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Gene CLDN9TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
16 supporting clones for gene CLDN9 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK091002 brain .a-u 1 to 2049 2 to 2050 E111* tiling clone, available from FLJ,   2050/2050
(100 %)
3 diff
(99.9 %id)
NM_020982.3   .a-u 1 to 2049 2 to 2050 exact RefSeq, AAA   2050/2050
(100 %)
0 diff
(100 %id)
DA199168 brain .a-u 1 to 568 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
AY390431   .a-u 253 to 603 1 to 351       351/351
(100 %)
0 diff
(100 %id)
CN309083 embryonic stem cells, DMSO-treated H9 cellline .a-u 475 to 1075 41 to 642       602/642
(93 %)
6 diff
(99.1 %id)
BE264576 lung, small cell carcinoma .a-u 632 to 1324 1 to 693       693/769
(90 %)
11 diff
(98.6 %id)
BC065830 Pituitary .a-u 672 to 2049 1 to 1378 exact tiling clone, available from MGC, AAA   1378/1378
(100 %)
0 diff
(100 %id)
CD105948 brain, Pituitary .a-u 673 to 1428 1 to 760       760/774
(98 %)
8 diff
(99.0 %id)
CF272562   .a-u 1151 to 1636 1 to 491       491/491
(100 %)
9 diff
(98.2 %id)
AI791760 carcinoid, lung .a-u 1442 to 1916 1 to 475       475/475
(100 %)
1 diff
(99.8 %id)
AI701514 carcinoid, lung .a-u 1494 to 2042 548 to 1       548/764
(71 %)
40 diff
(94.8 %id)
AI733439 carcinoid, lung .a-u 1503 to 2048 546 to 1       546/546
(100 %)
4 diff
(99.3 %id)
DB303912 brain .a-u 1524 to 2049 526 to 1       526/528
(99 %)
1 diff
(99.9 %id)
AA962246 carcinoid, lung .a-u 1661 to 2048 388 to 1       388/388
(100 %)
0 diff
(100 %id)
BE467695 carcinoid, lung .a-u 1708 to 2031 320 to 1       320/320
(100 %)
10 diff
(96.9 %id)
BC051870 Eye, retinoblastoma Gene CLDN9, variant not shown       available from MGC, AAA This clone was ignored    
BU167713 eye, retinoblastoma Gene CLDN9, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes DC