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Gene CHRNB4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
42 supporting clones for gene CHRNB4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
U48861   .a 1 to 2456 1 to 2455 exact tiling clone,   2455/2455
(100 %)
15 diff
(99.4 %id)
BC096080 PCR rescued clones .a 6 to 1692 1 to 1687 exact tiling clone,   1687/1687
(100 %)
2 diff
(99.9 %id)
BC096082 PCR rescued clones .a 6 to 1692 1 to 1687 exact     1687/1687
(100 %)
2 diff
(99.9 %id)
NM_000750.3   .a 9 to 2456 1 to 2448 exact RefSeq,   2448/2448
(100 %)
0 diff
(100 %id)
Y08416   .a 30 to 1617 1 to 1588 exact     1588/1588
(100 %)
1 diff
(100.0 %id)
U62439   .a 35 to 1949 1 to 1915 exact     1915/1915
(100 %)
1 diff
(100.0 %id)
CN366252 embryonic stem cells, cell lines H1, H7, andH9 .a 107 to 663 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
X68275   .a 261 to 1620 1 to 1360       1360/1360
(100 %)
2 diff
(99.9 %id)
BF311784 brain, neuroblastoma .a 887 to 1633 1 to 740       740/801
(92 %)
14 diff
(98.3 %id)
CR617765 Neuroblastoma Cot 25-normalized .a 947 to 2631 1 to 1685   tiling clone,   1685/1685
(100 %)
0 diff
(100 %id)
BX374818 Neuroblastoma Cot 25-normalized .a 947 to 2002 1 to 1047       1047/1074
(97 %)
21 diff
(98.1 %id)
BP248334 Kidney .a 1027 to 1606 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BM557937 astrocytoma grade IV, cell line, brain .b 1 to 727 1 to 727   tiling clone,   727/743
(97 %)
3 diff
(99.6 %id)
BX425453 neuroblastoma .b 409 to 1304 1 to 896   tiling clone,   896/896
(100 %)
0 diff
(100 %id)
BY795907 eye .b 2097 to 2724 1 to 628   tiling clone,   628/628
(100 %)
0 diff
(100 %id)
BX390125 Neuroblastoma Cot 25-normalized .b 2103 to 3016 1 to 908       908/912
(99 %)
10 diff
(99.0 %id)
BX433784 neuroblastoma .b 2138 to 3014 883 to 1       883/906
(97 %)
55 diff
(94.0 %id)
CD691021 normal nasopharynx .b 2346 to 2928 43 to 625       583/625
(93 %)
6 diff
(99.1 %id)
BQ718501 sympathetic trunk .b 2455 to 3358 1 to 907   tiling clone,   907/908
(99 %)
13 diff
(98.6 %id)
BX111701 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 2584 to 3019 450 to 15   AAA   436/436
(100 %)
2 diff
(99.6 %id)
AI625439 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 2596 to 3019 439 to 16   AAA   424/424
(100 %)
1 diff
(99.8 %id)
BX329411 Neuroblastoma Cot 25-normalized .b 2693 to 3013 320 to 1       613/690
(88 %)
19 diff
(97.3 %id)
BC096081 PCR rescued clones .c 1 to 708 1 to 708 exact tiling clone,   708/708
(100 %)
2 diff
(99.8 %id)
BC096083 PCR rescued clones .c 1 to 708 1 to 708 exact     708/708
(100 %)
2 diff
(99.8 %id)
BX098202   .d 1 to 407 1 to 408 E10X T11D P12T A13S Q14P ... tiling clone,   408/409
(99 %)
3 diff
(99.3 %id)
AA905514 pooled .d 81 to 578 500 to 5       496/500
(99 %)
2 diff
(99.6 %id)
AI024204   .d 135 to 578 448 to 5   tiling clone,   444/453
(98 %)
7 diff
(98.5 %id)
AA909339 pooled .d 307 to 524 218 to 1   tiling clone,   218/218
(100 %)
2 diff
(99.1 %id)
BX353375 Neuroblastoma Cot 25-normalized .e 1 to 812 1 to 811 exact tiling clone,   811/811
(100 %)
5 diff
(99.4 %id)
BX348201 Neuroblastoma Cot 25-normalized .e 718 to 1554 1 to 845   tiling clone,   845/888
(95 %)
46 diff
(94.9 %id)
AA101302 brain, neuroepithelial cells .e 935 to 1239 1 to 306       306/306
(100 %)
5 diff
(98.4 %id)
BX283993 brain, neuroblastoma .e 1029 to 1552 1 to 524   tiling clone,   524/524
(100 %)
1 diff
(99.9 %id)
AA431307.
matches multiple genes
  .e 1249 to 1600 353 to 1   tiling clone, also hits gene TMEM8A 353/353
(100 %)
23 diff
(93.5 %id)
DB022694 testis .f 1 to 542 2 to 544 exact tiling clone, to resequence, capped   543/549
(98 %)
3 diff
(99.5 %id)
DB336123 testis .f 1340 to 1797 458 to 1   tiling clone, to resequence,   458/458
(100 %)
0 diff
(100 %id)
DB049731 testis .g 1 to 565 2 to 566 exact tiling clone, capped   567/567
(100 %)
1 diff
(99.9 %id)
BG461297   .h 1 to 602 608 to 8 F2X S3H P4F L5G E6G ... tiling clone, Submitted on the opposite strand 601/614
(97 %)
5 diff
(99.2 %id)
BG460158   .h 33 to 600 42 to 602   tiling clone,   561/828
(67 %)
13 diff
(98.5 %id)
AK310443 testis .i 1 to 2079 2 to 2080 exact tiling clone,   2080/2080
(100 %)
2 diff
(100.0 %id)
DB079296 testis .i 1 to 554 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DB049606 testis .j 1 to 571 2 to 572 exact tiling clone, capped   571/571
(100 %)
4 diff
(99.3 %id)
DB021727 testis .j 17 to 572 2 to 559 G2A V97C N98E I99H tiling clone, capped   558/558
(100 %)
3 diff
(99.5 %id)
DB063962 testis .k 1 to 569 2 to 571 exact tiling clone, capped   570/570
(100 %)
1 diff
(99.9 %id)
DB053571 testis .l 1 to 569 2 to 569 exact tiling clone, capped   568/568
(100 %)
4 diff
(99.3 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI