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Gene CRB2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
51 supporting clones for gene CRB2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA240339 brain .a 1 to 588 5 to 585   tiling clone, capped   584/584
(100 %)
4 diff
(99.4 %id)
NM_173689.5   .a 1 to 5639 3 to 5641 exact RefSeq,   5641/5641
(100 %)
0 diff
(100 %id)
DA727294   .a 1 to 575 2 to 569   capped   568/568
(100 %)
7 diff
(98.8 %id)
DQ426866 retina .a 53 to 155 1 to 96   tiling clone,   96/96
(100 %)
3 diff
(96.9 %id)
AY720432   .a 91 to 3948 1 to 3858 V709A tiling clone,   3858/3858
(100 %)
1 diff
(100.0 %id)
CN286330 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 981 to 1438 1 to 458       458/458
(100 %)
0 diff
(100 %id)
BF432706 brain, glioblastoma (pooled) .a 2542 to 2994 455 to 3       453/455
(99 %)
2 diff
(99.6 %id)
AK095783 brain .a 3360 to 5632 1 to 2273   tiling clone, available from FLJ,   2273/2273
(100 %)
1 diff
(100.0 %id)
DA528678 brain .a 3361 to 3947 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA194524 amygdala .a 3513 to 4106 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DA362010 subthalamic nucleus .a 3637 to 4191 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
AK124819 caudate nucleus .a 3926 to 5641 1 to 1717   tiling clone, available from FLJ,   1717/1717
(100 %)
1 diff
(100.0 %id)
DA264691 caudate nucleus .a 3927 to 4477 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
TI_151809331   .a 4794 to 5605 79 to 873       795/1005
(79 %)
14 diff
(98.7 %id)
BQ184081 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4999 to 5639 659 to 19   AAA   641/641
(100 %)
2 diff
(99.7 %id)
BF948947 nervous_normal .a 5006 to 5337 16 to 341       326/341
(95 %)
6 diff
(98.3 %id)
BE396243 endometrium, adenocarcinoma cell line, uterus .a 5006 to 5605 30 to 631       602/631
(95 %)
6 diff
(99.1 %id)
AA040818 uterus .a 5027 to 5260 1 to 237   fully sequenced,   237/237
(100 %)
5 diff
(97.9 %id)
AA134134 uterus .a 5027 to 5484 1 to 457       457/458
(99 %)
8 diff
(98.3 %id)
DB306797 caudate nucleus .a 5099 to 5641 543 to 1       543/543
(100 %)
0 diff
(100 %id)
AA040155 uterus .a 5230 to 5639 416 to 1   fully sequenced,   416/416
(100 %)
4 diff
(99.1 %id)
DB317586 brain .a 5425 to 5632 208 to 1       208/208
(100 %)
0 diff
(100 %id)
AK123000   .b 1 to 3658 2 to 3652 A26G E27L R28P A29W A30R ... tiling clone, available from FLJ,   3652/3652
(100 %)
12 diff
(99.7 %id)
AK126775 cerebellum .c 1 to 3946 2 to 3944 T98A V377A T637A G821R L907G ... tiling clone, available from FLJ,   3944/3944
(100 %)
10 diff
(99.8 %id)
DA124238 cerebellum .c 1 to 503 2 to 505   capped   504/506
(99 %)
5 diff
(99.1 %id)
DB300696 cerebellum .c 3369 to 3946 578 to 1       578/578
(100 %)
1 diff
(99.9 %id)
AA349361 brain .c 3606 to 3911 306 to 1       306/306
(100 %)
1 diff
(99.7 %id)
AA721043 synovial sarcoma .c 3670 to 3946 277 to 1       277/277
(100 %)
0 diff
(100 %id)
AA586428 synovial sarcoma .c 3671 to 3947 277 to 1       277/277
(100 %)
0 diff
(100 %id)
AW008664 brain, glioblastoma (pooled) .c 3717 to 3956 240 to 1       240/241
(99 %)
1 diff
(99.6 %id)
AI865442 lymph node, lymphoma, follicular mixed small and largecell .c 3723 to 3957 243 to 9       235/247
(95 %)
0 diff
(100 %id)
BI063722 uterus_tumor .c 3741 to 4141 1 to 401   tiling clone,   401/401
(100 %)
0 diff
(100 %id)
AA931641 carcinoid, lung .c 3743 to 3897 155 to 1       155/155
(100 %)
0 diff
(100 %id)
AI738848 ovary, tumor, 5 pooled (see description) .c 3761 to 3956 213 to 18   AAA   196/196
(100 %)
6 diff
(97.0 %id)
AA927420 pooled germ cell tumors .c 3777 to 3956 180 to 1       180/180
(100 %)
0 diff
(100 %id)
CN415273 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 3835 to 3956 1 to 122   AAA   122/122
(100 %)
2 diff
(98.4 %id)
TI_154003625   .d 1 to 441 517 to 77 F3S T7N V10A A21P F23X ... tiling clone,   441/735
(60 %)
7 diff
(99.1 %id)
BF726292 eye, lens .e-u 1 to 335 1 to 331   tiling clone,   331/331
(100 %)
2 diff
(99.4 %id)
AW965614   .e-u 84 to 272 4 to 189       186/220
(84 %)
6 diff
(97.3 %id)
AA349362 brain .e-u 93 to 498 1 to 402   tiling clone,   402/410
(98 %)
3 diff
(99.3 %id)
BE393160 endometrium, adenocarcinoma cell line, uterus .e-u 168 to 803 1 to 656 D10E W11L S12V A13C F14I ... tiling clone,   656/704
(93 %)
36 diff
(94.9 %id)
BF344465 brain, glioblastoma with EGFR amplification .e-u 255 to 1035 1 to 769 W11G S12L A13H F14S R16A ...     769/925
(83 %)
25 diff
(97.3 %id)
BQ695404 adipose .e-u 327 to 661 1 to 335       335/335
(100 %)
1 diff
(99.8 %id)
BQ695408 adipose .e-u 327 to 769 1 to 443       443/443
(100 %)
3 diff
(99.4 %id)
DT215398 brain .e-u 400 to 891 1 to 491       491/491
(100 %)
1 diff
(99.8 %id)
CN359967 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e-u 450 to 904 11 to 465       455/465
(97 %)
6 diff
(98.8 %id)
BE392023 endometrium, adenocarcinoma cell line, uterus .e-u 471 to 1095 1 to 623   tiling clone,   623/624
(99 %)
8 diff
(98.8 %id)
BF959396 nervous_normal .e-u 605 to 983 51 to 433       383/433
(88 %)
6 diff
(98.7 %id)
BF341621 brain, glioblastoma with EGFR amplification .e-u 616 to 1408 1 to 793   AAA   793/793
(100 %)
25 diff
(96.9 %id)
AL048922 testis .e-u 749 to 1135 1 to 387       387/388
(99 %)
1 diff
(99.8 %id)
CX867791.
matches multiple genes
embryonic stem .e-u 785 to 1409 654 to 30   AAA also hits gene pluroybu 625/625
(100 %)
3 diff
(99.6 %id)
BF822199 kidney_tumor .e-u 925 to 1109 6 to 187       182/191
(95 %)
8 diff
(95.9 %id)
AA708097 pineal gland .e-u 936 to 1410 472 to 1       472/475
(99 %)
3 diff
(99.4 %id)
AW026530 brain, glioblastoma (pooled) .e-u 955 to 1419 465 to 1   tiling clone,   465/465
(100 %)
0 diff
(100 %id)
BF726291 eye, lens .e-u 1001 to 1409 425 to 17   AAA   409/409
(100 %)
0 diff
(100 %id)
AI880330 astrocytoma, brain .e-u 1007 to 1374 368 to 1       368/368
(100 %)
3 diff
(99.2 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI