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Gene COX5BTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
455 supporting clones for gene COX5B back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BF061790 pooled germ cell tumors .a 1 to 505 505 to 1   tiling clone,   505/505
(100 %)
0 diff
(100 %id)
AW296918   .a 39 to 504 466 to 1       466/466
(100 %)
3 diff
(99.4 %id)
AW298397   .a 79 to 504 426 to 1       426/426
(100 %)
0 diff
(100 %id)
CD174552 embryonic stem cells, WA01, passage 38 .a 369 to 898 15 to 544   AAA   530/544
(97 %)
8 diff
(98.6 %id)
CB994364 placenta, pre-eclamptic placenta .a 379 to 898 28 to 547   AAA   520/547
(95 %)
6 diff
(99.0 %id)
AA305079 colon .a 389 to 764 1 to 375       375/375
(100 %)
4 diff
(99.0 %id)
BI544551 brain, hippocampus .a 390 to 898 1 to 509   AAA   509/509
(100 %)
5 diff
(99.1 %id)
BI548600 brain, hippocampus .a 391 to 898 1 to 506   AAA   506/506
(100 %)
10 diff
(98.1 %id)
BQ961762 epithelioid carcinoma cell line, Pancreas .a 393 to 899 1 to 507   AAA   507/507
(100 %)
2 diff
(99.7 %id)
BI666822 brain, hypothalamus .a 394 to 898 1 to 500   AAA   500/500
(100 %)
11 diff
(97.8 %id)
TI_44000505   .a 395 to 898 127 to 630   AAA   504/630
(80 %)
6 diff
(99.1 %id)
BI770162 pooled lung and spleen .a 396 to 497 1 to 101       101/101
(100 %)
2 diff
(98.1 %id)
TI_44167103   .a 396 to 898 96 to 596   AAA   501/596
(84 %)
9 diff
(98.5 %id)
BC006229 Skin, melanotic melanoma. .a 397 to 900 1 to 504   available from MGC, AAA   504/504
(100 %)
0 diff
(100 %id)
AV646868 corresponding non cancerous liver tissue .a 397 to 814 1 to 418     Submitted on the opposite strand 418/418
(100 %)
1 diff
(99.8 %id)
BI601797 brain, hypothalamus .a 397 to 900 1 to 504   AAA   504/504
(100 %)
6 diff
(98.9 %id)
NM_001862.2   .a 397 to 900 1 to 504   RefSeq, AAA   504/504
(100 %)
0 diff
(100 %id)
DB489729 hypothalamus .a 398 to 862 1 to 465       465/465
(100 %)
1 diff
(99.8 %id)
DB497908 hypothalamus .a 398 to 889 1 to 492       492/492
(100 %)
0 diff
(100 %id)
BI767521 pooled lung and spleen .a 398 to 497 1 to 97       97/97
(100 %)
4 diff
(95.9 %id)
TI_44343015   .a 398 to 898 141 to 636   AAA   496/636
(77 %)
10 diff
(98.5 %id)
BP871226 embryonal kidney .a 401 to 732 1 to 332       332/332
(100 %)
0 diff
(100 %id)
DB494953 hypothalamus .a 401 to 888 1 to 488       488/488
(100 %)
3 diff
(99.4 %id)
CB106869 Liver .a 401 to 900 1 to 499   AAA   499/499
(100 %)
1 diff
(99.8 %id)
CB109141 Liver .a 401 to 840 1 to 440       440/440
(100 %)
1 diff
(99.8 %id)
CB109633 Liver .a 401 to 892 1 to 492       492/492
(100 %)
1 diff
(99.8 %id)
CB110753 Liver .a 401 to 903 1 to 503   tiling clone,   503/509
(98 %)
1 diff
(99.9 %id)
BG705709 brain, hypothalamus .a 402 to 898 1 to 496   AAA   496/496
(100 %)
7 diff
(98.6 %id)
BG713975 brain, hypothalamus .a 402 to 898 1 to 497   AAA   497/497
(100 %)
6 diff
(98.8 %id)
BF812924 colon_ins .a 403 to 899 11 to 506       496/510
(97 %)
10 diff
(98.1 %id)
CF130754 Chondrosarcoma Lung Metastasis cell lines, lung .a 403 to 898 43 to 538   AAA   496/538
(92 %)
6 diff
(98.9 %id)
BP308301 brain .a 403 to 901 1 to 499       499/552
(90 %)
2 diff
(99.7 %id)
TI_154022218   .a 403 to 900 580 to 83   AAA   498/1181
(42 %)
0 diff
(100 %id)
TI_154033299   .a 403 to 900 584 to 87   AAA   498/919
(54 %)
0 diff
(100 %id)
TI_154192773   .a 403 to 898 93 to 588   AAA   496/538
(92 %)
6 diff
(98.9 %id)
CA438895 lung, Metastatic Chondrosarcoma .a 403 to 900 514 to 17   AAA   498/526
(94 %)
0 diff
(100 %id)
CA443269 lung, Metastatic Chondrosarcoma .a 403 to 900 514 to 17   AAA   498/527
(94 %)
0 diff
(100 %id)
EL947802 eyeball .a 404 to 898 1 to 495   AAA   495/495
(100 %)
2 diff
(99.6 %id)
BU954485 mixed (pool of 40 RNAs) .a 404 to 900 1 to 497       497/534
(93 %)
4 diff
(99.3 %id)
TI_45211356   .a 404 to 900 120 to 616   AAA   497/616
(80 %)
7 diff
(98.9 %id)
BI560899 testis .a 405 to 898 1 to 494   AAA   494/494
(100 %)
5 diff
(99.0 %id)
AL038054 Kidney .a 407 to 692 66 to 353       288/353
(81 %)
9 diff
(97.5 %id)
BM808163 amelanotic melanoma, cell line, skin .a 407 to 901 24 to 518   AAA   495/564
(87 %)
5 diff
(99.2 %id)
BM768285 stomach .a 407 to 900 1 to 494       494/494
(100 %)
0 diff
(100 %id)
BX500095 Liver .a 408 to 900 1 to 493   AAA   493/493
(100 %)
5 diff
(99.0 %id)
BG702888 brain, hippocampus .a 408 to 898 1 to 491   AAA   491/491
(100 %)
5 diff
(99.0 %id)
DB489886 hypothalamus .a 409 to 762 1 to 354       354/354
(100 %)
22 diff
(93.8 %id)
BI669396 brain, hypothalamus .a 409 to 898 8 to 495   AAA   488/495
(98 %)
8 diff
(98.4 %id)
TI_44345953   .a 409 to 898 89 to 576   AAA   488/576
(84 %)
8 diff
(98.7 %id)
BM850300 stomach .a 409 to 900 1 to 492       492/492
(100 %)
3 diff
(99.4 %id)
CD176509 embryonic trophoblasts, made from WA01 stemcells .a 410 to 900 23 to 513   AAA   491/513
(95 %)
6 diff
(98.9 %id)
BU845863 ovary, teratocarcinoma, cell line .a 410 to 906 16 to 511       496/1024
(48 %)
9 diff
(99.2 %id)
TI_44349136   .a 410 to 898 89 to 577   AAA   489/577
(84 %)
6 diff
(99.0 %id)
DB569004 hypothalamus .a 411 to 900 1 to 490     Submitted on the opposite strand 490/490
(100 %)
1 diff
(99.8 %id)
AL598599   .a 412 to 900 1 to 489   AAA   489/489
(100 %)
1 diff
(99.8 %id)
DB503834 hypothalamus .a 412 to 890 1 to 479       479/479
(100 %)
2 diff
(99.6 %id)
AA132572 colon, tumor .a 412 to 733 1 to 312   fully sequenced,   312/312
(100 %)
10 diff
(96.8 %id)
BG572413 placenta .a 412 to 901 1 to 489       489/831
(58 %)
3 diff
(99.7 %id)
BF756446 colon .a 413 to 704 17 to 311       295/360
(81 %)
15 diff
(95.9 %id)
C02892 heart .a 413 to 765 1 to 354       354/354
(100 %)
15 diff
(95.8 %id)
CD174862 embryonic stem cells, WA01, passage 38 .a 413 to 900 27 to 514   AAA   488/514
(94 %)
7 diff
(98.7 %id)
CD384948 embryonic trophoblasts, made from WA01 stemcells .a 413 to 900 23 to 510   AAA   488/510
(95 %)
6 diff
(98.9 %id)
EL950828 eyeball .a 413 to 884 1 to 472       472/472
(100 %)
2 diff
(99.6 %id)
DB506075 hypothalamus .a 413 to 899 1 to 487       487/494
(98 %)
1 diff
(99.8 %id)
BM912880 amelanotic melanoma, cell line, skin .a 413 to 781 1 to 369       369/1405
(26 %)
14 diff
(99.1 %id)
BM767022 stomach .a 413 to 900 1 to 488       488/488
(100 %)
0 diff
(100 %id)
BG706613 brain, hypothalamus .a 414 to 898 30 to 513   AAA   484/513
(94 %)
8 diff
(98.5 %id)
TI_149315682   .a 414 to 898 571 to 87   AAA   485/952
(50 %)
0 diff
(100 %id)
CB306467 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 414 to 898 503 to 19   AAA   485/493
(98 %)
0 diff
(100 %id)
CA423198 cell lines, Chondrosarcoma .a 414 to 898 503 to 19   AAA   485/494
(98 %)
9 diff
(98.2 %id)
BM272875 insulinoma, Pancreas .a 415 to 845 1 to 431       431/431
(100 %)
4 diff
(99.1 %id)
EL949688 eyeball .a 415 to 901 1 to 486       486/539
(90 %)
2 diff
(99.7 %id)
CK905073 insulinoma, Pancreas .a 415 to 900 1 to 486   fully sequenced, AAA   486/486
(100 %)
4 diff
(99.2 %id)
BG944359 blood .a 416 to 873 1 to 458       458/458
(100 %)
1 diff
(99.8 %id)
BG982346 colon_normal .a 416 to 601 1 to 191       191/191
(100 %)
14 diff
(92.7 %id)
BF026149 melanotic melanoma, skin .a 416 to 899 1 to 483       483/483
(100 %)
1 diff
(99.8 %id)
BP432870   .a 416 to 662 1 to 248       248/248
(100 %)
4 diff
(98.4 %id)
AA314983 colon .a 417 to 895 10 to 488       479/493
(97 %)
7 diff
(98.6 %id)
AV708579 adrenal gland .a 417 to 835 1 to 419       419/419
(100 %)
0 diff
(100 %id)
CA437685 lung, Metastatic Chondrosarcoma .a 417 to 900 500 to 17   AAA   484/492
(98 %)
0 diff
(100 %id)
AA369116 placenta .a 418 to 614 1 to 196       196/196
(100 %)
2 diff
(99.0 %id)
BG982880 colon_normal .a 418 to 888 482 to 12       471/483
(97 %)
6 diff
(98.8 %id)
EL946416 eyeball .a 418 to 900 1 to 473   AAA   476/473
(100 %)
15 diff
(96.9 %id)
EL948300 eyeball .a 418 to 891 1 to 474       474/474
(100 %)
8 diff
(98.4 %id)
DB572413 hypothalamus .a 418 to 898 1 to 481     Submitted on the opposite strand 481/481
(100 %)
1 diff
(99.8 %id)
M19961   .a 418 to 898 14 to 494       481/481
(100 %)
5 diff
(99.0 %id)
EL952853 eyeball .a 419 to 900 1 to 481   AAA   481/481
(100 %)
4 diff
(99.2 %id)
DB484237 hypothalamus .a 419 to 861 1 to 444       444/444
(100 %)
5 diff
(98.9 %id)
DB488645 hypothalamus .a 419 to 877 1 to 460       460/460
(100 %)
4 diff
(99.2 %id)
DB497203 hypothalamus .a 419 to 895 1 to 477       477/477
(100 %)
2 diff
(99.6 %id)
DB501224 hypothalamus .a 419 to 899 1 to 481       481/487
(98 %)
2 diff
(99.6 %id)
DB575076 hypothalamus .a 419 to 898 1 to 480     Submitted on the opposite strand 480/480
(100 %)
2 diff
(99.6 %id)
BG478465 melanotic melanoma, skin .a 419 to 900 1 to 483   AAA   483/483
(100 %)
1 diff
(99.8 %id)
BM510996 insulinoma, Pancreas .a 419 to 840 8 to 429       422/429
(98 %)
6 diff
(98.7 %id)
BU856596 ovary, teratocarcinoma, cell line .a 419 to 898 38 to 515   AAA   478/515
(92 %)
6 diff
(98.9 %id)
TI_154124396   .a 419 to 900 551 to 70   AAA   482/959
(50 %)
0 diff
(100 %id)
BM695447 eye, optic nerve .a 419 to 898 1 to 480   fully sequenced, AAA   480/480
(100 %)
0 diff
(100 %id)
AV692746 hepatocellular carcinoma .a 420 to 826 1 to 405       405/410
(98 %)
3 diff
(99.3 %id)
BQ682165 melanotic melanoma, cell line, skin .a 420 to 898 1 to 479   AAA   479/479
(100 %)
0 diff
(100 %id)
BU163033 melanotic melanoma, cell line, skin .a 420 to 898 1 to 479   AAA   479/479
(100 %)
0 diff
(100 %id)
BU849188 ovary, teratocarcinoma, cell line .a 420 to 900 1 to 481   AAA   481/481
(100 %)
0 diff
(100 %id)
EC489754 Prostate .a 421 to 521 1 to 101       101/102
(99 %)
5 diff
(95.1 %id)
EC533723 Prostate .a 421 to 519 1 to 99       99/99
(100 %)
0 diff
(100 %id)
EC578301 Prostate .a 421 to 519 1 to 99       99/99
(100 %)
0 diff
(100 %id)
AV728864 hypothalamus .a 421 to 900 1 to 480   AAA   480/480
(100 %)
1 diff
(99.8 %id)
BQ686303 ductal carcinoma, cell line, Pancreas .a 421 to 900 1 to 480   AAA   480/480
(100 %)
0 diff
(100 %id)
BU174506 melanotic melanoma, cell line, skin .a 421 to 898 26 to 503   AAA   478/503
(95 %)
6 diff
(98.9 %id)
AA310770   .a 422 to 763 1 to 346       346/346
(100 %)
7 diff
(98.0 %id)
AA328877   .a 422 to 669 1 to 249       249/249
(100 %)
3 diff
(98.8 %id)
CB267209 adipose .a 422 to 900 1 to 479   AAA   479/479
(100 %)
4 diff
(99.2 %id)
EC565771 Prostate .a 422 to 519 1 to 95       95/95
(100 %)
3 diff
(96.9 %id)
EL949225 eyeball .a 422 to 900 1 to 480   AAA   480/480
(100 %)
7 diff
(98.6 %id)
AV692494 hepatocellular carcinoma .a 422 to 898 1 to 477   AAA   477/477
(100 %)
0 diff
(100 %id)
AI248188 liver and spleen .a 423 to 899 480 to 4       477/480
(99 %)
3 diff
(99.4 %id)
BI757661 brain .a 423 to 497 1 to 74       74/74
(100 %)
1 diff
(98.7 %id)
AV748099 Pituitary .a 423 to 826 1 to 402       402/415
(96 %)
6 diff
(98.6 %id)
EC461338 Prostate .a 424 to 521 1 to 97       97/98
(98 %)
3 diff
(97.0 %id)
EC520297 Prostate .a 424 to 521 1 to 98       98/99
(98 %)
2 diff
(98.0 %id)
EC557815 Prostate .a 424 to 515 15 to 109       95/109
(87 %)
6 diff
(94.5 %id)
AA196060 muscle, skeletal muscle .a 424 to 877 1 to 470       470/487
(96 %)
36 diff
(92.7 %id)
AA130801 colon, tumor .a 425 to 899 1 to 477   fully sequenced,   477/477
(100 %)
26 diff
(94.6 %id)
BI497003 cochlea, ear .a 425 to 900 8 to 483   AAA   476/483
(98 %)
6 diff
(98.8 %id)
BG758231 B-cells, primary B-cells from tonsils (cell line) .a 425 to 814 1 to 390       390/390
(100 %)
1 diff
(99.8 %id)
AA314042 colon .a 426 to 895 1 to 468       468/473
(98 %)
3 diff
(99.4 %id)
AA369581 placenta .a 426 to 694 1 to 270       270/270
(100 %)
10 diff
(96.3 %id)
AA374852 lung .a 426 to 769 1 to 343       343/343
(100 %)
7 diff
(98.0 %id)
BG982340 colon_normal .a 426 to 888 487 to 23       465/487
(95 %)
5 diff
(99.0 %id)
BT006742   .a 426 to 813 1 to 388       388/390
(99 %)
2 diff
(99.5 %id)
CR541727   .a 426 to 815 1 to 390       390/390
(100 %)
1 diff
(99.8 %id)
CR541753   .a 426 to 812 1 to 387       387/387
(100 %)
1 diff
(99.8 %id)
CV026772 mixed .a 426 to 821 1 to 396       396/561
(70 %)
4 diff
(99.3 %id)
BE314835 brain, neuroblastoma .a 426 to 901 25 to 499       475/652
(72 %)
9 diff
(98.7 %id)
BI761203 pooled colon, kidney, stomach .a 426 to 497 1 to 71       71/71
(100 %)
2 diff
(97.2 %id)
BI752855 brain .a 426 to 497 1 to 71       71/71
(100 %)
1 diff
(98.6 %id)
BQ879221 ductal carcinoma, cell line, Pancreas .a 426 to 901 1 to 476       476/480
(99 %)
1 diff
(99.8 %id)
BI755569 brain .a 427 to 497 1 to 70       70/70
(100 %)
1 diff
(98.6 %id)
BQ681373 melanotic melanoma, cell line, skin .a 427 to 900 1 to 474   AAA   474/474
(100 %)
0 diff
(100 %id)
EL952804 eyeball .a 428 to 835 1 to 392       395/392
(100 %)
19 diff
(95.2 %id)
DB568256 hypothalamus .a 428 to 898 1 to 471     Submitted on the opposite strand 471/471
(100 %)
1 diff
(99.8 %id)
AA362828 ovary .a 429 to 735 1 to 304       304/304
(100 %)
9 diff
(97.1 %id)
AV683391 hepatocellular carcinoma .a 429 to 834 1 to 404       404/404
(100 %)
9 diff
(97.8 %id)
AA295588 Pancreas .a 430 to 723 1 to 294       294/294
(100 %)
4 diff
(98.7 %id)
AA380096 skin .a 430 to 673 1 to 243       243/243
(100 %)
1 diff
(99.6 %id)
AA384948 thyroid gland .a 430 to 729 1 to 299       299/299
(100 %)
1 diff
(99.7 %id)
EC517118 Prostate .a 430 to 523 8 to 98       91/98
(92 %)
6 diff
(93.9 %id)
BE276681 melanotic melanoma, skin .a 430 to 899 1 to 471       471/617
(76 %)
7 diff
(98.9 %id)
BI769574 pooled lung and spleen .a 430 to 497 1 to 68       68/68
(100 %)
0 diff
(100 %id)
AA371347 pituitary gland .a 431 to 636 1 to 205       205/205
(100 %)
1 diff
(99.6 %id)
EL947067 eyeball .a 431 to 898 40 to 506   AAA   467/506
(92 %)
7 diff
(98.7 %id)
BU070526 insulinoma, Pancreas .a 431 to 900 486 to 17   AAA   470/472
(99 %)
0 diff
(100 %id)
AA341628 Kidney .a 432 to 696 1 to 264       264/264
(100 %)
2 diff
(99.3 %id)
EL946650 eyeball .a 432 to 898 1 to 467   AAA   467/467
(100 %)
4 diff
(99.2 %id)
BQ673579 epidermoid carcinoma, cell line, salivary gland .a 432 to 898 1 to 467   AAA   467/467
(100 %)
0 diff
(100 %id)
BE392835 endometrium, adenocarcinoma cell line, uterus .a 433 to 884 1 to 454       454/454
(100 %)
3 diff
(99.4 %id)
T95493 liver and spleen .a 434 to 756 1 to 328       328/333
(98 %)
21 diff
(93.7 %id)
AA308336 colon .a 435 to 898 8 to 471       464/471
(98 %)
7 diff
(98.6 %id)
AA780029 liver and spleen .a 435 to 900 478 to 14   AAA   465/465
(100 %)
15 diff
(96.8 %id)
AA576038 breast, breast tumor .a 435 to 892 457 to 1       457/457
(100 %)
6 diff
(98.7 %id)
AA318145 retina .a 436 to 649 1 to 212       212/212
(100 %)
2 diff
(99.1 %id)
AA095370   .a 437 to 707 1 to 268       268/280
(95 %)
16 diff
(94.3 %id)
C03075 heart .a 437 to 658 1 to 222       222/222
(100 %)
6 diff
(97.3 %id)
CA405584 adipose .a 437 to 899 8 to 469   AAA   462/469
(98 %)
9 diff
(98.1 %id)
AA295280 Bone .a 438 to 696 25 to 280       256/280
(91 %)
6 diff
(97.9 %id)
EC473376 Prostate .a 438 to 530 1 to 94       94/95
(98 %)
4 diff
(95.8 %id)
BM272626 insulinoma, Pancreas .a 439 to 900 477 to 16   AAA   462/462
(100 %)
0 diff
(100 %id)
EC457787 Prostate .a 439 to 531 1 to 93       93/93
(100 %)
0 diff
(100 %id)
EC574976 Prostate .a 439 to 530 1 to 91       91/91
(100 %)
5 diff
(94.6 %id)
AA303458 aorta .a 440 to 673 1 to 233       233/233
(100 %)
2 diff
(99.2 %id)
BE794957 lung, small cell carcinoma .a 440 to 900 1 to 461   AAA   461/461
(100 %)
0 diff
(100 %id)
BE311754 Kidney, renal cell adenocarcinoma .a 441 to 900 1 to 458   AAA   458/458
(100 %)
2 diff
(99.6 %id)
BE733914 choriocarcinoma, placenta .a 441 to 900 1 to 460   AAA   460/460
(100 %)
0 diff
(100 %id)
BI758139 brain .a 441 to 497 1 to 56       56/56
(100 %)
1 diff
(98.3 %id)
TI_151769698   .a 441 to 900 106 to 565   fully sequenced, AAA   460/460
(100 %)
3 diff
(99.4 %id)
AA147330   .a 442 to 857 1 to 418       418/418
(100 %)
40 diff
(90.5 %id)
AW328547 cervix .a 442 to 887 1 to 446   AAA   446/446
(100 %)
0 diff
(100 %id)
BE311641 Kidney, renal cell adenocarcinoma .a 442 to 901 1 to 460       460/720
(63 %)
1 diff
(99.9 %id)
BM799370 Ascites, stomach .a 442 to 813 1 to 372       372/372
(100 %)
2 diff
(99.5 %id)
BX109014 liver and spleen .a 443 to 898 1 to 456   AAA   456/456
(100 %)
1 diff
(99.8 %id)
BE312663 brain, neuroblastoma .a 443 to 899 1 to 456       456/456
(100 %)
2 diff
(99.6 %id)
BM689086 eye, optic nerve .a 444 to 706 1 to 263       263/263
(100 %)
7 diff
(97.4 %id)
BE277236 melanotic melanoma, skin .a 445 to 900 1 to 455   AAA   455/455
(100 %)
1 diff
(99.8 %id)
AA373671 lung .a 447 to 771 1 to 328       328/335
(97 %)
8 diff
(97.7 %id)
AI557312 Prostate .a 447 to 900 8 to 463   AAA Submitted on the opposite strand 456/463
(98 %)
7 diff
(98.5 %id)
BE792608 lung, small cell carcinoma .a 448 to 899 1 to 453       453/787
(57 %)
2 diff
(99.8 %id)
BE898870 adenocarcinoma cell line, ovary .a 448 to 902 1 to 450   AAA   450/450
(100 %)
6 diff
(98.7 %id)
BE740089 adenocarcinoma cell line, ovary .a 449 to 902 1 to 453   AAA   453/453
(100 %)
1 diff
(99.8 %id)
BG985265 colon_normal .a 453 to 883 436 to 5       432/436
(99 %)
2 diff
(99.6 %id)
BM826918 Ascites, stomach .a 453 to 796 1 to 343       343/343
(100 %)
2 diff
(99.5 %id)
BG959038 colon .a 454 to 888 439 to 4       436/439
(99 %)
12 diff
(97.3 %id)
AV705340 adrenal gland .a 458 to 888 1 to 431   AAA   431/431
(100 %)
2 diff
(99.6 %id)
BQ319710 colon .a 458 to 879 437 to 30       355/437
(81 %)
6 diff
(98.7 %id)
N68310 cochlea, ear .a 458 to 900 454 to 17   AAA   438/441
(99 %)
19 diff
(95.7 %id)
AA602850 breast, breast tumor .a 458 to 903 447 to 2       446/447
(99 %)
6 diff
(98.7 %id)
DB565997 hypothalamus .a 459 to 900 1 to 443   AAA Submitted on the opposite strand 443/443
(100 %)
6 diff
(98.7 %id)
BE732327 choriocarcinoma, placenta .a 459 to 899 1 to 441       441/441
(100 %)
0 diff
(100 %id)
AA935407 Kidney, kidney tumor .a 462 to 898 450 to 14   AAA   437/437
(100 %)
10 diff
(97.8 %id)
AA668660   .a 463 to 893 427 to 1       427/449
(95 %)
14 diff
(96.9 %id)
DB553189 hypothalamus .a 464 to 898 1 to 436     Submitted on the opposite strand 436/436
(100 %)
19 diff
(95.7 %id)
T99287 liver and spleen .a 465 to 885 1 to 433   fully sequenced, AAA   433/433
(100 %)
27 diff
(93.8 %id)
DB557990 hypothalamus .a 466 to 898 1 to 433     Submitted on the opposite strand 433/433
(100 %)
2 diff
(99.6 %id)
AA620589 lung, lung carcinoma .a 467 to 901 435 to 1       435/435
(100 %)
10 diff
(97.8 %id)
BU960927 mixed (pool of 40 RNAs) .a 476 to 901 1 to 426       426/427
(99 %)
2 diff
(99.6 %id)
N77672 liver and spleen .a 479 to 619 8 to 147   fully sequenced,   140/147
(95 %)
6 diff
(96.0 %id)
N73323 liver and spleen .a 479 to 694 8 to 223       216/223
(96 %)
6 diff
(97.4 %id)
AA700570 liver and spleen .a 479 to 898 432 to 14   AAA   419/419
(100 %)
3 diff
(99.3 %id)
BG982358 colon_normal .a 482 to 850 376 to 13       364/376
(96 %)
1 diff
(99.8 %id)
DB562948 hypothalamus .a 482 to 899 1 to 418     Submitted on the opposite strand 418/419
(99 %)
2 diff
(99.6 %id)
N78084 liver and spleen .a 487 to 580 12 to 107   fully sequenced,   96/107
(89 %)
6 diff
(94.4 %id)
AV747096 Pituitary .a 488 to 895 1 to 402       402/403
(99 %)
18 diff
(95.6 %id)
AJ712188 heart .a 489 to 901 418 to 6     Submitted on the opposite strand 413/430
(96 %)
5 diff
(98.9 %id)
DB559286 hypothalamus .a 493 to 898 1 to 406     Submitted on the opposite strand 406/407
(99 %)
2 diff
(99.6 %id)
H93556 liver and spleen .a 493 to 900 404 to 1       404/405
(99 %)
10 diff
(97.6 %id)
AV759082 bone marrow .a 494 to 896 1 to 393       393/393
(100 %)
6 diff
(98.5 %id)
AA352579   .a 495 to 895 1 to 403       403/442
(91 %)
11 diff
(97.6 %id)
EL946737 eyeball .a 497 to 898 1 to 402   AAA   402/402
(100 %)
4 diff
(99.1 %id)
AI347822 2 pooled tumors (clear cell type), Kidney .a 498 to 901 407 to 4       404/436
(92 %)
0 diff
(100 %id)
AI367160 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 498 to 861 1 to 364     Submitted on the opposite strand 364/364
(100 %)
0 diff
(100 %id)
AW009868 colon .a 498 to 855 1 to 358     Submitted on the opposite strand 358/358
(100 %)
0 diff
(100 %id)
BF058946 fibrotheoma, ovary .a 498 to 849 1 to 352     Submitted on the opposite strand 352/352
(100 %)
0 diff
(100 %id)
BF058097 fibrotheoma, ovary .a 498 to 849 1 to 352     Submitted on the opposite strand 352/352
(100 %)
0 diff
(100 %id)
TI_57215698   .a 498 to 811 345 to 32     Submitted on the opposite strand 314/678
(46 %)
0 diff
(100 %id)
AW576006 lymph .a 499 to 728 1 to 230     Submitted on the opposite strand 230/230
(100 %)
0 diff
(100 %id)
AA302306 aorta .a 502 to 777 1 to 277       277/277
(100 %)
1 diff
(99.7 %id)
BP387411 pancreatic islet .a 502 to 899 1 to 398     Submitted on the opposite strand 398/401
(99 %)
1 diff
(99.8 %id)
AA081234   .a 505 to 900 408 to 12   AAA   397/473
(83 %)
5 diff
(99.0 %id)
AJ709123 heart .a 506 to 899 393 to 1     Submitted on the opposite strand 393/393
(100 %)
1 diff
(99.8 %id)
AJ709543 heart .a 506 to 900 424 to 30   AAA Submitted on the opposite strand 395/395
(100 %)
1 diff
(99.8 %id)
AJ709676 heart .a 506 to 898 403 to 11     Submitted on the opposite strand 393/403
(97 %)
0 diff
(100 %id)
AJ710277 heart .a 506 to 899 400 to 7     Submitted on the opposite strand 394/400
(98 %)
0 diff
(100 %id)
AJ710377 heart .a 506 to 899 415 to 23     Submitted on the opposite strand 393/415
(94 %)
1 diff
(99.8 %id)
AJ711792 heart .a 506 to 899 400 to 7     Submitted on the opposite strand 394/400
(98 %)
0 diff
(100 %id)
AJ711829 heart .a 506 to 901 404 to 9     Submitted on the opposite strand 396/404
(98 %)
0 diff
(100 %id)
CN367793 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 506 to 891 386 to 1     Submitted on the opposite strand 386/386
(100 %)
1 diff
(99.8 %id)
EL952152 eyeball .a 506 to 900 1 to 395   AAA   395/395
(100 %)
3 diff
(99.3 %id)
N69477 liver and spleen .a 506 to 898 397 to 2       396/397
(99 %)
3 diff
(99.3 %id)
BI755179 brain .a 506 to 810 305 to 1     Submitted on the opposite strand 305/305
(100 %)
0 diff
(100 %id)
AI676168 Prostate .a 507 to 871 1 to 365     Submitted on the opposite strand 365/365
(100 %)
4 diff
(99.0 %id)
BM987315 mixed .a 507 to 898 413 to 22       392/413
(94 %)
0 diff
(100 %id)
C02937 heart .a 508 to 673 1 to 166       166/166
(100 %)
1 diff
(99.4 %id)
AA196031.
matches multiple genes
muscle, skeletal muscle .a 508 to 888 383 to 3     also hits gene TNNC2 381/383
(99 %)
0 diff
(100 %id)
BQ639825 eye, retina .a 510 to 899 1 to 390       390/466
(83 %)
1 diff
(99.8 %id)
N45356 liver and spleen .a 516 to 684 1 to 168   fully sequenced,   168/168
(100 %)
2 diff
(98.9 %id)
AI090063 uterus .a 516 to 861 1 to 346     Submitted on the opposite strand 346/346
(100 %)
0 diff
(100 %id)
AI688757 colon .a 516 to 884 1 to 369     Submitted on the opposite strand 369/369
(100 %)
0 diff
(100 %id)
AW054890 colon .a 516 to 855 1 to 340     Submitted on the opposite strand 340/340
(100 %)
0 diff
(100 %id)
AA372297 colon .a 518 to 702 1 to 185       185/185
(100 %)
0 diff
(100 %id)
AV738714 cord Blood .a 518 to 898 42 to 421   AAA   380/421
(90 %)
3 diff
(99.3 %id)
AI015584 Kidney .a 522 to 856 6 to 339     Submitted on the opposite strand 334/339
(98 %)
1 diff
(99.8 %id)
AA412469   .a 525 to 900 377 to 1       377/377
(100 %)
14 diff
(96.3 %id)
BP317119 pericardium .a 526 to 901 1 to 376       376/376
(100 %)
0 diff
(100 %id)
FN048498 breast carcinoma .a 527 to 618 92 to 1     Submitted on the opposite strand 92/94
(97 %)
1 diff
(99.0 %id)
AI420236 Prostate .a 528 to 595 1 to 68     Submitted on the opposite strand 68/68
(100 %)
0 diff
(100 %id)
AI914045 carcinoid, lung .a 528 to 613 1 to 86     Submitted on the opposite strand 86/86
(100 %)
0 diff
(100 %id)
AI970976 Prostate .a 529 to 595 1 to 68     Submitted on the opposite strand 68/68
(100 %)
2 diff
(97.1 %id)
F31291 pectoral muscle (after mastectomy) .a 542 to 611 1 to 70       70/70
(100 %)
0 diff
(100 %id)
N58495 liver and spleen .a 550 to 898 354 to 1   fully sequenced,   354/354
(100 %)
5 diff
(98.6 %id)
N79092 multiple sclerosis lesions .a 556 to 704 1 to 149       149/156
(95 %)
4 diff
(97.5 %id)
BE696355 colon .a 570 to 693 11 to 131       121/131
(92 %)
7 diff
(94.7 %id)
AA130716 colon, tumor .a 572 to 901 329 to 1   fully sequenced,   329/329
(100 %)
2 diff
(99.4 %id)
BU728871 eye, optic nerve .a 572 to 898 345 to 19   fully sequenced, AAA   327/327
(100 %)
0 diff
(100 %id)
TI_151745280   .a 572 to 900 406 to 78   fully sequenced, AAA   329/329
(100 %)
0 diff
(100 %id)
BQ317001 colon .a 576 to 703 19 to 145       127/153
(83 %)
14 diff
(90.9 %id)
F32100 pectoral muscle (after mastectomy) .a 579 to 650 1 to 72       72/72
(100 %)
0 diff
(100 %id)
BM966872 Islets of Langerhans, Pancreas .a 599 to 900 1 to 302   fully sequenced, AAA   302/302
(100 %)
7 diff
(97.7 %id)
N58306 liver and spleen .a 602 to 898 299 to 4   fully sequenced,   296/299
(98 %)
2 diff
(99.4 %id)
AA877044 metastatic prostate bone lesion .a 602 to 901 302 to 3       300/312
(96 %)
2 diff
(99.4 %id)
AA876683 metastatic prostate bone lesion .a 602 to 901 305 to 7       299/309
(96 %)
2 diff
(99.4 %id)
AI167270 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 602 to 900 316 to 18   AAA   299/317
(94 %)
4 diff
(98.8 %id)
AI202635 Prostate .a 602 to 901 305 to 5       301/306
(98 %)
1 diff
(99.7 %id)
AI160480 heart .a 603 to 900 314 to 16   AAA   299/299
(100 %)
0 diff
(100 %id)
AI720738 colon .a 603 to 900 297 to 1       297/297
(100 %)
0 diff
(100 %id)
AA635745 normal prostate, Prostate .a 605 to 732 1 to 126     Submitted on the opposite strand 126/126
(100 %)
7 diff
(94.5 %id)
AI581590 colon .a 605 to 898 297 to 1       297/324
(91 %)
7 diff
(97.9 %id)
BP386907 pancreatic islet .a 606 to 901 1 to 296     Submitted on the opposite strand 296/299
(98 %)
3 diff
(99.0 %id)
CR740305 colon .a 609 to 898 11 to 300   AAA   290/300
(96 %)
7 diff
(97.7 %id)
AW882765 ovary .a 612 to 886 274 to 1       274/288
(95 %)
6 diff
(98.0 %id)
EH333553   .a 612 to 686 1 to 75       75/75
(100 %)
1 diff
(98.7 %id)
AJ573361 pectoral muscle (after mastectomy) .a 624 to 901 1 to 278       278/286
(97 %)
1 diff
(99.7 %id)
F33067 pectoral muscle (after mastectomy) .a 624 to 895 1 to 272       272/272
(100 %)
0 diff
(100 %id)
F16835 pectoral muscle (after mastectomy) .a 627 to 901 1 to 275       275/275
(100 %)
3 diff
(99.0 %id)
AI435887 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 629 to 900 307 to 36   AAA   272/272
(100 %)
7 diff
(97.5 %id)
AV707009 adrenal gland .a 633 to 900 1 to 268   AAA   268/268
(100 %)
0 diff
(100 %id)
AA883393 pooled .a 635 to 894 261 to 2       260/261
(99 %)
5 diff
(98.1 %id)
AV705495 adrenal gland .a 640 to 898 1 to 259   AAA   259/259
(100 %)
3 diff
(98.9 %id)
BG108653 retina, Retinal Pigment Epithelium sheets .a 640 to 899 8 to 274       267/282
(94 %)
15 diff
(94.7 %id)
BE171850 head_neck .a 641 to 898 260 to 5     Submitted on the opposite strand 256/266
(96 %)
4 diff
(98.5 %id)
F18667 pectoral muscle (after mastectomy) .a 641 to 899 1 to 258       258/261
(98 %)
17 diff
(93.5 %id)
BM851154 stomach .a 641 to 900 1 to 261   AAA   261/261
(100 %)
1 diff
(99.7 %id)
AA335742 epididymis .a 647 to 900 1 to 254       254/254
(100 %)
1 diff
(99.7 %id)
AA335872 epididymis .a 647 to 900 1 to 254       254/254
(100 %)
0 diff
(100 %id)
AA336021 epididymis .a 647 to 901 1 to 255       255/257
(99 %)
1 diff
(99.7 %id)
AW882749 ovary .a 648 to 893 1 to 250       246/252
(97 %)
15 diff
(94.1 %id)
AA484706 alveolar rhabdomyosarcoma .a 648 to 887 9 to 248   AAA   240/248
(96 %)
6 diff
(97.6 %id)
AA643928 breast .a 648 to 898 1 to 257     Submitted on the opposite strand 257/257
(100 %)
19 diff
(92.7 %id)
F16337 pectoral muscle (after mastectomy) .a 653 to 899 1 to 247       247/247
(100 %)
1 diff
(99.6 %id)
N39552 liver and spleen .a 654 to 900 247 to 1   fully sequenced,   247/247
(100 %)
2 diff
(99.2 %id)
F23416 pectoral muscle (after mastectomy) .a 654 to 899 1 to 246       246/246
(100 %)
3 diff
(98.8 %id)
CD108860 brain, Pituitary .a 656 to 900 1 to 245   AAA   245/245
(100 %)
0 diff
(100 %id)
AA558646 Prostate, prostatic intraepithelial neoplasia - highgrade .a 659 to 900 1 to 240   AAA   240/240
(100 %)
8 diff
(96.7 %id)
DW434233 Liver .a 663 to 898 17 to 252       236/259
(91 %)
7 diff
(97.3 %id)
BG984259 colon_normal .a 664 to 873 210 to 1       210/210
(100 %)
10 diff
(95.3 %id)
EC505245 Prostate .a 666 to 761 1 to 96       96/96
(100 %)
3 diff
(96.9 %id)
T99242 liver and spleen .a 672 to 883 217 to 1   fully sequenced,   217/217
(100 %)
3 diff
(98.7 %id)
AA132483 colon, tumor .a 672 to 901 231 to 2   fully sequenced,   230/231
(99 %)
0 diff
(100 %id)
CK905072 insulinoma, Pancreas .a 672 to 896 225 to 1   fully sequenced,   225/225
(100 %)
0 diff
(100 %id)
BM893631 Islets of Langerhans, Pancreas .a 672 to 900 246 to 18   fully sequenced, AAA   229/229
(100 %)
0 diff
(100 %id)
BF378555 uterus .a 677 to 897 5 to 226       222/235
(94 %)
15 diff
(93.7 %id)
AA169473   .a 679 to 887 1 to 208     Submitted on the opposite strand 208/219
(94 %)
2 diff
(99.1 %id)
CB110032 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB110056 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB110079 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB110088 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB110091 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB110092 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB113458 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB113490 Liver .a 679 to 900 82 to 304   AAA   223/304
(73 %)
6 diff
(98.1 %id)
CB113839 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB113918 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB113928 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB114068 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB114143 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB114174 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB114193 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB114197 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB114199 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB114204 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB115302 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB115347 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB121822 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB118214 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB118219 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB118224 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB118229 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB118241 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB118260 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB118269 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB122767 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB122771 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB122784 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB119104 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB119801 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB119810 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB118296 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB119139 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB119163 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB119191 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB119202 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB119207 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB119214 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB118483 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB119235 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB119244 Liver .a 679 to 900 73 to 295   AAA   223/295
(75 %)
6 diff
(98.0 %id)
CB119271 Liver .a 679 to 900 73 to 295   AAA   223/295
(75 %)
6 diff
(98.0 %id)
CB121356 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB121363 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB121396 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB122921 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB122930 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
CB122931 Liver .a 679 to 900 81 to 303   AAA   223/303
(73 %)
6 diff
(98.1 %id)
AF281041 colon cancer, tongue .a 688 to 900 229 to 16   AAA   214/215
(99 %)
1 diff
(99.6 %id)
F21060 pectoral muscle (after mastectomy) .a 699 to 897 4 to 202       199/202
(98 %)
6 diff
(97.1 %id)
AA328732   .a 703 to 898 1 to 196       196/196
(100 %)
0 diff
(100 %id)
EC471217 Prostate .a 703 to 789 14 to 95       82/95
(86 %)
5 diff
(94.8 %id)
AW593966 pooled germ cell tumors .a 716 to 900 185 to 1       185/185
(100 %)
1 diff
(99.5 %id)
AW006440 normal prostate, Prostate .a 723 to 901 183 to 5       179/183
(97 %)
0 diff
(100 %id)
EC513908 Prostate .a 732 to 819 1 to 88       88/88
(100 %)
0 diff
(100 %id)
AA934938 metastatic prostate bone lesion .a 736 to 900 1 to 164   AAA   164/164
(100 %)
2 diff
(98.8 %id)
BM128509 Islets of Langerhans, Pancreas .a 738 to 901 1 to 164   fully sequenced,   164/164
(100 %)
1 diff
(99.4 %id)
N53827 liver and spleen .a 751 to 896 146 to 1       146/146
(100 %)
1 diff
(99.4 %id)
EC471110 Prostate .a 785 to 880 1 to 96       96/101
(95 %)
4 diff
(96.1 %id)
AA147273.
matches multiple genes
  .a 793 to 900 109 to 1     also hits gene TXNDC9andLYG1 109/118
(92 %)
1 diff
(99.2 %id)
BM128304 Islets of Langerhans, Pancreas .a 819 to 900 82 to 1   fully sequenced,   82/82
(100 %)
0 diff
(100 %id)
AA379810 skin .b 1 to 379 1 to 381 D39G Y41I N42Q V43C L44T ... tiling clone,   381/381
(100 %)
5 diff
(98.7 %id)
R73661 placenta .c 1 to 321 1 to 322   tiling clone, Submitted on the opposite strand 322/322
(100 %)
3 diff
(99.1 %id)
R73744 placenta .c 219 to 639 428 to 1     Submitted on the opposite strand 428/455
(94 %)
14 diff
(97.0 %id)
AA378671 synovial membrane .c 229 to 604 1 to 383       383/383
(100 %)
8 diff
(98.0 %id)
AW964164   .c 230 to 930 1 to 702   tiling clone,   702/741
(94 %)
13 diff
(98.3 %id)
AA330435   .c 463 to 736 1 to 275       275/276
(99 %)
3 diff
(99.0 %id)
H22325 breast .c 812 to 1187 1 to 379 exact tiling clone,   379/387
(97 %)
9 diff
(97.7 %id)
AA132932 colon, tumor .c 850 to 1219 373 to 1 K5X D9X P16Q K17R G18E ...     373/380
(98 %)
11 diff
(97.2 %id)
F27911 pectoral muscle (after mastectomy) .c 850 to 1177 1 to 328 A3V     328/328
(100 %)
6 diff
(98.2 %id)
T28555 Spleen .c 853 to 1227 382 to 1 L2S A3C A4W K5L K6A ...     382/387
(98 %)
10 diff
(97.5 %id)
AJ571897 pectoral muscle (after mastectomy) .c 854 to 1219 1 to 364 exact     364/364
(100 %)
8 diff
(97.9 %id)
BF360538 ovary .c 854 to 1139 298 to 15       284/305
(93 %)
0 diff
(100 %id)
DW434197 Liver .c 854 to 1094 19 to 259       241/259
(93 %)
6 diff
(97.7 %id)
AW196081 adenocarcinoma, Pancreas .c 854 to 1225 1 to 374 K5N G21C G39R   Submitted on the opposite strand 374/374
(100 %)
10 diff
(97.4 %id)
F20266 pectoral muscle (after mastectomy) .c 854 to 1178 1 to 326 A3X I37X     326/326
(100 %)
1 diff
(99.7 %id)
AA515070 colon .c 855 to 1227 1 to 369 Q60S R61D C62A R64L C65W ... AAA Submitted on the opposite strand 369/369
(100 %)
5 diff
(98.7 %id)
AA515783 colon .c 855 to 1188 1 to 333 G18E A19L S20Q G21A T22P ...   Submitted on the opposite strand 333/333
(100 %)
1 diff
(99.7 %id)
AA535352 colon .c 855 to 1202 1 to 348 exact   Submitted on the opposite strand 348/348
(100 %)
0 diff
(100 %id)
AA524170 colon .c 855 to 1192 1 to 337 G18E A19L S20Q G21A T22P ...   Submitted on the opposite strand 337/337
(100 %)
1 diff
(99.8 %id)
AI082704 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 855 to 1188 1 to 332 G18E A19L S20Q G21A T22P ...   Submitted on the opposite strand 332/332
(100 %)
2 diff
(99.4 %id)
AI299760 carcinoid, lung .c 855 to 1191 1 to 337 exact   Submitted on the opposite strand 337/337
(100 %)
1 diff
(99.8 %id)
AI282279 Kidney, renal cell tumor .c 855 to 1227 1 to 373 exact AAA Submitted on the opposite strand 373/373
(100 %)
2 diff
(99.5 %id)
AI498152 anaplastic oligodendroglioma, brain .c 855 to 1212 1 to 358 exact   Submitted on the opposite strand 358/358
(100 %)
0 diff
(100 %id)
AW024783 Kidney .c 855 to 1191 1 to 337 exact   Submitted on the opposite strand 337/337
(100 %)
0 diff
(100 %id)
AA494357 colon .c 856 to 1191 1 to 338 A4E V13E L14H A15G A19S ...   Submitted on the opposite strand 338/338
(100 %)
5 diff
(98.6 %id)
AA527583 colon .c 856 to 1190 1 to 335 G18A   Submitted on the opposite strand 335/335
(100 %)
4 diff
(98.9 %id)
AA524356 colon .c 856 to 1213 1 to 359 G18E A19L S20H G21A T22P ...   Submitted on the opposite strand 357/359
(99 %)
15 diff
(95.9 %id)
AA613501 colon, colon tumor RER+ .c 856 to 1114 1 to 258     Submitted on the opposite strand 258/258
(100 %)
3 diff
(98.9 %id)
AA715311 normal prostate, Prostate .c 856 to 1227 1 to 371 G18D Q60S R61D C62A R64A ... AAA Submitted on the opposite strand 371/371
(100 %)
6 diff
(98.4 %id)
AI302968 2 pooled tumors (clear cell type), Kidney .c 856 to 1221 1 to 367 exact   Submitted on the opposite strand 367/367
(100 %)
7 diff
(98.1 %id)
AI749145 colon .c 856 to 1228 376 to 3 exact     374/376
(99 %)
0 diff
(100 %id)
AI817940 normal prostate, Prostate .c 856 to 1210 1 to 356 exact   Submitted on the opposite strand 356/356
(100 %)
2 diff
(99.5 %id)
BF061737 pooled germ cell tumors .c 858 to 1176 1 to 319 exact   Submitted on the opposite strand 319/319
(100 %)
1 diff
(99.7 %id)
F22436 pectoral muscle (after mastectomy) .c 860 to 1198 1 to 335 G18E A19L S20Q G21A T22P ...     335/335
(100 %)
4 diff
(98.9 %id)
AJ571949 pectoral muscle (after mastectomy) .c 860 to 1225 1 to 366 exact     366/366
(100 %)
0 diff
(100 %id)
F24261 pectoral muscle (after mastectomy) .c 861 to 1217 1 to 357 exact     357/357
(100 %)
2 diff
(99.5 %id)
F37135 pectoral muscle (after mastectomy) .c 861 to 1117 1 to 257       257/257
(100 %)
2 diff
(99.3 %id)
AJ573964 pectoral muscle (after mastectomy) .c 862 to 1222 1 to 360 S31P I32S S33P N34T K35R ...     360/360
(100 %)
2 diff
(99.5 %id)
AJ711088 heart .c 863 to 1226 379 to 16 exact   Submitted on the opposite strand 364/379
(96 %)
0 diff
(100 %id)
AA327567 colon .c 866 to 1213 1 to 353 C40X E44X A59G A77G H78T     353/353
(100 %)
7 diff
(98.1 %id)
AA932458 2 pooled tumors (clear cell type), Kidney .c 866 to 1191 1 to 325 G18E A19L S20Q G21A T22P ...   Submitted on the opposite strand 325/325
(100 %)
1 diff
(99.7 %id)
AW009388 colon .c 867 to 1201 1 to 335 exact   Submitted on the opposite strand 335/335
(100 %)
3 diff
(99.2 %id)
AA902930 leiomyosarcoma, soft tissue .c 868 to 1225 1 to 358 G18E A19L S20Q G21A T22P ...   Submitted on the opposite strand 358/358
(100 %)
4 diff
(98.9 %id)
AI266617 2 pooled tumors (clear cell type), Kidney .c 868 to 1223 355 to 1 D9T P10H Y11T N12M V13S ...     355/366
(96 %)
15 diff
(96.0 %id)
F19494 pectoral muscle (after mastectomy) .c 869 to 1191 322 to 1 K70N     322/322
(100 %)
2 diff
(99.4 %id)
BG995272 head_neck .c 870 to 1206 346 to 11 exact     336/346
(97 %)
0 diff
(100 %id)
F34072 pectoral muscle (after mastectomy) .c 870 to 1201 1 to 332 exact     332/332
(100 %)
0 diff
(100 %id)
AI796683 Kidney .c 871 to 1210 348 to 9 exact     340/348
(97 %)
0 diff
(100 %id)
BE073610 breast .c 872 to 1201 342 to 13 S20T K70H   Submitted on the opposite strand 330/342
(96 %)
9 diff
(97.4 %id)
AA128611 uterus .c 873 to 1228 363 to 6 G57S Y69X K70X L71X V72G ...   Submitted on the opposite strand 358/363
(98 %)
0 diff
(100 %id)
AA128612 uterus .c 873 to 1225 1 to 357 K6N Y11X A15X G18E A19L ...   Submitted on the opposite strand 357/357
(100 %)
21 diff
(94.2 %id)
W00883 liver and spleen .c 874 to 917 1 to 44   fully sequenced,   44/44
(100 %)
0 diff
(100 %id)
AJ574614 pectoral muscle (after mastectomy) .c 875 to 1224 1 to 349 D9V     349/349
(100 %)
8 diff
(97.8 %id)
AI799824 Prostate .c 876 to 1227 352 to 1 exact     352/356
(98 %)
2 diff
(99.5 %id)
TI_151703344   .c 876 to 1227 441 to 90 S33A AAA   352/989
(35 %)
8 diff
(99.2 %id)
AA009570 liver and spleen .c 877 to 1207 1 to 338 G18E A19L S20Q G21A T22P ...     338/338
(100 %)
13 diff
(96.2 %id)
F35483 pectoral muscle (after mastectomy) .c 879 to 1159 1 to 281 K6M D9Y K17R F52V     281/281
(100 %)
6 diff
(97.9 %id)
BE858426 brain, glioblastoma (pooled) .c 882 to 1226 348 to 4 E58K Q60H R61L R64L G66E ...     345/352
(98 %)
0 diff
(100 %id)
BQ101124 Islets of Langerhans, Pancreas .c 884 to 1227 1 to 344 exact fully sequenced, AAA   344/344
(100 %)
0 diff
(100 %id)
N74608 liver and spleen .c 887 to 1225 354 to 15 A15G A19S S20F G21R T22H ... fully sequenced, AAA   340/340
(100 %)
3 diff
(99.2 %id)
AI720111 colon .c 888 to 1225 338 to 1 exact     338/338
(100 %)
0 diff
(100 %id)
F19426 pectoral muscle (after mastectomy) .c 890 to 1163 1 to 274 exact     274/274
(100 %)
0 diff
(100 %id)
BP329747 rectum .c 890 to 1228 1 to 339 exact tiling clone,   339/466
(72 %)
1 diff
(99.8 %id)
F25947 pectoral muscle (after mastectomy) .c 892 to 1220 1 to 330 V50R W51L F52V W53L L54A ...     330/330
(100 %)
1 diff
(99.7 %id)
BG958606 colon .c 894 to 1207 315 to 1 exact     315/317
(99 %)
3 diff
(99.1 %id)
DB577385 hypothalamus .c 894 to 1225 1 to 332 V29F   Submitted on the opposite strand 332/332
(100 %)
2 diff
(99.4 %id)
F28517 pectoral muscle (after mastectomy) .c 895 to 1223 1 to 329 exact     329/329
(100 %)
0 diff
(100 %id)
BE169064 head_neck .c 898 to 1206 312 to 3 P26N   Submitted on the opposite strand 310/312
(99 %)
2 diff
(99.4 %id)
F16340 pectoral muscle (after mastectomy) .c 898 to 1228 1 to 331 A3G     331/331
(100 %)
3 diff
(99.1 %id)
D19679   .c 902 to 1181 1 to 283 C42X E43X E58X R61X C65X ...   Submitted on the opposite strand 283/284
(99 %)
4 diff
(98.6 %id)
F18744 pectoral muscle (after mastectomy) .c 904 to 1226 1 to 323 exact     323/323
(100 %)
0 diff
(100 %id)
GD157649   .c 905 to 1228 1 to 324 L2T     324/331
(97 %)
6 diff
(98.2 %id)
GD159003   .c 905 to 1225 1 to 319 L2R A3V A4Q K5R K6R ... AAA   319/319
(100 %)
5 diff
(98.5 %id)
BG981094 colon_normal .c 909 to 1226 13 to 329   AAA   317/329
(96 %)
13 diff
(96.1 %id)
BG983817 colon_normal .c 909 to 1170 1 to 267   AAA   267/267
(100 %)
9 diff
(96.7 %id)
BU536939 mixed (pool of 40 RNAs) .c 909 to 1227 1 to 319   AAA   319/319
(100 %)
3 diff
(99.1 %id)
F26768 pectoral muscle (after mastectomy) .c 912 to 1150 1 to 239       239/239
(100 %)
1 diff
(99.6 %id)
F33866 pectoral muscle (after mastectomy) .c 912 to 1214 1 to 303   AAA   303/303
(100 %)
2 diff
(99.4 %id)
BG983822 colon_normal .c 915 to 1227 1 to 313   AAA   313/313
(100 %)
4 diff
(98.8 %id)
AA807933 normal prostate, Prostate .c 915 to 1202 1 to 288     Submitted on the opposite strand 288/288
(100 %)
0 diff
(100 %id)
AI340558 brain, oligodendroglioma .c 919 to 1231 12 to 324   AAA Submitted on the opposite strand 313/324
(96 %)
2 diff
(99.4 %id)
AI348840 brain, oligodendroglioma .c 919 to 1225 12 to 318   AAA Submitted on the opposite strand 307/318
(96 %)
0 diff
(100 %id)
AI335515 brain, oligodendroglioma .c 919 to 1227 23 to 331   AAA Submitted on the opposite strand 309/331
(93 %)
2 diff
(99.4 %id)
AI345359 brain, oligodendroglioma .c 919 to 1225 41 to 347   AAA Submitted on the opposite strand 307/347
(88 %)
1 diff
(99.8 %id)
AI590519 bone marrow, CD34+, T negative, patient with chronicmyelogenous leukemia .c 919 to 1227 12 to 320   AAA Submitted on the opposite strand 309/320
(96 %)
1 diff
(99.7 %id)
AW405851 lymph .c 919 to 1227 334 to 26   AAA Submitted on the opposite strand 309/309
(100 %)
0 diff
(100 %id)
F27205 pectoral muscle (after mastectomy) .c 921 to 1224 1 to 304       304/304
(100 %)
1 diff
(99.7 %id)
BF057958 brain, oligodendroglioma .c 923 to 1139 1 to 217       217/217
(100 %)
5 diff
(97.7 %id)
AV682297 hepatocellular carcinoma .c 925 to 1227 1 to 303   AAA   303/303
(100 %)
0 diff
(100 %id)
BM966817 Islets of Langerhans, Pancreas .c 926 to 1227 1 to 302   fully sequenced, AAA   302/302
(100 %)
0 diff
(100 %id)
BQ100825 Islets of Langerhans, Pancreas .c 999 to 1228 230 to 1   fully sequenced,   230/230
(100 %)
0 diff
(100 %id)
BM893592 Islets of Langerhans, Pancreas .c 999 to 1227 246 to 18   fully sequenced, AAA   229/229
(100 %)
0 diff
(100 %id)
AA393683.
matches multiple genes
  .d 1 to 568 1 to 564 S87P H88T tiling clone, also hits gene OR7E38PandASNS 564/564
(100 %)
10 diff
(98.3 %id)
BG982344 colon_normal .d 182 to 604 438 to 16   tiling clone,   423/438
(96 %)
1 diff
(99.8 %id)
BM053123 Islets of Langerhans, Pancreas .d 313 to 770 1 to 458   tiling clone, fully sequenced,   458/458
(100 %)
0 diff
(100 %id)
BM052811 Islets of Langerhans, Pancreas .d 740 to 1281 542 to 1   tiling clone, fully sequenced,   542/542
(100 %)
4 diff
(99.3 %id)
AI699318 pooled .e-u 1 to 364 370 to 6 exact tiling clone,   365/370
(98 %)
0 diff
(100 %id)
BX483705   Gene COX5B, variant not shown         This clone was ignored    
DB492040 hypothalamus Gene COX5B, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI