100 %)
8 diff
(98.1 %id)
AI363023 anaplastic oligodendroglioma, brain .a 5695 to 6132 15 to 452     Submitted on the opposite strand 438/452
(96 %)
6 diff
(98.7 %id)
N23541 melanocyte .a 5715 to 5992 1 to 278       278/367
(75 %)
4 diff
(99.0 %id)
CB158316 Liver .a 5815 to 6370 1 to 556       556/556
(100 %)
0 diff
(100 %id)
TI_154028878   .a 5926 to 6618 64 to 756     Submitted on the opposite strand 693/894
(77 %)
6 diff
(99.4 %id)
CA437716 lung, Metastatic Chondrosarcoma .a 5972 to 6598 640 to 14   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 627/627
(100 %)
0 diff
(100 %id)
TI_151809134   .a 6057 to 6648 78 to 669   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 592/592
(100 %)
2 diff
(99.7 %id)
AI887889 carcinoid, lung .a 6121 to 6644 524 to 1       524/524
(100 %)
0 diff
(100 %id)
TI_154093055   .a 6181 to 6649 584 to 116   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 469/469
(100 %)
1 diff
(99.8 %id)
AA687169 germinal center B cell .a 6243 to 6650 414 to 7   tiling clone,   408/414
(98 %)
0 diff
(100 %id)
TI_153986614   .a 6256 to 6522 496 to 230       267/274
(97 %)
1 diff
(99.7 %id)
FN056990 breast carcinoma .a 6448 to 6560 1 to 116       116/117
(99 %)
8 diff
(93.2 %id)
AK097650 testis .b 1 to 1811 1 to 1810 I198L D200T L201W E202K T203P ... tiling clone, available from FLJ,   1810/1810
(100 %)
3 diff
(99.9 %id)
BM550012 astrocytoma grade IV, cell line, brain .c 1 to 866 32 to 908   tiling clone,   873/1109
(78 %)
24 diff
(97.9 %id)
BF911755 uterus_tumor .c 869 to 1318 1 to 447   tiling clone,   447/455
(98 %)
12 diff
(97.4 %id)
BF094940 uterus_tumor .c 896 to 1311 416 to 1   tiling clone,   416/416
(100 %)
1 diff
(99.8 %id)
BF094921 uterus_tumor .c 911 to 1311 1 to 403       403/403
(100 %)
9 diff
(97.8 %id)
AW263975 brain, three pooled meningiomas .c 1005 to 1457 455 to 3       453/455
(99 %)
0 diff
(100 %id)
AA604999 adrenal adenoma, adrenal gland .c 1212 to 1450 261 to 23   AAA   239/253
(94 %)
0 diff
(100 %id)
AW068655 Bone, Hip .c 1212 to 1793 16 to 597   tiling clone,   582/597
(97 %)
0 diff
(100 %id)
BG032618 breast, mammary adenocarcinoma, cell line .d 1 to 797 1 to 793 A23R G24R R25A A26R Q27P ... tiling clone,   793/899
(88 %)
31 diff
(96.6 %id)
DA234499 brain .e 1 to 576 2 to 578   capped   577/587
(98 %)
2 diff
(99.7 %id)
BP227903   .e 1 to 576 1 to 576   tiling clone,   576/581
(99 %)
2 diff
(99.7 %id)
DA747652   .e 5 to 576 2 to 574   capped   573/576
(99 %)
3 diff
(99.5 %id)
DA986236 synovial membrane tissue from rheumatioidarthritis .e 5 to 576 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DB220742 trachea .e 5 to 576 2 to 583   capped   582/589
(98 %)
15 diff
(97.5 %id)
DA913703   .e 20 to 576 2 to 559   capped   558/566
(98 %)
1 diff
(99.9 %id)
DA998727 breast, tumor tissue .e 33 to 576 2 to 547   capped   546/553
(98 %)
4 diff
(99.3 %id)
DA706394   .e 36 to 576 2 to 543   capped   542/551
(98 %)
1 diff
(99.9 %id)
DA037488   .e 37 to 576 2 to 542   capped   541/547
(98 %)
2 diff
(99.7 %id)
DB258454 uterus .e 39 to 576 2 to 540   capped   539/549
(98 %)
3 diff
(99.5 %id)
DA703309   .e 54 to 576 2 to 523   capped   522/529
(98 %)
2 diff
(99.7 %id)
CR622212 Placenta Cot 25-normalized .e 63 to 1978 1 to 1916 exact     1916/1916
(100 %)
0 diff
(100 %id)
DA697311   .e 68 to 576 2 to 511   capped   510/520
(98 %)
2 diff
(99.7 %id)
DA707718   .e 68 to 576 2 to 510   capped   509/516
(98 %)
3 diff
(99.5 %id)
DA662563   .e 75 to 576 2 to 503   capped   502/509
(98 %)
2 diff
(99.7 %id)
DB206662 trachea .e 79 to 576 2 to 499   capped   498/505
(98 %)
3 diff
(99.5 %id)
BU535423 adenocarcinoma, cell line, breast .e 82 to 573 1 to 493       493/1056
(46 %)
14 diff
(98.7 %id)
DA417116 thalamus .e 83 to 576 2 to 495   capped   494/496
(99 %)
6 diff
(98.8 %id)
CR618116 T cells (Jurkat cell line) Cot10-normalized .e 83 to 2524 1 to 2442 exact tiling clone,   2442/2442
(100 %)
0 diff
(100 %id)
DN996868 breast cancer, Mammary gland (cancer tissue) .e 83 to 651 9 to 573       565/573
(98 %)
6 diff
(99.0 %id)
DA325396 hippocampus .e 85 to 576 2 to 493   capped   492/499
(98 %)
1 diff
(99.8 %id)
DA470868   .e 86 to 576 2 to 493   capped   492/499
(98 %)
3 diff
(99.4 %id)
DA093021 cerebellum .e 87 to 576 2 to 491   capped   490/497
(98 %)
2 diff
(99.6 %id)
DA223711 brain .e 87 to 576 2 to 491   capped   490/497
(98 %)
2 diff
(99.6 %id)
DB242306 stomach, tumor tissue .e 87 to 576 2 to 491   capped   490/497
(98 %)
3 diff
(99.4 %id)
CR594104 neuroblastoma .e 93 to 1976 1 to 1884 exact     1884/1884
(100 %)
0 diff
(100 %id)
CR597717 Placenta Cot 25-normalized .e 104 to 2012 1 to 1909 exact     1909/1909
(100 %)
0 diff
(100 %id)
CR613224 neuroblastoma .e 104 to 1967 1 to 1864 exact     1864/1864
(100 %)
0 diff
(100 %id)
CR625365 T cells (Jurkat cell line) .e 104 to 1989 1 to 1886 exact     1886/1886
(100 %)
0 diff
(100 %id)
DC394868 testis .f 1 to 562 1 to 563 C181W A182C V183S S184Q Y185L ... tiling clone,   563/563
(100 %)
1 diff
(99.9 %id)
AW819599 stomach .g 1 to 416 416 to 1 F84L tiling clone,   416/416
(100 %)
1 diff
(99.8 %id)
DB050608 testis .h 1 to 557 2 to 558 exact tiling clone, capped   557/557
(100 %)
1 diff
(99.9 %id)
CA444132 Fibrosarcoma .i 1 to 445 463 to 19 exact tiling clone, AAA   445/445
(100 %)
0 diff
(100 %id)
AK091772 lung Gene CRTAP, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
AK092990 Spleen Gene CRTAP, variant not shown       available from FLJ, AAA Suspected internal deletion, this clone was ignored    
AK126433 uterus Gene CRTAP, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
AK298250 Kidney Gene CRTAP, variant not shown         Suspected internal deletion, this clone was ignored    
DC323725 brain Gene CRTAP, variant not shown         Suspected internal deletion, this clone was ignored    
BX343849 Placenta Cot 25-normalized Gene CRTAP, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BX648233 fetal kidney Gene CRTAP, variant not shown       available from DKFZ, AAA This clone was ignored    
AA535890 colon Gene CRTAP, variant not shown         This clone was ignored    
AI565745 anaplastic oligodendroglioma, brain Gene CRTAP, variant not shown         This clone was ignored    
AI869583 anaplastic oligodendroglioma, brain Gene CRTAP, variant not shown         This clone was ignored    
AW772292 Kidney Gene CRTAP, variant not shown         This clone was ignored    
BE548248 cervical carcinoma cell line, cervix Gene CRTAP, variant not shown         This clone was ignored    
DC361335 Kidney Gene CRTAP, variant not shown         Suspected internal deletion, this clone was ignored    
DC395467 testis Gene CRTAP, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
DC426737 testis Gene CRTAP, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
DC410312 thymus Gene CRTAP, variant not shown         Suspected internal deletion, this clone was ignored    
TI_154035838   Gene CRTAP, variant not shown       AAA Suspected internal deletion, this clone was ignored    
TI_159696680   Gene CRTAP, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI