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Gene CLDN1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
421 supporting clones for gene CLDN1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB282639 uterus .a 1 to 551 2 to 552   tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
BP351214   .a 489 to 1069 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BP351268   .a 489 to 1071 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
BX490230   .a 515 to 718 1 to 203       203/203
(100 %)
12 diff
(94.1 %id)
NM_021101.4   .a 518 to 3969 1 to 3452 exact RefSeq,   3452/3452
(100 %)
0 diff
(100 %id)
DC369202   .a 518 to 1017 1 to 500       500/500
(100 %)
0 diff
(100 %id)
DC369302   .a 518 to 1076 1 to 562       562/562
(100 %)
4 diff
(99.3 %id)
DC369316   .a 518 to 1077 1 to 561       561/561
(100 %)
2 diff
(99.7 %id)
DC394047 esophageal, tumor tissue .a 518 to 1093 1 to 576       576/576
(100 %)
2 diff
(99.7 %id)
DC413027 liver, tumor tissue .a 518 to 1076 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
DC416637 trachea .a 518 to 1088 1 to 572       572/572
(100 %)
2 diff
(99.7 %id)
DC416818 trachea .a 518 to 1063 1 to 546       546/546
(100 %)
0 diff
(100 %id)
DC417055 trachea .a 518 to 1063 1 to 544       544/544
(100 %)
2 diff
(99.7 %id)
DC417081 trachea .a 518 to 1092 1 to 575       575/575
(100 %)
2 diff
(99.7 %id)
DC418155 trachea .a 518 to 1079 1 to 562       562/562
(100 %)
2 diff
(99.7 %id)
DC418434 trachea .a 518 to 1082 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DC418543 trachea .a 518 to 1020 1 to 505       505/505
(100 %)
2 diff
(99.7 %id)
DC418966 trachea .a 518 to 1111 1 to 595       595/595
(100 %)
1 diff
(99.9 %id)
DC422745 uterus .a 518 to 1061 1 to 545       545/545
(100 %)
4 diff
(99.3 %id)
DC423770 uterus .a 518 to 1090 7 to 579       573/579
(98 %)
6 diff
(99.0 %id)
AU100297   .a 518 to 817 1 to 300       300/300
(100 %)
1 diff
(99.7 %id)
AU108063   .a 518 to 567 1 to 50       50/50
(100 %)
0 diff
(100 %id)
DC369359   .a 519 to 1097 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DA907275   .a 519 to 1069 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
BP351172   .a 519 to 1101 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BP351205   .a 519 to 997 1 to 480       480/583
(82 %)
20 diff
(96.6 %id)
DC416955 trachea .a 519 to 1093 1 to 575       575/575
(100 %)
2 diff
(99.7 %id)
DC299958   .a 520 to 1097 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
DC367649   .a 520 to 1083 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC369858   .a 520 to 1098 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DC386218   .a 520 to 1075 1 to 556       556/556
(100 %)
2 diff
(99.7 %id)
DC386655   .a 520 to 1066 1 to 547       547/547
(100 %)
0 diff
(100 %id)
DC418319 trachea .a 520 to 1092 1 to 575       575/575
(100 %)
3 diff
(99.5 %id)
DC418394 trachea .a 520 to 1020 1 to 501       501/501
(100 %)
1 diff
(99.9 %id)
DC300689 bladder .a 521 to 1090 1 to 570       570/570
(100 %)
2 diff
(99.7 %id)
DC368527   .a 521 to 1093 1 to 573       573/573
(100 %)
1 diff
(99.9 %id)
DC369811   .a 521 to 1061 1 to 541       541/541
(100 %)
2 diff
(99.7 %id)
DC382384 placenta .a 521 to 1095 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
DC386160   .a 521 to 1077 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
DC409073 thymus .a 521 to 977 1 to 457       457/457
(100 %)
0 diff
(100 %id)
DC416000 trachea .a 521 to 1055 1 to 538       538/538
(100 %)
6 diff
(98.9 %id)
DC416727 trachea .a 521 to 1080 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
DC417421 trachea .a 521 to 1110 1 to 590       590/590
(100 %)
0 diff
(100 %id)
DC417648 trachea .a 521 to 1104 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
DC417704 trachea .a 521 to 1080 1 to 561       561/565
(99 %)
4 diff
(99.3 %id)
DC418531 trachea .a 521 to 1095 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
DC418554 trachea .a 521 to 1077 1 to 557       557/557
(100 %)
1 diff
(99.9 %id)
DC419522 uterus, tumor tissue .a 521 to 1020 1 to 500       500/500
(100 %)
0 diff
(100 %id)
DC422397 uterus .a 521 to 1060 1 to 540       540/540
(100 %)
0 diff
(100 %id)
DC423102 uterus .a 521 to 1058 1 to 538       538/538
(100 %)
2 diff
(99.7 %id)
DC423307 uterus .a 521 to 1060 1 to 540       540/540
(100 %)
1 diff
(99.9 %id)
AK312866 trachea .a 522 to 1393 1 to 872 exact     872/872
(100 %)
2 diff
(99.8 %id)
AL710728 human skeletal muscle .a 522 to 1080 1 to 559       559/559
(100 %)
3 diff
(99.5 %id)
DC416495 trachea .a 522 to 1091 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
AF134160   .a 523 to 1726 13 to 1216 exact AAA   1204/1216
(99 %)
11 diff
(99.1 %id)
DC300699 bladder .a 523 to 1086 1 to 564       564/564
(100 %)
1 diff
(99.9 %id)
DC301343 bladder .a 523 to 1083 1 to 561       561/561
(100 %)
3 diff
(99.5 %id)
DB473969 hippocampus .a 523 to 999 1 to 477       477/477
(100 %)
1 diff
(99.8 %id)
DC368682   .a 523 to 1077 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
DC369148   .a 523 to 1086 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC382665 placenta .a 523 to 1098 1 to 576       576/576
(100 %)
1 diff
(99.9 %id)
DC386499   .a 523 to 1086 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC386551   .a 523 to 913 1 to 391       391/391
(100 %)
0 diff
(100 %id)
DC415471 trachea .a 523 to 1013 1 to 492       492/492
(100 %)
1 diff
(99.8 %id)
DC415892 trachea .a 523 to 1100 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DC416144 trachea .a 523 to 1099 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
DC417066 trachea .a 523 to 1076 1 to 555       555/555
(100 %)
2 diff
(99.7 %id)
DC417220 trachea .a 523 to 1095 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC418121 trachea .a 523 to 1106 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
DC418158 trachea .a 523 to 1027 1 to 505       505/505
(100 %)
0 diff
(100 %id)
DC423616 uterus .a 523 to 1074 1 to 552       552/552
(100 %)
2 diff
(99.7 %id)
DC423926 uterus .a 523 to 1117 1 to 595       595/595
(100 %)
0 diff
(100 %id)
BX495908 Liver .a 524 to 1205 1 to 683       683/683
(100 %)
6 diff
(99.2 %id)
DA810244 brain .a 524 to 834 2 to 312   capped   311/311
(100 %)
1 diff
(99.7 %id)
DC418404 trachea .a 524 to 1063 9 to 548       540/540
(100 %)
0 diff
(100 %id)
H04030 placenta .a 532 to 914 5 to 392       388/451
(86 %)
25 diff
(94.5 %id)
BM051261 eye, normal pigmented retinal epithelium .a 536 to 1158 1 to 639       639/993
(64 %)
28 diff
(97.2 %id)
CR994141 T-Lymphocytes .a 537 to 1452 1 to 917 P194X P198X D209K Y210L V211R     917/917
(100 %)
3 diff
(99.7 %id)
AF101051   .a 538 to 3956 1 to 3417 exact tiling clone, AAA   3417/3417
(100 %)
14 diff
(99.6 %id)
BG285810 bladder, transitional cell papilloma, cell line .a 539 to 740 1 to 200       200/200
(100 %)
11 diff
(94.5 %id)
AF114837   .a 540 to 1712 14 to 1186 Q57T S58G L127F     1173/1186
(98 %)
13 diff
(99.0 %id)
AY358652   .a 540 to 3286 1 to 2747 exact     2747/2747
(100 %)
8 diff
(99.8 %id)
BQ641744 eye, normal pigmented retinal epithelium .a 540 to 1362 1 to 825       825/936
(88 %)
11 diff
(98.9 %id)
BX283869 adenocarcinoma cell line, colon .a 543 to 1039 1 to 497       497/497
(100 %)
1 diff
(99.8 %id)
BG747069 adenocarcinoma cell line, colon .a 543 to 1219 1 to 673       673/673
(100 %)
12 diff
(98.3 %id)
CV572838 cornea, eye .a 545 to 1120 1 to 576       576/576
(100 %)
0 diff
(100 %id)
BQ923351 eye, normal pigmented retinal epithelium .a 547 to 1422 1 to 883 T190Q T191P S192L Y193T R197G ...     883/901
(98 %)
19 diff
(97.9 %id)
DR005269 Prostate .a 553 to 1282 1 to 730       730/730
(100 %)
5 diff
(99.4 %id)
DA852614 placenta .a 559 to 1092 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
BC012471 Bladder, transitional cell papilloma .a 560 to 1816 1 to 1257 exact available from MGC, AAA   1257/1257
(100 %)
1 diff
(100.0 %id)
BG286357 bladder, transitional cell papilloma, cell line .a 560 to 740 1 to 181       181/181
(100 %)
0 diff
(100 %id)
DB220035 trachea .a 563 to 1118 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB217923 trachea .a 570 to 1031 2 to 464   capped   463/463
(100 %)
1 diff
(99.8 %id)
BU153383 large cell carcinoma, lung .a 574 to 1387 1 to 816       816/925
(88 %)
12 diff
(98.8 %id)
DA461297 tongue, tumor tissue .a 605 to 1175 2 to 575   capped   574/574
(100 %)
4 diff
(99.4 %id)
BI008987 kidney_tumor .a 607 to 976 372 to 3       370/372
(99 %)
0 diff
(100 %id)
DA860600 placenta .a 648 to 1210 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
AA305424 colon .a 678 to 978 1 to 301       301/301
(100 %)
5 diff
(98.4 %id)
AW960418   .a 686 to 1264 1 to 579       579/579
(100 %)
10 diff
(98.3 %id)
DB228056 trachea .a 730 to 1302 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
CA450361 Human Lung Epithelial cells, lung .a 732 to 1346 625 to 11   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 615/625
(98 %)
1 diff
(99.9 %id)
BM846598 myeloma .a 740 to 978 1 to 239       239/239
(100 %)
2 diff
(99.2 %id)
AF115546   .a 748 to 1393 1 to 646 I62V V135A     646/646
(100 %)
4 diff
(99.4 %id)
TI_1948099755   .a 757 to 1195 127 to 565       439/465
(94 %)
7 diff
(98.5 %id)
TI_1948099925   .a 757 to 1185 131 to 559       429/457
(93 %)
7 diff
(98.5 %id)
TI_1948100272   .a 757 to 1241 136 to 620       485/513
(94 %)
7 diff
(98.7 %id)
CR457138   .a 758 to 1389 1 to 632       632/636
(99 %)
2 diff
(99.7 %id)
CV025092 mixed .a 758 to 1335 1 to 577       577/577
(100 %)
8 diff
(98.7 %id)
EF564137   .a 758 to 1393 1 to 636 exact     636/636
(100 %)
1 diff
(99.9 %id)
TI_149297827   .a 793 to 1731 1013 to 85   AAA   929/958
(96 %)
16 diff
(98.4 %id)
CN358980 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 903 to 1363 1 to 460       460/460
(100 %)
5 diff
(99.0 %id)
AW607780 head_neck .a 952 to 1324 378 to 2       377/378
(99 %)
8 diff
(97.9 %id)
AA484795 Liver .a 974 to 1441 474 to 7       468/480
(97 %)
5 diff
(99.0 %id)
BF747974 breast_normal .a 991 to 1396 437 to 36     Submitted on the opposite strand 402/437
(91 %)
1 diff
(99.8 %id)
AW089881 ovary, tumor, 5 pooled (see description) .a 1001 to 1509 510 to 1       510/522
(97 %)
3 diff
(99.5 %id)
BM982831 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1020 to 1731 725 to 14   AAA   712/712
(100 %)
0 diff
(100 %id)
BF971178 adrenal cortex carcinoma, cell line, adrenal gland .a 1041 to 1688 1 to 647       647/960
(67 %)
10 diff
(99.0 %id)
AA375883 lung .a 1056 to 1219 1 to 164       164/168
(97 %)
5 diff
(97.1 %id)
AW366425 head_neck .a 1097 to 1372 1 to 276       276/276
(100 %)
9 diff
(96.8 %id)
AI801638 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 1098 to 1734 639 to 1       639/639
(100 %)
22 diff
(96.6 %id)
BM760666 lymph node, stomach .a 1202 to 1711 1 to 510       510/510
(100 %)
1 diff
(99.9 %id)
AI452474 pooled .a 1222 to 1944 722 to 1       722/731
(98 %)
40 diff
(94.6 %id)
AI700113 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 1286 to 1726 458 to 18   AAA   441/441
(100 %)
5 diff
(98.9 %id)
AI220875 placenta .a 1293 to 1744 454 to 1       454/454
(100 %)
10 diff
(97.8 %id)
H03348 placenta .a 1331 to 1712 385 to 1       385/385
(100 %)
6 diff
(98.5 %id)
AA375432 lung .a 1341 to 1631 1 to 293       293/293
(100 %)
2 diff
(99.4 %id)
BE161880 head_neck .a 1349 to 1685 1 to 337       337/337
(100 %)
6 diff
(98.3 %id)
BG287071 bladder, transitional cell papilloma, cell line .a 1349 to 1988 1 to 644       644/1134
(56 %)
21 diff
(98.2 %id)
CV574260 cornea, eye .a 1407 to 2023 1 to 617   tiling clone,   617/617
(100 %)
0 diff
(100 %id)
CV572965 cornea, eye .a 1419 to 2003 1 to 585       585/585
(100 %)
4 diff
(99.4 %id)
BP267454 thyroid .a 1439 to 2018 1 to 580       580/580
(100 %)
4 diff
(99.4 %id)
AI392810 B-cell, chronic lymphotic leukemia .a 1445 to 1781 337 to 1       337/337
(100 %)
1 diff
(99.8 %id)
AL692254   .a 1466 to 1855 8 to 397       390/390
(100 %)
4 diff
(99.0 %id)
BG403620 bladder, transitional cell papilloma, cell line .a 1470 to 2288 1 to 799       799/955
(83 %)
30 diff
(96.9 %id)
H95362 liver and spleen .a 1515 to 1730 216 to 1       216/216
(100 %)
0 diff
(100 %id)
BG288317 bladder, transitional cell papilloma, cell line .a 1524 to 2276 1 to 741       741/953
(77 %)
25 diff
(97.4 %id)
DA036765 breast .a 1576 to 2152 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
AL692666   .a 1596 to 2046 9 to 459       451/459
(98 %)
6 diff
(98.7 %id)
BG289513 bladder, transitional cell papilloma, cell line .a 1600 to 2335 1 to 730       730/943
(77 %)
26 diff
(97.3 %id)
BG291483 bladder, transitional cell papilloma, cell line .a 1634 to 2398 1 to 755       755/755
(100 %)
24 diff
(96.9 %id)
CV575808 cornea, eye .a 1635 to 2252 1 to 618       618/618
(100 %)
3 diff
(99.6 %id)
BX506513 Liver .a 1646 to 2372 1 to 726       726/726
(100 %)
9 diff
(98.8 %id)
DB268245 uterus .a 1705 to 2263 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DR422221 eye, Pterygium .a 1763 to 2215 1 to 453       453/453
(100 %)
2 diff
(99.6 %id)
BF310878 brain, neuroblastoma .a 1813 to 2388 1 to 569       569/827
(68 %)
27 diff
(96.8 %id)
BE813807 breast_normal .a 1853 to 2271 9 to 427       419/427
(98 %)
6 diff
(98.6 %id)
DA041692 bladder .a 1860 to 2424 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
AW387748 stomach .a 1861 to 2336 482 to 1       482/482
(100 %)
19 diff
(96.1 %id)
DB196700 trachea .a 1861 to 2439 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BG697268 skin .a 1875 to 2578 1 to 703       703/705
(99 %)
2 diff
(99.8 %id)
CA312297 Human Lung Epithelial cells, lung .a 1884 to 2435 569 to 16   AAA   554/563
(98 %)
2 diff
(99.7 %id)
BE163638 head_neck .a 1894 to 2394 5 to 507       503/507
(99 %)
6 diff
(98.9 %id)
BE163843 head_neck .a 1896 to 2085 16 to 206       191/207
(92 %)
6 diff
(97.2 %id)
BE163868 head_neck .a 1896 to 2168 5 to 277       273/277
(98 %)
6 diff
(97.9 %id)
BE163871 head_neck .a 1897 to 2195 315 to 16     Submitted on the opposite strand 300/322
(93 %)
0 diff
(100 %id)
BE163713 head_neck .a 1910 to 2156 250 to 5     Submitted on the opposite strand 246/250
(98 %)
0 diff
(100 %id)
BE163851 head_neck .a 1911 to 2183 284 to 7     Submitted on the opposite strand 278/284
(97 %)
22 diff
(92.3 %id)
BE163866 head_neck .a 1911 to 2268 379 to 19     Submitted on the opposite strand 361/379
(95 %)
0 diff
(100 %id)
BF351196 head_neck .a 1911 to 2183 282 to 6       277/282
(98 %)
13 diff
(95.4 %id)
BE163767 head_neck .a 1913 to 2168 1 to 257       257/257
(100 %)
6 diff
(97.7 %id)
AI889132 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1915 to 2410 498 to 3       496/498
(99 %)
0 diff
(100 %id)
BE163787 head_neck .a 1916 to 2168 1 to 252       252/252
(100 %)
2 diff
(99.3 %id)
BE163785 head_neck .a 1920 to 2168 1 to 248       248/248
(100 %)
3 diff
(98.8 %id)
BF816482 colon_ins .a 1927 to 2373 445 to 1     Submitted on the opposite strand 445/445
(100 %)
3 diff
(99.4 %id)
BP269828 thyroid .a 1927 to 2508 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
DA828166 placenta .a 1953 to 2615 2 to 669   capped   668/671
(99 %)
13 diff
(98.1 %id)
DA904942   .a 1963 to 2520 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA904970   .a 1963 to 2521 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
BG289942 bladder, transitional cell papilloma, cell line .a 1972 to 2621 1 to 652       652/970
(67 %)
3 diff
(99.7 %id)
CR745780   .a 1978 to 2408 445 to 15   AAA Submitted on the opposite strand 431/431
(100 %)
0 diff
(100 %id)
BG150984 moderate to poorly differentiated invasivecarcinoma of the retromolar trigone, mouth .a 1989 to 2186 198 to 1       198/198
(100 %)
4 diff
(98.0 %id)
AI049558   .a 1992 to 2366 1 to 375     Submitted on the opposite strand 375/375
(100 %)
3 diff
(99.2 %id)
BG260020 bladder, transitional cell papilloma, cell line .a 1995 to 2760 1 to 774       774/878
(88 %)
21 diff
(97.7 %id)
AW631445 2 pooled high-grade transitional celltumors, genitourinary tract .a 2009 to 2445 1 to 437       437/437
(100 %)
0 diff
(100 %id)
BE930795 placenta_normal .a 2014 to 2543 1 to 531       531/531
(100 %)
2 diff
(99.7 %id)
DA833469 placenta .a 2020 to 2726 2 to 711   capped   710/714
(99 %)
15 diff
(97.9 %id)
AA598918   .a 2022 to 2413 393 to 2       392/393
(99 %)
0 diff
(100 %id)
BM764180 myeloma .a 2023 to 2122 1 to 101       101/101
(100 %)
1 diff
(99.1 %id)
BE163815 head_neck .a 2064 to 2168 105 to 1     Submitted on the opposite strand 105/105
(100 %)
0 diff
(100 %id)
AW663234 2 pooled high-grade transitional celltumors, genitourinary tract .a 2069 to 2526 1 to 460       460/463
(99 %)
4 diff
(99.2 %id)
DR423084 eye, Pterygium .a 2081 to 2812 1 to 732       732/732
(100 %)
0 diff
(100 %id)
CV570702 cornea, eye .a 2162 to 2290 1 to 129       129/129
(100 %)
0 diff
(100 %id)
BE002247 breast_normal .a 2167 to 2548 391 to 9     Submitted on the opposite strand 383/394
(97 %)
0 diff
(100 %id)
AW995349 breast_normal .a 2178 to 2681 1 to 505       505/505
(100 %)
8 diff
(98.5 %id)
AW995358 breast_normal .a 2179 to 2697 1 to 517       517/517
(100 %)
8 diff
(98.5 %id)
AW995142 breast_normal .a 2186 to 2730 10 to 553       544/553
(98 %)
6 diff
(99.0 %id)
AW995355 breast_normal .a 2189 to 2695 1 to 506       506/506
(100 %)
5 diff
(99.1 %id)
AW995343 breast_normal .a 2191 to 2696 16 to 518       503/518
(97 %)
6 diff
(98.9 %id)
AW995345 breast_normal .a 2191 to 2684 1 to 493       493/493
(100 %)
4 diff
(99.2 %id)
AW995350 breast_normal .a 2191 to 2690 8 to 504       497/504
(98 %)
4 diff
(99.3 %id)
AW995354 breast_normal .a 2191 to 2687 9 to 504     Suspected internal deletion 997/504
(197 %)
10 diff
(98.1 %id)
BE813796 breast_normal .a 2191 to 2634 1 to 442       442/442
(100 %)
5 diff
(98.9 %id)
BQ310878 breast_normal .a 2191 to 2682 17 to 510       494/510
(96 %)
6 diff
(98.9 %id)
AW795403 uterus .a 2192 to 2821 10 to 639       630/640
(98 %)
4 diff
(99.4 %id)
AW995340 breast_normal .a 2193 to 2685 1 to 491       491/491
(100 %)
3 diff
(99.4 %id)
CU453366 epidermis .a 2196 to 2464 19 to 287       269/298
(90 %)
6 diff
(98.0 %id)
AW995583 breast_normal .a 2198 to 2421 226 to 1     Submitted on the opposite strand 226/226
(100 %)
4 diff
(98.3 %id)
BE813842 breast_normal .a 2209 to 2616 18 to 423       406/423
(95 %)
6 diff
(98.6 %id)
AA350837 brain .a 2211 to 2583 1 to 375       375/380
(98 %)
2 diff
(99.5 %id)
BQ311990 breast_normal .a 2214 to 2647 6 to 439       434/439
(98 %)
9 diff
(98.0 %id)
BP227094   .a 2218 to 2798 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
BP226523   .a 2227 to 2807 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DA705507   .a 2231 to 2768 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
CB161119 Liver .a 2235 to 2861 1 to 626       626/626
(100 %)
1 diff
(99.9 %id)
BP228294   .a 2296 to 2876 1 to 580       580/580
(100 %)
3 diff
(99.5 %id)
AW795408 uterus .a 2315 to 2953 651 to 14       638/655
(97 %)
0 diff
(100 %id)
BG287603 bladder, transitional cell papilloma, cell line .a 2318 to 3066 1 to 750       750/921
(81 %)
21 diff
(97.8 %id)
BM831649 lymph node, stomach .a 2319 to 2710 1 to 392       392/392
(100 %)
3 diff
(99.3 %id)
BF971063 adrenal cortex carcinoma, cell line, adrenal gland .a 2341 to 2960 18 to 649       632/1047
(60 %)
36 diff
(96.6 %id)
BG290540 bladder, transitional cell papilloma, cell line .a 2341 to 3155 1 to 818       818/884
(92 %)
43 diff
(95.2 %id)
H51735 liver and spleen .a 2374 to 2835 1 to 467       467/468
(99 %)
9 diff
(98.1 %id)
TI_149305095   .a 2375 to 3286 981 to 86   AAA   896/959
(93 %)
27 diff
(97.2 %id)
AW995574 breast_normal .a 2380 to 2800 420 to 1     Submitted on the opposite strand 420/420
(100 %)
1 diff
(99.8 %id)
AW995401 breast_normal .a 2401 to 2843 447 to 4     Submitted on the opposite strand 444/447
(99 %)
0 diff
(100 %id)
BP256329 Kidney .a 2402 to 2986 1 to 585       585/585
(100 %)
0 diff
(100 %id)
BG945149 amnion_normal .a 2417 to 2761 364 to 21       344/365
(94 %)
0 diff
(100 %id)
BG945196 amnion_normal .a 2422 to 2800 1 to 379       379/387
(97 %)
8 diff
(98.0 %id)
BG945310 amnion_normal .a 2424 to 2800 3 to 379       377/387
(97 %)
7 diff
(98.2 %id)
BQ292489 amnion_normal .a 2426 to 2795 379 to 9       371/385
(96 %)
0 diff
(100 %id)
BG000655 placenta_normal .a 2428 to 2878 44 to 496       453/496
(91 %)
9 diff
(98.2 %id)
BG945126 amnion_normal .a 2428 to 2770 339 to 1       339/351
(96 %)
8 diff
(97.8 %id)
AW995272 breast_normal .a 2430 to 2833 13 to 416       404/416
(97 %)
6 diff
(98.6 %id)
BX507101 Liver .a 2454 to 3129 1 to 678       678/679
(99 %)
3 diff
(99.6 %id)
BF082092 breast_normal .a 2489 to 2929 1 to 441       441/441
(100 %)
5 diff
(98.9 %id)
AW995400 breast_normal .a 2504 to 2953 463 to 14     Submitted on the opposite strand 450/463
(97 %)
0 diff
(100 %id)
BP226650   .a 2508 to 3090 1 to 583       583/583
(100 %)
0 diff
(100 %id)
AW995407 breast_normal .a 2514 to 2811 305 to 5     Submitted on the opposite strand 301/305
(98 %)
0 diff
(100 %id)
AW995580 breast_normal .a 2516 to 2953 450 to 13     Submitted on the opposite strand 438/450
(97 %)
0 diff
(100 %id)
AW995513 breast_normal .a 2518 to 2943 423 to 1     Submitted on the opposite strand 423/423
(100 %)
3 diff
(99.3 %id)
AW995569 breast_normal .a 2520 to 2953 444 to 11     Submitted on the opposite strand 434/444
(97 %)
0 diff
(100 %id)
AW995586 breast_normal .a 2524 to 2953 442 to 13     Submitted on the opposite strand 430/442
(97 %)
0 diff
(100 %id)
AW995587 breast_normal .a 2524 to 2953 440 to 13     Submitted on the opposite strand 428/440
(97 %)
0 diff
(100 %id)
AW995405 breast_normal .a 2527 to 2950 441 to 18     Submitted on the opposite strand 424/441
(96 %)
0 diff
(100 %id)
AW995572 breast_normal .a 2528 to 2953 438 to 14     Submitted on the opposite strand 425/438
(97 %)
0 diff
(100 %id)
AW995581 breast_normal .a 2529 to 2953 437 to 14     Submitted on the opposite strand 424/437
(97 %)
0 diff
(100 %id)
AW995582 breast_normal .a 2532 to 2953 433 to 13     Submitted on the opposite strand 421/433
(97 %)
0 diff
(100 %id)
CV570243 cornea, eye .a 2532 to 3144 1 to 613       613/613
(100 %)
2 diff
(99.7 %id)
AW995397 breast_normal .a 2534 to 2953 434 to 15     Submitted on the opposite strand 420/434
(96 %)
0 diff
(100 %id)
AW995573 breast_normal .a 2537 to 2989 460 to 10     Submitted on the opposite strand 451/460
(98 %)
0 diff
(100 %id)
AW995590 breast_normal .a 2537 to 2953 428 to 13     Submitted on the opposite strand 416/428
(97 %)
0 diff
(100 %id)
BP226206   .a 2545 to 3126 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BG753409 eye, normal pigmented retinal epithelium .a 2546 to 3289 1 to 738       738/740
(99 %)
13 diff
(98.3 %id)
AW995357 breast_normal .a 2554 to 2948 30 to 424       395/424
(93 %)
6 diff
(98.6 %id)
BG261039 bladder, transitional cell papilloma, cell line .a 2567 to 3213 1 to 650       650/927
(70 %)
11 diff
(98.9 %id)
AW884526 ovary .a 2568 to 2967 414 to 15       400/414
(96 %)
0 diff
(100 %id)
AW995584 breast_normal .a 2569 to 2947 379 to 1     Submitted on the opposite strand 379/379
(100 %)
3 diff
(99.3 %id)
AW995589 breast_normal .a 2584 to 2953 382 to 13     Submitted on the opposite strand 370/382
(96 %)
0 diff
(100 %id)
CN479056 Human Lung Epithelial cells, lung .a 2613 to 3286 689 to 16   AAA   674/674
(100 %)
2 diff
(99.8 %id)
BG286660 bladder, transitional cell papilloma, cell line .a 2635 to 3382 1 to 750       750/971
(77 %)
44 diff
(95.5 %id)
BE931737 head_neck .a 2647 to 2965 319 to 3       317/319
(99 %)
0 diff
(100 %id)
BU685497 lung, Primary Lung Epithelial Cells .a 2655 to 3286 647 to 16   AAA   632/632
(100 %)
3 diff
(99.6 %id)
BF744192 breast .a 2683 to 3292 618 to 13     Submitted on the opposite strand 606/665
(91 %)
0 diff
(100 %id)
BP226009   .a 2687 to 3256 1 to 572       572/572
(100 %)
2 diff
(99.7 %id)
BM888135 eye .a 2690 to 3002 1 to 303       303/522
(58 %)
12 diff
(97.8 %id)
BM761368 lymph node, stomach .a 2699 to 3346 1 to 648       648/648
(100 %)
3 diff
(99.6 %id)
BM844192 lymph node, stomach .a 2699 to 3150 1 to 452       452/452
(100 %)
1 diff
(99.8 %id)
CB242383 Human Lung Epithelial cells, lung .a 2701 to 3355 668 to 15   AAA   654/654
(100 %)
2 diff
(99.7 %id)
BM763961 myeloma .a 2704 to 3396 1 to 693       693/693
(100 %)
5 diff
(99.3 %id)
BM843992 lymph node, stomach .a 2705 to 2849 5 to 151       147/151
(97 %)
6 diff
(96.1 %id)
BE930855 placenta_normal .a 2708 to 3162 455 to 1       455/455
(100 %)
5 diff
(99.0 %id)
BE930856 placenta_normal .a 2708 to 3128 422 to 1       422/422
(100 %)
7 diff
(98.4 %id)
BE930811 placenta_normal .a 2719 to 3186 1 to 465       465/465
(100 %)
5 diff
(99.0 %id)
AW995344 breast_normal .a 2733 to 2953 1 to 217       217/221
(98 %)
6 diff
(97.3 %id)
BE930808 placenta_normal .a 2740 to 3186 14 to 459       446/459
(97 %)
6 diff
(98.7 %id)
BF888858 testis_normal .a 2765 to 2990 1 to 229       229/229
(100 %)
15 diff
(93.5 %id)
CA310603 Human Lung Epithelial cells, lung .a 2766 to 3475 728 to 19   AAA   710/710
(100 %)
1 diff
(99.9 %id)
T11196   .a 2781 to 2978 1 to 198       198/198
(100 %)
0 diff
(100 %id)
W51940 Pancreas, pancreatic islet .a 2782 to 3360 1 to 576       576/577
(99 %)
12 diff
(98.0 %id)
T34970 Pancreas .a 2789 to 3070 1 to 282       282/285
(98 %)
3 diff
(99.0 %id)
AW960134   .a 2790 to 3400 1 to 612       612/619
(98 %)
22 diff
(96.5 %id)
BG289620 bladder, transitional cell papilloma, cell line .a 2790 to 3273 303 to 786       484/924
(52 %)
6 diff
(99.4 %id)
BE000261 breast_normal .a 2820 to 3176 1 to 360       360/360
(100 %)
21 diff
(94.2 %id)
BJ993396 hepatoblastoma .a 2823 to 3250 428 to 1       428/428
(100 %)
2 diff
(99.6 %id)
AW130664 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 2823 to 3266 445 to 1       445/445
(100 %)
7 diff
(98.5 %id)
AW117964 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 2836 to 3287 452 to 1       452/452
(100 %)
2 diff
(99.6 %id)
BI964702 Islets of Langerhans, Pancreas .a 2879 to 3397 1 to 519       519/519
(100 %)
5 diff
(99.1 %id)
EL595217 epidermis, skin .a 2884 to 3327 1 to 441       441/442
(99 %)
19 diff
(95.8 %id)
CK819775 Islets of Langerhans, Pancreas .a 2887 to 3478 1 to 592   tiling clone,   592/592
(100 %)
0 diff
(100 %id)
BM763952 myeloma .a 2890 to 2996 1 to 106       106/106
(100 %)
5 diff
(95.3 %id)
BF792886 adrenal cortex carcinoma, cell line, adrenal gland .a 2901 to 3576 1 to 676       676/902
(74 %)
11 diff
(98.8 %id)
BM141921 Islets of Langerhans, Pancreas .a 2903 to 3434 1 to 532       532/532
(100 %)
0 diff
(100 %id)
AA010460 heart .a 2908 to 3223 1 to 323       323/363
(88 %)
10 diff
(97.3 %id)
BX406398 fetal liver, Liver .a 2920 to 3925 994 to 1       994/1066
(93 %)
24 diff
(97.8 %id)
BF887620 testis_normal .a 2949 to 3261 311 to 1     Submitted on the opposite strand 311/311
(100 %)
4 diff
(98.8 %id)
BI222326 cervical carcinoma cell line, cervix .a 2951 to 3637 1 to 687       687/687
(100 %)
5 diff
(99.3 %id)
BU752045 placenta .a 2954 to 3286 347 to 15   AAA   333/333
(100 %)
3 diff
(99.1 %id)
BM782836 myeloma .a 2957 to 3372 1 to 417       417/417
(100 %)
9 diff
(97.9 %id)
BM850073 myeloma .a 2957 to 3553 1 to 597       597/597
(100 %)
5 diff
(99.2 %id)
AW264707 lung, two pooled squamous cell carcinomas .a 2976 to 3287 312 to 1       312/312
(100 %)
2 diff
(99.4 %id)
BP228284   .a 2979 to 3560 1 to 581       581/581
(100 %)
10 diff
(98.3 %id)
BG260413 bladder, transitional cell papilloma, cell line .a 2999 to 3036 582 to 619       580/619
(93 %)
9 diff
(98.6 %id)
AI868678 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3015 to 3293 313 to 35   AAA   279/286
(97 %)
5 diff
(98.3 %id)
BP227371   .a 3031 to 3611 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BM782862 myeloma .a 3078 to 3605 1 to 529       529/529
(100 %)
6 diff
(98.9 %id)
CB162428 Liver .a 3103 to 3748 1 to 646       646/646
(100 %)
5 diff
(99.3 %id)
BE818572 breast_normal .a 3126 to 3593 11 to 479       469/479
(97 %)
6 diff
(98.8 %id)
BM838724 lymph node, stomach .a 3128 to 3270 1 to 143       143/145
(98 %)
3 diff
(98.0 %id)
BE170672 head_neck .a 3133 to 3587 460 to 7     Submitted on the opposite strand 454/460
(98 %)
0 diff
(100 %id)
TI_159722107   .a 3139 to 3956 886 to 78   AAA   809/978
(82 %)
11 diff
(98.9 %id)
BQ933787 sciatic nerve .a 3148 to 3956 1 to 812   AAA   812/812
(100 %)
10 diff
(98.8 %id)
C21021   .a 3151 to 3287 1 to 137       137/137
(100 %)
1 diff
(99.3 %id)
AA011228 heart .a 3168 to 3554 1 to 391   fully sequenced,   391/391
(100 %)
6 diff
(98.5 %id)
AI133078 Liver .a 3171 to 3531 431 to 71   AAA   361/600
(60 %)
0 diff
(100 %id)
AA194833 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3173 to 3464 292 to 1       292/292
(100 %)
3 diff
(99.0 %id)
EL595200 epidermis, skin .a 3177 to 3890 717 to 15     Submitted on the opposite strand 703/762
(92 %)
0 diff
(100 %id)
TI_149310863   .a 3179 to 3956 863 to 95   AAA   769/927
(82 %)
36 diff
(96.2 %id)
BG119678 adenocarcinoma, cell line, Liver .a 3182 to 3934 1 to 760       760/767
(99 %)
21 diff
(97.3 %id)
BE815172 breast_normal .a 3190 to 3349 170 to 11       160/170
(94 %)
0 diff
(100 %id)
CB164105 Liver .a 3194 to 3786 1 to 593       593/593
(100 %)
5 diff
(99.2 %id)
BM127057 Islets of Langerhans, Pancreas .a 3199 to 3676 1 to 478   fully sequenced,   478/478
(100 %)
0 diff
(100 %id)
BG403428 bladder, transitional cell papilloma, cell line .a 3222 to 3890 1 to 676       676/1103
(61 %)
25 diff
(97.8 %id)
BG403435 bladder, transitional cell papilloma, cell line .a 3222 to 3937 1 to 709       709/789
(89 %)
11 diff
(98.7 %id)
TI_149272792   .a 3231 to 3964 818 to 89   AAA   730/954
(76 %)
38 diff
(96.1 %id)
TI_149306727   .a 3253 to 3956 792 to 92   AAA   701/931
(75 %)
8 diff
(99.2 %id)
TI_149279310   .a 3254 to 3956 784 to 84   AAA   701/701
(100 %)
8 diff
(98.9 %id)
AW629812 2 pooled high-grade transitional celltumors, genitourinary tract .a 3255 to 3741 10 to 496       487/496
(98 %)
6 diff
(98.8 %id)
AA234800 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3265 to 3536 1 to 272       272/272
(100 %)
3 diff
(98.9 %id)
CA311530 Human Lung Epithelial cells, lung .a 3272 to 3964 702 to 11   AAA   692/696
(99 %)
5 diff
(99.3 %id)
BM969499 lung, Primary Lung Epithelial Cells .a 3275 to 3956 698 to 19   AAA   680/680
(100 %)
6 diff
(99.2 %id)
BP228432   .a 3285 to 3869 1 to 586       586/586
(100 %)
1 diff
(99.9 %id)
CD676887 eye, Trabecular meshwork .a 3286 to 3890 1 to 605       605/605
(100 %)
0 diff
(100 %id)
AA436587 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3291 to 3629 1 to 339   fully sequenced,   339/339
(100 %)
4 diff
(98.9 %id)
TI_149282436   .a 3291 to 3956 745 to 81   AAA   665/1161
(57 %)
6 diff
(99.5 %id)
BM978792 lung, Primary Lung Epithelial Cells .a 3302 to 3956 673 to 19   AAA   655/655
(100 %)
4 diff
(99.4 %id)
CA944468 Human Lung Epithelial cells, lung .a 3302 to 3956 673 to 19   AAA   655/655
(100 %)
1 diff
(99.9 %id)
AF086514   .a 3309 to 3965 1 to 657   AAA   657/657
(100 %)
4 diff
(99.4 %id)
W99373 heart .a 3309 to 3743 14 to 456       443/517
(85 %)
21 diff
(96.0 %id)
BM983850 lung, Primary Lung Epithelial Cells .a 3318 to 3956 655 to 19   AAA   637/637
(100 %)
2 diff
(99.7 %id)
AA236119 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3327 to 3623 1 to 297   fully sequenced,   297/297
(100 %)
5 diff
(98.4 %id)
AA235776 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3329 to 3558 1 to 230       230/230
(100 %)
2 diff
(99.2 %id)
TI_149276497   .a 3357 to 3956 682 to 85   AAA   598/873
(68 %)
2 diff
(99.8 %id)
BU677148 lung, Primary Lung Epithelial Cells .a 3357 to 3956 616 to 19   AAA   598/611
(97 %)
2 diff
(99.7 %id)
CD357792 Pooled-Skin .a 3366 to 3955 1 to 592       592/635
(93 %)
6 diff
(99.1 %id)
AA702177 liver and spleen .a 3374 to 3956 583 to 1       583/583
(100 %)
8 diff
(98.7 %id)
CK819774 Islets of Langerhans, Pancreas .a 3386 to 3960 575 to 1   tiling clone,   575/575
(100 %)
0 diff
(100 %id)
BU539933 mixed (pool of 40 RNAs) .a 3395 to 3956 1 to 565       565/566
(99 %)
14 diff
(97.6 %id)
TI_157594355   .a 3406 to 3956 649 to 92   AAA   558/592
(94 %)
22 diff
(96.3 %id)
AA455891 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3415 to 3956 541 to 1       541/541
(100 %)
7 diff
(98.8 %id)
BM141663 Islets of Langerhans, Pancreas .a 3415 to 3960 546 to 1       546/546
(100 %)
0 diff
(100 %id)
BG289240 bladder, transitional cell papilloma, cell line .a 3419 to 3966 1 to 547   AAA   547/547
(100 %)
4 diff
(99.3 %id)
CB135130 Liver .a 3421 to 3924 504 to 1     Submitted on the opposite strand 504/504
(100 %)
2 diff
(99.7 %id)
BG289954 bladder, transitional cell papilloma, cell line .a 3433 to 3966 1 to 534       534/552
(96 %)
8 diff
(98.6 %id)
AI436200 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3435 to 3956 522 to 1       522/522
(100 %)
2 diff
(99.7 %id)
AW882397 ovary .a 3436 to 3648 44 to 256       213/260
(81 %)
6 diff
(97.7 %id)
BP331793 renal proximal tubule .a 3442 to 3962 1 to 521       521/564
(92 %)
6 diff
(99.0 %id)
BU675328 lung, Primary Lung Epithelial Cells .a 3447 to 3964 534 to 17   AAA   518/518
(100 %)
7 diff
(98.7 %id)
AI334234 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3448 to 3956 509 to 1       509/509
(100 %)
2 diff
(99.7 %id)
AW664403 2 pooled high-grade transitional celltumors, genitourinary tract .a 3448 to 3956 509 to 1       509/509
(100 %)
2 diff
(99.7 %id)
BU941705 mixed (pool of 40 RNAs) .a 3448 to 3956 1 to 510   AAA   510/510
(100 %)
6 diff
(98.9 %id)
CB243993 Human Lung Epithelial cells, lung .a 3448 to 3956 527 to 19   AAA   509/509
(100 %)
4 diff
(99.3 %id)
AW264065 brain, three pooled meningiomas .a 3450 to 3962 513 to 1       513/513
(100 %)
2 diff
(99.7 %id)
BF439412 pooled .a 3468 to 3959 492 to 1       492/492
(100 %)
2 diff
(99.6 %id)
BF111456 pooled .a 3468 to 3951 493 to 10       484/493
(98 %)
0 diff
(100 %id)
AI690432 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 3470 to 3956 487 to 1       487/487
(100 %)
2 diff
(99.6 %id)
AI803978 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3471 to 3956 504 to 19   AAA   486/486
(100 %)
1 diff
(99.8 %id)
AI224906 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3472 to 3957 486 to 1       486/486
(100 %)
2 diff
(99.6 %id)
BM977190 lung, Primary Lung Epithelial Cells .a 3475 to 3956 500 to 19   AAA   482/482
(100 %)
1 diff
(99.8 %id)
AI400155 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3483 to 3957 475 to 1       475/475
(100 %)
2 diff
(99.6 %id)
AI566326 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 3483 to 3955 473 to 1       473/473
(100 %)
2 diff
(99.6 %id)
AW074038 2 pooled high-grade transitional celltumors, genitourinary tract .a 3483 to 3963 481 to 1       481/481
(100 %)
2 diff
(99.6 %id)
AW085699 esophagus, squamous cell carcinoma .a 3483 to 3961 479 to 1       479/479
(100 %)
2 diff
(99.6 %id)
AW130258 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 3483 to 3955 474 to 1       474/474
(100 %)
6 diff
(98.8 %id)
AI141276 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3486 to 3957 470 to 1       470/470
(100 %)
5 diff
(99.0 %id)
AW304888 brain, three pooled meningiomas .a 3486 to 3956 471 to 1       471/471
(100 %)
2 diff
(99.6 %id)
BQ429232 testis .a 3486 to 3955 1 to 471       471/880
(53 %)
8 diff
(99.1 %id)
DB380215 placenta .a 3486 to 3956 474 to 1       474/474
(100 %)
12 diff
(97.5 %id)
AW960413   .a 3488 to 3944 457 to 1     Submitted on the opposite strand 457/457
(100 %)
22 diff
(95.2 %id)
AI141233 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3489 to 3960 471 to 1       471/471
(100 %)
6 diff
(98.8 %id)
AI433150 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 3505 to 3961 457 to 1       457/457
(100 %)
0 diff
(100 %id)
AA169619   .a 3509 to 3957 447 to 1       447/447
(100 %)
5 diff
(98.9 %id)
DB542760 hippocampus .a 3520 to 3965 1 to 446     Submitted on the opposite strand 446/446
(100 %)
3 diff
(99.4 %id)
AA010488 heart .a 3524 to 3957 436 to 1   fully sequenced,   436/436
(100 %)
8 diff
(98.2 %id)
AW733083 Kidney, renal cell adenocarcinoma .a 3549 to 3958 410 to 1       410/410
(100 %)
2 diff
(99.6 %id)
AI139925 heart .a 3550 to 3957 408 to 1       408/408
(100 %)
2 diff
(99.6 %id)
AI005483 pooled .a 3551 to 3955 406 to 1       406/406
(100 %)
3 diff
(99.3 %id)
AI300819 2 pooled tumors (clear cell type), Kidney .a 3551 to 3959 409 to 1       409/409
(100 %)
0 diff
(100 %id)
AA921786 pooled .a 3554 to 3959 406 to 1       406/406
(100 %)
0 diff
(100 %id)
W60150 Pancreas, pancreatic islet .a 3555 to 3956 405 to 1       405/420
(96 %)
5 diff
(98.9 %id)
AA677375 liver and spleen .a 3555 to 3956 401 to 1       401/401
(100 %)
3 diff
(99.3 %id)
AI015882   .a 3555 to 3966 415 to 4       412/415
(99 %)
0 diff
(100 %id)
AI040570 liver and spleen .a 3555 to 3956 401 to 1       401/401
(100 %)
1 diff
(99.8 %id)
AA234731 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3556 to 3957 402 to 1       402/402
(100 %)
2 diff
(99.6 %id)
AI086163 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3557 to 3966 410 to 1       410/410
(100 %)
4 diff
(99.1 %id)
DB372614 placenta .a 3560 to 3965 407 to 1       407/407
(100 %)
8 diff
(98.1 %id)
AI269908 Kidney .a 3561 to 3956 398 to 1       398/398
(100 %)
4 diff
(99.0 %id)
W99331 heart .a 3564 to 3966 409 to 1       409/409
(100 %)
9 diff
(97.8 %id)
AI350942 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3567 to 3956 393 to 1       393/393
(100 %)
10 diff
(97.5 %id)
AW779213 pooled .a 3568 to 3968 417 to 13   AAA   405/405
(100 %)
7 diff
(98.3 %id)
AI472850 pooled .a 3569 to 3960 392 to 1       392/392
(100 %)
2 diff
(99.5 %id)
AI572635 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 3573 to 3963 391 to 1       391/391
(100 %)
3 diff
(99.3 %id)
AW270738 brain, three pooled meningiomas .a 3581 to 3958 379 to 1       379/379
(100 %)
4 diff
(99.0 %id)
T33667 brain .a 3594 to 3965 374 to 1       374/375
(99 %)
4 diff
(99.0 %id)
AA436560 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3599 to 3958 360 to 1   fully sequenced,   360/360
(100 %)
2 diff
(99.5 %id)
AI332888 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3605 to 3956 369 to 18   AAA   352/352
(100 %)
4 diff
(98.9 %id)
AA236151 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3608 to 3815 208 to 1   fully sequenced,   208/208
(100 %)
1 diff
(99.6 %id)
T23903   .a 3615 to 3959 345 to 1       345/349
(98 %)
3 diff
(99.2 %id)
AI475259 colon, moderately-differentiated adenocarcinoma .a 3623 to 3958 336 to 1       336/336
(100 %)
1 diff
(99.8 %id)
AA610598 breast .a 3627 to 3956 330 to 1       330/330
(100 %)
3 diff
(99.1 %id)
T24022   .a 3632 to 3959 329 to 1       329/329
(100 %)
5 diff
(98.5 %id)
BM126752 Islets of Langerhans, Pancreas .a 3646 to 3956 331 to 21   fully sequenced, AAA   311/311
(100 %)
1 diff
(99.7 %id)
AI383373 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3650 to 3955 306 to 1       306/306
(100 %)
1 diff
(99.7 %id)
AI858215 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 3662 to 3956 309 to 15   AAA   295/295
(100 %)
0 diff
(100 %id)
AI925765 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 3664 to 3961 300 to 1       300/388
(77 %)
4 diff
(99.0 %id)
BU840135 epithelioid carcinoma cell line, Pancreas .a 3673 to 3963 151 to 441       291/338
(86 %)
2 diff
(99.5 %id)
AW132019 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 3686 to 3964 315 to 37   AAA   279/279
(100 %)
22 diff
(92.2 %id)
AW151354 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 3692 to 3957 269 to 1       269/269
(100 %)
7 diff
(97.4 %id)
AW189780 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 3699 to 3956 259 to 1       259/270
(95 %)
1 diff
(99.7 %id)
AI352027 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3737 to 3956 220 to 1       220/220
(100 %)
3 diff
(98.7 %id)
BG272449 head/neck, nasopharyngeal carcinoma .a 3746 to 3962 216 to 1       216/231
(93 %)
10 diff
(95.7 %id)
AA971674 pooled .a 3748 to 3968 232 to 12   tiling clone, AAA   221/221
(100 %)
1 diff
(99.6 %id)
BG151371 normal head/neck tissue .a 3754 to 3960 56 to 262       207/262
(79 %)
6 diff
(97.8 %id)
AA694107 liver and spleen .a 3773 to 3963 209 to 16       194/209
(92 %)
0 diff
(100 %id)
T03887   .a 3798 to 3959 163 to 1       163/169
(96 %)
4 diff
(97.7 %id)
N70207 liver and spleen .a 3813 to 3956 146 to 3       144/146
(98 %)
0 diff
(100 %id)
BP227879   .b-u 1 to 580 1 to 581 Q57H R83G P84H S85G R86Q ... tiling clone,   581/581
(100 %)
14 diff
(97.6 %id)
BQ355859 head_neck .c 1 to 432 436 to 4 exact tiling clone,   433/436
(99 %)
2 diff
(99.6 %id)
BG998023 head_neck .c 6 to 432 432 to 7 M35N V37C I38H G39W A41R ... tiling clone,   426/432
(98 %)
7 diff
(98.4 %id)
CD513483 brain, Pituitary .d-u 1 to 602 1 to 613 M40V L57F K58*     613/1072
(57 %)
12 diff
(98.9 %id)
CD519342 White Matter .d-u 1 to 766 1 to 770 exact tiling clone,   770/913
(84 %)
9 diff
(99.1 %id)
AI857801 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d-u 308 to 795 510 to 24 F14X I20Y F21S F22S T24L ... tiling clone,   487/510
(95 %)
0 diff
(100 %id)
BM846959 myeloma .d-u 626 to 1100 1 to 475       475/475
(100 %)
3 diff
(99.4 %id)
CD300779 White Matter .d-u 777 to 1240 1 to 468   tiling clone,   468/838
(55 %)
10 diff
(98.9 %id)
DB329015 placenta Gene CLDN1, variant not shown         This clone was ignored    
DA860166 placenta Gene CLDN1, variant not shown       capped This clone was ignored    
DC347568 tongue, tumor tissue Gene CLDN1, variant not shown         Suspected internal deletion, this clone was ignored    
AK225963 dermoid cancer Gene CLDN1, variant not shown       AAA This clone was ignored    
AK296934 tongue, tumor tissue Gene CLDN1, variant not shown         Suspected internal deletion, this clone was ignored    
T79392 liver and spleen Gene CLDN1, variant not shown         Suspected internal deletion, this clone was ignored    
T79822 liver and spleen Gene CLDN1, variant not shown         Suspected internal deletion, this clone was ignored    
AA195111 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus Gene CLDN1, variant not shown         Suspected internal deletion, this clone was ignored    
AI950113 2 pooled tumors (clear cell type), Kidney Gene CLDN1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
DB228233 trachea Gene CLDN1, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b-u, .c, .d-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI