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Gene CREG2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
86 supporting clones for gene CREG2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BG705165 brain, hippocampus .a 1 to 614 8 to 622   tiling clone,   615/622
(98 %)
6 diff
(99.1 %id)
BG036705 brain, hippocampus .a 29 to 774 6 to 749   AAA   744/864
(86 %)
26 diff
(97.0 %id)
AB046109 brain .a 38 to 3208 1 to 3175 exact tiling clone, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 3175/3179
(99 %)
11 diff
(99.7 %id)
DN993146 brain, whole brain .a 113 to 443 1 to 331       331/331
(100 %)
7 diff
(97.9 %id)
BF966119 brain, hippocampus .a 128 to 717 1 to 585       585/585
(100 %)
19 diff
(96.8 %id)
BC032949 Brain, hippocampus .a 130 to 2217 1 to 2088 P96Q tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 2088/2088
(100 %)
3 diff
(99.9 %id)
BC047514 Brain, hippocampus .a 130 to 2217 1 to 2090 P96Q tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 2090/2090
(100 %)
6 diff
(99.8 %id)
NM_153836.3   .a 130 to 3617 1 to 3488 exact RefSeq,   3488/3488
(100 %)
0 diff
(100 %id)
DB476255 hippocampus .a 132 to 593 1 to 462       462/462
(100 %)
4 diff
(99.2 %id)
DB481893 hippocampus .a 132 to 557 1 to 427       427/427
(100 %)
7 diff
(98.4 %id)
DB471542 hippocampus .a 136 to 616 1 to 483       483/499
(96 %)
17 diff
(96.6 %id)
DB480869 hippocampus .a 141 to 616 1 to 476       476/487
(97 %)
3 diff
(99.4 %id)
BI549204 brain, hippocampus .a 159 to 956 1 to 799       799/799
(100 %)
35 diff
(95.7 %id)
TI_44167332   .a 160 to 956 54 to 851       798/851
(93 %)
34 diff
(96.1 %id)
DB506418 hypothalamus .a 170 to 643 1 to 474       474/474
(100 %)
1 diff
(99.8 %id)
AK094970 hippocampus .a 232 to 2217 1 to 1987   tiling clone, available from FLJ,   1987/1987
(100 %)
2 diff
(99.9 %id)
DA296598 hippocampus .a 233 to 711 2 to 480   capped   479/482
(99 %)
2 diff
(99.6 %id)
BG700682 brain, hippocampus .a 241 to 738 147 to 643       497/644
(77 %)
16 diff
(97.6 %id)
CK024221 brain/CNS, Human Brain - Frontal Cortex .a 1249 to 1895 1 to 641       641/695
(92 %)
7 diff
(99.0 %id)
CK004694 brain/CNS, Human Brain - Frontal Cortex .a 1296 to 1786 1 to 488       488/594
(82 %)
49 diff
(91.8 %id)
BF967008 brain, hippocampus .a 1346 to 2182 843 to 17       827/843
(98 %)
0 diff
(100 %id)
BF966862 brain, hippocampus .a 1483 to 2141 684 to 25       660/894
(73 %)
0 diff
(100 %id)
DB545026 hippocampus .a 1717 to 2217 1 to 501     Submitted on the opposite strand 501/501
(100 %)
2 diff
(99.7 %id)
DB550741 hippocampus .a 1732 to 2217 1 to 486     Submitted on the opposite strand 486/486
(100 %)
1 diff
(99.8 %id)
DB307842 hippocampus .a 1753 to 2217 467 to 1       467/467
(100 %)
2 diff
(99.6 %id)
AW135480   .a 1764 to 2217 471 to 18   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 454/454
(100 %)
1 diff
(99.8 %id)
DB545202 hippocampus .a 1767 to 2217 1 to 452     Submitted on the opposite strand 452/452
(100 %)
2 diff
(99.6 %id)
DB549676 hippocampus .a 1780 to 2217 1 to 438     Submitted on the opposite strand 438/438
(100 %)
0 diff
(100 %id)
DB539315 hippocampus .a 1781 to 2217 1 to 441     Submitted on the opposite strand 441/441
(100 %)
17 diff
(96.2 %id)
DB528532 hippocampus .a 1788 to 2217 1 to 429     Submitted on the opposite strand 429/429
(100 %)
9 diff
(98.0 %id)
DB532047 hippocampus .a 1792 to 2217 1 to 427     Submitted on the opposite strand 427/427
(100 %)
6 diff
(98.6 %id)
DB534776 hippocampus .a 1803 to 2217 1 to 415     Submitted on the opposite strand 415/415
(100 %)
2 diff
(99.6 %id)
AW005558 anaplastic oligodendroglioma, brain .a 1874 to 2393 526 to 7   tiling clone,   520/526
(98 %)
0 diff
(100 %id)
DA217511 brain .a 1935 to 2481 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA226725 brain .a 2130 to 2692 2 to 564   capped   563/563
(100 %)
3 diff
(99.5 %id)
DA331805 hippocampus .a 2230 to 2815 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
CN286196 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2263 to 2817 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
CN293886 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2304 to 2461 8 to 165       158/165
(95 %)
6 diff
(96.4 %id)
DA231743 brain .a 2540 to 3099 2 to 561   capped   560/560
(100 %)
4 diff
(99.3 %id)
DA230974 brain .a 2551 to 3093 2 to 545   capped   544/544
(100 %)
4 diff
(99.3 %id)
AA976030 pooled germ cell tumors .a 2580 to 3005 1 to 426     Submitted on the opposite strand 426/426
(100 %)
2 diff
(99.6 %id)
DA412260 thalamus .a 2596 to 3161 2 to 568   capped   567/567
(100 %)
3 diff
(99.5 %id)
DA183174 amygdala .a 2697 to 3252 2 to 559   capped   558/558
(100 %)
4 diff
(99.3 %id)
DA233458 brain .a 2752 to 3334 2 to 584   tiling clone, capped   583/583
(100 %)
5 diff
(99.2 %id)
DA321391 hippocampus .a 3071 to 3617 2 to 548   tiling clone, capped   547/547
(100 %)
4 diff
(99.3 %id)
DA302211 hippocampus .a 3121 to 3688 2 to 569   tiling clone, capped   568/568
(100 %)
4 diff
(99.3 %id)
DA135363 alzheimer cortex .a 3164 to 3705 2 to 544   capped   543/543
(100 %)
7 diff
(98.8 %id)
BG925832 cartilage .a 3219 to 3559 86 to 426       341/361
(94 %)
6 diff
(98.4 %id)
DA301024 hippocampus .a 3412 to 3982 2 to 572   tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
DA299401 hippocampus .a 3562 to 4120 2 to 560   tiling clone, capped   559/559
(100 %)
3 diff
(99.5 %id)
DB176172 kidney, tumor tissue .a 3749 to 4327 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA164274 amygdala .a 3814 to 4387 2 to 575   tiling clone, capped   574/574
(100 %)
4 diff
(99.4 %id)
DA299603 hippocampus .a 4028 to 4600 2 to 575   tiling clone, capped   574/574
(100 %)
2 diff
(99.7 %id)
F06751 brain, total brain .a 4267 to 4585 1 to 319       319/319
(100 %)
0 diff
(100 %id)
T74518 whole brain .a 4268 to 4643 1 to 386       386/532
(72 %)
14 diff
(97.4 %id)
H12213 whole brain .a 4268 to 4685 1 to 417       417/471
(88 %)
10 diff
(97.9 %id)
F12554 brain, total brain .a 4298 to 4564 21 to 272       252/272
(92 %)
6 diff
(97.8 %id)
AW953142   .a 4301 to 4722 1 to 423       423/423
(100 %)
11 diff
(97.4 %id)
DA569074 whole embryo, mainly head .a 4391 to 5262 2 to 877   tiling clone, capped   876/878
(99 %)
21 diff
(97.7 %id)
F07373 brain, total brain .a 4417 to 4652 1 to 236       236/236
(100 %)
0 diff
(100 %id)
R22650 whole brain .a 4418 to 4717 1 to 300       300/300
(100 %)
0 diff
(100 %id)
H17592 whole brain .a 4418 to 4849 1 to 453       453/533
(84 %)
30 diff
(94.4 %id)
DA132998 alzheimer cortex .a 4656 to 5195 2 to 543   capped   542/542
(100 %)
2 diff
(99.7 %id)
DT220263 brain .a 4672 to 5379 1 to 708   tiling clone,   708/708
(100 %)
0 diff
(100 %id)
R35701 whole brain .a 4720 to 5083 1 to 373       373/386
(96 %)
12 diff
(96.9 %id)
DB486897 hypothalamus .a 4757 to 5206 1 to 450       450/450
(100 %)
4 diff
(99.2 %id)
DB492681 hypothalamus .a 4757 to 5224 1 to 469       469/469
(100 %)
4 diff
(99.2 %id)
BF953900 nervous_normal .a 4791 to 5304 14 to 525       512/525
(97 %)
6 diff
(98.9 %id)
DR422308 eye, Pterygium .a 5340 to 5956 1 to 617   tiling clone,   617/620
(99 %)
3 diff
(99.6 %id)
DB355665 whole embryo, mainly head .a 5428 to 5965 537 to 1       537/540
(99 %)
14 diff
(97.5 %id)
BX097529 whole brain .a 5430 to 5979 550 to 1       550/550
(100 %)
0 diff
(100 %id)
DB305502 brain .a 5449 to 5965 517 to 1       517/517
(100 %)
0 diff
(100 %id)
DB556199 hypothalamus .a 5506 to 5965 1 to 461     Submitted on the opposite strand 461/462
(99 %)
8 diff
(98.3 %id)
DB563745 hypothalamus .a 5509 to 5965 1 to 455     Submitted on the opposite strand 455/456
(99 %)
7 diff
(98.5 %id)
H12214 whole brain .a 5532 to 5975 449 to 1       449/449
(100 %)
6 diff
(98.7 %id)
R49337 whole brain .a 5533 to 5973 446 to 1       446/446
(100 %)
8 diff
(98.3 %id)
DB534498 hippocampus .a 5539 to 5965 1 to 426     Submitted on the opposite strand 426/426
(100 %)
1 diff
(99.8 %id)
T88936 whole brain .a 5590 to 5959 378 to 1       378/405
(93 %)
11 diff
(97.3 %id)
R42855 whole brain .a 5590 to 5966 379 to 1       379/448
(84 %)
7 diff
(98.5 %id)
CK024036 brain/CNS, Human Brain - Frontal Cortex .a 5614 to 6226 1 to 611   tiling clone,   611/614
(99 %)
6 diff
(99.1 %id)
F10172 brain, total brain .a 5636 to 5965 330 to 1       330/330
(100 %)
1 diff
(99.7 %id)
CB121702 brain .a 5642 to 5965 1 to 324   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 324/324
(100 %)
0 diff
(100 %id)
F03017 brain, total brain .a 5675 to 5965 291 to 1       291/291
(100 %)
0 diff
(100 %id)
H17484 whole brain .a 5696 to 5967 276 to 1       276/396
(69 %)
4 diff
(99.0 %id)
AA349611 brain .a 5710 to 5965 256 to 1       256/256
(100 %)
0 diff
(100 %id)
F03614 brain, total brain .a 5761 to 5949 189 to 1       189/189
(100 %)
1 diff
(99.5 %id)
DB302317 amygdala .a 5804 to 6123 320 to 1   tiling clone,   320/320
(100 %)
3 diff
(99.1 %id)
DB356668 whole embryo, mainly head .a 6006 to 6420 415 to 1   tiling clone,   415/559
(74 %)
0 diff
(100 %id)
BI599413 brain, hypothalamus .b 1 to 780 1 to 787 P100Q F217I N219E S220C L221H ... tiling clone,   787/787
(100 %)
17 diff
(97.9 %id)
TI_45211543   .b 6 to 780 88 to 869       782/869
(89 %)
17 diff
(98.1 %id)
H09375 whole brain .b 604 to 1146 1 to 552   tiling clone,   552/552
(100 %)
16 diff
(97.2 %id)
BU619510 Cell Line, Chondrosarcoma .b 1529 to 2144 634 to 19   tiling clone, AAA   616/616
(100 %)
1 diff
(99.9 %id)
DB540270 hippocampus .b 1661 to 2144 1 to 484     Submitted on the opposite strand 484/484
(100 %)
0 diff
(100 %id)
DB577717 hypothalamus .b 1663 to 2144 1 to 482     Submitted on the opposite strand 482/482
(100 %)
0 diff
(100 %id)
H09317 whole brain .b 1724 to 2147 441 to 14   tiling clone, AAA   428/428
(100 %)
6 diff
(98.6 %id)
DN993336 brain, whole brain .c 1 to 557 9 to 565 exact tiling clone,   557/565
(98 %)
6 diff
(99.0 %id)
BG678363 skin, squamous cell carcinoma .c 103 to 903 2 to 808   tiling clone,   807/812
(99 %)
36 diff
(95.6 %id)
BF818562 colon_ins .d-u 1 to 469 1 to 480   tiling clone,   480/497
(96 %)
6 diff
(98.8 %id)
BF511764   .e-u 1 to 326 345 to 16 Q2K L4F C9S T21I F25L ... tiling clone, AAA   328/332
(98 %)
15 diff
(95.5 %id)
BG706599 brain, hypothalamus Gene CREG2, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C