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Gene CHRNA10TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
49 supporting clones for gene CHRNA10 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
TI_2016724827   CHRNA10.a 1 to 1108 62 to 1164     Submitted on the opposite strand 1103/1248
(88 %)
22 diff
(98.3 %id)
BC136250 Liver, PCR rescued clones CHRNA10.a 1 to 1474 1 to 1474 exact tiling clone,   1474/1474
(100 %)
0 diff
(100 %id)
TI_2016731141   CHRNA10.a 939 to 1476 28 to 565       538/756
(71 %)
6 diff
(99.3 %id)
BF343450 brain, glioblastoma with EGFR amplification CHRNA10.a 1035 to 1719 1 to 683       683/683
(100 %)
4 diff
(99.5 %id)
AI139700 heart CHRNA10.a 1208 to 1615 408 to 1       408/408
(100 %)
0 diff
(100 %id)
BQ010406 Chondrosarcoma, Left Pubic Bone CHRNA10.a 1366 to 1919 572 to 19   AAA   554/554
(100 %)
0 diff
(100 %id)
DB304313 brain CHRNA10.a 1393 to 1922 530 to 1   tiling clone,   530/530
(100 %)
0 diff
(100 %id)
AA262389 germinal center B cell CHRNA10.a 1512 to 1923 411 to 1     Submitted on the opposite strand 411/411
(100 %)
2 diff
(99.6 %id)
AW149737 brain, medulloblastoma CHRNA10.a 1788 to 1923 138 to 3   tiling clone,   136/138
(98 %)
0 diff
(100 %id)
AF199235 inner-ear vestibular neuroepithelium andtonsillar CHRNA10.b 1 to 1944 1 to 1944 exact tiling clone, AAA   1944/1944
(100 %)
2 diff
(99.9 %id)
NM_020402.2   CHRNA10.b 1 to 1944 1 to 1944 exact RefSeq, AAA   1944/1944
(100 %)
2 diff
(99.9 %id)
AJ278118 skeletal muscle CHRNA10.b 31 to 1944 1 to 1914 exact AAA   1914/1914
(100 %)
4 diff
(99.8 %id)
AJ295237   CHRNA10.b 31 to 1442 1 to 1412 exact     1412/1412
(100 %)
0 diff
(100 %id)
TI_2016730483   CHRNA10.b 292 to 1498 1256 to 55     Submitted on the opposite strand 1202/1303
(92 %)
49 diff
(96.3 %id)
TI_2016724791   CHRNA10.b 435 to 1498 1113 to 56   tiling clone, Submitted on the opposite strand 1058/1297
(81 %)
10 diff
(99.3 %id)
TI_2016730857   CHRNA10.b 500 to 1498 1051 to 55     Submitted on the opposite strand 997/1237
(80 %)
18 diff
(98.6 %id)
TI_2016730195   CHRNA10.b 596 to 1498 954 to 53     Submitted on the opposite strand 902/964
(93 %)
10 diff
(99.0 %id)
TI_2016730737   CHRNA10.b 620 to 1501 12 to 891       880/891
(98 %)
25 diff
(97.2 %id)
AI660069 thymus, pooled CHRNA10.b 624 to 1095 1 to 472     Submitted on the opposite strand 472/472
(100 %)
3 diff
(99.4 %id)
AI673104 thymus, pooled CHRNA10.b 624 to 1164 1 to 541     Submitted on the opposite strand 541/541
(100 %)
0 diff
(100 %id)
BF059093 fibrotheoma, ovary CHRNA10.b 624 to 1151 1 to 528     Submitted on the opposite strand 528/528
(100 %)
2 diff
(99.7 %id)
AA243627 germinal center B cell CHRNA10.b 627 to 806 4 to 182     Submitted on the opposite strand 179/182
(98 %)
6 diff
(96.8 %id)
TI_2016730841   CHRNA10.b 654 to 1449 807 to 11       797/808
(98 %)
7 diff
(99.2 %id)
AA937958 germinal center B cell CHRNA10.b 710 to 821 1 to 112     Submitted on the opposite strand 112/113
(99 %)
5 diff
(95.6 %id)
TI_2016730837   CHRNA10.b 754 to 1418 24 to 688       665/688
(96 %)
7 diff
(99.0 %id)
TI_2016725139   CHRNA10.b 770 to 1498 786 to 58     Submitted on the opposite strand 729/1065
(68 %)
5 diff
(99.6 %id)
BC143303 Liver, PCR rescued clones CHRNA10.c 1 to 1541 1 to 1541 exact tiling clone,   1541/1541
(100 %)
0 diff
(100 %id)
BX096928 brain, glioblastoma (pooled) CHRNA10.d-u 1 to 215 1 to 215   tiling clone,   215/217
(99 %)
1 diff
(99.6 %id)
AI939323 brain, glioblastoma (pooled) CHRNA10.d-u 139 to 641 503 to 1   tiling clone,   503/503
(100 %)
0 diff
(100 %id)
BF057531 fibrotheoma, ovary CHRNA10.d-u 145 to 605 461 to 1       461/461
(100 %)
4 diff
(99.2 %id)
AI359800 brain, glioblastoma (pooled) CHRNA10.d-u 160 to 631 473 to 2       472/473
(99 %)
0 diff
(100 %id)
AI146549 brain, glioblastoma (pooled) CHRNA10.d-u 211 to 623 413 to 1       413/413
(100 %)
0 diff
(100 %id)
AW207378   CHRNA10.d-u 260 to 640 381 to 1       381/381
(100 %)
0 diff
(100 %id)
AW135678   CHRNA10.d-u 291 to 640 350 to 1       350/350
(100 %)
0 diff
(100 %id)
BE855541 brain, glioblastoma (pooled) CHRNA10.d-u 411 to 640 230 to 1       230/230
(100 %)
1 diff
(99.6 %id)
BF516351   CHRNA10.d-u 635 to 1028 1 to 394     Submitted on the opposite strand 394/394
(100 %)
1 diff
(99.8 %id)
BF516446   CHRNA10.d-u 635 to 1150 1 to 516   tiling clone, Submitted on the opposite strand 516/516
(100 %)
0 diff
(100 %id)
BC033833 Brain, anaplastic oligodendroglioma with1p/19q loss CHRNA10.d-u 642 to 2204 1573 to 11 exact tiling clone, available from MGC, Submitted on the opposite strand 1563/1563
(100 %)
0 diff
(100 %id)
BF345692 anaplastic oligodendroglioma with 1p/19qloss, brain CHRNA10.d-u 1399 to 2202 803 to 1 L20P H21A Y22L C23L G24W ... available from MGC, Submitted on the opposite strand 803/984
(81 %)
20 diff
(98.0 %id)
CR744383 germinal center B cell CHRNA10.e 1 to 585 1 to 585 exact tiling clone,   585/585
(100 %)
2 diff
(99.7 %id)
AA491394 germinal center B cell CHRNA10.e 76 to 390 1 to 315       315/315
(100 %)
0 diff
(100 %id)
BM702479 eye, human retina CHRNA10.e 161 to 658 1 to 498   tiling clone, fully sequenced,   498/498
(100 %)
4 diff
(99.2 %id)
AA005001 liver and spleen CHRNA10.e 166 to 446 1 to 284       284/284
(100 %)
5 diff
(98.3 %id)
BQ328109 kidney_tumor CHRNA10.e 213 to 687 12 to 482       471/482
(97 %)
6 diff
(98.8 %id)
AW969149   CHRNA10.e 390 to 1002 614 to 3     Submitted on the opposite strand 612/636
(96 %)
0 diff
(100 %id)
AA004906 liver and spleen CHRNA10.e 611 to 1004 425 to 26   tiling clone,   400/433
(92 %)
0 diff
(100 %id)
BM665196 eye, human retina CHRNA10.e 628 to 971 338 to 1   tiling clone, fully sequenced,   338/338
(100 %)
5 diff
(98.6 %id)
AA699349 liver and spleen CHRNA10.e 663 to 1004 366 to 26       341/366
(93 %)
0 diff
(100 %id)
AA778225 liver and spleen CHRNA10.e 683 to 1004 346 to 26   tiling clone,   321/346
(92 %)
0 diff
(100 %id)
AW610256 stomach CHRNA10.e 707 to 982 312 to 38       275/312
(88 %)
0 diff
(100 %id)
DA209247 brain CHRNA10.f-u 1 to 571 2 to 572 exact tiling clone, capped   571/571
(100 %)
4 diff
(99.3 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C