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Gene CRHR2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
60 supporting clones for gene CRHR2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF361106 hippocampus .a 1 to 309 1 to 309   tiling clone,   309/309
(100 %)
0 diff
(100 %id)
U34587   .a 249 to 2360 1 to 2110   tiling clone,   2110/2110
(100 %)
11 diff
(99.5 %id)
D44636 brain .a 1477 to 1758 431 to 151     Submitted on the opposite strand 281/431
(65 %)
0 diff
(100 %id)
AF011406 amygdala .b 1 to 1600 1 to 1600 exact tiling clone,   1600/1600
(100 %)
0 diff
(100 %id)
Y10151 skeletal muscle .b 41 to 336 1 to 296       296/296
(100 %)
0 diff
(100 %id)
DA149606 amygdala .b 991 to 1555 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA808296 brain .c 1 to 572 2 to 573   tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
DA241272 brain .c 174 to 737 2 to 566   capped   565/568
(99 %)
4 diff
(99.3 %id)
CN367943 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 174 to 660 1 to 487       487/487
(100 %)
0 diff
(100 %id)
NM_001883.3   .c 174 to 1866 1 to 1693   RefSeq,   1693/1693
(100 %)
0 diff
(100 %id)
DA210117 brain .c 195 to 774 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
AK313661 amygdala .c 212 to 1653 1 to 1442 W374R     1442/1442
(100 %)
2 diff
(99.9 %id)
DA191234 amygdala .c 213 to 791 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA148028 amygdala .c 243 to 815 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DB167820 kidney, tumor tissue .c 243 to 796 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
CD613210   .c 245 to 552 318 to 3       316/318
(99 %)
19 diff
(94.1 %id)
CD613206   .c 250 to 553 303 to 1       303/303
(100 %)
3 diff
(99.1 %id)
CD613207   .c 250 to 554 1 to 304       304/304
(100 %)
3 diff
(99.1 %id)
CD613208   .c 250 to 551 302 to 1       302/302
(100 %)
2 diff
(99.4 %id)
CD613209   .c 250 to 554 1 to 305       305/305
(100 %)
2 diff
(99.4 %id)
CD613212   .c 250 to 554 1 to 305       305/305
(100 %)
3 diff
(99.1 %id)
CD613213   .c 250 to 552 303 to 1       303/303
(100 %)
3 diff
(99.1 %id)
CD613214   .c 250 to 536 286 to 1       286/286
(100 %)
7 diff
(97.6 %id)
CD613215   .c 250 to 554 1 to 308       308/308
(100 %)
9 diff
(97.1 %id)
CD613216   .c 250 to 553 304 to 1       304/304
(100 %)
2 diff
(99.4 %id)
CD613217   .c 250 to 554 13 to 317       305/317
(96 %)
6 diff
(98.2 %id)
CD613218   .c 250 to 553 304 to 1       304/304
(100 %)
2 diff
(99.4 %id)
CD613219   .c 250 to 554 1 to 305       305/305
(100 %)
2 diff
(99.4 %id)
CD613220   .c 250 to 553 304 to 1       304/304
(100 %)
3 diff
(99.1 %id)
CD613221   .c 250 to 554 1 to 306       306/306
(100 %)
3 diff
(99.1 %id)
CD613222   .c 250 to 553 303 to 1       303/303
(100 %)
3 diff
(99.1 %id)
CD613223   .c 250 to 554 1 to 305       305/305
(100 %)
2 diff
(99.4 %id)
CD613224   .c 250 to 554 1 to 305       305/305
(100 %)
2 diff
(99.4 %id)
CD613226   .c 250 to 554 1 to 309       309/309
(100 %)
6 diff
(98.1 %id)
CD613227   .c 250 to 445 198 to 1       198/201
(98 %)
4 diff
(98.1 %id)
CD613228   .c 250 to 554 1 to 305       305/305
(100 %)
2 diff
(99.4 %id)
CD613229   .c 250 to 554 1 to 305       305/305
(100 %)
2 diff
(99.4 %id)
CO958529 mixed .c 417 to 1055 1 to 634   fully sequenced,   634/634
(100 %)
1 diff
(99.9 %id)
AY449734 brain .c 418 to 1653 1 to 1236       1236/1236
(100 %)
0 diff
(100 %id)
BC096830 G-protein coupled receptors obtained byPCR-directed strategy .c 418 to 1707 10 to 1299   tiling clone,   1290/1299
(99 %)
6 diff
(99.6 %id)
CF147819 mixed .c 418 to 1135 10 to 726       717/727
(98 %)
7 diff
(99.1 %id)
CO958535 mixed .c 1025 to 1654 640 to 20   fully sequenced,   621/640
(97 %)
0 diff
(100 %id)
AF361107 hippocampus .d 1 to 536 1 to 536   tiling clone,   536/536
(100 %)
0 diff
(100 %id)
EU012443   .d 476 to 1708 1 to 1233 R184H tiling clone,   1233/1233
(100 %)
1 diff
(100.0 %id)
AF361108 hippocampus .e 1 to 683 1 to 683   tiling clone,   683/683
(100 %)
0 diff
(100 %id)
AF019381 amygdala .e 491 to 2048 1 to 1558 exact tiling clone,   1558/1558
(100 %)
0 diff
(100 %id)
EU012439   .f 1 to 1347 1 to 1347 R185H tiling clone,   1347/1347
(100 %)
1 diff
(100.0 %id)
EU012442   .g 1 to 1147 1 to 1147 R155H tiling clone,   1147/1147
(100 %)
1 diff
(100.0 %id)
EU012440   .h 1 to 1420 1 to 1420 R185H tiling clone,   1420/1420
(100 %)
1 diff
(100.0 %id)
EU012441   .i 1 to 1436 1 to 1436 R185H tiling clone,   1436/1436
(100 %)
1 diff
(100.0 %id)
DA154321 amygdala .j 1 to 474 2 to 475 exact tiling clone, capped   474/474
(100 %)
0 diff
(100 %id)
DA231461 brain .k 1 to 534 2 to 535 exact tiling clone, capped   534/534
(100 %)
0 diff
(100 %id)
Y10153 skeletal muscle .l 1 to 523 1 to 523 exact tiling clone,   523/523
(100 %)
0 diff
(100 %id)
DB053572 testis .m 1 to 570 2 to 571 S22N tiling clone, capped   570/570
(100 %)
2 diff
(99.7 %id)
CA389998 eye, RPE/choroid .n-u 1 to 491 1 to 491 exact tiling clone,   491/491
(100 %)
0 diff
(100 %id)
AA076869 brain .n-u 139 to 429 291 to 1       291/291
(100 %)
0 diff
(100 %id)
Y10152 skeletal muscle .o 1 to 202 1 to 202 exact tiling clone,   202/202
(100 %)
0 diff
(100 %id)
CD613225   Gene CRHR2, variant not shown         This clone was ignored    
CN367944 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 Gene CRHR2, variant not shown              
DB308619 hippocampus Gene CRHR2, variant not shown              
DA313470 hippocampus Gene CRHR2, variant not shown       capped      
H87790 eye, retina Gene CRHR2, variant not shown       fully sequenced,      
H87844 eye, retina Gene CRHR2, variant not shown       fully sequenced,      
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI