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Gene CXCR7TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
269 supporting clones for gene CXCR7 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB196255 trachea .a 1 to 511 2 to 512   tiling clone, capped   511/511
(100 %)
1 diff
(99.9 %id)
AU129799   .a 2 to 704 2 to 710   tiling clone, capped   709/720
(98 %)
9 diff
(98.8 %id)
DB367086   .a 1401 to 1964 564 to 1   tiling clone,   564/564
(100 %)
13 diff
(97.7 %id)
DB455412 testis .b 1 to 458 1 to 458   tiling clone,   458/458
(100 %)
1 diff
(99.8 %id)
BC036661 testis .b 4 to 2298 1 to 2295 I228V tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 2295/2295
(100 %)
3 diff
(99.9 %id)
DB453830 testis .b 4 to 486 1 to 483       483/483
(100 %)
1 diff
(99.8 %id)
BI460261 testis .b 4 to 609 6 to 613       608/613
(99 %)
15 diff
(97.6 %id)
DA380695 thalamus .c 1 to 574 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
BP426139 small intestine .c 96 to 386 1 to 291     Submitted on the opposite strand 291/293
(99 %)
1 diff
(99.7 %id)
NM_020311.2   .c 96 to 2193 1 to 2098 exact RefSeq, AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 2098/2098
(100 %)
0 diff
(100 %id)
BU150252 dorsal root ganglia .c 116 to 886 1 to 779       779/873
(89 %)
12 diff
(98.7 %id)
DA380932 thalamus .c 152 to 680 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
DA746834   .c 154 to 720 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BM925428 brain .c 159 to 1077 9 to 926       918/1034
(88 %)
13 diff
(98.8 %id)
DA821798 pericardium .c 163 to 727 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
CB992297 placenta, pre-eclamptic placenta .c 179 to 968 20 to 812       793/813
(97 %)
14 diff
(98.3 %id)
CB988949 Human Placenta, placenta .c 179 to 678 20 to 523       504/985
(51 %)
11 diff
(98.9 %id)
CB985237 Pooled-Glandular .c 182 to 889 1 to 712       712/722
(98 %)
7 diff
(99.1 %id)
DA130078 alzheimer cortex .c 183 to 817 2 to 636   capped   635/635
(100 %)
0 diff
(100 %id)
DA423241   .c 183 to 714 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
DA428408 colon .c 183 to 680 2 to 499   capped   498/498
(100 %)
1 diff
(99.8 %id)
DA428479 colon .c 183 to 746 2 to 567   capped   566/567
(99 %)
3 diff
(99.5 %id)
DA988724 synovial membrane tissue from rheumatioidarthritis .c 183 to 739 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB245374 uterus, tumor tissue .c 183 to 741 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
AK291659 placenta .c 184 to 1663 1 to 1480 exact     1480/1480
(100 %)
0 diff
(100 %id)
DA138996 alzheimer cortex .c 184 to 682 2 to 500   capped   499/499
(100 %)
0 diff
(100 %id)
DB445813 testis .c 184 to 645 1 to 462       460/462
(99 %)
6 diff
(98.8 %id)
CB991219 placenta, pre-eclamptic placenta .c 184 to 898 28 to 742       715/825
(86 %)
23 diff
(97.3 %id)
CD110165 placenta, pre-eclamptic placenta .c 184 to 808 28 to 657       630/934
(67 %)
22 diff
(97.7 %id)
AU310085 neuroblastoma .c 184 to 763 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DB180635 kidney, tumor tissue .c 184 to 674 2 to 493   capped   492/492
(100 %)
1 diff
(99.8 %id)
DA022007   .c 185 to 747 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA027700   .c 185 to 742 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA044658 bladder .c 185 to 664 2 to 481   capped   480/480
(100 %)
1 diff
(99.8 %id)
DA046493 bladder .c 185 to 743 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA134757 alzheimer cortex .c 185 to 710 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DA172145 amygdala .c 185 to 737 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA296217 hippocampus .c 185 to 742 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA376492 thalamus .c 185 to 674 2 to 491   capped   490/490
(100 %)
0 diff
(100 %id)
DA380856 thalamus .c 185 to 779 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
DA380991 thalamus .c 185 to 737 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA383573 thalamus .c 185 to 757 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA423819   .c 185 to 754 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA424387   .c 185 to 752 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA602370   .c 185 to 762 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA662240   .c 185 to 740 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA745328   .c 185 to 757 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA753824   .c 185 to 674 2 to 491   capped   490/490
(100 %)
0 diff
(100 %id)
AU133632 ovary, tumor tissue .c 185 to 908 2 to 725   capped   724/724
(100 %)
2 diff
(99.8 %id)
DA823999 pericardium .c 185 to 751 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
AU137882 placenta .c 185 to 915 2 to 740   capped   739/756
(97 %)
13 diff
(98.3 %id)
AU138958 placenta .c 185 to 933 2 to 755   capped   754/770
(97 %)
12 diff
(98.5 %id)
DA854214 placenta .c 185 to 780 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA891569 rectum .c 185 to 746 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA988830 synovial membrane tissue from rheumatioidarthritis .c 185 to 740 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA997062   .c 185 to 740 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB016648 esophageal, tumor tissue .c 185 to 761 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB016795 esophageal, tumor tissue .c 185 to 710 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DB019121 esophageal, tumor tissue .c 185 to 664 2 to 481   capped   480/480
(100 %)
0 diff
(100 %id)
DB206477 trachea .c 185 to 746 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB478061 hippocampus .c 186 to 398 1 to 213       213/213
(100 %)
2 diff
(99.1 %id)
DB505399 hypothalamus .c 186 to 654 1 to 469       469/469
(100 %)
0 diff
(100 %id)
DB018688 esophageal, tumor tissue .c 186 to 740 2 to 556   capped   555/556
(99 %)
4 diff
(99.3 %id)
DA480719   .c 187 to 744 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA749885   .c 187 to 752 2 to 567   capped   566/567
(99 %)
1 diff
(99.9 %id)
AU136934 placenta .c 187 to 811 2 to 632   capped   631/781
(80 %)
8 diff
(99.0 %id)
AU139232 placenta .c 187 to 905 2 to 723   capped   722/729
(99 %)
6 diff
(99.2 %id)
CN332462 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 189 to 961 1 to 773       773/773
(100 %)
6 diff
(99.3 %id)
DA732316   .c 189 to 942 2 to 761   capped   760/765
(99 %)
17 diff
(97.8 %id)
BG898175 cartilage .c 190 to 812 46 to 668       623/668
(93 %)
6 diff
(99.2 %id)
AU137128 placenta .c 190 to 1007 2 to 831   capped   830/833
(99 %)
19 diff
(97.8 %id)
DA371086 thalamus .c 191 to 742 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BM921366 pooled brain, lung, testis .c 191 to 793 1 to 604       604/1141
(52 %)
22 diff
(98.1 %id)
CN332455 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 193 to 768 1 to 576       576/579
(99 %)
5 diff
(99.2 %id)
CN332460 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 193 to 755 1 to 564       564/564
(100 %)
6 diff
(99.0 %id)
AA205847   .c 194 to 945 1 to 737       737/816
(90 %)
30 diff
(96.4 %id)
BI767134 pooled lung and spleen .c 196 to 1034 1 to 851       851/852
(99 %)
21 diff
(97.6 %id)
TI_57183583   .c 196 to 1034 35 to 885       851/886
(96 %)
26 diff
(97.1 %id)
BG897793 cartilage .c 198 to 485 86 to 373       288/305
(94 %)
6 diff
(98.1 %id)
BG901125 cartilage .c 198 to 547 78 to 427       350/369
(94 %)
8 diff
(97.9 %id)
CN332456 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 198 to 472 8 to 282       275/282
(97 %)
7 diff
(97.6 %id)
CR616388 placenta .c 198 to 1901 1 to 1704 exact tiling clone,   1704/1704
(100 %)
0 diff
(100 %id)
AL540325 placenta .c 198 to 1039 1 to 841   fully sequenced,   841/841
(100 %)
1 diff
(99.9 %id)
AL543359 placenta, Placenta Cot 25-normalized .c 198 to 1259 1 to 1061       1061/1067
(99 %)
19 diff
(98.3 %id)
CD517328 White Matter .c 198 to 1024 23 to 857       835/954
(87 %)
21 diff
(97.8 %id)
BX358027 Placenta Cot 25-normalized .c 199 to 1022 1 to 826       826/826
(100 %)
12 diff
(98.6 %id)
CD172317 White Matter .c 199 to 1020 1 to 830       830/862
(96 %)
11 diff
(98.8 %id)
BX339756 Placenta Cot 25-normalized .c 201 to 1249 1 to 1044       1044/1067
(97 %)
8 diff
(99.3 %id)
CX788966 human embryonic stem cells .c 203 to 1016 1 to 814       814/814
(100 %)
0 diff
(100 %id)
DN997353 breast cancer, Mammary gland (cancer tissue) .c 203 to 984 1 to 782       782/782
(100 %)
5 diff
(99.4 %id)
BM458484 lymph, lymphoma, cell line .c 205 to 1225 1 to 1022       1022/1072
(95 %)
33 diff
(97.0 %id)
DR005763 Prostate .c 205 to 955 1 to 751       751/751
(100 %)
3 diff
(99.7 %id)
CX763275 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 207 to 941 1 to 735     Submitted on the opposite strand 735/735
(100 %)
0 diff
(100 %id)
BQ889219 dorsal root ganglia .c 209 to 1077 1 to 884       884/939
(94 %)
29 diff
(97.0 %id)
BX483000   .c 215 to 973 1 to 760       760/765
(99 %)
3 diff
(99.7 %id)
AA340652 Kidney .c 216 to 480 1 to 265       265/265
(100 %)
1 diff
(99.7 %id)
DA826909 pericardium .c 223 to 742 2 to 521   capped   520/520
(100 %)
1 diff
(99.9 %id)
BF926353 nervous_tumor .c 227 to 570 1 to 344       344/344
(100 %)
0 diff
(100 %id)
DB457784 testis .c 257 to 760 1 to 504       504/504
(100 %)
1 diff
(99.9 %id)
AL568342 placenta .c 1009 to 1878 893 to 25   fully sequenced,   869/893
(97 %)
35 diff
(96.1 %id)
BX392652 Placenta Cot 25-normalized .c 1499 to 2197 702 to 1       702/855
(82 %)
42 diff
(95.1 %id)
DB371167 ovary, tumor tissue .c 1539 to 2106 569 to 1       569/576
(98 %)
21 diff
(96.4 %id)
DB379465 placenta .c 1629 to 2193 559 to 1   tiling clone,   559/576
(97 %)
20 diff
(96.6 %id)
DB379026 placenta .c 1659 to 2201 541 to 1       541/593
(91 %)
8 diff
(98.7 %id)
DB375820 placenta .c 1660 to 2193 533 to 1       533/537
(99 %)
14 diff
(97.4 %id)
DB376181 placenta .c 1679 to 2193 511 to 1       511/583
(87 %)
22 diff
(96.3 %id)
DB377387 placenta .c 1683 to 2193 511 to 1       511/512
(99 %)
8 diff
(98.5 %id)
DB363756   .c 1691 to 2193 503 to 2       502/505
(99 %)
0 diff
(100 %id)
AA197246   .c 1849 to 2014 166 to 1       166/166
(100 %)
0 diff
(100 %id)
CN332461 embryonic stem cells, cell lines H1, H7, andH9 .d-u 1 to 669 12 to 678   tiling clone,   667/678
(98 %)
6 diff
(99.2 %id)
BF154747 breast .d-u 132 to 568 1 to 439       439/439
(100 %)
9 diff
(98.0 %id)
TI_1948092829   .d-u 463 to 1167 119 to 825   fully sequenced,   707/825
(85 %)
9 diff
(99.0 %id)
CV024577 mixed .d-u 468 to 1055 1 to 588       588/588
(100 %)
0 diff
(100 %id)
DQ822477 testes .d-u 468 to 1556 1 to 1089 exact tiling clone,   1089/1089
(100 %)
0 diff
(100 %id)
CO934176 mixed .d-u 468 to 1077 14 to 615       602/743
(81 %)
6 diff
(99.2 %id)
M64749   .d-u 468 to 1552 1 to 1085       1085/1086
(99 %)
13 diff
(98.9 %id)
BG957992 colon .d-u 473 to 717 249 to 5       245/249
(98 %)
0 diff
(100 %id)
AU136867 placenta .d-u 511 to 1188 2 to 681   capped   680/684
(99 %)
3 diff
(99.6 %id)
CB853008 Human Lung Epithelial cells, lung .d-u 590 to 1337 1 to 747     Submitted on the opposite strand 747/747
(100 %)
6 diff
(99.2 %id)
TI_159721360   .d-u 596 to 1605 59 to 1060     Submitted on the opposite strand 1002/1149
(87 %)
19 diff
(98.4 %id)
AW966793   .d-u 640 to 1293 1 to 664       664/666
(99 %)
23 diff
(96.6 %id)
AW966794   .d-u 640 to 978 1 to 340       340/344
(98 %)
22 diff
(93.7 %id)
R15256 whole brain .d-u 649 to 993 1 to 351       351/466
(75 %)
9 diff
(98.1 %id)
AA296456 umbilical vein .d-u 650 to 960 1 to 311       311/316
(98 %)
1 diff
(99.7 %id)
CN332458 embryonic stem cells, DMSO-treated H9 cellline .d-u 651 to 1237 1 to 587       587/587
(100 %)
2 diff
(99.7 %id)
H12955 whole brain .d-u 655 to 799 1 to 145     Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 145/145
(100 %)
0 diff
(100 %id)
AA331167 Embryo, 8 weeks .d-u 675 to 935 1 to 261       261/261
(100 %)
3 diff
(98.9 %id)
AW965239   .d-u 676 to 1081 1 to 407       407/409
(99 %)
20 diff
(95.2 %id)
CN332463 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d-u 752 to 1521 1 to 770       770/770
(100 %)
3 diff
(99.7 %id)
BF842751 head_neck .d-u 788 to 1256 542 to 73     Submitted on the opposite strand 470/569
(82 %)
0 diff
(100 %id)
BC008459 Prostate .d-u 857 to 2350 1 to 1494   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 1494/1494
(100 %)
0 diff
(100 %id)
R20475 whole brain .d-u 860 to 1140 1 to 288     Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 288/288
(100 %)
13 diff
(95.5 %id)
TI_1948092398   .d-u 903 to 1555 778 to 125       654/1349
(48 %)
0 diff
(100 %id)
R27256 placenta .d-u 910 to 1230 5 to 327       323/327
(98 %)
6 diff
(98.2 %id)
TI_1948092678   .d-u 910 to 1555 772 to 127       646/1371
(47 %)
0 diff
(100 %id)
BY796660 eye .d-u 933 to 1524 1 to 592       592/592
(100 %)
0 diff
(100 %id)
TI_1948092526   .d-u 969 to 1555 716 to 124       593/1384
(42 %)
0 diff
(100 %id)
BM722609 eye, fetal eye .d-u 973 to 1617 1 to 645     Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 645/645
(100 %)
0 diff
(100 %id)
CD245020 White Matter .d-u 1020 to 1867 1 to 854       854/893
(95 %)
6 diff
(99.4 %id)
AA558023 bone marrow, stem cells .d-u 1027 to 1310 8 to 289       282/291
(96 %)
7 diff
(97.6 %id)
AI908219 breast .d-u 1051 to 1359 325 to 16       310/331
(93 %)
0 diff
(100 %id)
N58609 liver and spleen .d-u 1075 to 1378 1 to 308       308/312
(98 %)
8 diff
(97.5 %id)
CO934324 mixed .d-u 1086 to 1638 552 to 4       549/740
(74 %)
0 diff
(100 %id)
BM768952 stomach .d-u 1133 to 1599 1 to 466       466/466
(100 %)
1 diff
(99.8 %id)
BM769488 stomach .d-u 1133 to 1793 1 to 662       662/662
(100 %)
3 diff
(99.6 %id)
BM769858 stomach .d-u 1133 to 1750 1 to 618       618/618
(100 %)
0 diff
(100 %id)
BM769927 stomach .d-u 1133 to 1618 1 to 486       486/486
(100 %)
0 diff
(100 %id)
TI_1948092830   .d-u 1137 to 1562 545 to 121   fully sequenced,   425/545
(77 %)
8 diff
(98.6 %id)
R30721   .d-u 1163 to 1507 1 to 343       343/347
(98 %)
4 diff
(98.9 %id)
CN332454 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d-u 1213 to 1828 1 to 616       616/616
(100 %)
1 diff
(99.9 %id)
CX784662 human embryonic stem cells .d-u 1221 to 2103 1 to 882       882/882
(100 %)
3 diff
(99.7 %id)
CN332457 embryonic stem cells, DMSO-treated H9 cellline .d-u 1225 to 1958 1 to 736       736/736
(100 %)
4 diff
(99.5 %id)
BF515290   .d-u 1232 to 1743 533 to 22       512/533
(96 %)
0 diff
(100 %id)
BU853298 testis .d-u 1239 to 1718 1 to 482       482/803
(60 %)
10 diff
(98.8 %id)
CN332459 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d-u 1255 to 2004 1 to 750       750/750
(100 %)
0 diff
(100 %id)
BE934222 head_neck .d-u 1264 to 1623 368 to 12       357/368
(97 %)
0 diff
(100 %id)
C05136 heart .d-u 1290 to 1699 1 to 410       410/410
(100 %)
0 diff
(100 %id)
BX327330 Placenta Cot 25-normalized .d-u 1292 to 2065 1 to 776       776/930
(83 %)
15 diff
(98.4 %id)
T29462 placenta .d-u 1362 to 1513 1 to 152       152/152
(100 %)
0 diff
(100 %id)
BQ183931 Knee, Osteoarthritic Cartilage .d-u 1417 to 2099 698 to 17   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 682/682
(100 %)
1 diff
(99.9 %id)
BM712288 eye, lens .d-u 1425 to 1860 1 to 436   fully sequenced, Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 436/436
(100 %)
0 diff
(100 %id)
CD512617 Pooled-Skin .d-u 1439 to 2171 1 to 736       736/736
(100 %)
5 diff
(99.4 %id)
TI_159705998   .d-u 1452 to 2356 899 to 6       894/1001
(89 %)
0 diff
(100 %id)
AA057666.
matches multiple genes
cornea .d-u 1511 to 1645 1 to 135     also hits gene THOC3 135/135
(100 %)
0 diff
(100 %id)
CD677369 eye, Trabecular meshwork .d-u 1520 to 2135 1 to 616       616/616
(100 %)
0 diff
(100 %id)
CD677436 eye, Trabecular meshwork .d-u 1520 to 2119 1 to 600       600/600
(100 %)
0 diff
(100 %id)
CD677469 eye, Trabecular meshwork .d-u 1520 to 2114 1 to 595       595/595
(100 %)
1 diff
(99.9 %id)
BG899061 cartilage .d-u 1525 to 1922 81 to 477       397/412
(96 %)
2 diff
(99.6 %id)
BF508628   .d-u 1541 to 1885 362 to 18       345/371
(92 %)
0 diff
(100 %id)
BQ447471 Knee, Osteoarthritic Cartilage .d-u 1562 to 2099 554 to 17   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 538/538
(100 %)
1 diff
(99.9 %id)
TI_149274020   .d-u 1593 to 2359 840 to 77   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 764/990
(77 %)
18 diff
(98.2 %id)
TI_227713758   .d-u 1593 to 2351 824 to 68   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 757/962
(78 %)
4 diff
(99.6 %id)
BQ446586 Knee, Osteoarthritic Cartilage .d-u 1626 to 2351 744 to 19   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 726/726
(100 %)
0 diff
(100 %id)
BQ014479 Chondrosarcoma, Left Pubic Bone .d-u 1628 to 2296 687 to 19   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 669/669
(100 %)
3 diff
(99.6 %id)
BQ003386 Chondrosarcoma, Left Pelvis .d-u 1628 to 2359 747 to 19   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 729/729
(100 %)
6 diff
(99.2 %id)
BQ181065 Knee, Osteoarthritic Cartilage .d-u 1628 to 2359 750 to 19   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 732/732
(100 %)
1 diff
(99.9 %id)
CD742596 Alveolar Macrophage, lung .d-u 1639 to 2351 732 to 19   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 714/714
(100 %)
1 diff
(99.9 %id)
AA313086 placenta .d-u 1646 to 1823 1 to 177       177/177
(100 %)
4 diff
(97.8 %id)
AA369066 placenta .d-u 1646 to 1933 1 to 287       287/288
(99 %)
3 diff
(99.0 %id)
AI829881 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .d-u 1647 to 2098 452 to 1       452/452
(100 %)
1 diff
(99.8 %id)
TI_154108850   .d-u 1652 to 2351 799 to 99   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 701/710
(98 %)
6 diff
(99.2 %id)
BQ575983 Chondrosarcoma Grade II, Left Pelvis .d-u 1663 to 2359 716 to 19   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 698/698
(100 %)
2 diff
(99.8 %id)
BG924594 cartilage .d-u 1668 to 2160 80 to 572       493/509
(96 %)
6 diff
(98.9 %id)
AA309177 Kidney .d-u 1671 to 1823 1 to 153       153/153
(100 %)
3 diff
(98.1 %id)
AA341595 Kidney .d-u 1671 to 1913 1 to 243       243/243
(100 %)
4 diff
(98.4 %id)
CN480419 Knee, Osteoarthritic Cartilage .d-u 1693 to 2351 678 to 19   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 660/660
(100 %)
2 diff
(99.7 %id)
TI_149299889   .d-u 1706 to 2351 733 to 87   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 647/648
(99 %)
1 diff
(99.9 %id)
AW950583   .d-u 1723 to 2350 628 to 1     Submitted on the opposite strand 628/628
(100 %)
3 diff
(99.6 %id)
BU675958 lung, Primary Lung Epithelial Cells .d-u 1724 to 2359 655 to 19   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 637/637
(100 %)
2 diff
(99.7 %id)
BM976073 lung, Primary Lung Cystic Fibrosis EpithelialCells .d-u 1726 to 2351 645 to 19   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 627/627
(100 %)
1 diff
(99.9 %id)
AI817041 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .d-u 1765 to 2351 589 to 1       589/589
(100 %)
2 diff
(99.7 %id)
CD677680 eye, Trabecular meshwork .d-u 1799 to 2351 1 to 553   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 553/553
(100 %)
0 diff
(100 %id)
BX111686 whole brain .d-u 1800 to 2351 566 to 15   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 552/552
(100 %)
0 diff
(100 %id)
DB375716 placenta .d-u 1826 to 2351 531 to 8       524/531
(98 %)
0 diff
(100 %id)
BU737754 eye, lens .d-u 1830 to 2351 538 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 520/520
(100 %)
4 diff
(99.3 %id)
BQ010467 Chondrosarcoma, Left Pubic Bone .d-u 1831 to 2351 540 to 19   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 522/522
(100 %)
18 diff
(96.6 %id)
TI_159713611   .d-u 1835 to 2351 61 to 577   AAA Submitted on the opposite strand 517/577
(89 %)
6 diff
(99.0 %id)
CB851879 Human Lung Epithelial cells, lung .d-u 1835 to 2351 13 to 529   AAA Submitted on the opposite strand 517/529
(97 %)
6 diff
(98.9 %id)
BQ573919 Chondrosarcoma Grade II, Left Pelvis .d-u 1851 to 2366 1 to 514     Submitted on the opposite strand 514/517
(99 %)
6 diff
(98.9 %id)
AI492871 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d-u 1854 to 2360 507 to 1   tiling clone,   507/507
(100 %)
0 diff
(100 %id)
AW629419 pooled .d-u 1854 to 2353 498 to 1       498/498
(100 %)
1 diff
(99.8 %id)
AI147203 heart .d-u 1855 to 2360 506 to 1       506/506
(100 %)
0 diff
(100 %id)
AW130966 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .d-u 1855 to 2173 319 to 1       319/319
(100 %)
0 diff
(100 %id)
AI224103 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d-u 1870 to 2358 485 to 1       485/488
(99 %)
9 diff
(98.2 %id)
DB576670 hypothalamus .d-u 1872 to 2359 1 to 488     Submitted on the opposite strand 488/488
(100 %)
0 diff
(100 %id)
BQ187796 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d-u 1874 to 2351 41 to 516   fully sequenced, AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 476/516
(92 %)
6 diff
(98.9 %id)
DB512488 testis .d-u 1876 to 2296 1 to 421     Submitted on the opposite strand 421/421
(100 %)
0 diff
(100 %id)
AW771400 colon, juvenile granulosa tumor .d-u 1877 to 2172 296 to 1       296/296
(100 %)
0 diff
(100 %id)
AI640338 Kidney .d-u 1879 to 2284 413 to 8       406/413
(98 %)
0 diff
(100 %id)
AJ712263 heart .d-u 1881 to 2351 496 to 26   AAA Submitted on the opposite strand 471/471
(100 %)
7 diff
(98.6 %id)
BM679253 eye, fetal eye .d-u 1891 to 2351 480 to 19   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 462/462
(100 %)
2 diff
(99.6 %id)
DB523276 testis .d-u 1892 to 2364 1 to 473     Submitted on the opposite strand 473/476
(99 %)
3 diff
(99.4 %id)
AW628350 2 pooled high-grade transitional celltumors, genitourinary tract .d-u 1900 to 2172 273 to 1       273/273
(100 %)
1 diff
(99.7 %id)
AA329221   .d-u 1908 to 2235 1 to 335       335/335
(100 %)
16 diff
(95.3 %id)
DB540842 hippocampus .d-u 1909 to 2351 1 to 443   AAA Submitted on the opposite strand 443/443
(100 %)
0 diff
(100 %id)
BG928236 cartilage .d-u 1917 to 2364 86 to 533       448/485
(92 %)
6 diff
(98.8 %id)
AW473319 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d-u 1918 to 2172 255 to 1       255/255
(100 %)
0 diff
(100 %id)
AW473327 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d-u 1918 to 2172 255 to 1       255/255
(100 %)
0 diff
(100 %id)
AI375869 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d-u 1920 to 2359 452 to 13   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 440/440
(100 %)
0 diff
(100 %id)
DB519286 testis .d-u 1921 to 2351 1 to 431     Submitted on the opposite strand 431/431
(100 %)
0 diff
(100 %id)
AW079349 colon, moderately differentiated adenocarcinoma .d-u 1921 to 2172 252 to 1       252/252
(100 %)
0 diff
(100 %id)
DB520826 testis .d-u 1924 to 2351 1 to 428   AAA Submitted on the opposite strand 428/428
(100 %)
0 diff
(100 %id)
AW771079 colon, juvenile granulosa tumor .d-u 1943 to 2172 230 to 1       230/230
(100 %)
0 diff
(100 %id)
DB510837 testis .d-u 1947 to 2350 1 to 406     Submitted on the opposite strand 406/407
(99 %)
9 diff
(97.8 %id)
AA057819 cornea .d-u 1954 to 2172 228 to 1       228/228
(100 %)
11 diff
(95.2 %id)
AI948652 anaplastic oligodendroglioma, brain .d-u 1959 to 2356 399 to 2       398/399
(99 %)
0 diff
(100 %id)
DB556097 hypothalamus .d-u 1963 to 2359 30 to 430     Submitted on the opposite strand 401/430
(93 %)
6 diff
(98.7 %id)
AW316612 brain, three pooled meningiomas .d-u 1966 to 2172 207 to 1       207/207
(100 %)
0 diff
(100 %id)
AI954302 malignant melanoma, metastatic to lymphnode, skin .d-u 1967 to 2319 395 to 43   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 353/353
(100 %)
27 diff
(92.4 %id)
AI954295 malignant melanoma, metastatic to lymphnode, skin .d-u 1967 to 2172 206 to 1       206/206
(100 %)
0 diff
(100 %id)
AW128872 brain, tumor, 5 pooled (see description) .d-u 1967 to 2172 206 to 1       206/206
(100 %)
0 diff
(100 %id)
AI285638 esophagus, squamous cell carcinoma .d-u 1968 to 2172 205 to 1       205/205
(100 %)
0 diff
(100 %id)
BP417966 small intestine .d-u 1984 to 2355 1 to 372     Submitted on the opposite strand 372/372
(100 %)
0 diff
(100 %id)
BE439928 Trabecular meshwork .d-u 1986 to 2364 393 to 17       377/393
(95 %)
13 diff
(96.7 %id)
AI364791 ovary, tumor, 5 pooled (see description) .d-u 1988 to 2172 185 to 1       185/185
(100 %)
0 diff
(100 %id)
H05591 whole brain .d-u 1999 to 2351 361 to 12   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 350/351
(99 %)
5 diff
(98.6 %id)
TI_159718506   .d-u 2018 to 2351 73 to 406   AAA Submitted on the opposite strand 334/406
(82 %)
6 diff
(98.6 %id)
CB852667 Human Lung Epithelial cells, lung .d-u 2018 to 2351 18 to 351   AAA Submitted on the opposite strand 334/351
(95 %)
6 diff
(98.3 %id)
TI_149273412   .d-u 2047 to 2350 59 to 361     Submitted on the opposite strand 303/1082
(28 %)
5 diff
(99.6 %id)
TI_159714456   .d-u 2047 to 2351 398 to 94   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 305/1017
(29 %)
3 diff
(99.8 %id)
CB853876 lung, Primary Lung Epithelial Cells .d-u 2047 to 2350 12 to 314     Submitted on the opposite strand 303/321
(94 %)
5 diff
(98.5 %id)
CB306949 Human Lung Epithelial cells, lung .d-u 2047 to 2351 323 to 19   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 305/329
(92 %)
3 diff
(99.1 %id)
CB853484 Human Lung Epithelial cells, lung .d-u 2047 to 2362 12 to 327     Submitted on the opposite strand 316/332
(95 %)
7 diff
(97.9 %id)
AI277740 placenta .d-u 2051 to 2355 305 to 1       305/305
(100 %)
0 diff
(100 %id)
AA912155 pooled .d-u 2064 to 2356 295 to 3       293/295
(99 %)
0 diff
(100 %id)
AA927383 pooled .d-u 2065 to 2354 290 to 1       290/290
(100 %)
0 diff
(100 %id)
AA916077 breast .d-u 2066 to 2172 107 to 1       107/107
(100 %)
1 diff
(99.1 %id)
AA309135 Embryo, 8 weeks .d-u 2078 to 2296 219 to 1       219/219
(100 %)
0 diff
(100 %id)
R45296 whole brain .d-u 2086 to 2351 289 to 24   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 266/272
(97 %)
0 diff
(100 %id)
AA296457 umbilical vein .d-u 2088 to 2351 264 to 1       264/264
(100 %)
0 diff
(100 %id)
N53172 liver and spleen .d-u 2088 to 2353 266 to 1       266/266
(100 %)
0 diff
(100 %id)
BQ185452 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d-u 2093 to 2351 275 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 257/257
(100 %)
1 diff
(99.7 %id)
AA331166 Embryo, 8 weeks .d-u 2094 to 2296 203 to 1       203/203
(100 %)
0 diff
(100 %id)
AA313046 umbilical vein .d-u 2097 to 2351 255 to 1       255/255
(100 %)
0 diff
(100 %id)
CB853963 lung, Primary Lung Epithelial Cells .d-u 2136 to 2351 15 to 232   AAA Submitted on the opposite strand 218/232
(93 %)
6 diff
(97.5 %id)
BP390774 pancreatic islet .d-u 2137 to 2353 1 to 217     Submitted on the opposite strand 217/217
(100 %)
0 diff
(100 %id)
AA905072 pooled .d-u 2144 to 2351 208 to 1       208/208
(100 %)
0 diff
(100 %id)
AW088001 esophagus, squamous cell carcinoma .d-u 2187 to 2359 199 to 27   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 173/173
(100 %)
5 diff
(97.2 %id)
BF475500 sciatic nerve .d-u 2189 to 2353 165 to 1       165/165
(100 %)
0 diff
(100 %id)
AI633054 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d-u 2227 to 2359 133 to 1       133/133
(100 %)
0 diff
(100 %id)
BC038720 testis .e-u 1 to 1454 1 to 1454 exact tiling clone, available from MGC, AAA   1454/1454
(100 %)
1 diff
(100.0 %id)
BI460564 testis .e-u 1 to 770 6 to 771   available from MGC,   766/807
(94 %)
20 diff
(97.6 %id)
BQ960517 epidermoid carcinoma, cell line, lung .e-u 473 to 1379 22 to 935       914/983
(92 %)
18 diff
(98.2 %id)
BU561473 testis .e-u 858 to 1453 1 to 593       593/890
(66 %)
12 diff
(98.7 %id)
BX110394   .e-u 1020 to 1454 1 to 435   AAA   435/435
(100 %)
0 diff
(100 %id)
AI187209   .e-u 1070 to 1456 388 to 2       387/388
(99 %)
0 diff
(100 %id)
AI908131 breast .e-u 1148 to 1335 233 to 45       189/233
(81 %)
0 diff
(100 %id)
BE709889 head_neck .e-u 1290 to 1862 573 to 1       573/573
(100 %)
0 diff
(100 %id)
DB146369 thymus .e-u 1433 to 1945 2 to 514   tiling clone, capped   513/513
(100 %)
0 diff
(100 %id)
DA381499 thalamus .f-u 1 to 624 2 to 626   tiling clone, capped   625/625
(100 %)
2 diff
(99.7 %id)
AL601285   .f-u 35 to 362 1 to 328       328/328
(100 %)
2 diff
(99.4 %id)
AK023507 placenta .f-u 36 to 1829 1 to 1794 exact tiling clone, available from FLJ,   1794/1794
(100 %)
1 diff
(100.0 %id)
AU135817 placenta .f-u 37 to 793 2 to 768   capped   767/814
(94 %)
19 diff
(97.7 %id)
DA849475 placenta .f-u 37 to 594 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DB103715 thymus .f-u 37 to 593 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
BM804836 ovary (pool of 3) .f-u 45 to 1021 1 to 985       985/985
(100 %)
23 diff
(97.7 %id)
BQ708227 Spleen .f-u 164 to 1024 1 to 866       866/885
(97 %)
22 diff
(97.6 %id)
BY796217 eye .f-u 180 to 772 1 to 593       593/593
(100 %)
0 diff
(100 %id)
CN360517 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .f-u 343 to 885 20 to 561       542/561
(96 %)
6 diff
(99.0 %id)
DW432523 Liver .f-u 460 to 707 18 to 265       248/265
(93 %)
6 diff
(97.8 %id)
AW876728 pnet .f-u 834 to 1022 1 to 191       191/217
(88 %)
16 diff
(92.7 %id)
BE552368 pooled germ cell tumors .f-u 1262 to 1830 569 to 1       569/569
(100 %)
0 diff
(100 %id)
AU156305 placenta .f-u 1379 to 1829 452 to 2       451/452
(99 %)
0 diff
(100 %id)
AI620820 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .f-u 1404 to 1836 433 to 1       433/433
(100 %)
0 diff
(100 %id)
AA634753 lung .f-u 1451 to 1829 1 to 379       379/381
(99 %)
6 diff
(98.5 %id)
AW007857 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .f-u 1539 to 1838 300 to 1   tiling clone,   300/300
(100 %)
1 diff
(99.7 %id)
AF030297   Gene CXCR7, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
AV727911 hypothalamus Gene CXCR7, variant not shown         Suspected internal deletion, this clone was ignored    
U67784   Gene CXCR7, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e-u, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC