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Gene CP110TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
296 supporting clones for gene CP110 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BY798911 eye .a 1 to 563 1 to 563   tiling clone,   563/563
(100 %)
0 diff
(100 %id)
DA487415 brain .a 24 to 606 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
CN307904 embryonic stem cells, cell lines H1, H7, andH9 .a 36 to 247 44 to 255       212/255
(83 %)
6 diff
(97.7 %id)
BX952864   .a 42 to 540 1 to 497       497/497
(100 %)
3 diff
(99.4 %id)
DA810042 brain .a 44 to 601 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA337062 hippocampus .a 46 to 624 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
CX785299 human embryonic stem cells .a 53 to 830 1 to 778       778/778
(100 %)
0 diff
(100 %id)
DA752484   .a 53 to 620 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
AL708253 human skeletal muscle .a 65 to 583 1 to 519       519/519
(100 %)
1 diff
(99.9 %id)
BP270868 small intestine .a 73 to 654 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
AL120161 amygdala .a 74 to 543 1 to 470       470/470
(100 %)
0 diff
(100 %id)
CN307905 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 76 to 683 1 to 608       608/608
(100 %)
0 diff
(100 %id)
DA328148 hippocampus .a 82 to 623 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
DA288076 corpus callosum .a 86 to 403 234 to 550   capped   317/549
(57 %)
6 diff
(99.0 %id)
AK300426 placenta .a 88 to 3536 1 to 3449 I252M T560M tiling clone,   3449/3449
(100 %)
4 diff
(99.9 %id)
DA218309 brain .a 89 to 616 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
DA330189 hippocampus .a 89 to 595 2 to 509   capped   508/508
(100 %)
1 diff
(99.9 %id)
DA861890 placenta .a 89 to 641 2 to 556   capped   555/557
(99 %)
3 diff
(99.5 %id)
BX489230   .a 91 to 692 1 to 602       602/602
(100 %)
3 diff
(99.6 %id)
BP358807 mammary gland .a 93 to 676 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
DA104579 cerebellum .a 94 to 650 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA332146 hippocampus .a 94 to 692 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA240896 brain .a 95 to 689 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA314020 hippocampus .a 95 to 652 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
BP199688 brain .a 96 to 682 1 to 587       587/587
(100 %)
3 diff
(99.5 %id)
BP233882 coronary artery .a 96 to 683 2 to 588       587/588
(99 %)
7 diff
(98.9 %id)
DA237370 brain .a 97 to 628 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DA998501   .a 97 to 661 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BP201282 amygdala .a 99 to 679 1 to 582       582/583
(99 %)
3 diff
(99.5 %id)
BP310876 brain .a 100 to 679 1 to 580       580/583
(99 %)
2 diff
(99.7 %id)
BP312112 brain .a 100 to 679 1 to 581       581/583
(99 %)
5 diff
(99.2 %id)
DA108645 cerebellum .a 101 to 679 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA187779 amygdala .a 101 to 641 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA233915 brain .a 101 to 686 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DA234057 brain .a 101 to 672 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA234118 brain .a 101 to 686 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA237581 brain .a 101 to 679 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA248279 brain .a 101 to 689 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DA248309 brain .a 101 to 691 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA330191 hippocampus .a 101 to 655 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA347906 substantia nigra .a 101 to 639 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DA413354 thalamus .a 101 to 653 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA413784 thalamus .a 101 to 643 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
CR749255 fetal kidney .a 101 to 5438 1 to 5342 I252M tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 5342/5342
(100 %)
7 diff
(99.9 %id)
DA842829 placenta .a 101 to 681 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB069722 testis .a 101 to 641 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DB229854 trachea .a 101 to 700 2 to 601   capped   600/600
(100 %)
0 diff
(100 %id)
BP199782 brain .a 102 to 682 1 to 581       581/583
(99 %)
1 diff
(99.9 %id)
DA403182 thalamus .a 102 to 616 2 to 516   capped   515/515
(100 %)
0 diff
(100 %id)
BP311401 brain .a 102 to 699 1 to 598       598/598
(100 %)
11 diff
(98.2 %id)
DA332126 hippocampus .a 103 to 695 2 to 595   capped   594/594
(100 %)
2 diff
(99.7 %id)
DA336946 hippocampus .a 103 to 682 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA338801 hippocampus .a 103 to 689 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
BP361531 thalamus .a 103 to 684 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
DB236634 trachea .a 103 to 686 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
DA210987 brain .a 104 to 667 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DN990239 brain, whole brain .a 104 to 731 1 to 629       629/629
(100 %)
4 diff
(99.4 %id)
DA319859 hippocampus .a 105 to 656 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
CD652126 Embryonic Stem cells .a 121 to 862 12 to 746       735/807
(91 %)
17 diff
(97.9 %id)
BM462895 melanotic melanoma, skin .a 135 to 972 1 to 845       845/1012
(83 %)
14 diff
(98.7 %id)
DA417402 thalamus .a 160 to 726 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA229810 brain .a 167 to 828 2 to 662   capped   661/661
(100 %)
1 diff
(99.9 %id)
AU142871   .a 2489 to 3252 2 to 765   capped   764/764
(100 %)
7 diff
(99.1 %id)
CN307903 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2714 to 3294 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA434749 tongue, tumor tissue .a 2716 to 3234 2 to 523   capped   522/524
(99 %)
9 diff
(98.3 %id)
BG576558 breast, mammary adenocarcinoma, cell line .a 3020 to 3697 1 to 677       677/677
(100 %)
1 diff
(99.9 %id)
CN307908 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 3068 to 3660 1 to 593   tiling clone,   593/593
(100 %)
0 diff
(100 %id)
BF031797 hypernephroma, Kidney .a 3142 to 3812 1 to 661       661/861
(76 %)
28 diff
(96.8 %id)
FN113918 breast carcinoma .a 3170 to 3244 73 to 1     Submitted on the opposite strand 73/78
(93 %)
0 diff
(100 %id)
DA356313 subthalamic nucleus .a 3609 to 4082 2 to 476   capped   475/475
(100 %)
1 diff
(99.8 %id)
BF215615 brain, glioblastoma .a 3676 to 4381 1 to 704       704/820
(85 %)
32 diff
(96.1 %id)
EB386154 eye, optic nerve .a 3694 to 4490 1 to 797       797/797
(100 %)
1 diff
(99.9 %id)
TI_149271220   .a 3728 to 4585 916 to 69       848/1081
(78 %)
0 diff
(100 %id)
AI698739 pooled .a 3786 to 4199 416 to 3       414/416
(99 %)
0 diff
(100 %id)
BP203512 coronary artery .a 3794 to 4383 1 to 590       590/590
(100 %)
5 diff
(99.2 %id)
BU674285 lung, Primary Lung Epithelial Cells .a 3836 to 4582 745 to 1       745/745
(100 %)
7 diff
(99.1 %id)
CK820735 Pancreas, Purified pancreatic islet .a 3952 to 4577 626 to 1     Submitted on the opposite strand 626/626
(100 %)
1 diff
(99.9 %id)
BM800484 leiomyosarcoma, uterus .a 3987 to 4982 12 to 1011       1000/1079
(92 %)
24 diff
(97.8 %id)
BP418306 small intestine .a 4008 to 4467 1 to 460     Submitted on the opposite strand 460/460
(100 %)
1 diff
(99.8 %id)
AU160074   .a 4010 to 4564 554 to 1       554/558
(99 %)
7 diff
(98.8 %id)
AW979089   .a 4035 to 4563 111 to 639   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 529/640
(82 %)
3 diff
(99.6 %id)
AA827980 ovary .a 4046 to 4448 1 to 403       403/403
(100 %)
1 diff
(99.8 %id)
AA828737 ovary .a 4046 to 4306 1 to 261       261/261
(100 %)
2 diff
(99.3 %id)
BI713470 Pancreas, Purified pancreatic islet .a 4105 to 4567 463 to 1       463/463
(100 %)
3 diff
(99.4 %id)
AA513738 breast .a 4115 to 4564 448 to 1       448/448
(100 %)
1 diff
(99.8 %id)
BF036829 adenocarcinoma, ovary .a 4128 to 4564 1 to 437   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 437/437
(100 %)
2 diff
(99.6 %id)
AI245492 Kidney .a 4133 to 4565 433 to 1       433/433
(100 %)
0 diff
(100 %id)
EC474195 Prostate .a 4163 to 4263 14 to 115       102/115
(88 %)
6 diff
(94.8 %id)
AA600205 lung, lung carcinoma .a 4164 to 4564 429 to 29   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 401/401
(100 %)
4 diff
(99.1 %id)
BG610744 adenocarcinoma, Prostate .a 4191 to 4788 1 to 611       611/611
(100 %)
30 diff
(95.1 %id)
BX506008   .a 4192 to 4601 1 to 412       412/412
(100 %)
1 diff
(99.8 %id)
CD511288 Blood vessels - aorta, basilar and artery .a 4252 to 4841 1 to 598       598/717
(83 %)
10 diff
(98.7 %id)
CX167309 human embryonic stem cells differentiated toan early endodermal cell type .a 4304 to 5047 1 to 743       743/743
(100 %)
2 diff
(99.8 %id)
CD300495 testis .a 4412 to 5035 13 to 646       634/957
(66 %)
36 diff
(96.3 %id)
CD677389 eye, Trabecular meshwork .a 4445 to 5041 1 to 597   tiling clone,   597/597
(100 %)
6 diff
(99.0 %id)
DB493028 hypothalamus .a 4476 to 4933 1 to 459       459/459
(100 %)
5 diff
(99.0 %id)
DB504255 hypothalamus .a 4476 to 4959 1 to 484       484/484
(100 %)
2 diff
(99.6 %id)
T18951   .a 4585 to 4908 1 to 328       328/328
(100 %)
4 diff
(98.8 %id)
BU569683 testis .a 4597 to 5252 1 to 660       660/786
(83 %)
9 diff
(98.9 %id)
TI_149306952   .a 4696 to 5438 827 to 87   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 741/914
(81 %)
2 diff
(99.8 %id)
AW021147 cochlea, ear .a 4708 to 5032 1 to 325   fully sequenced,   325/325
(100 %)
0 diff
(100 %id)
BX117661 breast .a 4756 to 5438 1 to 684   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 684/684
(100 %)
2 diff
(99.8 %id)
H44181 breast .a 4756 to 5065 1 to 315   fully sequenced,   315/315
(100 %)
12 diff
(96.2 %id)
BF939130 carcinoid, lung .a 4834 to 5442 623 to 15   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 609/609
(100 %)
1 diff
(99.9 %id)
BM978900 lung, Primary Lung Epithelial Cells .a 4843 to 5438 614 to 19   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 596/596
(100 %)
0 diff
(100 %id)
TI_149276450   .a 4844 to 5442 676 to 79   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 598/899
(66 %)
1 diff
(99.9 %id)
BU677111 lung, Primary Lung Epithelial Cells .a 4844 to 5442 612 to 15   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 598/609
(98 %)
1 diff
(99.9 %id)
AI681371 carcinoid, lung .a 4876 to 5446 573 to 2       572/573
(99 %)
0 diff
(100 %id)
BE465001 carcinoid, lung .a 4924 to 5436 523 to 11       513/523
(98 %)
0 diff
(100 %id)
AI765028 Kidney .a 4959 to 5446 493 to 6       488/493
(98 %)
0 diff
(100 %id)
DB575501 hypothalamus .a 4967 to 5442 1 to 476     Submitted on the opposite strand 476/476
(100 %)
0 diff
(100 %id)
AA625653   .a 4967 to 5446 481 to 2   tiling clone,   480/481
(99 %)
0 diff
(100 %id)
BF108424 carcinoid, lung .a 4969 to 5446 483 to 3       481/483
(99 %)
0 diff
(100 %id)
DB569090 hypothalamus .a 4979 to 5442 1 to 466     Submitted on the opposite strand 466/466
(100 %)
9 diff
(98.1 %id)
AW512972 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 4997 to 5202 206 to 1       206/206
(100 %)
0 diff
(100 %id)
BI492093 cochlea, ear .a 5002 to 5446 445 to 1   fully sequenced,   445/445
(100 %)
0 diff
(100 %id)
BF589922 Kidney .a 5004 to 5439 436 to 1       436/436
(100 %)
0 diff
(100 %id)
DB562428 hypothalamus .a 5024 to 5442 1 to 420     Submitted on the opposite strand 420/420
(100 %)
4 diff
(99.1 %id)
AA987370 carcinoid, lung .a 5028 to 5444 417 to 1       417/417
(100 %)
0 diff
(100 %id)
FN052198 breast carcinoma .a 5037 to 5133 99 to 1     Submitted on the opposite strand 99/99
(100 %)
2 diff
(98.0 %id)
FN065011 breast carcinoma .a 5037 to 5133 97 to 1     Submitted on the opposite strand 97/97
(100 %)
0 diff
(100 %id)
BG941772 blood .a 5052 to 5442 419 to 29   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 391/391
(100 %)
3 diff
(99.3 %id)
AI129176 pooled .a 5057 to 5442 386 to 1       386/386
(100 %)
0 diff
(100 %id)
H44182 breast .a 5063 to 5412 355 to 1   fully sequenced,   355/355
(100 %)
9 diff
(97.5 %id)
AI926004 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 5063 to 5441 380 to 2       379/382
(99 %)
0 diff
(100 %id)
BP193966 brain .a 5070 to 5442 1 to 373   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 373/373
(100 %)
0 diff
(100 %id)
EC472649 Prostate .a 5098 to 5215 14 to 132       119/133
(89 %)
5 diff
(96.3 %id)
N48065 multiple sclerosis lesions .a 5183 to 5442 261 to 1       261/262
(99 %)
16 diff
(93.9 %id)
BQ338668 nervous_normal .a 5187 to 5433 253 to 12       242/253
(95 %)
0 diff
(100 %id)
AA528667 alveolar rhabdomyosarcoma .a 5191 to 5442 1 to 252   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 252/252
(100 %)
4 diff
(98.5 %id)
DA721032   .b 1 to 573 2 to 574   tiling clone, capped   573/573
(100 %)
0 diff
(100 %id)
DA096189 cerebellum .b 2 to 569 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB062286 testis .b 46 to 560 2 to 517   capped   516/516
(100 %)
1 diff
(99.9 %id)
NM_014711.4   .b 47 to 5541 1 to 5495 I252M RefSeq, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 5495/5495
(100 %)
1 diff
(100.0 %id)
DB067312 testis .b 49 to 582 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
DB073143 testis .b 55 to 592 2 to 540   capped   539/539
(100 %)
3 diff
(99.5 %id)
DB064491 testis .b 65 to 646 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DB066383 testis .b 65 to 586 19 to 544   capped   526/526
(100 %)
4 diff
(99.3 %id)
DB073287 testis .b 65 to 594 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DB040412 testis .b 71 to 604 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DB049751 testis .b 71 to 635 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BC036654 testis .b 76 to 5541 1 to 5468 I252M V628F tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 5468/5468
(100 %)
7 diff
(99.9 %id)
BI460345 testis .b 76 to 789 6 to 710       705/710
(99 %)
24 diff
(96.7 %id)
DA092748 cerebellum .b 113 to 634 2 to 526   capped   525/525
(100 %)
5 diff
(99.1 %id)
AL710363 human skeletal muscle .b 123 to 677 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
BP364541 lung .b 127 to 708 1 to 581       581/581
(100 %)
6 diff
(99.0 %id)
DA300578 hippocampus .b 128 to 523 179 to 573   capped   395/572
(69 %)
11 diff
(98.1 %id)
DB241131 trachea .b 130 to 719 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
BX502631 Liver .b 131 to 707 1 to 577       577/577
(100 %)
7 diff
(98.8 %id)
AL710631 human skeletal muscle .b 132 to 452 1 to 321       321/321
(100 %)
2 diff
(99.4 %id)
BP314931 mammary gland .b 132 to 713 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP315909 mammary gland .b 134 to 715 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA239137 brain .b 135 to 704 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
BP357510 mammary gland .b 145 to 727 1 to 583       583/583
(100 %)
5 diff
(99.2 %id)
AB007879 brain .b 146 to 5545 1 to 5399 I252M F347I tiling clone, available from KIAA,   5399/5399
(100 %)
5 diff
(100.0 %id)
BP349739 brain .b 146 to 722 1 to 577       577/582
(99 %)
3 diff
(99.5 %id)
DA226156 brain .b 147 to 548 2 to 403   capped   402/402
(100 %)
1 diff
(99.8 %id)
DB219041 trachea .b 147 to 696 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
DA183643 amygdala .b 149 to 634 2 to 488   capped   487/487
(100 %)
2 diff
(99.6 %id)
DA334687 hippocampus .b 149 to 745 2 to 597   capped   596/596
(100 %)
1 diff
(99.9 %id)
DB095274 testis .b 149 to 720 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
CD625973   .b 161 to 451 30 to 320       291/323
(90 %)
11 diff
(96.6 %id)
CD625974   .b 161 to 450 289 to 1       289/298
(96 %)
8 diff
(97.4 %id)
AI110758 Liver .b 170 to 858 1 to 687       687/688
(99 %)
3 diff
(99.6 %id)
AF074665 Liver .b 170 to 858 1 to 687       687/688
(99 %)
3 diff
(99.6 %id)
BQ423812 leiomyosarcoma, uterus .b 403 to 1290 1 to 889       889/890
(99 %)
18 diff
(98.0 %id)
EL733135 mixed .b 437 to 1091 1 to 655       655/655
(100 %)
1 diff
(99.9 %id)
BM470571 leiomyosarcoma, uterus .b 545 to 1440 25 to 930       906/1121
(80 %)
37 diff
(96.7 %id)
DA386741 thalamus .b 617 to 1188 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB161681 thymus .b 626 to 1210 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA239690 brain .b 715 to 1287 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
BP348626 brain .b 719 to 1300 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA805790 brain .b 750 to 1284 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DA699523   .b 812 to 1331 2 to 522   capped   521/521
(100 %)
2 diff
(99.7 %id)
DA777975 brain .b 851 to 1411 2 to 563   capped   562/562
(100 %)
4 diff
(99.3 %id)
DA507176 brain .b 905 to 1374 2 to 471   capped   470/470
(100 %)
2 diff
(99.6 %id)
BQ213066 melanotic melanoma, skin .b 943 to 1559 1 to 627       627/1070
(58 %)
29 diff
(97.3 %id)
DA215338 brain .b 956 to 1485 2 to 531   capped   530/530
(100 %)
1 diff
(99.9 %id)
CF136010 lymph .b 1018 to 1705 1 to 685       685/697
(98 %)
9 diff
(98.8 %id)
TI_154164794   .b 1025 to 1705 77 to 754       678/782
(86 %)
5 diff
(99.4 %id)
CN307907 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1041 to 1786 1 to 748       748/748
(100 %)
8 diff
(99.0 %id)
DB134953 thymus .b 1152 to 1686 2 to 536   capped   535/535
(100 %)
2 diff
(99.7 %id)
BU561448 testis .b 1179 to 1905 1 to 733       733/773
(94 %)
14 diff
(98.2 %id)
BP360952 thalamus .b 1190 to 1770 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
DA404006 thalamus .b 1192 to 1733 12 to 554   capped   543/553
(98 %)
6 diff
(99.0 %id)
DB080121 testis .b 1216 to 1745 2 to 532   capped   531/534
(99 %)
2 diff
(99.7 %id)
AL705641 human skeletal muscle .b 1247 to 1682 1 to 436       436/436
(100 %)
3 diff
(99.4 %id)
BU596152 mixed (pool of 40 RNAs) .b 1260 to 2089 1 to 835       835/836
(99 %)
17 diff
(98.0 %id)
BQ069545 brain, neuroblastoma, cell line .b 1282 to 2238 1 to 971       971/1056
(91 %)
27 diff
(97.5 %id)
AI909701 breast .b 1351 to 2011 661 to 1       661/662
(99 %)
6 diff
(99.1 %id)
BF917710 uterus_tumor .b 1363 to 1723 382 to 22     Submitted on the opposite strand 361/382
(94 %)
0 diff
(100 %id)
DA215835 brain .b 1496 to 2062 2 to 569   capped   568/568
(100 %)
3 diff
(99.5 %id)
DA803599 brain .b 1499 to 2071 2 to 574   capped   573/573
(100 %)
3 diff
(99.5 %id)
BP217872 caudate nucleus .b 1557 to 2138 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA407068 thalamus .b 1588 to 2122 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
CN307902 embryonic stem cells, cell lines H1, H7, andH9 .b 1633 to 2395 1 to 763       763/763
(100 %)
2 diff
(99.8 %id)
DA410290 thalamus .b 1646 to 2204 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA134624 alzheimer cortex .b 1660 to 2218 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA110350 cerebellum .b 1670 to 2225 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DA210928 brain .b 1674 to 2185 2 to 517   capped   516/518
(99 %)
5 diff
(99.1 %id)
CN307906 embryonic stem cells, cell lines H1, H7, andH9 .b 1693 to 2405 1 to 712       712/712
(100 %)
3 diff
(99.6 %id)
DA120931 cerebellum .b 1718 to 2256 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DB141166 thymus .b 1729 to 2206 2 to 484   capped   483/483
(100 %)
6 diff
(98.8 %id)
AW900180 nervous_normal .b 1741 to 2059 1 to 319       319/319
(100 %)
4 diff
(98.8 %id)
AL043539 testis .b 1878 to 2401 1 to 524       524/524
(100 %)
0 diff
(100 %id)
FN139684 breast carcinoma .b 1955 to 2046 94 to 3     Submitted on the opposite strand 92/98
(93 %)
0 diff
(100 %id)
DW412805 Liver .b 1994 to 2306 10 to 322       313/322
(97 %)
11 diff
(96.6 %id)
DB075709 testis .b 2080 to 2673 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DB097201 testis .b 2086 to 2667 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DA511012 brain .b 2092 to 2671 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA238240 brain .b 2097 to 2689 2 to 597   capped   596/596
(100 %)
5 diff
(99.2 %id)
BE768253 prostate_tumor .b 2110 to 2558 454 to 11       444/457
(97 %)
4 diff
(99.2 %id)
DA747370   .b 2112 to 2665 2 to 556   capped   555/557
(99 %)
4 diff
(99.3 %id)
DA307181 hippocampus .b 2215 to 2684 2 to 471   tiling clone, capped   470/470
(100 %)
0 diff
(100 %id)
DW429075 Liver .b 2258 to 2484 17 to 242   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 226/273
(82 %)
8 diff
(97.1 %id)
BF326617 breast_normal .b 2300 to 2875 11 to 581       571/581
(98 %)
10 diff
(98.3 %id)
AL705235 human skeletal muscle .b 2443 to 3104 1 to 662       662/662
(100 %)
0 diff
(100 %id)
AL705345 human skeletal muscle .b 2443 to 3099 1 to 657       657/657
(100 %)
1 diff
(99.9 %id)
CX785882 human embryonic stem cells .b 2481 to 3267 1 to 787       787/787
(100 %)
2 diff
(99.8 %id)
DA086732 cerebellum .b 2487 to 3071 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
BP241871 Liver .b 2560 to 3131 1 to 573       573/573
(100 %)
5 diff
(99.2 %id)
DR422166 eye, Pterygium .b 2618 to 2776 1 to 159       159/159
(100 %)
3 diff
(98.2 %id)
DA370828 thalamus .b 2625 to 3166 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DB497993 hypothalamus .b 2629 to 3125 1 to 497       497/497
(100 %)
4 diff
(99.2 %id)
DA501993 brain .b 2653 to 3217 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA510343 brain .b 2653 to 3239 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
BP338268 Spleen .b 2664 to 3233 1 to 567       567/567
(100 %)
10 diff
(98.3 %id)
DA269512 caudate nucleus .b 2758 to 3243 2 to 487   capped   486/486
(100 %)
0 diff
(100 %id)
DB107100 thymus .b 2814 to 3384 2 to 573   capped   572/572
(100 %)
5 diff
(99.2 %id)
BF326654 breast_normal .b 2841 to 3034 94 to 287       194/287
(67 %)
6 diff
(98.0 %id)
BQ425942 leiomyosarcoma, uterus .b 2873 to 3712 1 to 842       842/842
(100 %)
3 diff
(99.7 %id)
BF030087 hypernephroma, Kidney .b 3093 to 3688 1 to 598       598/877
(68 %)
25 diff
(97.2 %id)
BE564544 bladder, carcinoma, cell line .b 3173 to 3796 1 to 625       625/755
(82 %)
23 diff
(97.0 %id)
BP250020 hippocampus .b 3231 to 3809 1 to 580       580/587
(98 %)
6 diff
(99.0 %id)
DA667308 esophagus .b 3240 to 3787 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
AU123761   .b 3247 to 4089 2 to 843   capped   842/846
(99 %)
10 diff
(98.9 %id)
BI713730 Pancreas, Purified pancreatic islet .b 3418 to 4015 1 to 598       598/598
(100 %)
2 diff
(99.7 %id)
DN949464 Pancreas, Purified pancreatic islet .b 3420 to 3875 45 to 500     Submitted on the opposite strand 456/500
(91 %)
6 diff
(98.8 %id)
EH347967   .b 3449 to 3525 1 to 78       78/78
(100 %)
1 diff
(98.8 %id)
DA143177 alzheimer cortex .b 3641 to 4203 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA250590 caudate nucleus .b 3683 to 4229 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
AA312040   .c 1 to 360 1 to 361 E4X D93G N94* tiling clone,   361/361
(100 %)
1 diff
(99.8 %id)
BE737587 brain, glioblastoma .d 1 to 599 1 to 583 A89V I90S L91F S92L P93H ... tiling clone,   583/848
(68 %)
20 diff
(97.7 %id)
DB285978 uterus .e 1 to 544 2 to 545 exact tiling clone, capped   544/544
(100 %)
0 diff
(100 %id)
BX644254   .e 62 to 593 1 to 532 exact tiling clone,   532/532
(100 %)
1 diff
(99.9 %id)
DA247439 brain .e 72 to 660 2 to 593 L47X S48V L49A P50A S51L ... capped   592/593
(99 %)
3 diff
(99.5 %id)
DA321710 hippocampus .e 72 to 629 2 to 560 exact capped   559/559
(100 %)
1 diff
(99.9 %id)
TI_57184156   .e 82 to 733 33 to 690 D5G G43W N44E Q45P A46S ... AAA   658/856
(76 %)
25 diff
(97.1 %id)
BC030223 Lung, Spleen, fetal, pooled .e 84 to 2598 1 to 2516 exact tiling clone, available from MGC, AAA   2516/2516
(100 %)
3 diff
(99.9 %id)
BI770792 pooled lung and spleen .e 84 to 733 1 to 656 D5G G43W N44E Q45P A46S ... available from MGC,   656/830
(79 %)
21 diff
(97.5 %id)
BG433137 Kidney .e 793 to 1558 1 to 769   available from MGC,   769/769
(100 %)
11 diff
(98.6 %id)
BC034140 Kidney .e 794 to 1659 1 to 866   tiling clone, available from MGC, AAA   866/866
(100 %)
1 diff
(99.9 %id)
AV752975 Pituitary .e 1404 to 2034 1 to 625       625/737
(84 %)
16 diff
(97.9 %id)
FN177550 breast carcinoma .e 2289 to 2402 113 to 1     Submitted on the opposite strand 113/113
(100 %)
1 diff
(99.2 %id)
FN085345 breast carcinoma .e 2290 to 2402 112 to 1     Submitted on the opposite strand 112/112
(100 %)
3 diff
(97.4 %id)
BF834105 head_neck .f-u 1 to 495 18 to 512   tiling clone,   495/512
(96 %)
6 diff
(98.9 %id)
DA311571 hippocampus .f-u 117 to 667 2 to 552   to resequence, capped   551/551
(100 %)
1 diff
(99.9 %id)
BF830689 head_neck .f-u 157 to 686 539 to 11     Submitted on the opposite strand 529/539
(98 %)
0 diff
(100 %id)
DA232562 brain .f-u 208 to 768 2 to 562   tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
DA121842 cerebellum .f-u 305 to 859 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA108070 cerebellum .f-u 309 to 869 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
AL119036 amygdala .f-u 666 to 1309 1 to 644   tiling clone,   644/644
(100 %)
0 diff
(100 %id)
BQ720815 sympathetic trunk .f-u 2005 to 2919 1 to 923 exact tiling clone,   923/924
(99 %)
16 diff
(98.3 %id)
BX502433 Liver .f-u 2025 to 2625 1 to 602 R22M L33*     602/602
(100 %)
10 diff
(98.4 %id)
BG541885 lung .f-u 2225 to 3036 1 to 816 Q10K M11C L12C R13D Q14N ...     816/914
(89 %)
19 diff
(98.0 %id)
DA261386 caudate nucleus .f-u 2304 to 2858 2 to 558 exact capped   557/557
(100 %)
3 diff
(99.5 %id)
DA299586 hippocampus .f-u 2463 to 3044 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
BP430906   .f-u 2464 to 2858 1 to 395       395/395
(100 %)
3 diff
(99.3 %id)
BQ632809 Pancreas, Purified pancreatic islet .f-u 2487 to 3095 1 to 609   tiling clone,   609/609
(100 %)
0 diff
(100 %id)
BF210180 bone marrow, from chronic myelogenous leukemia .f-u 2517 to 3225 1 to 702   tiling clone,   702/858
(81 %)
11 diff
(98.8 %id)
AA373285 lung .f-u 2538 to 2906 1 to 372       372/372
(100 %)
5 diff
(98.7 %id)
AW957468   .f-u 2539 to 3060 1 to 523       523/524
(99 %)
6 diff
(98.9 %id)
R09790 liver and spleen .f-u 2626 to 2910 1 to 297       297/298
(99 %)
14 diff
(95.4 %id)
DB308485 hippocampus .f-u 3149 to 3700 553 to 1   to resequence,   553/564
(98 %)
3 diff
(99.5 %id)
BQ632514 Pancreas, Purified pancreatic islet .f-u 3153 to 3703 551 to 1   tiling clone,   551/551
(100 %)
0 diff
(100 %id)
R12380 liver and spleen .f-u 3341 to 3702 379 to 1       379/422
(89 %)
25 diff
(94.1 %id)
DA318348 hippocampus .g 1 to 571 2 to 572   tiling clone, capped   571/575
(99 %)
4 diff
(99.4 %id)
DB154408 thymus .g 77 to 677 2 to 603   tiling clone, capped   602/602
(100 %)
1 diff
(99.9 %id)
BP195766 brain .g 569 to 1150 1 to 581 H48R R54I P71S L77F F81L tiling clone,   581/583
(99 %)
16 diff
(97.3 %id)
AK309196 thalamus .g 580 to 1882 1 to 1303 exact tiling clone,   1303/1303
(100 %)
1 diff
(100.0 %id)
DA395556 thalamus .g 581 to 1158 2 to 579 exact capped   578/578
(100 %)
1 diff
(99.9 %id)
DB168605 kidney, tumor tissue .g 676 to 1249 2 to 575 exact capped   574/574
(100 %)
1 diff
(99.9 %id)
DB308936 hippocampus .g 1640 to 2199 562 to 1   tiling clone,   562/562
(100 %)
4 diff
(99.3 %id)
DA397504 thalamus .h 1 to 587 2 to 589   tiling clone, capped   588/588
(100 %)
2 diff
(99.7 %id)
BX643257   .h 468 to 1265 1 to 794 exact tiling clone,   794/794
(100 %)
5 diff
(99.4 %id)
EB387551 eye, optic nerve .i 1 to 818 1 to 818 exact tiling clone,   818/818
(100 %)
0 diff
(100 %id)
BP357008 mammary gland .j 1 to 584 1 to 582 exact tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
DA505036 brain .j 19 to 491 2 to 477 E25* tiling clone, capped   476/476
(100 %)
3 diff
(99.4 %id)
DB123972 thymus .j 170 to 735 2 to 567   tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
AL710157 human skeletal muscle .k 1 to 674 1 to 675 exact tiling clone,   675/675
(100 %)
2 diff
(99.8 %id)
DA130607 alzheimer cortex .k 17 to 583 2 to 568 exact tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
DA138241 alzheimer cortex .k 17 to 560 2 to 545 exact capped   544/544
(100 %)
0 diff
(100 %id)
DA140229 alzheimer cortex .k 19 to 565 2 to 548 exact capped   547/547
(100 %)
0 diff
(100 %id)
DB219036 trachea .k 19 to 567 2 to 552 L77S capped   551/551
(100 %)
2 diff
(99.7 %id)
BP394428 pancreatic islet .l-u 1 to 500 500 to 1 exact tiling clone,   500/500
(100 %)
0 diff
(100 %id)
AL596947   Gene CP110, variant not shown              
AV722101 hypothalamus Gene CP110, variant not shown         Suspected internal deletion, this clone was ignored    
H17617 whole brain Gene CP110, variant not shown              
H17728 whole brain Gene CP110, variant not shown              
BU929746 placenta Gene CP110, variant not shown         This clone was ignored    
AV746886 Pituitary Gene CP110, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
DB365785   Gene CP110, variant not shown         This clone was ignored    
AU128611   Gene CP110, variant not shown       capped This clone was ignored    
DB090993 testis Gene CP110, variant not shown       capped This clone was ignored    
DB148888 thymus Gene CP110, variant not shown       capped This clone was ignored    
DB345955 thymus Gene CP110, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h, .i, .j, .k, .l-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI