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Gene CLEC3ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
35 supporting clones for gene CLEC3A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB209135 trachea .a 1 to 563 2 to 564   tiling clone, capped 563/563
(100 %)
3 diff
(99.5 %id)
AK313316 breast, tumor tissue .a 5 to 679 1 to 675 exact tiling clone, 675/675
(100 %)
0 diff
(100 %id)
NM_005752.3   .a 5 to 1938 1 to 1934 exact RefSeq, AAA 1934/1934
(100 %)
0 diff
(100 %id)
DN912556   .a 6 to 530 1 to 524     524/524
(100 %)
12 diff
(97.8 %id)
DA998903 breast, tumor tissue .a 6 to 579 2 to 575   capped 574/574
(100 %)
0 diff
(100 %id)
DA998640 breast, tumor tissue .a 8 to 584 2 to 579   capped 578/578
(100 %)
1 diff
(99.9 %id)
DB000390 breast, tumor tissue .a 8 to 538 2 to 532   capped 531/531
(100 %)
0 diff
(100 %id)
DB003680 breast, tumor tissue .a 8 to 571 2 to 565   capped 564/564
(100 %)
0 diff
(100 %id)
DB196272 trachea .a 8 to 533 2 to 527   capped 526/526
(100 %)
2 diff
(99.7 %id)
DB203006 trachea .a 8 to 579 2 to 573   capped 572/572
(100 %)
2 diff
(99.7 %id)
DB204254 trachea .a 8 to 583 2 to 577   capped 576/576
(100 %)
2 diff
(99.7 %id)
DB204845 trachea .a 8 to 572 2 to 566   capped 565/565
(100 %)
1 diff
(99.9 %id)
DB206941 trachea .a 8 to 547 2 to 541   capped 540/540
(100 %)
1 diff
(99.9 %id)
DB207236 trachea .a 8 to 609 2 to 603   capped 602/602
(100 %)
2 diff
(99.7 %id)
BC104414 PCR rescued clones .a 16 to 679 1 to 664 A166T   664/664
(100 %)
1 diff
(99.9 %id)
BC104415 PCR rescued clones .a 16 to 679 1 to 664 exact   664/664
(100 %)
0 diff
(100 %id)
AY358376   .a 53 to 1938 1 to 1886 Q206K tiling clone, AAA 1886/1886
(100 %)
3 diff
(99.9 %id)
BE872674 adenocarcinoma, colon .a 674 to 1274 1 to 595     595/905
(65 %)
19 diff
(98.0 %id)
CN480293 Knee, Osteoarthritic Cartilage .a 1139 to 1828 710 to 19   AAA 692/692
(100 %)
5 diff
(99.3 %id)
BQ181694 Knee, Osteoarthritic Cartilage .a 1215 to 1938 739 to 16   AAA 724/724
(100 %)
1 diff
(99.9 %id)
AW374095 breast .a 1286 to 1854 576 to 11     566/576
(98 %)
0 diff
(100 %id)
TI_154049465   .a 1294 to 1938 727 to 88   AAA 640/950
(67 %)
65 diff
(93.2 %id)
BQ309604 breast .a 1297 to 1626 1 to 330     330/380
(86 %)
7 diff
(98.2 %id)
AW374082 breast .a 1305 to 1853 550 to 5     546/550
(99 %)
0 diff
(100 %id)
CN480352 Knee, Osteoarthritic Cartilage .a 1331 to 1940 626 to 17   AAA 610/615
(99 %)
7 diff
(98.9 %id)
AI927004 normal prostate, Prostate .a 1386 to 1939 556 to 3   tiling clone, 554/556
(99 %)
0 diff
(100 %id)
BM992309 Bone, Subchondral Bone .a 1522 to 1938 434 to 19   AAA 416/416
(100 %)
1 diff
(99.8 %id)
AI085849   .a 1534 to 1944 409 to 2     408/409
(99 %)
0 diff
(100 %id)
AI867547 Prostate .a 1579 to 1939 364 to 3     362/364
(99 %)
0 diff
(100 %id)
CA413540 Chondrosarcoma Grade II, Left Pelvis .a 1640 to 1938 317 to 19   AAA 299/299
(100 %)
1 diff
(99.7 %id)
AA399390   .b 1 to 330 1 to 330   tiling clone, fully sequenced, 330/330
(100 %)
2 diff
(99.4 %id)
BX099834   .b 5 to 563 1 to 559 exact tiling clone, AAA 559/559
(100 %)
1 diff
(99.9 %id)
AA398015   .b 300 to 566 267 to 1   fully sequenced, 267/267
(100 %)
1 diff
(99.7 %id)
AK310847 trachea .c 1 to 1203 2 to 1204 exact tiling clone, 1204/1204
(100 %)
3 diff
(99.8 %id)
DB217292 trachea .c 1 to 544 2 to 545 exact capped 544/551
(98 %)
2 diff
(99.7 %id)
BE075355 breast .c 412 to 1039 9 to 635   tiling clone, 627/643
(97 %)
6 diff
(99.1 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C