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Gene CIAO1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
557 supporting clones for gene CIAO1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC414535 trachea .a 1 to 499 1 to 499   tiling clone,   499/499
(100 %)
1 diff
(99.8 %id)
DC407675 thymus .a 43 to 509 1 to 467       467/467
(100 %)
1 diff
(99.8 %id)
DC401290 testis .a 62 to 390 1 to 329       329/329
(100 %)
0 diff
(100 %id)
DA058248 cerebellum .a 64 to 639 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
AW249312 lung, small cell carcinoma .a 75 to 214 10 to 149       140/149
(93 %)
6 diff
(96.0 %id)
BG724206 testis .a 81 to 710 1 to 629       629/629
(100 %)
7 diff
(98.9 %id)
BI460314 testis .a 81 to 773 1 to 694       694/694
(100 %)
11 diff
(98.5 %id)
NM_004804.2   .a 89 to 4141 1 to 4053 exact RefSeq,   4053/4053
(100 %)
0 diff
(100 %id)
BP249414 Kidney .a 98 to 681 1 to 582       582/583
(99 %)
5 diff
(99.2 %id)
BP248706 Kidney .a 100 to 682 1 to 581       581/583
(99 %)
3 diff
(99.5 %id)
DB088612 testis .a 101 to 640 2 to 544   capped   543/543
(100 %)
3 diff
(99.5 %id)
DA781392 brain .a 103 to 678 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB080514 testis .a 110 to 562 2 to 454   capped   453/459
(98 %)
1 diff
(99.8 %id)
DB091832 testis .a 110 to 646 2 to 541   capped   540/540
(100 %)
4 diff
(99.3 %id)
DA504083 brain .a 111 to 688 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
CN281591 embryonic stem cells, cell lines H1, H7, andH9 .a 117 to 647 1 to 532       532/532
(100 %)
2 diff
(99.7 %id)
AA708900 pineal gland .a 119 to 569 1 to 449     Submitted on the opposite strand 449/449
(100 %)
6 diff
(98.7 %id)
BG674322 skin .a 122 to 985 1 to 871       871/1001
(87 %)
14 diff
(98.7 %id)
BP350110 brain .a 137 to 718 1 to 583       581/583
(99 %)
3 diff
(99.5 %id)
DA347145 substantia nigra .a 138 to 683 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
U63810   .a 138 to 1520 1 to 1384 exact AAA   1384/1384
(100 %)
8 diff
(99.5 %id)
CF141854 CNCAP(3)T-225 cell line, Prostate .a 147 to 598 8 to 459       452/459
(98 %)
6 diff
(98.7 %id)
TI_154172722   .a 147 to 690 88 to 632       545/1038
(52 %)
4 diff
(99.7 %id)
DA716729   .a 160 to 617 2 to 459   capped   458/458
(100 %)
1 diff
(99.8 %id)
DA025681   .a 164 to 721 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA294216 hippocampus .a 164 to 673 2 to 511   capped   510/510
(100 %)
1 diff
(99.9 %id)
DA296504 hippocampus .a 165 to 730 2 to 569   capped   568/568
(100 %)
3 diff
(99.5 %id)
DA780763 brain .a 165 to 719 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA409875 thalamus .a 166 to 700 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DB244411 uterus, tumor tissue .a 166 to 724 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
AK223257 stomach mucosa .a 168 to 1979 1 to 1812 C243G tiling clone,   1812/1812
(100 %)
1 diff
(100.0 %id)
BP343206 stomach mucosa .a 168 to 751 1 to 584       584/584
(100 %)
0 diff
(100 %id)
DA219720 brain .a 169 to 730 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA231581 brain .a 169 to 710 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA247361 brain .a 169 to 685 2 to 518   capped   517/525
(98 %)
1 diff
(99.9 %id)
DA810855 brain .a 169 to 729 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB076583 testis .a 169 to 663 2 to 496   capped   495/495
(100 %)
0 diff
(100 %id)
BP369117 testis .a 169 to 737 1 to 569       569/569
(100 %)
1 diff
(99.9 %id)
AU105661   .a 171 to 220 1 to 50       50/50
(100 %)
1 diff
(98.0 %id)
AU105662   .a 171 to 220 1 to 50       50/50
(100 %)
0 diff
(100 %id)
BP271400 small intestine .a 171 to 752 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP347871 brain .a 171 to 757 1 to 587       587/587
(100 %)
0 diff
(100 %id)
DA123794 cerebellum .a 172 to 703 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DA188607 amygdala .a 172 to 561 2 to 391   capped   390/390
(100 %)
1 diff
(99.8 %id)
DA315046 hippocampus .a 172 to 737 2 to 573   capped   572/572
(100 %)
7 diff
(98.8 %id)
DA462161 tongue, tumor tissue .a 172 to 749 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA495695 brain .a 172 to 739 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA501973 brain .a 172 to 737 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA827618 pericardium .a 172 to 728 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB063603 testis .a 172 to 707 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
BQ925050 large cell carcinoma, lung .a 176 to 573 1 to 398       398/443
(89 %)
1 diff
(99.8 %id)
BX403655 placenta .a 178 to 1244 1 to 1047       1047/1069
(97 %)
19 diff
(98.3 %id)
BX445997 placenta .a 178 to 985 1 to 807       807/807
(100 %)
7 diff
(99.2 %id)
BF977803 melanotic melanoma, high MDR, skin .a 178 to 700 1 to 530       530/745
(71 %)
27 diff
(96.4 %id)
BF978468 melanotic melanoma, high MDR, skin .a 178 to 856 1 to 680       680/685
(99 %)
9 diff
(98.7 %id)
BG698633 skin .a 178 to 903 25 to 750       726/750
(96 %)
19 diff
(97.5 %id)
DB288493 uterus .a 178 to 739 2 to 566   capped   565/565
(100 %)
4 diff
(99.3 %id)
AK315568 placenta .a 180 to 1313 1 to 1134 Y170C     1134/1134
(100 %)
1 diff
(100.0 %id)
BU598618 mixed (pool of 40 RNAs) .a 180 to 964 1 to 789       789/791
(99 %)
14 diff
(98.3 %id)
BP287663 lung .a 180 to 760 1 to 581       581/583
(99 %)
3 diff
(99.5 %id)
AU105664   .a 180 to 229 1 to 50       50/50
(100 %)
0 diff
(100 %id)
DA076050 cerebellum .a 181 to 713 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DA164478 amygdala .a 181 to 703 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
DA174460 amygdala .a 181 to 624 2 to 445   capped   444/444
(100 %)
0 diff
(100 %id)
DA181617 amygdala .a 181 to 732 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA187547 amygdala .a 181 to 718 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA190240 amygdala .a 181 to 776 2 to 597   capped   596/596
(100 %)
1 diff
(99.9 %id)
DA235626 brain .a 181 to 758 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA346019 substantia nigra .a 181 to 762 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DA382450 thalamus .a 181 to 742 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA384420 thalamus .a 181 to 797 2 to 618   capped   617/617
(100 %)
1 diff
(99.9 %id)
DA410354 thalamus .a 181 to 746 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA410421 thalamus .a 181 to 744 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA506239 brain .a 181 to 738 8 to 565   capped   558/558
(100 %)
0 diff
(100 %id)
DA649625   .a 181 to 730 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA718740   .a 181 to 693 2 to 514   capped   513/513
(100 %)
0 diff
(100 %id)
DA797118 brain .a 181 to 739 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA807874 brain .a 181 to 770 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA854566 placenta .a 181 to 748 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA919408 small intestine .a 181 to 529 2 to 351   capped   350/350
(100 %)
1 diff
(99.8 %id)
BP381025   .a 181 to 781 1 to 599       599/750
(79 %)
6 diff
(99.2 %id)
DA576258   .a 182 to 726 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
BP280878   .a 182 to 763 1 to 584       584/585
(99 %)
16 diff
(97.3 %id)
DA755831   .a 182 to 767 2 to 588   capped   587/587
(100 %)
2 diff
(99.7 %id)
DA995830 synovial membrane tissue from rheumatioidarthritis .a 182 to 730 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
CB151837 cervix, Uterine .a 183 to 769 1 to 587       587/587
(100 %)
0 diff
(100 %id)
CB151289 cervix, Uterine .a 183 to 648 1 to 466       466/466
(100 %)
1 diff
(99.8 %id)
AU105663   .a 183 to 232 1 to 50       50/50
(100 %)
1 diff
(98.0 %id)
BP262764 small intestine .a 183 to 762 1 to 580       580/582
(99 %)
3 diff
(99.5 %id)
BE394721 endometrium, adenocarcinoma cell line, uterus .a 183 to 833 1 to 656       656/658
(99 %)
9 diff
(98.7 %id)
DA821671 pericardium .a 183 to 746 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BP340134 Spleen .a 183 to 748 1 to 566       566/566
(100 %)
3 diff
(99.5 %id)
DB140884 thymus .a 183 to 703 2 to 523   capped   522/522
(100 %)
2 diff
(99.7 %id)
DA033606   .a 184 to 756 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA039988 bladder .a 184 to 506 2 to 325   capped   324/324
(100 %)
2 diff
(99.4 %id)
DA128718 cerebellum .a 184 to 762 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA176504 amygdala .a 184 to 743 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA192258 amygdala .a 184 to 654 2 to 474   capped   473/473
(100 %)
2 diff
(99.6 %id)
DA201055 brain .a 184 to 733 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA247617 brain .a 184 to 773 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA319467 hippocampus .a 184 to 726 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA451744 tongue, tumor tissue .a 184 to 760 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA451965 tongue, tumor tissue .a 184 to 760 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA514390 brain .a 184 to 713 2 to 532   capped   531/531
(100 %)
1 diff
(99.9 %id)
DA576549   .a 184 to 744 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA608926   .a 184 to 735 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA694656   .a 184 to 745 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA736648   .a 184 to 1000 2 to 813   capped   812/818
(99 %)
6 diff
(99.3 %id)
DA740183   .a 184 to 664 2 to 483   capped   482/482
(100 %)
1 diff
(99.8 %id)
DA766984 tongue .a 184 to 730 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA792289 brain .a 184 to 746 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DA926308 small intestine .a 184 to 747 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB014725 esophageal, tumor tissue .a 184 to 701 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DB289610 uterus .a 184 to 735 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
AU105665   .a 184 to 233 1 to 50       50/50
(100 %)
0 diff
(100 %id)
BG705513 brain, hippocampus .a 185 to 934 24 to 773       750/790
(94 %)
25 diff
(96.9 %id)
BP383517   .a 185 to 684 1 to 499       500/499
(100 %)
7 diff
(98.6 %id)
DB496039 hypothalamus .a 186 to 667 1 to 482       482/482
(100 %)
1 diff
(99.8 %id)
AI878834 brain, frontal lobe .a 186 to 697 1 to 512       512/516
(99 %)
6 diff
(98.9 %id)
BF685953 leiomyosarcoma cell line, uterus .a 186 to 853 1 to 668       668/668
(100 %)
3 diff
(99.6 %id)
BG340198 leiomyosarcoma cell line, uterus .a 186 to 924 1 to 739       739/995
(74 %)
16 diff
(98.4 %id)
DB211564 trachea .a 186 to 668 2 to 484   capped   483/488
(98 %)
1 diff
(99.8 %id)
BP300284   .a 187 to 766 1 to 579       579/579
(100 %)
11 diff
(98.2 %id)
BM748763 stomach .a 187 to 748 1 to 561       561/561
(100 %)
5 diff
(99.2 %id)
DB259967 uterus .a 188 to 735 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
BG478028 melanotic melanoma, skin .a 189 to 581 1 to 397       397/638
(62 %)
9 diff
(98.6 %id)
BI257432 cervical carcinoma cell line, cervix .a 189 to 990 4 to 804       801/829
(96 %)
19 diff
(97.8 %id)
BM809094 amelanotic melanoma, cell line, skin .a 189 to 1207 18 to 1041       1024/1125
(91 %)
25 diff
(97.8 %id)
BM799458 eye, retinoblastoma .a 189 to 782 18 to 611       594/1069
(55 %)
12 diff
(98.9 %id)
TI_57221609   .a 189 to 985 59 to 856       798/1060
(75 %)
9 diff
(99.2 %id)
TI_57237796   .a 189 to 1047 26 to 894       869/994
(87 %)
28 diff
(97.2 %id)
TI_57148488   .a 190 to 844 56 to 722       667/724
(92 %)
23 diff
(96.9 %id)
CB140249 Liver .a 191 to 667 1 to 477       477/477
(100 %)
3 diff
(99.4 %id)
DA796784 brain .a 191 to 666 2 to 480   capped   479/479
(100 %)
3 diff
(99.4 %id)
ES315155 occipital scalp hair, skin .a 192 to 354 1 to 163       163/163
(100 %)
3 diff
(98.2 %id)
CN281586 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 193 to 666 1 to 474       474/474
(100 %)
3 diff
(99.4 %id)
BI907446 leukocyte .a 193 to 393 1 to 203       203/203
(100 %)
2 diff
(99.1 %id)
BM912470 amelanotic melanoma, cell line, skin .a 193 to 887 11 to 709       699/1085
(64 %)
20 diff
(98.2 %id)
TI_57232430   .a 193 to 989 34 to 827       794/827
(96 %)
19 diff
(97.8 %id)
BI759804 pooled colon, kidney, stomach .a 194 to 393 1 to 200       200/200
(100 %)
0 diff
(100 %id)
DA794708 brain .a 194 to 735 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
BC032812 Blood, adult leukocytes .a 195 to 1520 1 to 1326 exact tiling clone, available from MGC, AAA   1326/1326
(100 %)
0 diff
(100 %id)
DA240236 brain .a 195 to 776 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
EF011618   .a 195 to 1520 1 to 1326 exact AAA   1326/1326
(100 %)
0 diff
(100 %id)
BI757061 brain .a 195 to 393 1 to 199       199/199
(100 %)
0 diff
(100 %id)
BI909524 leukocyte .a 195 to 393 1 to 199       199/199
(100 %)
0 diff
(100 %id)
CX788003 human embryonic stem cells .a 195 to 1077 1 to 883       883/883
(100 %)
0 diff
(100 %id)
CX788005 human embryonic stem cells .a 195 to 1028 1 to 833       833/833
(100 %)
1 diff
(99.9 %id)
CX163013 human embryonic stem cells differentiated toan early endodermal cell type .a 195 to 1045 1 to 851       851/851
(100 %)
0 diff
(100 %id)
CR998988 T-Lymphocytes .a 195 to 882 1 to 688       688/692
(99 %)
1 diff
(99.9 %id)
DB079973 testis .a 195 to 756 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB098220 testis .a 195 to 794 2 to 601   capped   600/600
(100 %)
0 diff
(100 %id)
BM799740 eye, retinoblastoma .a 196 to 1110 1 to 916       916/1076
(85 %)
6 diff
(99.5 %id)
BU182350 eye, retinoblastoma .a 196 to 990 1 to 798       798/892
(89 %)
8 diff
(99.2 %id)
BU845995 ovary, teratocarcinoma, cell line .a 196 to 1067 38 to 911       872/978
(89 %)
13 diff
(98.7 %id)
BQ277767 ovary, teratocarcinoma, cell line .a 197 to 939 1 to 750       750/1096
(68 %)
17 diff
(98.5 %id)
BG024903 lymph, lymphoma, cell line .a 198 to 988 1 to 798       798/813
(98 %)
42 diff
(94.9 %id)
BF103866 embryonal carcinoma, testis .a 199 to 808 1 to 610       610/610
(100 %)
2 diff
(99.7 %id)
BM469447 lymph, lymphoma, cell line .a 199 to 660 1 to 464       464/1111
(41 %)
9 diff
(99.2 %id)
DA215922 brain .a 200 to 664 2 to 466   capped   465/465
(100 %)
1 diff
(99.8 %id)
CN281587 embryonic stem cells, cell lines H1, H7, andH9 .a 200 to 814 1 to 615       615/615
(100 %)
1 diff
(99.9 %id)
CN281588 embryonic stem cells, cell lines H1, H7, andH9 .a 200 to 339 1 to 140       140/140
(100 %)
2 diff
(98.6 %id)
CR976766 T-Lymphocytes .a 200 to 810 1 to 612       612/612
(100 %)
2 diff
(99.7 %id)
BG436913 large cell carcinoma, lung .a 201 to 690 1 to 495       493/885
(55 %)
16 diff
(98.2 %id)
BG489395 large cell carcinoma, lung .a 201 to 877 1 to 696       618/1066
(57 %)
22 diff
(98.0 %id)
BM476456 lymph, lymphoma, cell line .a 202 to 1073 1 to 873       871/1034
(84 %)
13 diff
(98.8 %id)
BG437546 large cell carcinoma, lung .a 203 to 805 1 to 605       538/609
(88 %)
15 diff
(97.6 %id)
CA489391   .a 203 to 990 1 to 796       796/816
(97 %)
15 diff
(98.2 %id)
CX763081 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 203 to 905 1 to 695     Submitted on the opposite strand 695/849
(81 %)
15 diff
(98.3 %id)
DA855239 placenta .a 203 to 804 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
BI833365 pooled pancreas and spleen .a 204 to 393 1 to 190       190/190
(100 %)
0 diff
(100 %id)
BU188634 melanotic melanoma, cell line, skin .a 204 to 990 1 to 790       790/919
(85 %)
13 diff
(98.6 %id)
BU509382 leiomyosarcoma, uterus .a 204 to 995 1 to 799       799/952
(83 %)
26 diff
(97.3 %id)
DA223789 brain .a 205 to 780 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
BQ926291 large cell carcinoma, lung .a 205 to 885 1 to 688       688/941
(73 %)
13 diff
(98.7 %id)
DB155687 thymus .a 207 to 802 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DB235986 trachea .a 207 to 663 2 to 458   capped   457/457
(100 %)
0 diff
(100 %id)
BE730587 melanotic melanoma, skin .a 208 to 854 17 to 658       642/658
(97 %)
10 diff
(98.5 %id)
BG748297 eye, normal pigmented retinal epithelium .a 209 to 727 1 to 523       523/781
(66 %)
9 diff
(98.9 %id)
BX456522 thymus .a 210 to 1158 1 to 944       944/953
(99 %)
9 diff
(99.1 %id)
BE542197 cervix .a 211 to 926 1 to 725       725/736
(98 %)
23 diff
(96.9 %id)
CR605216 T cells (Jurkat cell line) Cot10-normalized .a 212 to 1495 1 to 1284 exact     1284/1284
(100 %)
0 diff
(100 %id)
DA771863 brain .a 212 to 784 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
AL559210 T cells from T cell leukemia .a 213 to 777 3 to 567   fully sequenced,   565/567
(99 %)
6 diff
(99.0 %id)
BP248934 Kidney .a 213 to 789 1 to 577       577/593
(97 %)
10 diff
(98.4 %id)
CA488800   .a 213 to 743 77 to 611       535/1392
(38 %)
18 diff
(98.8 %id)
DA323619 hippocampus .a 214 to 730 2 to 518   capped   517/517
(100 %)
1 diff
(99.9 %id)
BF027404 melanotic melanoma, skin .a 214 to 1064 28 to 864       837/1038
(80 %)
34 diff
(96.8 %id)
DA907377   .a 214 to 781 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BI549283 brain, hippocampus .a 215 to 949 1 to 738       738/912
(80 %)
16 diff
(98.3 %id)
N40426 melanocyte .a 216 to 660 1 to 453       453/517
(87 %)
15 diff
(97.1 %id)
BP299612   .a 216 to 795 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
CN281590 embryonic stem cells, cell lines H1, H7, andH9 .a 217 to 850 12 to 645       634/645
(98 %)
6 diff
(99.1 %id)
CR742201 melanocyte .a 217 to 649 1 to 433       433/434
(99 %)
1 diff
(99.8 %id)
CA391388 eye, RPE/choroid .a 217 to 652 1 to 437       437/437
(100 %)
1 diff
(99.8 %id)
BF027159 melanotic melanoma, skin .a 217 to 985 26 to 786       761/970
(78 %)
26 diff
(97.4 %id)
BM451454 eye, retinoblastoma .a 217 to 578 1 to 365       365/886
(41 %)
9 diff
(99.0 %id)
BM800766 melanotic melanoma, skin .a 217 to 767 16 to 566       551/1182
(46 %)
15 diff
(98.8 %id)
BM906666 ovary (pool of 3) .a 217 to 1071 3 to 863       861/1137
(75 %)
32 diff
(97.2 %id)
TI_44167413   .a 217 to 949 85 to 820   AAA   736/969
(75 %)
18 diff
(98.2 %id)
BF027460 melanotic melanoma, skin .a 218 to 943 27 to 751       725/993
(73 %)
30 diff
(97.0 %id)
BE294684 muscle, rhabdomyosarcoma .a 219 to 746 1 to 527       527/527
(100 %)
1 diff
(99.9 %id)
CR987801 T-Lymphocytes .a 219 to 882 1 to 665       665/666
(99 %)
2 diff
(99.7 %id)
CR998397 T-Lymphocytes .a 219 to 888 1 to 672       672/672
(100 %)
6 diff
(99.2 %id)
DA127099 cerebellum .a 220 to 735 2 to 517   capped   516/516
(100 %)
0 diff
(100 %id)
BE539103 cervix .a 220 to 894 1 to 708       545/970
(56 %)
30 diff
(97.0 %id)
DA995732 synovial membrane tissue from rheumatioidarthritis .a 220 to 762 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
BP370248 testis .a 220 to 782 1 to 564       564/566
(99 %)
11 diff
(98.1 %id)
DA104950 cerebellum .a 221 to 561 2 to 344   capped   343/343
(100 %)
2 diff
(99.5 %id)
DA208729 brain .a 221 to 779 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA323141 hippocampus .a 221 to 784 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA389008 thalamus .a 221 to 810 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA406784 thalamus .a 221 to 788 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA492939 brain .a 221 to 762 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
BE747500 adenocarcinoma cell line, ovary .a 221 to 976 34 to 779   AAA   746/1007
(74 %)
24 diff
(97.7 %id)
DA683335   .a 221 to 723 2 to 504   capped   503/503
(100 %)
0 diff
(100 %id)
DA715445   .a 221 to 703 2 to 484   capped   483/483
(100 %)
0 diff
(100 %id)
DA740314   .a 221 to 668 2 to 449   capped   448/453
(98 %)
1 diff
(99.8 %id)
DA849963 placenta .a 221 to 779 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
CR975415 T-Lymphocytes .a 221 to 879 1 to 659       659/660
(99 %)
1 diff
(99.9 %id)
DA925059 small intestine .a 221 to 797 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA944759 Spleen .a 221 to 531 2 to 312   capped   311/311
(100 %)
0 diff
(100 %id)
DA950538 Spleen .a 221 to 788 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DB217832 trachea .a 221 to 718 2 to 500   capped   499/500
(99 %)
2 diff
(99.6 %id)
AA284225 germinal center B cell .a 222 to 504 1 to 283       283/283
(100 %)
2 diff
(99.3 %id)
CN281589 embryonic stem cells, cell lines H1, H7, andH9 .a 224 to 861 1 to 639       639/639
(100 %)
5 diff
(99.3 %id)
BG334289 melanotic melanoma, skin .a 224 to 789 1 to 563       529/802
(65 %)
14 diff
(98.3 %id)
BG478618 melanotic melanoma, skin .a 224 to 940 1 to 721       721/916
(78 %)
19 diff
(98.0 %id)
BP286711 lung .a 224 to 803 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BC001395 Skin, melanotic melanoma. .a 225 to 1520 1 to 1296 exact available from MGC, AAA   1296/1296
(100 %)
0 diff
(100 %id)
BE386980 melanotic melanoma, skin .a 227 to 884 1 to 657       657/657
(100 %)
9 diff
(98.7 %id)
CB140869 Liver .a 231 to 854 1 to 625       625/625
(100 %)
1 diff
(99.9 %id)
DA298084 hippocampus .a 234 to 815 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DA664621   .a 234 to 786 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA755793   .a 234 to 806 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
CN281584 embryonic stem cells, cell lines H1, H7, andH9 .a 237 to 881 1 to 643       643/643
(100 %)
2 diff
(99.7 %id)
BG179197 adenocarcinoma, cell line, Prostate .a 237 to 833 1 to 608       531/1023
(51 %)
23 diff
(97.8 %id)
BG743967 blood, natural killer cells, cell line .a 237 to 813 1 to 577   fully sequenced,   577/577
(100 %)
1 diff
(99.9 %id)
BQ423064 melanotic melanoma, skin .a 237 to 774 24 to 566       543/1142
(47 %)
18 diff
(98.5 %id)
CN281593 embryonic stem cells, cell lines H1, H7, andH9 .a 239 to 446 1 to 208       208/208
(100 %)
0 diff
(100 %id)
DA816027   .a 240 to 800 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
CR742473 Prostate .a 241 to 613 1 to 373       373/373
(100 %)
0 diff
(100 %id)
BE386565 melanotic melanoma, skin .a 243 to 644 1 to 428       368/429
(85 %)
22 diff
(94.9 %id)
DA531784 brain .a 244 to 848 2 to 606   capped   605/605
(100 %)
0 diff
(100 %id)
BE276476 melanotic melanoma, skin .a 244 to 935 1 to 695       695/700
(99 %)
20 diff
(97.2 %id)
DB283765 uterus .a 244 to 788 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
BG034334 breast, mammary adenocarcinoma, cell line .a 247 to 913 1 to 667       667/1150
(58 %)
12 diff
(99.0 %id)
AL119725 amygdala .a 251 to 671 1 to 421       421/421
(100 %)
1 diff
(99.8 %id)
BM551213 duodenal adenocarcinoma, cell line, small intestine .a 256 to 1034 1 to 782       782/817
(95 %)
7 diff
(99.2 %id)
DB095348 testis .a 258 to 819 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BE891887 melanotic melanoma, skin .a 261 to 966 1 to 702       702/824
(85 %)
14 diff
(98.4 %id)
DA722978   .a 272 to 843 2 to 574   capped   573/573
(100 %)
3 diff
(99.5 %id)
DN995905 breast cancer, Mammary gland (cancer tissue) .a 275 to 829 1 to 555       555/555
(100 %)
5 diff
(99.1 %id)
CR592447 Placenta Cot 25-normalized .a 277 to 1486 1 to 1210 exact     1210/1210
(100 %)
0 diff
(100 %id)
AL551411 placenta, Placenta Cot 25-normalized .a 277 to 936 1 to 659   fully sequenced,   659/659
(100 %)
4 diff
(99.4 %id)
BQ671258 epidermoid carcinoma, cell line, salivary gland .a 279 to 990 1 to 708       708/886
(79 %)
25 diff
(97.2 %id)
DA608142   .a 280 to 843 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA632018 Kidney .a 284 to 812 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
BQ220669 melanotic melanoma, skin .a 285 to 945 12 to 677       666/935
(71 %)
19 diff
(98.0 %id)
DA158701 amygdala .a 292 to 778 2 to 488   capped   487/487
(100 %)
0 diff
(100 %id)
DA606774   .a 292 to 762 2 to 472   capped   471/471
(100 %)
0 diff
(100 %id)
TI_1948122049   .a 293 to 753 130 to 590   fully sequenced,   461/590
(78 %)
6 diff
(99.0 %id)
TI_1948122218   .a 293 to 813 129 to 651   fully sequenced,   523/651
(80 %)
6 diff
(99.1 %id)
TI_1948122399   .a 293 to 813 133 to 653   fully sequenced,   521/653
(79 %)
6 diff
(99.1 %id)
TI_1948122569   .a 293 to 813 128 to 648   fully sequenced,   521/648
(80 %)
6 diff
(99.1 %id)
CR456802   .a 294 to 1309 1 to 1016       1016/1020
(99 %)
3 diff
(99.8 %id)
CV028278 mixed .a 294 to 789 1 to 496       496/504
(98 %)
20 diff
(96.1 %id)
BG763456 melanotic melanoma, high MDR (cell line), skin .a 297 to 1176 1 to 893       814/897
(90 %)
27 diff
(97.0 %id)
DT219968 brain .a 302 to 815 1 to 514       514/514
(100 %)
1 diff
(99.9 %id)
BG029724 breast, mammary adenocarcinoma, cell line .a 303 to 985 1 to 683       683/954
(71 %)
8 diff
(99.2 %id)
BQ212508 melanotic melanoma, skin .a 321 to 1193 1 to 884       884/891
(99 %)
24 diff
(97.4 %id)
DW427344 Liver .a 376 to 645 10 to 279       270/279
(96 %)
6 diff
(97.9 %id)
DA216830 brain .a 393 to 930 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
CV334499 uterus_tumor .a 424 to 1109 1 to 686       686/686
(100 %)
4 diff
(99.5 %id)
R72718 breast .a 441 to 891 1 to 454       454/454
(100 %)
7 diff
(98.5 %id)
AA304604 aorta .a 463 to 705 1 to 243       243/243
(100 %)
0 diff
(100 %id)
CR593125 B cells (Ramos cell line) Cot 25-normalized .a 470 to 1518 1 to 1049       1049/1049
(100 %)
0 diff
(100 %id)
BX401933   .a 470 to 1470 1 to 987       987/993
(99 %)
23 diff
(97.7 %id)
BP214603 corpus callosum .a 533 to 1123 1 to 593       593/593
(100 %)
3 diff
(99.5 %id)
BM755719 Ascites, stomach .a 543 to 994 1 to 452       452/452
(100 %)
1 diff
(99.8 %id)
BQ339250 nervous_normal .a 545 to 970 443 to 18       426/464
(91 %)
0 diff
(100 %id)
BG251014 adenocarcinoma, cell line, Liver .a 555 to 1306 1 to 744       744/974
(76 %)
11 diff
(98.9 %id)
BG533301 Liver .a 557 to 1346 1 to 783       783/785
(99 %)
10 diff
(98.8 %id)
TI_57190234   .a 559 to 1348 53 to 838       786/787
(99 %)
5 diff
(99.4 %id)
BI856828 breast, mammary adenocarcinoma, cell line .a 560 to 1348 1 to 785       785/786
(99 %)
5 diff
(99.4 %id)
BG120288 adenocarcinoma, cell line, Liver .a 561 to 1231 1 to 665       665/892
(74 %)
8 diff
(99.2 %id)
BG491627 amelanotic melanoma, cell line, skin .a 564 to 1345 1 to 826       826/826
(100 %)
47 diff
(94.4 %id)
DA712708   .a 586 to 1146 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
EH348441   .a 603 to 676 1 to 74       74/74
(100 %)
0 diff
(100 %id)
BM479349 eye, retinoblastoma .a 604 to 1576 1 to 986       986/1051
(93 %)
19 diff
(98.2 %id)
BE813035 amnion_normal .a 619 to 936 324 to 11       314/324
(96 %)
0 diff
(100 %id)
AW890243 nervous_tumor .a 655 to 977 327 to 5       323/328
(98 %)
2 diff
(99.4 %id)
CR740175 liver and spleen .a 690 to 1292 20 to 629       610/629
(96 %)
4 diff
(99.4 %id)
TI_1948122050   .a 723 to 1318 716 to 121   fully sequenced,   596/716
(83 %)
0 diff
(100 %id)
AL580873 T cells from T cell leukemia .a 747 to 1495 752 to 1   fully sequenced,   752/752
(100 %)
11 diff
(98.6 %id)
TI_1948122219   .a 752 to 1318 701 to 133   fully sequenced,   569/701
(81 %)
0 diff
(100 %id)
TI_1948122400   .a 752 to 1318 685 to 119   fully sequenced,   567/685
(82 %)
0 diff
(100 %id)
TI_1948122570   .a 752 to 1318 685 to 119   fully sequenced,   567/685
(82 %)
0 diff
(100 %id)
TI_44460016   .a 757 to 1527 54 to 831       778/1009
(77 %)
8 diff
(99.3 %id)
BI518418 leukocyte .a 758 to 1527 1 to 771       771/800
(96 %)
5 diff
(99.4 %id)
BI519859 leukocyte .a 758 to 1445 692 to 1       692/692
(100 %)
4 diff
(99.5 %id)
TI_44460018   .a 758 to 1445 692 to 1       692/946
(73 %)
4 diff
(99.6 %id)
BM014034 breast, mammary adenocarcinoma, cell line .a 761 to 1521 11 to 772       762/786
(96 %)
8 diff
(99.0 %id)
TI_59391987   .a 761 to 1521 69 to 830       762/865
(88 %)
8 diff
(99.1 %id)
BG744646 blood, natural killer cells, cell line .a 768 to 1470 704 to 2   fully sequenced,   703/704
(99 %)
0 diff
(100 %id)
BI869718 adenocarcinoma, cell line, Liver .a 772 to 1273 1 to 535       535/535
(100 %)
31 diff
(94.3 %id)
TI_149302133   .a 784 to 1520 830 to 95   AAA   736/990
(74 %)
3 diff
(99.7 %id)
DB123368 thymus .a 792 to 1330 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
TI_57191973   .a 799 to 1448 32 to 701       670/906
(73 %)
34 diff
(96.3 %id)
BI862629 breast, mammary adenocarcinoma, cell line .a 800 to 1448 1 to 669       669/905
(73 %)
34 diff
(96.3 %id)
CV570407 cornea, eye .a 803 to 1413 1 to 611       611/611
(100 %)
0 diff
(100 %id)
BE856357 brain, glioblastoma (pooled) .a 810 to 1514 706 to 1       706/706
(100 %)
5 diff
(99.3 %id)
BF313490 brain, neuroblastoma .a 811 to 1519 54 to 755       702/771
(91 %)
25 diff
(96.8 %id)
AI952142 lung, two pooled squamous cell carcinomas .a 813 to 1519 708 to 3       706/708
(99 %)
18 diff
(97.5 %id)
TI_149292734   .a 814 to 1520 784 to 79   AAA   706/706
(100 %)
1 diff
(99.9 %id)
BQ068769 brain, neuroblastoma, cell line .a 815 to 1520 22 to 727   AAA   706/727
(97 %)
6 diff
(99.2 %id)
BQ894669 brain, neuroblastoma, cell line .a 821 to 1521 1 to 701       701/701
(100 %)
0 diff
(100 %id)
AI650960 pooled germ cell tumors .a 825 to 1603 774 to 1       774/774
(100 %)
16 diff
(98.0 %id)
BU534013 mixed (pool of 40 RNAs) .a 825 to 1519 1 to 696       696/705
(98 %)
7 diff
(99.1 %id)
BG171074 hypernephroma, cell line, Kidney .a 834 to 1623 14 to 788       775/916
(84 %)
28 diff
(97.0 %id)
BM974799 lung .a 835 to 1520 703 to 19   AAA   685/685
(100 %)
1 diff
(99.9 %id)
AW009927 colon .a 842 to 1521 686 to 8       679/686
(98 %)
6 diff
(99.2 %id)
BF057095 pooled germ cell tumors .a 848 to 1519 672 to 1       672/672
(100 %)
3 diff
(99.6 %id)
BM980389 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 855 to 1520 684 to 19   AAA   666/666
(100 %)
0 diff
(100 %id)
AI955191 brain, four pooled pituitary adenomas .a 863 to 1520 658 to 1       658/660
(99 %)
2 diff
(99.7 %id)
CA309098 Alveolar Macrophage, lung .a 865 to 1520 672 to 17   AAA   656/656
(100 %)
0 diff
(100 %id)
AW005688 anaplastic oligodendroglioma, brain .a 873 to 1519 648 to 2       647/648
(99 %)
1 diff
(99.9 %id)
BG121603 adenocarcinoma, cell line, Liver .a 879 to 1492 1 to 613       613/613
(100 %)
4 diff
(99.4 %id)
AL574986 placenta, Placenta Cot 25-normalized .a 906 to 1486 579 to 1   fully sequenced,   579/579
(100 %)
3 diff
(99.5 %id)
EH343843   .a 915 to 977 1 to 63       63/63
(100 %)
0 diff
(100 %id)
DA084402 cerebellum .a 947 to 1475 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
H83336 melanocyte .a 954 to 1379 1 to 433       433/435
(99 %)
12 diff
(97.3 %id)
BQ018347 lung, Metastatic Chondrosarcoma .a 957 to 1519 580 to 20   AAA   561/561
(100 %)
4 diff
(99.3 %id)
BM703699 eye, human retina .a 973 to 1509 1 to 537       537/537
(100 %)
1 diff
(99.9 %id)
AW248894 lung, small cell carcinoma .a 974 to 1520 557 to 11   AAA   547/547
(100 %)
2 diff
(99.7 %id)
TI_151703538   .a 983 to 1521 648 to 106       543/1263
(42 %)
7 diff
(99.5 %id)
BU935233 mixed (pool of 40 RNAs) .a 997 to 1516 1 to 529       529/901
(58 %)
21 diff
(97.7 %id)
BF742200 breast .a 998 to 1397 12 to 410       399/410
(97 %)
8 diff
(98.1 %id)
AA854927 parathyroid gland, parathyroid tumor .a 1002 to 1521 527 to 9       519/527
(98 %)
0 diff
(100 %id)
AW770702 carcinoid, lung .a 1008 to 1604 597 to 1       597/597
(100 %)
4 diff
(99.4 %id)
DA568572 whole embryo, mainly head .a 1024 to 1772 2 to 750   capped   749/751
(99 %)
10 diff
(98.7 %id)
DA812406 ovary, tumor tissue .a 1032 to 1730 2 to 701   capped   700/700
(100 %)
1 diff
(99.9 %id)
BF876482 lung_tumor .a 1036 to 1477 453 to 12     Submitted on the opposite strand 442/453
(97 %)
0 diff
(100 %id)
AI090802 heart .a 1037 to 1518 482 to 1       482/482
(100 %)
2 diff
(99.6 %id)
BE160226 head_neck .a 1046 to 1610 14 to 578       565/578
(97 %)
7 diff
(98.8 %id)
DB567048 hypothalamus .a 1050 to 1518 1 to 469     Submitted on the opposite strand 469/471
(99 %)
2 diff
(99.6 %id)
AI955028 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 1050 to 1517 512 to 40       473/512
(92 %)
1 diff
(99.9 %id)
CB137336 Liver .a 1053 to 1491 1 to 439       439/439
(100 %)
1 diff
(99.8 %id)
AI762084 colon, colon tumor, RER+ .a 1058 to 1519 464 to 3       462/464
(99 %)
0 diff
(100 %id)
AW662681 colon, moderately-differentiated adenocarcinoma .a 1067 to 1521 445 to 2       444/488
(90 %)
0 diff
(100 %id)
N26062 melanocyte .a 1077 to 1604 530 to 1       530/531
(99 %)
4 diff
(99.3 %id)
AI088023 pooled .a 1079 to 1520 454 to 13   AAA   442/442
(100 %)
2 diff
(99.6 %id)
T80987 liver and spleen .a 1085 to 1518 447 to 1       447/452
(98 %)
4 diff
(99.2 %id)
H98499 melanocyte .a 1085 to 1519 449 to 5     Submitted on the opposite strand 445/451
(98 %)
0 diff
(100 %id)
AI304851 carcinoid, lung .a 1089 to 1604 527 to 12   AAA   516/516
(100 %)
3 diff
(99.5 %id)
AI738905 colon, colon tumor, RER+ .a 1107 to 1517 442 to 31       412/442
(93 %)
0 diff
(100 %id)
CN281592 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1115 to 1781 11 to 677       667/677
(98 %)
11 diff
(98.4 %id)
BM709794 eye, Retina Foveal and Macular .a 1116 to 1520 1 to 405   AAA   405/405
(100 %)
0 diff
(100 %id)
AA283824 germinal center B cell .a 1120 to 1520 417 to 17   AAA   401/401
(100 %)
6 diff
(98.6 %id)
AI349494 lung .a 1130 to 1519 402 to 13   AAA   390/390
(100 %)
0 diff
(100 %id)
AA853964   .a 1138 to 1519 387 to 6       382/387
(98 %)
0 diff
(100 %id)
AI659696 Prostate .a 1142 to 1607 466 to 1       466/466
(100 %)
0 diff
(100 %id)
CX762663 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 1142 to 1737 1 to 594     Submitted on the opposite strand 594/718
(82 %)
23 diff
(96.8 %id)
BY999408   .a 1149 to 1521 1 to 374     Submitted on the opposite strand 374/376
(99 %)
12 diff
(96.9 %id)
BF514704   .a 1151 to 1606 471 to 16   AAA   456/456
(100 %)
1 diff
(99.8 %id)
BG394843 eye, retinoblastoma .a 1154 to 1563 1 to 414       414/793
(52 %)
11 diff
(98.7 %id)
AA618087 lung, lung tumor .a 1160 to 1604 444 to 1       444/444
(100 %)
6 diff
(98.7 %id)
AI262241 Kidney .a 1168 to 1519 352 to 2       351/352
(99 %)
0 diff
(100 %id)
BE018718 cervix .a 1173 to 1631 1 to 459       459/459
(100 %)
1 diff
(99.8 %id)
BG959608 colon .a 1200 to 1663 461 to 1       461/461
(100 %)
11 diff
(97.7 %id)
AI942345 Kidney .a 1206 to 1524 324 to 6       319/324
(98 %)
0 diff
(100 %id)
BX328348   .a 1214 to 1519 1 to 303       303/303
(100 %)
2 diff
(99.4 %id)
AA767839 germinal center B cell .a 1218 to 1520 316 to 15   AAA   302/302
(100 %)
1 diff
(99.7 %id)
AA627293 colon, colon tumor RER+ .a 1228 to 1519 292 to 1       292/292
(100 %)
2 diff
(99.4 %id)
AV706071 adrenal gland .a 1243 to 1523 1 to 281   AAA   281/281
(100 %)
0 diff
(100 %id)
AI283073 placenta .a 1254 to 1677 427 to 4       424/427
(99 %)
0 diff
(100 %id)
BE702432 nervous_normal .a 1281 to 1668 402 to 15       388/425
(91 %)
0 diff
(100 %id)
DB560211 hypothalamus .a 1285 to 1518 30 to 265     Submitted on the opposite strand 236/267
(88 %)
10 diff
(96.3 %id)
AI590833 normal gingiva (cell line from immortalizedkeratinocytes) .a 1288 to 1603 338 to 24   AAA   315/315
(100 %)
9 diff
(97.2 %id)
BE549149 cervical carcinoma cell line, cervix .a 1300 to 1997 1 to 684       684/948
(72 %)
25 diff
(97.4 %id)
EC567336 Prostate .a 1325 to 1434 1 to 106       106/106
(100 %)
6 diff
(94.4 %id)
CX162953 human embryonic stem cells differentiated toan early endodermal cell type .a 1325 to 1524 226 to 27   AAA   200/200
(100 %)
10 diff
(95.0 %id)
BX479733   .a 1327 to 1921 1 to 595       595/595
(100 %)
2 diff
(99.7 %id)
BG106008 lymph, lymphoma, cell line .a 1354 to 2081 1 to 714       714/714
(100 %)
20 diff
(97.2 %id)
AI290198 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1366 to 1722 374 to 18   AAA   357/357
(100 %)
14 diff
(96.1 %id)
AW161170 brain, frontal lobe .a 1373 to 1881 1 to 509       509/509
(100 %)
1 diff
(99.9 %id)
BE178507 head_neck .a 1407 to 2040 32 to 659       628/662
(94 %)
17 diff
(97.5 %id)
DB035439 testis .a 1413 to 1965 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA587875 lung .a 1415 to 1995 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DB174826 kidney, tumor tissue .a 1415 to 1987 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
BG108391 Bone, osteosarcoma, cell line .a 1467 to 2262 1 to 793       793/905
(87 %)
26 diff
(97.2 %id)
DB003810 breast, tumor tissue .a 1478 to 2019 8 to 550   capped   543/549
(98 %)
6 diff
(99.0 %id)
DA594063 lung .a 1519 to 2047 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
BE220199 carcinoid, lung .a 1520 to 2012 493 to 1       493/493
(100 %)
3 diff
(99.4 %id)
W01813 lung .a 1535 to 1911 1 to 377       377/377
(100 %)
1 diff
(99.8 %id)
AF086118   .a 1536 to 2009 1 to 474   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 474/474
(100 %)
0 diff
(100 %id)
N70760 lung .a 1547 to 2009 471 to 1       471/471
(100 %)
13 diff
(97.3 %id)
AK092687 skeletal muscle .a 1572 to 3624 1 to 2052   tiling clone, available from FLJ,   2052/2052
(100 %)
1 diff
(100.0 %id)
DA646393 mammary gland .a 1573 to 2330 2 to 760   capped   759/759
(100 %)
4 diff
(99.5 %id)
DA894204 skeletal muscle .a 1573 to 2131 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA139220 alzheimer cortex .a 1574 to 2111 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA569130 whole embryo, mainly head .a 1584 to 2330 2 to 748   capped   747/749
(99 %)
4 diff
(99.5 %id)
BE221405 carcinoid, lung .a 1611 to 2008 398 to 1       398/398
(100 %)
0 diff
(100 %id)
BQ231943 melanotic melanoma, skin .a 1622 to 2423 1 to 825       825/957
(86 %)
38 diff
(96.1 %id)
BG150053 carcinoid, lung .a 1658 to 2012 355 to 1       355/355
(100 %)
0 diff
(100 %id)
BM836668 Ascites, stomach .a 1660 to 2110 1 to 451       451/451
(100 %)
1 diff
(99.8 %id)
DA568131 whole embryo, mainly head .a 1682 to 2363 2 to 691   capped   690/747
(92 %)
8 diff
(99.0 %id)
DA685792   .a 1689 to 2233 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA256641 caudate nucleus .a 1700 to 2266 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA617643   .a 1716 to 2287 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA703800   .a 1733 to 2277 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA007673   .a 1738 to 2284 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
CN289920 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1751 to 2301 1 to 551       551/552
(99 %)
2 diff
(99.7 %id)
CN290168 embryonic stem cells, DMSO-treated H9 cellline .a 1856 to 2256 1 to 401       401/401
(100 %)
0 diff
(100 %id)
BF171607 blood .a 1943 to 2190 1 to 247       247/247
(100 %)
1 diff
(99.6 %id)
BG033550 breast, mammary adenocarcinoma, cell line .a 2074 to 2782 1 to 704       704/923
(76 %)
15 diff
(98.4 %id)
BG178046 adenocarcinoma, cell line, Prostate .a 2077 to 2728 1 to 660       660/721
(91 %)
18 diff
(97.6 %id)
DA360213 subthalamic nucleus .a 2079 to 2622 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
BU169972 large cell carcinoma, lung .a 2101 to 2953 1 to 861       861/932
(92 %)
22 diff
(97.7 %id)
CA421305 Bone, Enchondroma cell line .a 2128 to 2772 662 to 18   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 645/645
(100 %)
1 diff
(99.9 %id)
BX505984   .a 2137 to 2654 1 to 518       518/518
(100 %)
3 diff
(99.5 %id)
CA421340 Bone, Enchondroma cell line .a 2139 to 2772 651 to 18   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 634/634
(100 %)
0 diff
(100 %id)
DB355094 whole embryo, mainly head .a 2223 to 2772 541 to 1       541/543
(99 %)
18 diff
(96.7 %id)
AW070901 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .a 2278 to 2772 495 to 1       495/495
(100 %)
0 diff
(100 %id)
BG222419 brain, glioblastoma with probably TP53 mutation andwithout EGFR amplification .a 2291 to 2773 483 to 1       483/483
(100 %)
0 diff
(100 %id)
BF928848 nervous_tumor .a 2304 to 2592 1 to 289       289/289
(100 %)
0 diff
(100 %id)
CN417860 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2321 to 3032 1 to 713       713/713
(100 %)
2 diff
(99.8 %id)
AV729090 hypothalamus .a 2322 to 2772 1 to 451   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 451/451
(100 %)
0 diff
(100 %id)
AV728973 hypothalamus .a 2322 to 2772 1 to 451   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 451/451
(100 %)
0 diff
(100 %id)
BE543518 cervical carcinoma cell line, cervix .a 2360 to 3088 1 to 728       728/887
(82 %)
30 diff
(96.7 %id)
BQ353318 head_neck .a 2381 to 2525 146 to 2       145/151
(96 %)
0 diff
(100 %id)
BF886385 testis_normal .a 2390 to 2526 137 to 1     Submitted on the opposite strand 137/137
(100 %)
4 diff
(97.1 %id)
TI_59392881   .a 2420 to 3149 89 to 814       726/726
(100 %)
11 diff
(98.5 %id)
BM014817 breast, mammary adenocarcinoma, cell line .a 2421 to 3149 1 to 725       725/725
(100 %)
11 diff
(98.5 %id)
BM459051 melanotic melanoma, skin .a 2422 to 3386 1 to 973       973/1018
(95 %)
23 diff
(97.8 %id)
BG031916 breast, mammary adenocarcinoma, cell line .a 2485 to 3215 1 to 728       728/736
(98 %)
18 diff
(97.6 %id)
BG743498 skin .a 2497 to 3062 186 to 756       571/756
(75 %)
6 diff
(99.3 %id)
AW852632 colon .a 2634 to 3215 599 to 20       580/603
(96 %)
0 diff
(100 %id)
BM907664 large cell carcinoma, lung .a 2648 to 3639 998 to 1     Submitted on the opposite strand 998/1003
(99 %)
20 diff
(98.1 %id)
BE905275 epithelioid carcinoma, Pancreas .a 2651 to 3423 1 to 775       775/809
(95 %)
21 diff
(97.5 %id)
EL953467 eyeball .a 2658 to 3257 23 to 619       597/619
(96 %)
6 diff
(99.1 %id)
BQ312129 breast_normal .a 2684 to 3246 583 to 26       558/584
(95 %)
0 diff
(100 %id)
AW852707 colon .a 2720 to 3252 553 to 22       532/553
(96 %)
0 diff
(100 %id)
AW947186 lung_tumor .a 2721 to 3214 495 to 3     Submitted on the opposite strand 493/498
(98 %)
0 diff
(100 %id)
BQ330102 lung_tumor .a 2721 to 3211 491 to 1       491/492
(99 %)
13 diff
(97.4 %id)
W26914 eye, retina .a 2732 to 3167 461 to 26       436/464
(93 %)
0 diff
(100 %id)
BE063022 breast .a 2748 to 3266 580 to 61     Submitted on the opposite strand 520/581
(89 %)
0 diff
(100 %id)
BX113529 placenta .a 2749 to 3498 1 to 751   tiling clone,   751/751
(100 %)
1 diff
(99.9 %id)
BG611080 adenocarcinoma, Prostate .a 2750 to 3638 1 to 885       885/891
(99 %)
32 diff
(96.5 %id)
N57282 placenta .a 2756 to 3354 1 to 597       597/600
(99 %)
9 diff
(98.5 %id)
BI004602 head_normal .a 2774 to 3021 250 to 3       248/250
(99 %)
0 diff
(100 %id)
BM699458 eye, fetal eyes .a 2774 to 3297 1 to 524       524/524
(100 %)
1 diff
(99.9 %id)
AA100379   .a 2800 to 3176 1 to 380       380/380
(100 %)
3 diff
(99.3 %id)
AA725075 parathyroid gland, parathyroid tumor .a 2807 to 3298 498 to 7       492/498
(98 %)
0 diff
(100 %id)
BI497416 cochlea, ear .a 2827 to 3421 8 to 602       595/602
(98 %)
6 diff
(99.1 %id)
BI859575 breast, mammary adenocarcinoma, cell line .a 2832 to 3608 1 to 796   AAA   796/814
(97 %)
38 diff
(95.4 %id)
TI_57190613   .a 2832 to 3608 91 to 886   AAA   796/814
(97 %)
38 diff
(95.4 %id)
AI703492 carcinoid, lung .a 2837 to 3296 460 to 1       460/460
(100 %)
6 diff
(98.7 %id)
AW612137 Kidney .a 2856 to 3298 446 to 4       443/447
(99 %)
0 diff
(100 %id)
BQ340971 nervous_normal .a 2866 to 3115 1 to 251       251/260
(96 %)
11 diff
(95.8 %id)
BQ353687 head_neck .a 2926 to 3342 419 to 3       417/419
(99 %)
0 diff
(100 %id)
CN417859 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2955 to 3634 680 to 1     Submitted on the opposite strand 680/680
(100 %)
2 diff
(99.8 %id)
BM016022 breast, mammary adenocarcinoma, cell line .a 2961 to 3613 1 to 653   AAA   653/662
(98 %)
37 diff
(94.5 %id)
TI_59394402   .a 2961 to 3615 89 to 741       653/747
(87 %)
37 diff
(95.1 %id)
CX166289 human embryonic stem cells differentiated toan early endodermal cell type .a 2964 to 3761 1 to 798       798/798
(100 %)
0 diff
(100 %id)
BM994816 lung, Metastatic Chondrosarcoma .a 2974 to 3642 669 to 1       669/669
(100 %)
4 diff
(99.5 %id)
BQ020170 Chondrosarcoma, Left Pubic Bone .a 3047 to 3639 593 to 1       593/607
(97 %)
0 diff
(100 %id)
DB355729 whole embryo, mainly head .a 3068 to 3624 554 to 1       554/557
(99 %)
7 diff
(98.8 %id)
DB361069 mammary gland .a 3070 to 3624 555 to 1       555/556
(99 %)
10 diff
(98.3 %id)
DB369174   .a 3070 to 3624 551 to 1       551/552
(99 %)
13 diff
(97.7 %id)
DB368934.
matches multiple genes
  .a 3072 to 3624 543 to 1     also hits gene IREB2 543/546
(99 %)
16 diff
(97.1 %id)
DB371762 ovary, tumor tissue .a 3072 to 3624 551 to 1       551/551
(100 %)
9 diff
(98.4 %id)
DB330957 skeletal muscle .a 3076 to 3624 549 to 1       549/549
(100 %)
0 diff
(100 %id)
AI696372 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 3092 to 3298 211 to 5       207/211
(98 %)
0 diff
(100 %id)
BX645131   .a 3101 to 3644 544 to 1     Submitted on the opposite strand 544/544
(100 %)
0 diff
(100 %id)
AI879394 brain, frontal lobe .a 3111 to 3631 521 to 1       521/521
(100 %)
0 diff
(100 %id)
AI653605 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 3121 to 3629 507 to 1       507/507
(100 %)
4 diff
(99.3 %id)
AI678785 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 3165 to 3638 474 to 1       474/474
(100 %)
0 diff
(100 %id)
AI634691 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3167 to 3624 458 to 1       458/458
(100 %)
0 diff
(100 %id)
BU158255 eye, retinoblastoma .a 3167 to 4029 1 to 870       870/876
(99 %)
15 diff
(98.3 %id)
CK005120 brain/CNS, Human Brain - Frontal Cortex .a 3199 to 3826 1 to 627       627/627
(100 %)
8 diff
(98.8 %id)
AA086150   .a 3213 to 3624 411 to 1       411/411
(100 %)
3 diff
(99.3 %id)
AW157492 brain, frontal lobe .a 3219 to 3631 413 to 1       413/413
(100 %)
0 diff
(100 %id)
AI270524 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 3221 to 3629 409 to 1       409/410
(99 %)
0 diff
(100 %id)
AW467393 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .a 3242 to 3624 383 to 1       383/383
(100 %)
0 diff
(100 %id)
BG110371 Bone, osteosarcoma, cell line .a 3246 to 3876 1 to 632       632/900
(70 %)
51 diff
(94.4 %id)
N67343 cochlea, ear .a 3292 to 3634 340 to 1       340/340
(100 %)
5 diff
(98.6 %id)
AW963226   .a 3315 to 4028 1 to 717       717/726
(98 %)
14 diff
(98.1 %id)
DB354604 whole embryo, mainly head .a 3413 to 3957 542 to 1       542/543
(99 %)
5 diff
(99.1 %id)
BU600220 mixed (pool of 40 RNAs) .a 3456 to 4088 1 to 633   tiling clone, AAA   633/638
(99 %)
2 diff
(99.7 %id)
AW936878 denis_drash .a 3498 to 3859 360 to 2     Submitted on the opposite strand 359/361
(99 %)
0 diff
(100 %id)
BM994764 lung, Metastatic Chondrosarcoma .a 3555 to 4097 561 to 19   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 543/543
(100 %)
0 diff
(100 %id)
AA010299 heart .a 3564 to 3889 1 to 326   fully sequenced,   326/326
(100 %)
0 diff
(100 %id)
TI_149274957   .a 3568 to 4116 633 to 84   tiling clone, AAA Possibly primed on the genome, locally A rich (23/25 A in genome downstream of last aligned base) 550/1002
(54 %)
6 diff
(99.5 %id)
BU676436 lung, Primary Lung Epithelial Cells .a 3568 to 4116 568 to 19   AAA Possibly primed on the genome, locally A rich (23/25 A in genome downstream of last aligned base) 550/648
(84 %)
6 diff
(99.1 %id)
AA865829 Kidney .a 3582 to 3896 1 to 315     Submitted on the opposite strand 315/315
(100 %)
4 diff
(98.8 %id)
N29860 placenta .a 3643 to 4089 449 to 2       448/450
(99 %)
0 diff
(100 %id)
AA010300 heart .a 3859 to 4116 261 to 1   fully sequenced,   261/261
(100 %)
0 diff
(100 %id)
AL539268.
matches multiple genes
brain, fetal brain .b 1 to 933 1 to 938 S2I Q15R T16R R17A A18R ... tiling clone, also hits gene TMEM159 938/938
(100 %)
12 diff
(98.8 %id)
T72121 Liver .b 16 to 347 1 to 341       341/345
(98 %)
19 diff
(94.5 %id)
BX419759 brain, fetal brain .b 20 to 1146 1 to 1112       1112/1129
(98 %)
24 diff
(97.9 %id)
TI_57166433   .b 28 to 841 36 to 855       820/855
(95 %)
18 diff
(97.9 %id)
BQ072583 leukocyte .b 38 to 909 16 to 893   tiling clone,   878/1073
(81 %)
39 diff
(96.4 %id)
AL553612 placenta, Placenta Cot 25-normalized .b 62 to 976 1 to 915   tiling clone,   915/915
(100 %)
0 diff
(100 %id)
AL567752.
matches multiple genes
brain, fetal brain .b 951 to 1912 962 to 1   tiling clone, also hits gene TMEM159 962/962
(100 %)
3 diff
(99.7 %id)
AL576641 placenta, Placenta Cot 25-normalized .b 1043 to 1985 939 to 1   tiling clone,   939/939
(100 %)
8 diff
(99.2 %id)
T71977 Liver .b 1707 to 1924 258 to 40       219/258
(84 %)
0 diff
(100 %id)
CN281594 embryonic stem cells, cell lines H1, H7, andH9 .c 1 to 754 1 to 753   tiling clone,   753/753
(100 %)
6 diff
(99.3 %id)
CB993467 placenta, pre-eclamptic placenta .c 2 to 604 29 to 641   tiling clone,   613/855
(71 %)
26 diff
(97.0 %id)
DR761757 embryonic stem .c 20 to 690 23 to 693       671/693
(96 %)
6 diff
(99.2 %id)
DA380746 thalamus .c 21 to 590 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DW428655 Liver .c 375 to 639 10 to 275       266/275
(96 %)
16 diff
(94.2 %id)
BF742652 breast .c 425 to 759 336 to 3   tiling clone, Submitted on the opposite strand 334/336
(99 %)
0 diff
(100 %id)
BQ229536 large cell carcinoma, lung .d 1 to 772 1 to 780 exact tiling clone,   780/804
(97 %)
13 diff
(98.4 %id)
CN281585 embryonic stem cells, DMSO-treated H9 cellline .e 1 to 550 9 to 558 exact tiling clone,   550/558
(98 %)
6 diff
(99.0 %id)
BF940589 fibrotheoma, ovary .f-u 1 to 323 1 to 323   tiling clone, Submitted on the opposite strand 323/323
(100 %)
1 diff
(99.7 %id)
DN995115 brain, whole brain .f-u 64 to 646 1 to 582   tiling clone,   582/585
(99 %)
6 diff
(99.0 %id)
BM801332 duodenal adenocarcinoma, cell line, small intestine .f-u 522 to 1330 1 to 822   tiling clone,   822/890
(92 %)
28 diff
(96.9 %id)
BI063082 uterus_tumor .g 1 to 408 417 to 11 D65M D66A F67L E68S C69V ... tiling clone,   407/417
(97 %)
2 diff
(99.6 %id)
AA554676 breast .h 1 to 453 453 to 1 R56C tiling clone,   453/453
(100 %)
1 diff
(99.8 %id)
BE709779 head_neck .h 231 to 362 149 to 18   tiling clone,   132/149
(88 %)
0 diff
(100 %id)
AK056423   .i 1 to 3902 1 to 3902 exact tiling clone, available from FLJ,   3902/3902
(100 %)
7 diff
(99.9 %id)
DA739636   .i 2 to 520 2 to 520 exact capped   519/519
(100 %)
2 diff
(99.7 %id)
BF088949 head_neck .i 332 to 735 1 to 408       408/408
(100 %)
8 diff
(98.1 %id)
DA235168 brain .i 383 to 846 2 to 465   capped   464/464
(100 %)
2 diff
(99.6 %id)
DA691437   .i 388 to 962 2 to 576   tiling clone, capped   575/575
(100 %)
2 diff
(99.7 %id)
BM769142 stomach .i 530 to 1015 1 to 486   tiling clone,   486/486
(100 %)
0 diff
(100 %id)
AA318798 adrenal gland .i 560 to 915 1 to 359       359/359
(100 %)
8 diff
(97.8 %id)
BF813236 colon_ins .i 692 to 813 1 to 122       122/122
(100 %)
1 diff
(99.2 %id)
CD359843 testis .i 694 to 1211 76 to 601       526/1188
(44 %)
28 diff
(97.7 %id)
DA123196 cerebellum .i 731 to 1196 2 to 468   capped   467/467
(100 %)
1 diff
(99.8 %id)
DA811786 ovary, tumor tissue .i 925 to 1641 2 to 720   capped   719/723
(99 %)
7 diff
(99.1 %id)
BG741166 skin .i 926 to 1799 1 to 876   tiling clone,   876/900
(97 %)
12 diff
(98.7 %id)
BM798348 Ascites, stomach .i 1008 to 1497 1 to 490       490/490
(100 %)
1 diff
(99.8 %id)
BM687161 eye, optic nerve .i 1055 to 1500 9 to 454   fully sequenced,   446/454
(98 %)
6 diff
(98.7 %id)
BM823662 Ascites, stomach .i 1241 to 1712 1 to 472       472/472
(100 %)
0 diff
(100 %id)
BM672549 eye, optic nerve .i 1470 to 1798 347 to 19   fully sequenced, AAA   329/329
(100 %)
1 diff
(99.7 %id)
DB371017 ovary, tumor tissue .i 2529 to 3050 521 to 1       521/523
(99 %)
9 diff
(98.3 %id)
DB324628   .i 3427 to 3902 477 to 1       477/481
(99 %)
3 diff
(99.4 %id)
BQ028694 placenta, Placenta Choriocarcinoma .i 3867 to 4345 578 to 98   tiling clone, AAA   481/560
(85 %)
0 diff
(100 %id)
AW936879 denis_drash .i 3869 to 4120 258 to 6     Submitted on the opposite strand 253/299
(84 %)
0 diff
(100 %id)
AA425874 ovarian tumor, ovary .i 3884 to 4286 404 to 1       404/404
(100 %)
1 diff
(99.8 %id)
BF888851 testis_normal .i 3906 to 4309 403 to 1     Submitted on the opposite strand 403/495
(81 %)
2 diff
(99.6 %id)
AI339732 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .i 3919 to 4400 482 to 1       482/482
(100 %)
0 diff
(100 %id)
AW515041 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .i 3933 to 4394 462 to 1       462/462
(100 %)
0 diff
(100 %id)
AA768334 germinal center B cell .i 3944 to 4366 444 to 22   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 423/423
(100 %)
0 diff
(100 %id)
AI383487 B-cell, chronic lymphotic leukemia .i 4004 to 4401 398 to 1       398/398
(100 %)
0 diff
(100 %id)
BF888921 testis_normal .i 4010 to 4322 314 to 6     Submitted on the opposite strand 309/314
(98 %)
0 diff
(100 %id)
AI200629 lung .i 4073 to 4361 295 to 7       289/295
(97 %)
0 diff
(100 %id)
BE348800 carcinoid, lung .i 4083 to 4370 288 to 2       287/288
(99 %)
0 diff
(100 %id)
AI140022 heart .i 4084 to 4366 322 to 40   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 283/283
(100 %)
0 diff
(100 %id)
AV726532 hypothalamus .i 4097 to 4414 18 to 340   tiling clone,   323/359
(89 %)
4 diff
(98.9 %id)
AI094333 heart .i 4123 to 4419 297 to 1   tiling clone,   297/297
(100 %)
2 diff
(99.4 %id)
TI_57189127   .i 4126 to 4366 84 to 323   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 240/240
(100 %)
1 diff
(99.6 %id)
AK124703 amygdala .j-u 1 to 3611 2 to 3612 exact tiling clone, available from FLJ,   3612/3612
(100 %)
18 diff
(99.6 %id)
DA187551 amygdala .j-u 1 to 474 2 to 475   capped   474/474
(100 %)
14 diff
(97.1 %id)
BX482595   .j-u 146 to 733 1 to 590   tiling clone,   590/590
(100 %)
7 diff
(98.9 %id)
AI905414 breast .j-u 286 to 957 23 to 695       673/697
(96 %)
10 diff
(98.6 %id)
BM790358 Ascites, stomach .j-u 319 to 787 1 to 469       469/469
(100 %)
2 diff
(99.6 %id)
BM013864 breast, mammary adenocarcinoma, cell line .j-u 436 to 1034 1 to 599   tiling clone, AAA   599/599
(100 %)
0 diff
(100 %id)
TI_59391803   .j-u 436 to 1034 88 to 686   AAA   599/599
(100 %)
0 diff
(100 %id)
DB303208 amygdala .j-u 3062 to 3611 550 to 1       550/550
(100 %)
1 diff
(99.9 %id)
DA674799   .k 1 to 566 2 to 567 exact tiling clone, capped   566/566
(100 %)
3 diff
(99.5 %id)
AW367483 head_neck .l-u 1 to 461 465 to 3 Q10P L11A A13S S14F A15C ... tiling clone,   463/465
(99 %)
0 diff
(100 %id)
BQ326460 colon_normal .l-u 83 to 402 325 to 5   tiling clone,   321/327
(98 %)
0 diff
(100 %id)
AV695430 hepatocellular carcinoma Gene CIAO1, variant not shown         Suspected internal deletion, this clone was ignored    
AV705408 adrenal gland Gene CIAO1, variant not shown         Suspected internal deletion, this clone was ignored    
BP260589 small intestine Gene CIAO1, variant not shown         This clone was ignored    
AU099425   Gene CIAO1, variant not shown         This clone was ignored    
BP261289 small intestine Gene CIAO1, variant not shown         This clone was ignored    
BM984025 lung, Primary Lung Epithelial Cells Gene CIAO1, variant not shown              
BQ773291 Chondrosarcoma Cell line Gene CIAO1, variant not shown         This clone was ignored    
BQ311473 breast_normal Gene CIAO1, variant not shown         This clone was ignored    
BM692210 eye, human retina Gene CIAO1, variant not shown       fully sequenced, This clone was ignored    
BU728755 eye, human retina Gene CIAO1, variant not shown       fully sequenced, This clone was ignored    
AK098406 brain Gene CIAO1, variant not shown       available from FLJ, This clone was ignored    
AK299503 brain Gene CIAO1, variant not shown         Suspected internal deletion, this clone was ignored    
DA060508 cerebellum Gene CIAO1, variant not shown       capped Suspected internal deletion, this clone was ignored    
AI446574 poorly differentiated adenocarcinoma withsignet ring cell features, stomach Gene CIAO1, variant not shown         Suspected internal deletion, this clone was ignored    
AI969079 pooled germ cell tumors Gene CIAO1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AI990832 pooled germ cell tumors Gene CIAO1, variant not shown       AAA Suspected internal deletion, suspected internal deletion, this clone was ignored    
AI968815 pooled germ cell tumors Gene CIAO1, variant not shown         Suspected internal deletion, this clone was ignored    
AW292152   Gene CIAO1, variant not shown       AAA This clone was ignored    
AW338370 adenocarcinoma, Pancreas Gene CIAO1, variant not shown         Suspected internal deletion, this clone was ignored    
BM015219 breast, mammary adenocarcinoma, cell line Gene CIAO1, variant not shown         This clone was ignored    
TI_59393438   Gene CIAO1, variant not shown         This clone was ignored    
DC374187 brain Gene CIAO1, variant not shown         Suspected internal deletion, this clone was ignored    
TI_149283343   Gene CIAO1, variant not shown       AAA Possibly primed on the genome, locally A rich (23/26 A in genome downstream of last aligned base)    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h, .i, .j-u, .k, .l-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI