To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene CLEC4AandZNF705AandFAM66CTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
130 supporting clones for gene CLEC4AandZNF705AandFAM66C back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
EU196761   .a 1 to 349 1 to 349   tiling clone,   349/349
(100 %)
4 diff
(98.9 %id)
DB089360 testis .a 280 to 778 59 to 557   tiling clone, capped   499/556
(89 %)
6 diff
(99.0 %id)
BG203970   .a 392 to 1052 54 to 720       667/838
(79 %)
53 diff
(93.7 %id)
AK131339 testis .a 475 to 3912 186 to 3623 exact tiling clone, available from FLJ,   3438/3623
(94 %)
6 diff
(99.9 %id)
NM_001004328.2   .a 475 to 3912 1 to 3438 exact RefSeq,   3438/3438
(100 %)
0 diff
(100 %id)
DB060591 testis .a 475 to 817 187 to 530   capped   344/529
(65 %)
7 diff
(98.7 %id)
DB339206 testis .a 3384 to 3912 530 to 1       530/530
(100 %)
1 diff
(99.9 %id)
DN998858 bone marrow .b 1 to 694 1 to 694       694/694
(100 %)
16 diff
(97.7 %id)
AF067800   .b 6 to 1286 22 to 1302 H36L S130C tiling clone,   1281/1305
(98 %)
10 diff
(99.3 %id)
NM_016184.3   .b 6 to 1289 1 to 1284 exact RefSeq,   1284/1284
(100 %)
3 diff
(99.8 %id)
AJ133532   .b 12 to 1283 1 to 1271 exact tiling clone,   1271/1271
(100 %)
6 diff
(99.6 %id)
AA380065 skin .b 13 to 266 1 to 254       254/254
(100 %)
1 diff
(99.7 %id)
AF328684   .b 14 to 1282 1 to 1270 H36L V229S C230L E231* tiling clone, AAA   1270/1270
(100 %)
3 diff
(99.8 %id)
BC117439 Lung, PCR rescued clones .b 111 to 1182 1 to 1072 H36L     1072/1072
(100 %)
2 diff
(99.9 %id)
BC117441 Lung, PCR rescued clones .b 111 to 1190 1 to 1080 H36L     1080/1080
(100 %)
2 diff
(99.9 %id)
TI_1320131325   .b 111 to 1186 48 to 1111 H36L     1064/1205
(88 %)
26 diff
(97.9 %id)
TI_1320131963   .b 111 to 1096 236 to 1206 H36L N218M D219M V220L N221I ...   Submitted on the opposite strand 971/1206
(80 %)
23 diff
(98.1 %id)
TI_1320131329   .b 144 to 1190 1099 to 65 T2H S3L E4C I5*     1035/1207
(85 %)
18 diff
(98.6 %id)
AF109146   .b 159 to 1280 1 to 1123 H36L AAA   1123/1123
(100 %)
3 diff
(99.8 %id)
CD691425 normal nasopharynx .b 212 to 507 33 to 329       297/329
(90 %)
12 diff
(96.4 %id)
CD685809 normal nasopharynx .b 226 to 775 23 to 572       550/572
(96 %)
16 diff
(97.3 %id)
CD691817 normal nasopharynx .b 226 to 838 41 to 654       614/654
(93 %)
8 diff
(98.8 %id)
CD701580 normal nasopharynx .b 226 to 595 23 to 394       370/394
(93 %)
15 diff
(96.2 %id)
BC074822 Lung, PCR rescued clones .b 231 to 1002 1 to 772 exact available from MGC,   772/772
(100 %)
0 diff
(100 %id)
BC074874 Lung, PCR rescued clones .b 231 to 1002 1 to 772 exact available from MGC,   772/772
(100 %)
0 diff
(100 %id)
CD683961 normal nasopharynx .b 249 to 729 17 to 498       482/498
(96 %)
8 diff
(98.4 %id)
FN128728 breast carcinoma .b 501 to 587 1 to 84       84/85
(98 %)
4 diff
(95.3 %id)
TI_1320133937   .b 504 to 1190 24 to 710   AAA   687/1125
(61 %)
7 diff
(99.4 %id)
AI949910 2 pooled tumors (clear cell type), Kidney .b 548 to 1284 743 to 7       737/753
(97 %)
15 diff
(98.1 %id)
TI_154122052   .b 618 to 1280 751 to 89   AAA   663/985
(67 %)
11 diff
(98.9 %id)
AW242656 Kidney .b 634 to 1284 666 to 13   AAA   654/654
(100 %)
21 diff
(96.8 %id)
BX106333   .b 656 to 1066 1 to 411       411/411
(100 %)
0 diff
(100 %id)
AA446401   .b 656 to 1103 1 to 448       448/448
(100 %)
0 diff
(100 %id)
FN101375 breast carcinoma .b 657 to 712 1 to 56       56/57
(98 %)
1 diff
(98.3 %id)
BQ002993 Chondrosarcoma, Left Pelvis .b 689 to 1279 608 to 19   AAA   590/590
(100 %)
1 diff
(99.9 %id)
AI400631 pooled .b 745 to 1286 544 to 4       541/544
(99 %)
1 diff
(99.9 %id)
AA418441 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 770 to 1283 1 to 513       513/513
(100 %)
2 diff
(99.7 %id)
AI338670 lung .b 783 to 1284 502 to 1       502/502
(100 %)
1 diff
(99.9 %id)
AA677149 liver and spleen .b 841 to 1277 437 to 1       437/437
(100 %)
0 diff
(100 %id)
TI_1320133935   .b 870 to 1190 9 to 327       319/1117
(28 %)
3 diff
(99.8 %id)
AI333747 lung .b 896 to 1284 392 to 4       389/392
(99 %)
0 diff
(100 %id)
C01555   .b 954 to 1280 1 to 327   AAA   327/327
(100 %)
0 diff
(100 %id)
BP390023 pancreatic islet .b 978 to 1284 1 to 307     Submitted on the opposite strand 307/309
(99 %)
1 diff
(99.7 %id)
NM_194450.2   .c 1 to 1185 1 to 1185 exact RefSeq,   1185/1185
(100 %)
3 diff
(99.8 %id)
AF200738   .c 248 to 862 1 to 615 H36L tiling clone,   615/615
(100 %)
1 diff
(99.9 %id)
NM_194447.2   .d 1 to 1167 1 to 1167 exact RefSeq,   1167/1167
(100 %)
3 diff
(99.8 %id)
NM_194448.2   .e 1 to 1068 1 to 1068 exact RefSeq,   1068/1068
(100 %)
3 diff
(99.8 %id)
TI_57181416   .f-u 1 to 849 59 to 903 W2G S3I tiling clone,   845/905
(93 %)
29 diff
(96.8 %id)
BI767314 pooled lung and spleen .f-u 9 to 849 1 to 837   tiling clone,   837/839
(99 %)
25 diff
(97.1 %id)
DA153252 amygdala .g 1 to 569 2 to 570   tiling clone, capped   569/569
(100 %)
2 diff
(99.7 %id)
AL538598.
matches multiple genes
brain, fetal brain .g 492 to 1027 524 to 1043   tiling clone, This clone was ignored, also hits gene farflerby 1044/1089
(95 %)
34 diff
(96.9 %id)
BG820517 anaplastic oligodendroglioma with 1p/19qloss, brain .g 492 to 624 516 to 650       648/650
(99 %)
28 diff
(95.7 %id)
AW265078 endometrioid ovarian metastasis, ovary .g 902 to 1320 34 to 452   tiling clone, Submitted on the opposite strand 419/452
(92 %)
6 diff
(98.7 %id)
CN284274 embryonic stem cells, cell lines H1, H7, andH9 .g 1081 to 1318 1 to 237       237/237
(100 %)
2 diff
(99.2 %id)
DR007883 pooled .h 1 to 336 7 to 342 T47A R55C H59R tiling clone,   342/342
(100 %)
9 diff
(97.4 %id)
AA626043   .i 1 to 496 500 to 5 E7Q tiling clone,   496/500
(99 %)
1 diff
(99.8 %id)
AI432523 adenocarcinoma, Pancreas .i 145 to 496 352 to 1       352/352
(100 %)
1 diff
(99.8 %id)
AA256221 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .j 1 to 450 1 to 450 exact     450/450
(100 %)
4 diff
(99.2 %id)
BX281791 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .j 2 to 504 1 to 503 exact tiling clone,   503/503
(100 %)
0 diff
(100 %id)
AA256163 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .j 493 to 875 383 to 1   tiling clone,   383/383
(100 %)
0 diff
(100 %id)
BC034777 Brain, Lung, Testis, adult, pooled whole .k 8 to 2092 1 to 2085 R35G tiling clone, available from MGC, AAA   2085/2085
(100 %)
6 diff
(99.8 %id)
NR_026788.1   .k 492 to 3213 545 to 3266 exact RefSeq, tiling clone,   3266/3266
(100 %)
0 diff
(100 %id)
CR599534 Neuroblastoma Cot 25-normalized .k 1851 to 3205 1 to 1355       1355/1355
(100 %)
0 diff
(100 %id)
BX394452 Neuroblastoma Cot 25-normalized .k 1851 to 2831 1 to 968       968/971
(99 %)
22 diff
(97.8 %id)
BQ100993 Islets of Langerhans, Pancreas .k 1939 to 2438 1 to 499       499/499
(100 %)
3 diff
(99.4 %id)
BQ101080 Islets of Langerhans, Pancreas .k 1939 to 2380 1 to 441       441/441
(100 %)
3 diff
(99.4 %id)
CK823103 Islets of Langerhans, Pancreas .k 1939 to 2531 1 to 591       591/591
(100 %)
5 diff
(99.2 %id)
BX106495 pooled .k 2414 to 3009 1 to 598       598/598
(100 %)
3 diff
(99.5 %id)
BM930065.
matches multiple genes
eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .k 2509 to 3149 51 to 691     also hits gene chawzawbu 641/691
(92 %)
6 diff
(99.2 %id)
BX451359 neuroblastoma .k 2632 to 3208 1 to 575       575/575
(100 %)
11 diff
(98.1 %id)
CK823102 Islets of Langerhans, Pancreas .k 2653 to 3206 566 to 13   AAA   554/554
(100 %)
0 diff
(100 %id)
BX351056.
matches multiple genes
Neuroblastoma Cot 25-normalized .k 2662 to 3202 544 to 5   tiling clone, also hits gene chawzawbu, spergoyby 540/903
(59 %)
0 diff
(100 %id)
BQ100791 Islets of Langerhans, Pancreas .k 2678 to 3206 541 to 13   AAA   529/529
(100 %)
0 diff
(100 %id)
AA906222 pooled .k 2747 to 3206 460 to 1       460/460
(100 %)
0 diff
(100 %id)
BQ100715 Islets of Langerhans, Pancreas .k 2758 to 3206 461 to 13   AAA   449/449
(100 %)
0 diff
(100 %id)
AA862519 Kidney .k 2791 to 3204 414 to 1       414/414
(100 %)
0 diff
(100 %id)
DB515020 testis .k 2793 to 3212 1 to 423     Submitted on the opposite strand 423/423
(100 %)
5 diff
(98.9 %id)
DA690257   .l -8 to 556 2 to 568 R13L A14G L15P R16A R17Q ... tiling clone, capped   567/569
(99 %)
5 diff
(99.2 %id)
BM548089 brain, hippocampus .l 18 to 852 16 to 850 exact tiling clone,   833/1105
(75 %)
34 diff
(97.0 %id)
DA318294 hippocampus .l 492 to 536 546 to 590 R13X A14G L15P R16A R17Q ... capped   589/589
(100 %)
3 diff
(99.5 %id)
DA337120 hippocampus .l 492 to 549 528 to 585 exact capped   584/584
(100 %)
2 diff
(99.7 %id)
DA396903 thalamus .l 492 to 538 545 to 591 exact capped   590/590
(100 %)
2 diff
(99.7 %id)
BG719359 testis .l 492 to 652 538 to 706 S68L A69R R70E R71K G72R ...     704/763
(92 %)
16 diff
(98.0 %id)
BI762534 pooled colon, kidney, stomach .l 492 to 778 525 to 811 G67A S68P A69R R70E R71E ... tiling clone,   811/813
(99 %)
18 diff
(97.8 %id)
BI560969 testis .l 492 to 782 537 to 838 exact     834/838
(99 %)
31 diff
(96.4 %id)
BC048994 testis .l 492 to 2582 532 to 2621 exact tiling clone, available from MGC, AAA   2621/2621
(100 %)
11 diff
(99.6 %id)
BI560965 testis .l 492 to 719 537 to 764 R85P V87R W88L P89A G90W ... available from MGC,   762/1011
(75 %)
20 diff
(98.1 %id)
TI_57150909   .l 492 to 778 552 to 838 G67A S68P A69R R70E R71E ...     809/840
(96 %)
18 diff
(97.9 %id)
TI_44349372   .l 492 to 719 621 to 848 R85P V87R W88L P89A G90W ...     757/1095
(69 %)
23 diff
(97.9 %id)
TI_44349376   .l 492 to 782 619 to 920 exact     829/920
(90 %)
32 diff
(96.6 %id)
DA724587   .l 492 to 503 545 to 556 exact capped   555/557
(99 %)
3 diff
(99.5 %id)
DA758343   .l 492 to 515 528 to 551 exact capped   550/550
(100 %)
2 diff
(99.7 %id)
DA778255 brain .l 492 to 507 547 to 562 R13X A14G L15P R16A R17Q ... capped   561/561
(100 %)
5 diff
(99.2 %id)
DA946611 Spleen .l 492 to 530 549 to 587 R13L A14G L15P R16A R17Q ... capped   586/586
(100 %)
6 diff
(99.0 %id)
DA497769 brain .m 1 to 345 5 to 350   capped   349/349
(100 %)
2 diff
(99.5 %id)
DA264107 caudate nucleus .m 1 to 414 4 to 417   tiling clone, capped   416/416
(100 %)
0 diff
(100 %id)
BI818514 pooled brain, lung, testis .m 8 to 751 1 to 746   tiling clone, available from MGC,   746/746
(100 %)
7 diff
(99.1 %id)
TI_57196408   .m 8 to 751 91 to 836       746/836
(89 %)
12 diff
(98.6 %id)
AK096301   .m 492 to 2114 545 to 2167 H41R tiling clone, available from FLJ,   2167/2167
(100 %)
14 diff
(99.4 %id)
DA349665 substantia nigra .n-u 1 to 593 2 to 594   tiling clone, capped   593/593
(100 %)
3 diff
(99.5 %id)
CK002125.
matches multiple genes
brain/CNS, Bulk tissue from Human Spinal cord .n-u 624 to 1274 1 to 643   tiling clone, also hits gene deyflerby 643/664
(96 %)
33 diff
(95.1 %id)
AA083968   .n-u 1001 to 1310 1 to 309   tiling clone,   309/309
(100 %)
1 diff
(99.7 %id)
BQ882424 Spleen .n-u 1181 to 1791 1 to 625 S30P G42W N43Q S44F V45C ... tiling clone,   625/1026
(60 %)
34 diff
(96.7 %id)
DB310330 substantia nigra .n-u 1512 to 2034 524 to 1   tiling clone,   524/525
(99 %)
7 diff
(98.7 %id)
AA083862   .n-u 1623 to 2037 412 to 1   tiling clone,   412/412
(100 %)
7 diff
(98.4 %id)
BG989501.
matches multiple genes
head_neck .o-u 1 to 524 537 to 10 G9R I10D G11R L12T Q13P ... tiling clone, also hits gene FAM66E, ZNF705D 528/543
(97 %)
0 diff
(100 %id)
BF089245 head_neck .o-u 16 to 456 1 to 439   tiling clone,   439/439
(100 %)
6 diff
(98.7 %id)
DN991291 brain, whole brain .o-u 176 to 836 1 to 660 exact tiling clone,   660/660
(100 %)
8 diff
(98.8 %id)
AI452744 pooled .o-u 322 to 798 479 to 3   tiling clone,   477/479
(99 %)
0 diff
(100 %id)
BG997745 head_neck .o-u 344 to 555 21 to 225       205/225
(91 %)
7 diff
(96.9 %id)
AV723783 hypothalamus .p 1 to 435 24 to 451   tiling clone,   428/456
(93 %)
10 diff
(97.9 %id)
AV723063 hypothalamus .p 2 to 400 1 to 392   tiling clone,   392/392
(100 %)
5 diff
(98.8 %id)
AW451516   .p 376 to 765 405 to 16 exact tiling clone, AAA   390/390
(100 %)
0 diff
(100 %id)
AI198079 anaplastic oligodendroglioma, brain .p 398 to 765 368 to 1 exact     368/368
(100 %)
4 diff
(99.0 %id)
DA716261   .q 1 to 577 9 to 587 R13L A14G L15P R16A R17Q ... tiling clone, capped   586/586
(100 %)
4 diff
(99.4 %id)
CN267871 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .r-u 1 to 381 1 to 381 exact tiling clone,   381/381
(100 %)
1 diff
(99.8 %id)
BF840921 head_neck .s-u 1 to 347 1 to 350 N3K C4M F5L L6P W7V ... tiling clone,   350/350
(100 %)
11 diff
(96.9 %id)
AK311411   Gene CLEC4AandZNF705AandFAM66C, variant not shown         This clone was ignored    
DA168624 amygdala Gene CLEC4AandZNF705AandFAM66C, variant not shown       capped      
DA189076 amygdala Gene CLEC4AandZNF705AandFAM66C, variant not shown       capped      
DA290347 hippocampus Gene CLEC4AandZNF705AandFAM66C, variant not shown       capped      
Z40468 brain, total brain Gene CLEC4AandZNF705AandFAM66C, variant not shown         This clone was ignored    
Z44592 brain, total brain Gene CLEC4AandZNF705AandFAM66C, variant not shown         This clone was ignored    
AV711676   Gene CLEC4AandZNF705AandFAM66C, variant not shown         Suspected internal deletion, this clone was ignored    
AV716802   Gene CLEC4AandZNF705AandFAM66C, variant not shown         Suspected internal deletion, this clone was ignored    
AV716725   Gene CLEC4AandZNF705AandFAM66C, variant not shown         Suspected internal deletion, this clone was ignored    
BE876458 large cell carcinoma, undifferentiated, lung Gene CLEC4AandZNF705AandFAM66C, variant not shown         This clone was ignored    
BI821512 pooled brain, lung, testis Gene CLEC4AandZNF705AandFAM66C, variant not shown         This clone was ignored    
BI824389 pooled brain, lung, testis Gene CLEC4AandZNF705AandFAM66C, variant not shown         This clone was ignored    
TI_57200664   Gene CLEC4AandZNF705AandFAM66C, variant not shown         This clone was ignored    
TI_57200807   Gene CLEC4AandZNF705AandFAM66C, variant not shown         This clone was ignored    
DA702375   Gene CLEC4AandZNF705AandFAM66C, variant not shown       capped      
DA728456   Gene CLEC4AandZNF705AandFAM66C, variant not shown       capped This clone was ignored    
DA739793   Gene CLEC4AandZNF705AandFAM66C, variant not shown       capped      
DA742244   Gene CLEC4AandZNF705AandFAM66C, variant not shown       capped      
DA944635 Spleen Gene CLEC4AandZNF705AandFAM66C, variant not shown       capped This clone was ignored    
DB333430 Spleen Gene CLEC4AandZNF705AandFAM66C, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h, .i, .j, .k, .l, .m, .n-u, .o-u, .p, .q, .r-u, .s-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI