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Gene CHRDTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
127 supporting clones for gene CHRD back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF209928 Liver .a 1 to 3521 1 to 3521 M712L tiling clone, AAA   3521/3521
(100 %)
3 diff
(100.0 %id)
NM_003741.2   .a 1 to 3521 1 to 3521 exact RefSeq, AAA   3521/3521
(100 %)
0 diff
(100 %id)
BC112345 PCR rescued clones .a 216 to 3277 1 to 3062   tiling clone,   3062/3062
(100 %)
0 diff
(100 %id)
BF303966 muscle, rhabdomyosarcoma .a 247 to 996 1 to 735       737/954
(77 %)
23 diff
(97.6 %id)
BF303823 muscle, rhabdomyosarcoma .a 247 to 857 1 to 611       611/611
(100 %)
22 diff
(96.4 %id)
BF204337 muscle, rhabdomyosarcoma .a 248 to 957 1 to 703       705/703
(100 %)
9 diff
(98.8 %id)
BF204284 muscle, rhabdomyosarcoma .a 248 to 1043 1 to 775       777/929
(83 %)
29 diff
(96.9 %id)
AK293456 cerebellum .a 279 to 3527 1 to 3249       3249/3249
(100 %)
2 diff
(100.0 %id)
DC302268 cerebellum .a 279 to 834 1 to 556       556/556
(100 %)
0 diff
(100 %id)
AA324099 brain, cerebellum .a 1006 to 1294 1 to 289       289/289
(100 %)
3 diff
(99.0 %id)
CB216920 normal endometrium, mid-secretory phase,cycle day 23, uterus .a 1060 to 1677 1 to 618       618/618
(100 %)
0 diff
(100 %id)
DA177627 amygdala .a 1160 to 1625 2 to 467   capped   466/466
(100 %)
0 diff
(100 %id)
DA311159 hippocampus .a 1188 to 1751 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
AK300476 Prostate .a 1572 to 3423 1 to 1852       1852/1852
(100 %)
2 diff
(99.9 %id)
BC029879 Brain, Lung, Testis, adult, pooled whole .a 1871 to 3527 1 to 1657   available from MGC, AAA   1657/1657
(100 %)
0 diff
(100 %id)
BI820465 pooled brain, lung, testis .a 1871 to 2660 1 to 791   available from MGC,   791/792
(99 %)
4 diff
(99.5 %id)
TI_57197776   .a 1871 to 2660 46 to 836       791/837
(94 %)
9 diff
(99.0 %id)
BI252168 hepatocellular carcinoma, cell line, Liver .a 1960 to 2672 1 to 712       712/715
(99 %)
7 diff
(99.1 %id)
AV696158 hepatocellular carcinoma .a 2313 to 2722 1 to 407       407/408
(99 %)
2 diff
(99.6 %id)
CK904519 Islets of Langerhans, Pancreas .a 2458 to 3015 1 to 558       558/558
(100 %)
0 diff
(100 %id)
BM023627 Islets of Langerhans, Pancreas .a 2474 to 2902 1 to 429       429/429
(100 %)
1 diff
(99.8 %id)
AA036834 uterus .a 2609 to 3057 1 to 465       465/502
(92 %)
23 diff
(95.5 %id)
BI252789 hepatocellular carcinoma, cell line, Liver .a 2809 to 3445 650 to 1       650/778
(83 %)
21 diff
(97.4 %id)
DC425779 cerebellum .a 2968 to 3527 560 to 1       560/560
(100 %)
0 diff
(100 %id)
AY358926   .b 1 to 3391 18 to 3408 L2G P4X P17A E109Q tiling clone, AAA   3391/3408
(99 %)
7 diff
(99.8 %id)
AV647036 corresponding non cancerous liver tissue .b 2892 to 3305 1 to 414     Submitted on the opposite strand 414/414
(100 %)
0 diff
(100 %id)
DC310918 cerebellum .c 1 to 568 1 to 569   tiling clone,   569/569
(100 %)
1 diff
(99.9 %id)
DC310426 cerebellum .c 22 to 563 1 to 543   tiling clone,   543/543
(100 %)
1 diff
(99.9 %id)
AF076612   .c 269 to 3076 7 to 2813   tiling clone, AAA   2807/2813
(99 %)
13 diff
(99.6 %id)
AF283325   .d 1 to 3492 1 to 3492 A159S tiling clone, AAA   3492/3492
(100 %)
3 diff
(100.0 %id)
AF209930   .e 1 to 3547 1 to 3547 A159S tiling clone, AAA   3547/3547
(100 %)
3 diff
(100.0 %id)
DA118067 cerebellum .f 1 to 548 2 to 549   tiling clone, capped   548/548
(100 %)
0 diff
(100 %id)
AK300213 placenta .f 115 to 2650 1 to 2536 exact tiling clone,   2536/2536
(100 %)
0 diff
(100 %id)
DC380891 placenta .f 115 to 665 1 to 552       552/552
(100 %)
1 diff
(99.9 %id)
DA178078 amygdala .f 199 to 682 90 to 575   capped   486/574
(84 %)
7 diff
(98.8 %id)
DC426454 placenta .f 2167 to 2713 547 to 1   tiling clone,   547/547
(100 %)
0 diff
(100 %id)
AK074147 Spleen .g 1 to 4234 1 to 4240 exact tiling clone, available from FLJ,   4240/4240
(100 %)
4 diff
(100.0 %id)
DB472262 hippocampus .g 22 to 502 1 to 481       481/481
(100 %)
9 diff
(98.2 %id)
BE300390 muscle, rhabdomyosarcoma .g 25 to 806 47 to 860       807/860
(93 %)
111 diff
(87.1 %id)
DA116250 cerebellum .g 27 to 607 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DC423137 uterus .g 27 to 543 1 to 517       517/517
(100 %)
2 diff
(99.7 %id)
DA094258 cerebellum .g 29 to 543 2 to 516   capped   515/515
(100 %)
0 diff
(100 %id)
DA211706 brain .g 29 to 585 2 to 558   capped   557/557
(100 %)
3 diff
(99.5 %id)
DA309302 hippocampus .g 29 to 509 2 to 482   capped   481/485
(99 %)
2 diff
(99.6 %id)
DA316278 hippocampus .g 29 to 514 2 to 487   capped   486/486
(100 %)
1 diff
(99.8 %id)
DC308377 cerebellum .g 30 to 578 1 to 549       549/549
(100 %)
5 diff
(99.1 %id)
DC320974 brain .g 30 to 480 1 to 451       451/451
(100 %)
4 diff
(99.2 %id)
DC306385 cerebellum .g 31 to 595 1 to 565       565/565
(100 %)
3 diff
(99.5 %id)
DA103804 cerebellum .g 35 to 581 2 to 548   capped   547/548
(99 %)
1 diff
(99.9 %id)
DA118007 cerebellum .g 37 to 580 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DC307631 cerebellum .g 38 to 574 1 to 538       538/538
(100 %)
2 diff
(99.7 %id)
BI828909 brain, medulla .g 38 to 877 1 to 845       850/846
(100 %)
22 diff
(97.4 %id)
TI_57172724   .g 38 to 877 30 to 874       850/875
(97 %)
26 diff
(97.1 %id)
DA091901 cerebellum .g 39 to 600 2 to 570   capped   569/569
(100 %)
9 diff
(98.5 %id)
DA121251 cerebellum .g 39 to 588 2 to 551   capped   550/551
(99 %)
1 diff
(99.9 %id)
DB284112 uterus .g 39 to 589 2 to 552   capped   551/551
(100 %)
3 diff
(99.5 %id)
DA336764 hippocampus .g 40 to 618 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DC309855 cerebellum .g 43 to 543 1 to 502       502/502
(100 %)
2 diff
(99.7 %id)
DC305331 cerebellum .g 44 to 585 1 to 543       543/543
(100 %)
2 diff
(99.7 %id)
DA099031 cerebellum .g 44 to 543 2 to 501   capped   500/500
(100 %)
0 diff
(100 %id)
DA093694 cerebellum .g 47 to 536 2 to 493   capped   492/492
(100 %)
2 diff
(99.6 %id)
DA115311 cerebellum .g 47 to 591 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA116926 cerebellum .g 47 to 591 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
DA101130 cerebellum .g 52 to 625 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
DA092839 cerebellum .g 53 to 536 2 to 485   capped   484/484
(100 %)
0 diff
(100 %id)
DA119928 cerebellum .g 53 to 609 2 to 558   capped   557/557
(100 %)
3 diff
(99.5 %id)
BU149691 dorsal root ganglia .g 92 to 921 1 to 833       833/956
(87 %)
15 diff
(98.5 %id)
DA191762 amygdala .g 109 to 711 2 to 604   capped   603/603
(100 %)
1 diff
(99.9 %id)
DA314031 hippocampus .g 114 to 633 2 to 521   capped   520/520
(100 %)
1 diff
(99.9 %id)
AK296316 thalamus .g 154 to 1452 1 to 1299       1299/1299
(100 %)
1 diff
(100.0 %id)
DC342227 thalamus .g 154 to 726 1 to 573       573/573
(100 %)
0 diff
(100 %id)
BM047249 carcinoma, cell line, Prostate .g 310 to 968 1 to 652       652/652
(100 %)
10 diff
(98.5 %id)
DA621692 Kidney .g 847 to 1390 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA964604 stomach .g 922 to 1480 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA343201 substantia nigra .g 938 to 1530 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA058888 cerebellum .g 940 to 1475 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
AI906751 breast .g 999 to 1346 347 to 1       347/348
(99 %)
4 diff
(98.9 %id)
DA072545 cerebellum .g 1114 to 1679 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
CB269411 adipose .g 1245 to 1652 1 to 407       405/407
(99 %)
6 diff
(98.6 %id)
DA513387 brain .g 1328 to 1887 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA386942 thalamus .g 1346 to 1909 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
Z45388 brain, total brain .g 1364 to 1623 1 to 260       260/260
(100 %)
7 diff
(97.4 %id)
DC303118 cerebellum .g 1454 to 2029 1 to 577       577/577
(100 %)
2 diff
(99.7 %id)
DC382770 Prostate .g 1482 to 2016 1 to 535       535/535
(100 %)
0 diff
(100 %id)
CF552280 Pooled muscle (cardiac and skeletal) .g 1486 to 2152 1 to 667       667/677
(98 %)
5 diff
(99.3 %id)
CF552260 Pooled muscle (cardiac and skeletal) .g 1486 to 2226 28 to 776       749/931
(80 %)
30 diff
(96.8 %id)
BM547128 brain, hippocampus .g 1561 to 2156 19 to 615       597/619
(96 %)
13 diff
(97.9 %id)
BQ776386 Pancreas, Purified pancreatic islet .g 1716 to 2133 1 to 418       418/418
(100 %)
0 diff
(100 %id)
BX280220 pooled brain, lung, testis .g 1781 to 2255 14 to 488       475/488
(97 %)
6 diff
(98.8 %id)
AF038198 brain .g 1807 to 3327 1 to 1521   AAA   1521/1521
(100 %)
2 diff
(99.9 %id)
T77212 whole brain .g 1822 to 2068 1 to 248       248/251
(98 %)
5 diff
(98.1 %id)
BE872081 adenocarcinoma, colon .g 2011 to 2224 1 to 214       214/214
(100 %)
0 diff
(100 %id)
DA070840 cerebellum .g 2110 to 2673 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BF960565 nervous_normal .g 2698 to 3020 329 to 8       322/331
(97 %)
2 diff
(99.4 %id)
BM023317 Islets of Langerhans, Pancreas .g 2761 to 3323 575 to 13   AAA   563/568
(99 %)
1 diff
(99.9 %id)
AA326404 brain, cerebellum .g 2764 to 3083 1 to 322       322/322
(100 %)
6 diff
(98.2 %id)
BE465482 Kidney .g 2768 to 3327 564 to 6       559/564
(99 %)
0 diff
(100 %id)
CK904518 Islets of Langerhans, Pancreas .g 2780 to 3323 556 to 13   AAA   544/544
(100 %)
3 diff
(99.5 %id)
DC426485 Prostate .g 2836 to 3327 492 to 1       492/492
(100 %)
0 diff
(100 %id)
BE670920 carcinoid, lung .g 2856 to 3304 1 to 449     Submitted on the opposite strand 449/449
(100 %)
5 diff
(98.9 %id)
AA036779 uterus .g 2868 to 3323 460 to 1       460/504
(91 %)
6 diff
(98.9 %id)
AI370796   .g 2885 to 3327 454 to 12   AAA   443/443
(100 %)
0 diff
(100 %id)
D50984   .g 2901 to 3326 419 to 1       419/419
(100 %)
20 diff
(95.3 %id)
AW008259 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .g 2949 to 3324 377 to 1       377/377
(100 %)
2 diff
(99.5 %id)
BQ778474 Pancreas, Purified pancreatic islet .g 3064 to 3326 263 to 1       263/263
(100 %)
0 diff
(100 %id)
AI648461 ovary, tumor, 5 pooled (see description) .g 3113 to 3327 221 to 7       215/221
(97 %)
0 diff
(100 %id)
Z41391 brain, total brain .g 3143 to 3327 185 to 1       185/185
(100 %)
0 diff
(100 %id)
AB208947 Spleen .h 1 to 4492 1 to 4493 exact tiling clone,   4493/4493
(100 %)
4 diff
(100.0 %id)
AK295632 hippocampus .h 134 to 1187 1 to 1054   tiling clone,   1054/1054
(100 %)
0 diff
(100 %id)
DA102492 cerebellum .h 193 to 784 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA066406 cerebellum .h 351 to 911 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA455184 tongue, tumor tissue .h 478 to 1051 2 to 576   capped   575/575
(100 %)
3 diff
(99.5 %id)
DA054213 cerebellum .h 733 to 1267 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DA113679 cerebellum .h 960 to 1510 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
AF209929   .i 1 to 1252 1 to 1252   tiling clone,   1252/1252
(100 %)
1 diff
(100.0 %id)
DC383220 Prostate .i 911 to 1437 1 to 527   tiling clone,   527/527
(100 %)
0 diff
(100 %id)
BQ006677 Chondrosarcoma, Left Pelvis .j 1 to 717 736 to 16 S2V P17X F22X F40X tiling clone, AAA   718/719
(99 %)
5 diff
(99.4 %id)
AL134738 brain .k 1 to 734 1 to 740 E148* tiling clone,   740/742
(99 %)
10 diff
(98.7 %id)
DA392418 thalamus .l 1 to 595 2 to 596   tiling clone, capped   595/595
(100 %)
1 diff
(99.9 %id)
DA408210 thalamus .l 144 to 676 2 to 534   tiling clone, capped   533/533
(100 %)
1 diff
(99.9 %id)
BC114923 PCR rescued clones .m 1 to 1344 1348 to 5 W162* tiling clone, Submitted on the opposite strand 1344/1353
(99 %)
2 diff
(99.9 %id)
DA332608 hippocampus .n 1 to 588 2 to 589   tiling clone, capped   588/588
(100 %)
2 diff
(99.7 %id)
DA336666 hippocampus .n 28 to 607 2 to 581 exact tiling clone, capped   580/580
(100 %)
1 diff
(99.9 %id)
DA092462 cerebellum .n 36 to 532 2 to 498   capped   497/497
(100 %)
1 diff
(99.8 %id)
DA106058 cerebellum .o 1 to 545 2 to 546 exact tiling clone, capped   545/545
(100 %)
0 diff
(100 %id)
DA226261 brain .p 1 to 502 2 to 503 exact tiling clone, capped   502/502
(100 %)
2 diff
(99.7 %id)
DA085578 cerebellum .q 1 to 587 2 to 589 exact tiling clone, capped   588/588
(100 %)
1 diff
(99.9 %id)
DA104915 cerebellum .r-u 1 to 573 2 to 575 Y25L R26* tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
DA105067 cerebellum .s 1 to 559 2 to 560 exact tiling clone, capped   559/559
(100 %)
0 diff
(100 %id)
DA096654 cerebellum Gene CHRD, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB298894 cerebellum Gene CHRD, variant not shown         Suspected internal deletion, this clone was ignored    
DA098196 cerebellum Gene CHRD, variant not shown       capped Suspected internal deletion, this clone was ignored    
DA381204 thalamus Gene CHRD, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r-u, .s Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI