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Gene SPEM1andFGF11andCHRNB1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
244 supporting clones for gene SPEM1andFGF11andCHRNB1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC371555   .a 1 to 562 1 to 563   tiling clone,   563/563
(100 %)
3 diff
(99.5 %id)
AU099979   .a 2 to 301 1 to 300       300/300
(100 %)
2 diff
(99.4 %id)
BP273693   .a 2 to 590 1 to 589       589/589
(100 %)
5 diff
(99.2 %id)
DC339844 thalamus .a 5 to 541 1 to 538       538/538
(100 %)
3 diff
(99.5 %id)
DC340272 thalamus .a 5 to 534 1 to 530       530/530
(100 %)
0 diff
(100 %id)
DC373199 tongue .a 5 to 597 1 to 593       593/593
(100 %)
0 diff
(100 %id)
DC373721 tongue .a 5 to 586 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC379905 pericardium .a 12 to 572 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
DC339775 thalamus .a 14 to 576 1 to 563       563/563
(100 %)
0 diff
(100 %id)
BF308492 muscle, rhabdomyosarcoma .a 27 to 746 1 to 721       721/850
(84 %)
17 diff
(98.0 %id)
BC023553 Muscle, rhabdomyosarcoma .a 28 to 2463 1 to 2437 E32G D124Y tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 2437/2437
(100 %)
3 diff
(99.9 %id)
NM_000747.2   .a 28 to 2464 1 to 2437 exact RefSeq,   2437/2437
(100 %)
0 diff
(100 %id)
DA630401 Kidney .a 31 to 601 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
BP232481 muscle .a 33 to 615 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
BP231460 muscle .a 35 to 616 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
DA823397 pericardium .a 35 to 602 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA762044 tongue .a 36 to 526 2 to 492   capped   491/491
(100 %)
0 diff
(100 %id)
DA820984 pericardium .a 36 to 605 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA823121 pericardium .a 36 to 459 2 to 425   capped   424/424
(100 %)
1 diff
(99.8 %id)
DA826933 pericardium .a 36 to 603 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BX500607 Liver .a 38 to 694 1 to 657       657/657
(100 %)
2 diff
(99.7 %id)
DA764221 tongue .a 38 to 600 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
AK308106 tongue .a 39 to 2168 1 to 2129 S89N P501L     2129/2129
(100 %)
3 diff
(99.9 %id)
DC373565 tongue .a 39 to 611 1 to 573       573/573
(100 %)
1 diff
(99.9 %id)
BC011371 Eye, retinoblastoma .a 40 to 2422 1 to 2383 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 2383/2383
(100 %)
0 diff
(100 %id)
DA761558 tongue .a 40 to 541 2 to 503   capped   502/502
(100 %)
0 diff
(100 %id)
DA821547 pericardium .a 40 to 586 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
X14830   .a 53 to 1702 1 to 1650 A15P I210N     1650/1650
(100 %)
7 diff
(99.6 %id)
CN277870 embryonic stem cells, DMSO-treated H9 cellline .a 56 to 259 1 to 204       204/204
(100 %)
0 diff
(100 %id)
BE783787 eye, retinoblastoma .a 60 to 755 1 to 702       702/704
(99 %)
24 diff
(96.6 %id)
TI_1948154724   .a 69 to 777 129 to 840   fully sequenced,   712/840
(84 %)
31 diff
(96.4 %id)
TI_1948154883   .a 69 to 644 126 to 703       578/1402
(41 %)
50 diff
(96.5 %id)
BE926694 breast .a 162 to 722 9 to 570       562/572
(98 %)
22 diff
(96.2 %id)
AA211274 muscle, skeletal muscle .a 294 to 859 1 to 575       575/575
(100 %)
33 diff
(94.3 %id)
BG829699 epithelioid carcinoma cell line, Pancreas .a 482 to 726 1 to 246       246/246
(100 %)
3 diff
(98.8 %id)
TI_1948154884   .a 678 to 1573 1016 to 122       895/1293
(69 %)
24 diff
(98.2 %id)
TI_1948154565   .a 699 to 1573 998 to 120       879/1343
(65 %)
49 diff
(96.4 %id)
TI_1948154412   .a 715 to 1573 984 to 123       862/1355
(63 %)
19 diff
(98.6 %id)
BQ945360 carcinoma, cell line, Prostate .a 743 to 1625 1 to 899       899/942
(95 %)
40 diff
(95.8 %id)
TI_1948154725   .a 747 to 1573 952 to 124   fully sequenced,   829/952
(87 %)
7 diff
(99.3 %id)
BF733732 amnion_normal .a 756 to 927 211 to 37     Submitted on the opposite strand 175/211
(82 %)
6 diff
(97.2 %id)
BF569238 Kidney, renal carcinoma (ascites) .a 801 to 1593 1 to 795       791/915
(86 %)
38 diff
(95.9 %id)
BP252851 Kidney .a 1147 to 1729 1 to 583       583/583
(100 %)
0 diff
(100 %id)
T53369 placenta .a 1227 to 1352 35 to 160       126/160
(78 %)
5 diff
(96.9 %id)
BI092305 cervix .a 1292 to 2032 1 to 742       742/980
(75 %)
13 diff
(98.7 %id)
BQ548884 insulinoma, Pancreas .a 1297 to 1870 1 to 574     Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 574/574
(100 %)
5 diff
(99.2 %id)
BU663284 blood .a 1318 to 1922 21 to 625       605/625
(96 %)
6 diff
(99.1 %id)
BE392727 endometrium, adenocarcinoma cell line, uterus .a 1347 to 1992 1 to 686       634/690
(91 %)
40 diff
(94.3 %id)
CB141884 Liver .a 1425 to 1839 1 to 415       415/415
(100 %)
1 diff
(99.8 %id)
BQ548594 insulinoma, Pancreas .a 2003 to 2463 477 to 17   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 461/461
(100 %)
0 diff
(100 %id)
CX786141 human embryonic stem cells .b 1 to 804 1 to 804   tiling clone,   804/804
(100 %)
0 diff
(100 %id)
AK298938   .b 20 to 1623 1 to 1604 exact tiling clone,   1604/1604
(100 %)
0 diff
(100 %id)
DC367792   .b 20 to 579 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
AU128287   .b 20 to 500 2 to 482   capped   481/481
(100 %)
0 diff
(100 %id)
AU150597   .b 1731 to 2308 580 to 1   tiling clone,   580/584
(99 %)
14 diff
(97.7 %id)
CD013898   .c 1 to 1837 1 to 1837 I138N tiling clone,   1837/1837
(100 %)
2 diff
(99.9 %id)
BQ301954 breast .d 1 to 671 1 to 670   tiling clone,   670/672
(99 %)
12 diff
(98.3 %id)
BP255312 Kidney .d 103 to 686 1 to 584   tiling clone,   584/584
(100 %)
1 diff
(99.9 %id)
BF816057 colon_ins .d 373 to 953 1 to 587   tiling clone,   587/589
(99 %)
31 diff
(94.8 %id)
BC033882 Brain, adult medulla .e 1 to 981 1 to 981 exact tiling clone, available from MGC, AAA   981/981
(100 %)
0 diff
(100 %id)
BM553166 brain, medulla .e 1 to 956 1 to 968 N229T G230V G231X A234G V235G ...     968/1109
(87 %)
7 diff
(99.4 %id)
NM_199339.2   .e 1 to 981 1 to 981 exact RefSeq, AAA   981/981
(100 %)
0 diff
(100 %id)
TI_1948071004   .e 25 to 623 124 to 725       602/1035
(58 %)
18 diff
(98.3 %id)
TI_1948071619   .e 25 to 633 124 to 733       610/988
(61 %)
23 diff
(97.7 %id)
TI_1948071620   .e 25 to 952 132 to 1058       927/1250
(74 %)
33 diff
(97.4 %id)
CV030914 mixed .e 26 to 663 1 to 638       638/638
(100 %)
0 diff
(100 %id)
TI_1948070696   .e 28 to 954 1050 to 126       925/1196
(77 %)
14 diff
(98.9 %id)
TI_1948071311   .e 33 to 676 136 to 779       644/1005
(64 %)
20 diff
(98.1 %id)
TI_1948071312   .e 33 to 954 147 to 1078       932/1307
(71 %)
26 diff
(98.1 %id)
TI_1948071622   .e 35 to 954 1044 to 132       913/1176
(77 %)
36 diff
(97.0 %id)
TI_1948071621   .e 71 to 954 1013 to 128       884/1230
(71 %)
23 diff
(98.2 %id)
TI_1948071006   .e 164 to 954 915 to 124       792/1241
(63 %)
5 diff
(99.6 %id)
TI_1948071313   .e 165 to 954 917 to 125       793/1311
(60 %)
7 diff
(99.5 %id)
TI_1948070697   .e 169 to 954 908 to 129       780/1192
(65 %)
8 diff
(99.4 %id)
TI_1948071314   .e 174 to 954 907 to 129       779/1156
(67 %)
4 diff
(99.7 %id)
TI_1948071007   .e 229 to 954 855 to 131       725/1170
(61 %)
0 diff
(100 %id)
BX098498   .e 420 to 885 1 to 466       466/466
(100 %)
1 diff
(99.8 %id)
DB511987 testis .e 552 to 981 1 to 431     Submitted on the opposite strand 431/431
(100 %)
3 diff
(99.4 %id)
AA936128 pooled germ cell tumors .e 552 to 982 421 to 1       421/421
(100 %)
13 diff
(97.0 %id)
AI207997   .e 555 to 983 433 to 5       429/433
(99 %)
0 diff
(100 %id)
AW172597 pooled .e 556 to 987 433 to 3       431/433
(99 %)
0 diff
(100 %id)
AI262742   .e 606 to 986 394 to 13   AAA   382/382
(100 %)
6 diff
(98.5 %id)
AI419742 pooled .e 732 to 987 259 to 4       256/259
(98 %)
0 diff
(100 %id)
AK294880 brain .f 1 to 2394 1 to 2388 exact tiling clone,   2388/2388
(100 %)
8 diff
(99.7 %id)
DC322389 brain .f 1 to 546 1 to 540       540/540
(100 %)
4 diff
(99.3 %id)
DC408824 thymus .f 507 to 1034 1 to 529       529/529
(100 %)
1 diff
(99.9 %id)
BQ345912 nervous_tumor .f 668 to 1224 558 to 1       558/579
(96 %)
24 diff
(95.9 %id)
AW062966 stomach .f 1349 to 1585 158 to 394       237/396
(59 %)
7 diff
(98.3 %id)
BI033647 nervous_normal .f 1375 to 1592 238 to 26       213/257
(82 %)
4 diff
(98.5 %id)
TI_59395391   .f 1581 to 2412 110 to 949       840/910
(92 %)
47 diff
(94.9 %id)
BQ688060 ductal carcinoma, cell line, Pancreas .f 1582 to 2410 1 to 846       846/911
(92 %)
39 diff
(95.8 %id)
CD691168 normal nasopharynx .f 2292 to 2882 16 to 606   tiling clone,   591/606
(97 %)
8 diff
(98.7 %id)
DA534116 brain .f 2300 to 2808 2 to 510   capped   509/509
(100 %)
0 diff
(100 %id)
CX164350 human embryonic stem cells differentiated toan early endodermal cell type .f 2300 to 3107 1 to 807       807/807
(100 %)
1 diff
(99.9 %id)
BE537383 cervix .f 2309 to 3054 1 to 750       750/818
(91 %)
18 diff
(97.8 %id)
R13837 whole brain .f 2314 to 2831 1 to 524       524/524
(100 %)
21 diff
(96.0 %id)
CD699958 normal nasopharynx .f 2323 to 2760 23 to 460       438/460
(95 %)
6 diff
(98.7 %id)
AA399207.
matches multiple genes
ovarian tumor, ovary .f 2325 to 2872 5 to 546     also hits gene ZNF706 542/546
(99 %)
25 diff
(95.5 %id)
AW160665 brain, frontal lobe .f 2326 to 2836 1 to 511   fully sequenced, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 511/511
(100 %)
3 diff
(99.5 %id)
CB992791 placenta, pre-eclamptic placenta .f 2326 to 3106 28 to 820       793/821
(96 %)
27 diff
(96.8 %id)
CB994947 placenta, pre-eclamptic placenta .f 2326 to 3031 28 to 741       714/782
(91 %)
24 diff
(97.0 %id)
AW163147 brain, frontal lobe .f 2329 to 2712 1 to 385       385/385
(100 %)
4 diff
(99.0 %id)
BQ049806 lymph, lymphoma, cell line .f 2331 to 2830 22 to 520       499/1449
(34 %)
18 diff
(98.8 %id)
EL955565 eyeball .f 2335 to 2593 1 to 259       259/259
(100 %)
3 diff
(98.9 %id)
BU952134 Pancreas, Purified pancreatic islet .f 2343 to 2911 1 to 569       569/569
(100 %)
2 diff
(99.7 %id)
BQ709713 Spleen .f 2365 to 2962 1 to 604       604/1037
(58 %)
11 diff
(99.0 %id)
BE839109 prostate_normal .f 2366 to 2633 314 to 47       268/314
(85 %)
0 diff
(100 %id)
T29001 blood, white blood cells .f 2373 to 2608 1 to 238       238/238
(100 %)
4 diff
(98.4 %id)
AW958582   .f 2374 to 2944 1 to 570       570/570
(100 %)
4 diff
(99.3 %id)
BM459117 melanotic melanoma, skin .f 2375 to 3248 1 to 872       872/1053
(82 %)
14 diff
(98.7 %id)
BM542258 melanotic melanoma, skin .f 2377 to 3237 1 to 863       863/999
(86 %)
30 diff
(97.0 %id)
CU453570 epidermis .f 2378 to 2961 586 to 5     Submitted on the opposite strand 582/592
(98 %)
8 diff
(98.7 %id)
BF685888 leiomyosarcoma cell line, uterus .f 2379 to 2846 1 to 468       468/914
(51 %)
2 diff
(99.8 %id)
AV710968 adrenal cortico adenoma for Cushing'ssyndrome .f 2430 to 3030 20 to 615       596/618
(96 %)
65 diff
(89.5 %id)
BG500518 adenocarcinoma, Prostate .f 2485 to 3284 1 to 807       807/813
(99 %)
31 diff
(96.2 %id)
AW157173 brain, frontal lobe .f 2757 to 3224 470 to 3       468/470
(99 %)
0 diff
(100 %id)
CN276860 embryonic stem cells, DMSO-treated H9 cellline .f 2775 to 3132 1 to 358   tiling clone,   358/358
(100 %)
0 diff
(100 %id)
AW162332 brain, frontal lobe .f 2806 to 3381 601 to 27   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 575/575
(100 %)
8 diff
(98.7 %id)
AW162314 brain, frontal lobe .f 2829 to 3381 573 to 27   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 547/547
(100 %)
11 diff
(98.0 %id)
AW407007 lymph .f 3015 to 3351 7 to 343       337/343
(98 %)
0 diff
(100 %id)
TI_154144855   .f 3015 to 3571 83 to 643   tiling clone,   561/562
(99 %)
15 diff
(97.4 %id)
AA112864 muscle, skeletal muscle .f 3095 to 3358 1 to 270   fully sequenced,   270/270
(100 %)
2 diff
(99.3 %id)
AW273235 serous papillary carcinoma, high grade, 2pooled tumors, uterus .f 3166 to 3677 512 to 1   tiling clone,   512/512
(100 %)
0 diff
(100 %id)
BE350013 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .f 3172 to 3677 506 to 1       506/506
(100 %)
0 diff
(100 %id)
BX110786 whole brain .f 3187 to 3673 503 to 17       487/503
(96 %)
0 diff
(100 %id)
AW273177 serous papillary carcinoma, high grade, 2pooled tumors, uterus .f 3215 to 3677 463 to 1       463/463
(100 %)
0 diff
(100 %id)
BU951875 Pancreas, Purified pancreatic islet .f 3216 to 3676 461 to 1       461/461
(100 %)
0 diff
(100 %id)
AA737129 Prostate, tumor .f 3327 to 3645 1 to 319       319/319
(100 %)
3 diff
(99.1 %id)
AA088900 muscle, skeletal muscle .f 3328 to 3660 334 to 1   fully sequenced,   334/334
(100 %)
1 diff
(99.8 %id)
AW969541   .f 3338 to 3676 1 to 339   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 339/339
(100 %)
0 diff
(100 %id)
R36983 whole brain .f 3349 to 3677 337 to 8       330/340
(97 %)
0 diff
(100 %id)
BI913855 brain .f 3382 to 3674 1 to 293       293/330
(88 %)
5 diff
(98.5 %id)
T15726   .f 3390 to 3676 289 to 1       289/289
(100 %)
10 diff
(96.6 %id)
AA503863 colon .f 3473 to 3676 246 to 43   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 204/204
(100 %)
1 diff
(99.6 %id)
BG413434 Kidney .f 3486 to 3676 191 to 1       191/191
(100 %)
0 diff
(100 %id)
AI868407 pooled .f 3507 to 3771 267 to 3   tiling clone,   265/267
(99 %)
0 diff
(100 %id)
GD145455   .f 3526 to 3675 1 to 149   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 149/149
(100 %)
3 diff
(98.0 %id)
BC108265 Skin, normal .g 1 to 2206 1 to 2206 exact tiling clone, AAA   2206/2206
(100 %)
1 diff
(100.0 %id)
BG697406 skin .g 1 to 707 1 to 707       707/707
(100 %)
0 diff
(100 %id)
BC032502 Brain, fetal, whole pooled .g 344 to 3056 1 to 2713 exact tiling clone, available from MGC, AAA   2713/2713
(100 %)
2 diff
(100.0 %id)
NM_004112.2   .g 344 to 3056 1 to 2713 exact RefSeq, AAA   2713/2713
(100 %)
2 diff
(100.0 %id)
CN398844 embryonic stem cells, cell lines H1, H7, andH9 .g 394 to 765 1 to 372       372/376
(98 %)
2 diff
(99.5 %id)
AY049782   .g 595 to 1272 1 to 678 exact     678/678
(100 %)
1 diff
(99.9 %id)
U66199   .g 595 to 1272 1 to 678 exact     678/678
(100 %)
0 diff
(100 %id)
BG910446 anaplastic oligodendroglioma with 1p/19qloss, brain .g 781 to 1488 1 to 699       699/699
(100 %)
15 diff
(97.9 %id)
CD618057   .g 831 to 1522 1 to 697       697/697
(100 %)
14 diff
(98.0 %id)
H15590 whole brain .g 969 to 1530 1 to 576       576/595
(96 %)
49 diff
(91.8 %id)
BE618021 eye, retinoblastoma .g 969 to 1720 1 to 758       758/896
(84 %)
32 diff
(96.5 %id)
BU187200 eye, retinoblastoma .g 1082 to 1886 1 to 811       811/906
(89 %)
11 diff
(98.8 %id)
CD618056   .g 1109 to 1824 723 to 10       714/723
(98 %)
3 diff
(99.6 %id)
BM722970 eye, fetal eye .g 1159 to 1719 1 to 561       561/561
(100 %)
6 diff
(99.0 %id)
BE963326 eye, retinoblastoma .g 2238 to 3060 852 to 16   AAA   837/1122
(74 %)
69 diff
(93.9 %id)
BM677432 eye, fetal eye .g 2371 to 3061 709 to 19   tiling clone, AAA   691/691
(100 %)
0 diff
(100 %id)
H15533 whole brain .g 2637 to 2961 430 to 105       326/335
(97 %)
0 diff
(100 %id)
BF880914 lung_tumor .h-u 1 to 469 468 to 1   tiling clone, Submitted on the opposite strand 468/480
(97 %)
0 diff
(100 %id)
BF343158 brain, glioblastoma with EGFR amplification .h-u 147 to 789 1 to 637 L16W E17R G18A V19W G20D ... tiling clone, AAA   637/637
(100 %)
11 diff
(98.3 %id)
BC037421 Lymph, lymphoma .i 1 to 2355 12 to 2365 exact tiling clone, available from MGC, AAA   2354/2371
(99 %)
4 diff
(99.9 %id)
DC297659   .j 1 to 577 2 to 578       578/578
(100 %)
0 diff
(100 %id)
AK293131   .j 1 to 989 2 to 990 exact tiling clone,   990/990
(100 %)
1 diff
(99.9 %id)
BM712074 eye, lens .k 1 to 456 1 to 457   tiling clone,   457/458
(99 %)
3 diff
(99.4 %id)
AB209390 brain .k 843 to 6395 1 to 5553 exact tiling clone,   5553/5553
(100 %)
5 diff
(100.0 %id)
BM454405 lymph, lymphoma, cell line .k 1217 to 1922 1 to 711   available from MGC,   711/1151
(61 %)
16 diff
(98.7 %id)
BX478839   .k 2221 to 2680 1 to 460   tiling clone,   460/460
(100 %)
5 diff
(99.0 %id)
DR002690 fetal brain .k 2520 to 3101 8 to 588       581/588
(98 %)
9 diff
(98.5 %id)
DC373609 tongue .k 2558 to 3145 1 to 588       588/588
(100 %)
2 diff
(99.7 %id)
BG820459 anaplastic oligodendroglioma with 1p/19qloss, brain .k 3862 to 4649 1 to 794       794/794
(100 %)
11 diff
(98.7 %id)
BM740406 stomach .k 3908 to 4524 1 to 617       617/617
(100 %)
0 diff
(100 %id)
BM783551 stomach .k 3908 to 4600 1 to 693       693/693
(100 %)
0 diff
(100 %id)
BG676525 skin, squamous cell carcinoma .k 3964 to 4687 1 to 724       724/724
(100 %)
5 diff
(99.4 %id)
AA463844   .k 3973 to 4421 1 to 448       448/448
(100 %)
2 diff
(99.6 %id)
BM552106 astrocytoma grade IV, cell line, brain .k 3984 to 5047 1 to 1085       1085/1116
(97 %)
39 diff
(96.6 %id)
CD514261 White Matter .k 4043 to 4855 1 to 819   tiling clone,   819/893
(91 %)
11 diff
(98.8 %id)
AA773242 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .k 4178 to 4608 1 to 431       431/431
(100 %)
6 diff
(98.7 %id)
AL528823 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .k 4315 to 5315 1009 to 17       993/1093
(90 %)
0 diff
(100 %id)
BG945702 bladder_tumor .k 4374 to 4946 1 to 569       569/569
(100 %)
19 diff
(96.7 %id)
BG472308 eye, retinoblastoma .k 4483 to 5257 1 to 777       777/777
(100 %)
6 diff
(99.3 %id)
BG479379 choriocarcinoma, placenta .k 4483 to 5258 1 to 780       780/781
(99 %)
11 diff
(98.6 %id)
BF929669 nervous_tumor .k 4491 to 4949 459 to 1     Submitted on the opposite strand 459/459
(100 %)
5 diff
(99.0 %id)
BE251306 eye, retinoblastoma .k 4503 to 5152 1 to 652       652/653
(99 %)
3 diff
(99.6 %id)
BE255077 eye, retinoblastoma .k 4503 to 5104 1 to 603       603/605
(99 %)
2 diff
(99.7 %id)
BE256478 eye, retinoblastoma .k 4503 to 4977 1 to 476       476/477
(99 %)
2 diff
(99.6 %id)
BE255084 eye, retinoblastoma .k 4504 to 5090 1 to 588       588/589
(99 %)
9 diff
(98.5 %id)
R50224 breast .k 4613 to 5059 1 to 450   fully sequenced,   450/450
(100 %)
14 diff
(96.9 %id)
BX115539 breast .k 4618 to 5364 1 to 747   AAA   747/747
(100 %)
0 diff
(100 %id)
CN398845 embryonic stem cells, cell lines H1, H7, andH9 .k 4620 to 4949 13 to 342       330/342
(96 %)
6 diff
(98.3 %id)
TI_149304023   .k 4662 to 5364 785 to 83   AAA   703/707
(99 %)
5 diff
(99.3 %id)
BM981919 lung, Primary Lung Cystic Fibrosis EpithelialCells .k 4679 to 5364 704 to 19   AAA   686/686
(100 %)
2 diff
(99.8 %id)
CA423112 cell lines, Chondrosarcoma .k 4734 to 5364 648 to 19   AAA   630/630
(100 %)
1 diff
(99.9 %id)
AA354789   .k 4735 to 5133 1 to 400       400/400
(100 %)
2 diff
(99.5 %id)
CN398843 embryonic stem cells, cell lines H1, H7, andH9 .k 4774 to 5358 584 to 1     Submitted on the opposite strand 584/584
(100 %)
5 diff
(99.2 %id)
BM670363 eye, lens .k 4801 to 5364 582 to 19   AAA   564/564
(100 %)
0 diff
(100 %id)
TI_159721724   .k 4842 to 5364 608 to 80   AAA   529/984
(53 %)
19 diff
(98.1 %id)
BE222979 brain, oligodendroglioma .k 4867 to 5364 498 to 1       498/498
(100 %)
0 diff
(100 %id)
AI309851 2 pooled tumors (clear cell type), Kidney .k 4901 to 5364 483 to 20   AAA   464/464
(100 %)
14 diff
(97.0 %id)
BF337500 brain, glioblastoma with EGFR amplification .k 4930 to 5364 1 to 438   AAA   438/438
(100 %)
3 diff
(99.4 %id)
BF337588 brain, glioblastoma with EGFR amplification .k 4930 to 5364 1 to 435   AAA   435/435
(100 %)
2 diff
(99.6 %id)
W57641 heart .k 4937 to 5360 439 to 1       439/439
(100 %)
17 diff
(96.2 %id)
AA604985 adrenal adenoma, adrenal gland .k 4941 to 5366 426 to 1       426/426
(100 %)
1 diff
(99.8 %id)
AA601951 adrenal adenoma, adrenal gland .k 4941 to 5072 132 to 1       132/132
(100 %)
0 diff
(100 %id)
BM709915 eye, Retina Foveal and Macular .k 4945 to 5359 1 to 415       415/415
(100 %)
1 diff
(99.8 %id)
AA443763   .k 4946 to 5361 420 to 5       416/420
(99 %)
0 diff
(100 %id)
DB559354 hypothalamus .k 4950 to 5362 1 to 413     Submitted on the opposite strand 413/413
(100 %)
0 diff
(100 %id)
Z19675   .k 4960 to 5350 392 to 1       392/392
(100 %)
1 diff
(99.8 %id)
AI168445 pooled .k 5005 to 5362 355 to 1       355/355
(100 %)
2 diff
(99.5 %id)
R50169 breast .k 5029 to 5363 337 to 1   fully sequenced,   337/337
(100 %)
4 diff
(98.9 %id)
BF871718 lung_tumor .k 5046 to 5310 265 to 1     Submitted on the opposite strand 265/265
(100 %)
2 diff
(99.3 %id)
R50384 breast .k 5059 to 5363 306 to 1       306/306
(100 %)
3 diff
(99.1 %id)
T15934   .k 5065 to 5359 295 to 1       295/295
(100 %)
0 diff
(100 %id)
AI750079 colon .k 5068 to 5366 300 to 2       299/300
(99 %)
0 diff
(100 %id)
AW386871 pnet .k 5072 to 5339 28 to 295       268/302
(88 %)
5 diff
(98.4 %id)
AA460277   .k 5120 to 5366 251 to 5       247/255
(96 %)
0 diff
(100 %id)
T16627   .k 5127 to 5359 233 to 1       233/233
(100 %)
0 diff
(100 %id)
AA468806 colon .k 5141 to 5364 223 to 1       223/223
(100 %)
1 diff
(99.6 %id)
AU106984   .k 5490 to 5537 1 to 48       48/50
(96 %)
2 diff
(96.0 %id)
DC362963 Liver .l 1 to 539 1 to 540 V158G tiling clone,   540/540
(100 %)
1 diff
(99.9 %id)
DB489753 hypothalamus .m 1 to 456 1 to 455 H12N E22K L25F Y39L L40P ... tiling clone,   455/457
(99 %)
22 diff
(95.2 %id)
BP231227 muscle .n 1 to 583 1 to 582 A5L L6C L7* tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
AK308812 brain .o 1 to 927 2 to 928   tiling clone,   928/928
(100 %)
0 diff
(100 %id)
DA530183 brain .o 1 to 612 3 to 614   capped   613/613
(100 %)
1 diff
(99.9 %id)
BP362505 thalamus .o 1 to 579 2 to 580       580/580
(100 %)
3 diff
(99.5 %id)
DA209605 brain .o 1 to 571 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB122146 thymus .o 29 to 302 2 to 275   capped   274/274
(100 %)
0 diff
(100 %id)
DA486207 brain .o 34 to 584 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA697987   .o 41 to 753 2 to 717 A46V W47V Y48P L49R G50P ... capped   716/803
(89 %)
15 diff
(98.2 %id)
DB323416   .o 2046 to 2531 485 to 1   tiling clone,   485/485
(100 %)
12 diff
(97.6 %id)
DA004388   .p 1 to 581 2 to 582   tiling clone, capped   581/581
(100 %)
0 diff
(100 %id)
DA734264   .p 7 to 496 2 to 493   capped   492/503
(97 %)
15 diff
(97.1 %id)
DA342476 substantia nigra .p 27 to 594 2 to 572 S96F S97Q P98S A100C *102P capped   571/571
(100 %)
5 diff
(99.2 %id)
CR597907 Neuroblastoma Cot 50-normalized .p 39 to 2315 1 to 2277   tiling clone,   2277/2277
(100 %)
0 diff
(100 %id)
AL528824 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .p 39 to 1145 1 to 1098       1098/1127
(97 %)
29 diff
(97.5 %id)
AL519512 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .p 49 to 1049 1 to 987       987/1002
(98 %)
19 diff
(98.2 %id)
AL519511 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .p 1262 to 2322 1056 to 10       1047/1071
(97 %)
0 diff
(100 %id)
AU151265   .p 1814 to 2348 534 to 1   tiling clone,   534/540
(98 %)
6 diff
(98.9 %id)
BI002976 head_normal .q 1 to 441 446 to 2 V2L D5E L6P E7G W8V ... tiling clone,   445/447
(99 %)
9 diff
(98.0 %id)
AK122636 testis .r 1 to 1974 2 to 1975 exact tiling clone, available from FLJ,   1975/1975
(100 %)
3 diff
(99.9 %id)
DB052525 testis .r 1 to 564 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
T27215   .r 272 to 486 1 to 218       218/325
(67 %)
4 diff
(98.8 %id)
Z70275   .r 298 to 678 1 to 381       381/381
(100 %)
0 diff
(100 %id)
BG987161 head_neck .r 820 to 1117 7 to 303       297/313
(94 %)
28 diff
(91.1 %id)
CK001114 brain/CNS, Bulk tissue from Human Spinal cord .r 972 to 1641 1 to 668       668/668
(100 %)
9 diff
(98.7 %id)
DA369199 subthalamic nucleus .r 1122 to 1679 2 to 559   tiling clone, capped   558/558
(100 %)
2 diff
(99.7 %id)
BX328994 Neuroblastoma Cot 50-normalized .r 1346 to 1957 612 to 1       612/1018
(60 %)
21 diff
(98.0 %id)
BM745211 stomach .r 1372 to 1896 1 to 525   tiling clone,   525/525
(100 %)
0 diff
(100 %id)
BF841350 head_neck .r 1411 to 1603 1 to 193       193/193
(100 %)
4 diff
(98.0 %id)
BM703092 eye, human retina .r 1449 to 1925 1 to 477       477/477
(100 %)
3 diff
(99.4 %id)
DB338669 testis .r 1467 to 1974 508 to 1       508/508
(100 %)
1 diff
(99.9 %id)
BF328854 breast_normal .r 1491 to 1743 5 to 256       252/272
(92 %)
20 diff
(92.7 %id)
AK311269 thalamus .s 1 to 912 1 to 912 exact tiling clone,   912/912
(100 %)
0 diff
(100 %id)
DA407424 thalamus .s 2 to 561 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA378515 thalamus .t-u 1 to 516 2 to 516 V52X tiling clone, capped   515/515
(100 %)
0 diff
(100 %id)
CD014139   Gene SPEM1andFGF11andCHRNB1, variant not shown         Suspected internal deletion, this clone was ignored    
BM680320 eye, fetal eye Gene SPEM1andFGF11andCHRNB1, variant not shown       fully sequenced, AAA Suspected internal deletion, this clone was ignored    
BM724147 eye, fetal eye Gene SPEM1andFGF11andCHRNB1, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
BM679704 eye, fetal eye Gene SPEM1andFGF11andCHRNB1, variant not shown       fully sequenced, AAA Suspected internal deletion, this clone was ignored    
BM724475 eye, fetal eye Gene SPEM1andFGF11andCHRNB1, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
DA017950 adrenal gland Gene SPEM1andFGF11andCHRNB1, variant not shown       capped This clone was ignored    
F03722 brain, total brain Gene SPEM1andFGF11andCHRNB1, variant not shown         Suspected internal deletion, this clone was ignored    
Z44732 brain, total brain Gene SPEM1andFGF11andCHRNB1, variant not shown         Suspected internal deletion, this clone was ignored    
CN398842 embryonic stem cells, DMSO-treated H9 cellline Gene SPEM1andFGF11andCHRNB1, variant not shown         This clone was ignored    
AK097400 testis Gene SPEM1andFGF11andCHRNB1, variant not shown       available from FLJ, This clone was ignored    
AK308477 adrenal gland Gene SPEM1andFGF11andCHRNB1, variant not shown         This clone was ignored    
DB261391 uterus Gene SPEM1andFGF11andCHRNB1, variant not shown       capped Suspected internal deletion, this clone was ignored    
AW468910 pooled Gene SPEM1andFGF11andCHRNB1, variant not shown              
BG056203 brain, glioblastoma with probably TP53 mutation andwithout EGFR amplification Gene SPEM1andFGF11andCHRNB1, variant not shown         This clone was ignored    
BG708889 brain, hypothalamus Gene SPEM1andFGF11andCHRNB1, variant not shown         Suspected internal deletion, this clone was ignored    
DB021296 testis Gene SPEM1andFGF11andCHRNB1, variant not shown       capped      
DB335922 testis Gene SPEM1andFGF11andCHRNB1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI