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Gene CKS1BP3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
75 supporting clones for gene CKS1BP3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BF900364 marrow .a-u 1 to 347 1 to 346 F69Y tiling clone,   346/346
(100 %)
6 diff
(98.3 %id)
AA889955.
matches multiple genes
parathyroid gland, parathyroid tumor .a-u 54 to 772 715 to 1 H3N S9P D10T Y12* tiling clone, also hits gene CKS1BP2 715/723
(98 %)
41 diff
(94.4 %id)
BE972278 testis .a-u 54 to 649 13 to 605 F17L E18S Y19I R20D H21M ...     593/657
(90 %)
29 diff
(95.6 %id)
BG284862 adenocarcinoma, cell line, Prostate .a-u 54 to 789 15 to 737 exact tiling clone,   723/775
(93 %)
18 diff
(97.7 %id)
BI762210.
matches multiple genes
pooled colon, kidney, stomach .a-u 54 to 744 46 to 744 exact tiling clone, also hits gene CKS1BP2 699/882
(79 %)
14 diff
(98.5 %id)
TI_57151265   .a-u 54 to 744 81 to 779 exact     699/917
(76 %)
14 diff
(98.5 %id)
DW430722 Liver .a-u 72 to 275 17 to 220   AAA   204/220
(92 %)
6 diff
(97.3 %id)
BX432696 B cells (Ramos cell line) .a-u 82 to 746 668 to 1       668/852
(78 %)
18 diff
(97.9 %id)
W72395.
matches multiple genes
heart .a-u 88 to 752 666 to 1     also hits gene CKS1B 666/666
(100 %)
20 diff
(97.0 %id)
BX329489.
matches multiple genes
Neuroblastoma Cot 25-normalized .a-u 90 to 763 678 to 1     also hits gene CKS1BP2 678/767
(88 %)
31 diff
(96.0 %id)
AI422691 brain, glioblastoma (pooled) .a-u 92 to 770 672 to 1       672/672
(100 %)
25 diff
(96.3 %id)
BM916900.
matches multiple genes
amelanotic melanoma, cell line, skin .a-u 94 to 671 1 to 578   tiling clone, also hits gene CKS1B 578/1249
(46 %)
7 diff
(99.5 %id)
H98460.
matches multiple genes
melanocyte .a-u 100 to 465 1 to 374   tiling clone, also hits gene CKS1B 374/374
(100 %)
13 diff
(96.6 %id)
N31428.
matches multiple genes
melanocyte .a-u 100 to 434 1 to 334     also hits gene CKS1B 334/337
(99 %)
5 diff
(98.6 %id)
H68268.
matches multiple genes
liver and spleen .a-u 103 to 179 1 to 77     also hits gene CKS1B, CKS1BP2 77/77
(100 %)
0 diff
(100 %id)
H03265.
matches multiple genes
placenta .a-u 109 to 523 1 to 425     also hits gene CKS1B, CKS1BP2 425/434
(97 %)
16 diff
(96.4 %id)
BX428991 B cells (Ramos cell line) .a-u 112 to 743 634 to 3       632/850
(74 %)
12 diff
(98.6 %id)
BX432698.
matches multiple genes
B cells (Ramos cell line) .a-u 112 to 717 223 to 820     also hits gene CKS1BP2 598/855
(69 %)
64 diff
(92.6 %id)
BX435756 B cells (Ramos cell line) .a-u 112 to 756 642 to 1       642/875
(73 %)
9 diff
(99.0 %id)
BX432695 B cells (Ramos cell line) .a-u 113 to 761 650 to 1       650/788
(82 %)
18 diff
(97.8 %id)
AA293140.
matches multiple genes
ovarian tumor, ovary .a-u 122 to 549 1 to 427     also hits gene CKS1B, CKS1BP2 427/427
(100 %)
4 diff
(99.1 %id)
BF910357.
matches multiple genes
uterus_tumor .a-u 124 to 579 11 to 464     also hits gene CKS1B, CKS1BP2 454/464
(97 %)
6 diff
(98.8 %id)
AI865147.
matches multiple genes
lymph node, lymphoma, follicular mixed small and largecell .a-u 127 to 606 479 to 1     also hits gene CKS1B, CKS1BP2 479/479
(100 %)
17 diff
(96.5 %id)
AW514667.
matches multiple genes
moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a-u 129 to 606 480 to 1     also hits gene CKS1B, CKS1BP2 480/484
(99 %)
3 diff
(99.4 %id)
AA584410 colon, colon tumor RER+ .a-u 135 to 761 639 to 12       628/639
(98 %)
0 diff
(100 %id)
AA583187.
matches multiple genes
germ cell tumor .a-u 137 to 770 634 to 1     also hits gene CKS1BP2 634/634
(100 %)
7 diff
(98.9 %id)
AW104725 ovary, tumor, 5 pooled (see description) .a-u 140 to 606 467 to 1       467/529
(88 %)
26 diff
(95.1 %id)
AW024595.
matches multiple genes
Kidney .a-u 150 to 771 624 to 1     also hits gene CKS1BP2 624/628
(99 %)
28 diff
(95.6 %id)
AA876046.
matches multiple genes
colon, colon tumor RER+ .a-u 168 to 754 587 to 1     also hits gene CKS1BP2 587/587
(100 %)
40 diff
(93.2 %id)
AW613002.
matches multiple genes
colon, moderately-differentiated adenocarcinoma .a-u 173 to 606 433 to 1     also hits gene CKS1B, CKS1BP2 433/433
(100 %)
2 diff
(99.6 %id)
BG033485.
matches multiple genes
breast, mammary adenocarcinoma, cell line .a-u 180 to 760 28 to 606     also hits gene CKS1BP2 579/643
(90 %)
6 diff
(99.1 %id)
AA621337.
matches multiple genes
  .a-u 197 to 761 569 to 6     also hits gene CKS1B, CKS1BP2 564/569
(99 %)
0 diff
(100 %id)
AU149836.
matches multiple genes
  .a-u 202 to 764 564 to 1     also hits gene CKS1B 564/566
(99 %)
20 diff
(96.5 %id)
AA772418.
matches multiple genes
parathyroid gland, parathyroid tumor .a-u 204 to 761 564 to 6     also hits gene CKS1BP2 559/564
(99 %)
0 diff
(100 %id)
AU154749.
matches multiple genes
  .a-u 209 to 764 557 to 1     also hits gene CKS1B 557/557
(100 %)
9 diff
(98.4 %id)
AA662522.
matches multiple genes
normal prostate, Prostate .a-u 214 to 770 556 to 1     also hits gene CKS1BP2 556/643
(86 %)
14 diff
(97.9 %id)
N95210.
matches multiple genes
lung .a-u 222 to 767 547 to 1     also hits gene CKS1BP2 547/547
(100 %)
11 diff
(98.0 %id)
AA398727.
matches multiple genes
  .a-u 226 to 768 539 to 1     also hits gene CKS1B 539/551
(97 %)
15 diff
(97.3 %id)
BM753071.
matches multiple genes
stomach .a-u 226 to 757 1 to 532   AAA also hits gene CKS1BP2 532/539
(98 %)
12 diff
(97.8 %id)
AA932124.
matches multiple genes
Kidney .a-u 229 to 761 540 to 3   tiling clone, also hits gene CKS1A, CKS1BP1, CKS1BP2 538/540
(99 %)
0 diff
(100 %id)
AI094597.
matches multiple genes
brain, glioblastoma (pooled) .a-u 232 to 755 524 to 1     also hits gene CKS1BP2 524/524
(100 %)
9 diff
(98.3 %id)
R54703.
matches multiple genes
breast .a-u 233 to 567 1 to 336   fully sequenced, also hits gene CKS1B 336/336
(100 %)
6 diff
(98.3 %id)
H42079 breast .a-u 233 to 535 1 to 304   fully sequenced,   304/304
(100 %)
1 diff
(99.7 %id)
AA617681.
matches multiple genes
breast .a-u 238 to 768 528 to 2     also hits gene CKS1BP2 527/528
(99 %)
0 diff
(100 %id)
BF507531.
matches multiple genes
  .a-u 239 to 672 449 to 16     also hits gene CKS1B, CKS1BP2 434/449
(96 %)
0 diff
(100 %id)
DW446531.
matches multiple genes
Liver .a-u 253 to 452 17 to 216     also hits gene CKS1B 200/216
(92 %)
6 diff
(97.3 %id)
DW467182.
matches multiple genes
Liver .a-u 253 to 583 17 to 347     also hits gene CKS1B, CKS1BP2 331/347
(95 %)
6 diff
(98.3 %id)
EH348432.
matches multiple genes
  .a-u 258 to 333 1 to 76     also hits gene CKS1B, CKS1BP2 76/76
(100 %)
0 diff
(100 %id)
W44561.
matches multiple genes
senescent fibroblast .a-u 260 to 775 527 to 5   tiling clone, also hits gene CKS1B 523/530
(98 %)
0 diff
(100 %id)
AU155591.
matches multiple genes
placenta .a-u 266 to 764 497 to 1     also hits gene CKS1B, CKS1BP2 497/498
(99 %)
13 diff
(97.4 %id)
AA129784 uterus .a-u 275 to 775 1 to 503   tiling clone,   503/503
(100 %)
23 diff
(95.5 %id)
BI256707.
matches multiple genes
cervical carcinoma cell line, cervix .a-u 275 to 764 1 to 490   tiling clone, AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base), also hits gene CKS1BP2 490/490
(100 %)
3 diff
(99.4 %id)
AI075239.
matches multiple genes
parathyroid gland, parathyroid tumor .a-u 276 to 769 494 to 1     also hits gene CKS1B, CKS1BP2 494/494
(100 %)
5 diff
(99.0 %id)
AI339996.
matches multiple genes
adenocarcinoma, colon .a-u 279 to 771 493 to 1     also hits gene CKS1BP2 493/493
(100 %)
4 diff
(99.2 %id)
AI362835.
matches multiple genes
anaplastic oligodendroglioma, brain .a-u 289 to 767 479 to 1     also hits gene CKS1B, CKS1BP2 479/479
(100 %)
3 diff
(99.4 %id)
AI146955.
matches multiple genes
senescent fibroblast .a-u 294 to 761 473 to 6     also hits gene CKS1B, CKS1BP2 468/473
(98 %)
0 diff
(100 %id)
AI989380 thymus, pooled .a-u 295 to 774 480 to 1       480/480
(100 %)
3 diff
(99.4 %id)
R92790.
matches multiple genes
liver and spleen .a-u 315 to 756 459 to 1     also hits gene CKS1B, CKS1BP2 459/459
(100 %)
22 diff
(95.3 %id)
AW589407.
matches multiple genes
uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a-u 323 to 606 282 to 1     also hits gene CKS1B, CKS1BP2 282/282
(100 %)
11 diff
(96.1 %id)
AI361128 brain, glioblastoma (pooled) .a-u 325 to 787 463 to 1   tiling clone,   463/463
(100 %)
18 diff
(96.2 %id)
BF752229.
matches multiple genes
breast_normal .a-u 326 to 632 1 to 308     also hits gene CKS1B, CKS1BP2 308/309
(99 %)
15 diff
(95.2 %id)
AA157451.
matches multiple genes
Pancreas .a-u 335 to 760 425 to 1     also hits gene CKS1B 425/425
(100 %)
4 diff
(99.1 %id)
R97424.
matches multiple genes
liver and spleen .a-u 343 to 754 427 to 1     also hits gene CKS1B, TAF9 427/427
(100 %)
21 diff
(95.1 %id)
AA459292.
matches multiple genes
ovarian tumor, ovary .a-u 347 to 764 455 to 38   AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base), also hits gene CKS1B 418/418
(100 %)
6 diff
(98.6 %id)
T99631.
matches multiple genes
liver and spleen .a-u 371 to 749 391 to 6     Submitted on the opposite strand, also hits gene CKS1B, CKS1BP2 386/391
(98 %)
0 diff
(100 %id)
R76789.
matches multiple genes
placenta .a-u 398 to 745 361 to 1     also hits gene CKS1B 361/369
(97 %)
17 diff
(95.4 %id)
CF619107.
matches multiple genes
Pooled Chondrosarcoma Tumor cells .a-u 398 to 773 9 to 384   tiling clone, also hits gene CKS1A, sherdor 376/1215
(30 %)
6 diff
(99.6 %id)
AI494211.
matches multiple genes
anaplastic oligodendroglioma, brain .a-u 401 to 760 364 to 1     also hits gene CKS1BP2 364/364
(100 %)
36 diff
(90.2 %id)
AI919512.
matches multiple genes
poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a-u 470 to 606 138 to 1     also hits gene CKS1B, CKS1BP2 138/138
(100 %)
4 diff
(97.2 %id)
T55875.
matches multiple genes
Liver .a-u 479 to 558 80 to 1     also hits gene CKS1B, CKS1BP2 80/80
(100 %)
1 diff
(98.8 %id)
EC448047.
matches multiple genes
Prostate .a-u 499 to 590 1 to 92     also hits gene CKS1B, CKS1BP2 92/92
(100 %)
2 diff
(97.9 %id)
EC464038.
matches multiple genes
Prostate .a-u 500 to 590 1 to 89     also hits gene CKS1B, CKS1BP2 89/89
(100 %)
4 diff
(95.6 %id)
H42038 breast .a-u 505 to 755 267 to 10   fully sequenced,   258/267
(96 %)
7 diff
(97.4 %id)
EC462927.
matches multiple genes
Prostate .a-u 510 to 590 17 to 97     also hits gene CKS1B, CKS1BP2 81/97
(83 %)
7 diff
(92.8 %id)
R54704.
matches multiple genes
breast .a-u 537 to 758 221 to 1   fully sequenced, also hits gene CKS1B 221/221
(100 %)
3 diff
(98.7 %id)
N91940.
matches multiple genes
lung .a-u 561 to 764 233 to 31   AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base), also hits gene CKS1BP2, PAPSS2 203/213
(95 %)
3 diff
(98.6 %id)
BY999121.
matches multiple genes
  .a-u 610 to 766 1 to 157     Submitted on the opposite strand, also hits gene CKS1B, CKS1BP2 157/157
(100 %)
3 diff
(98.1 %id)
? Gene Summary Gene on genome mRNA Expression Tissue