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Gene CHORDC1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
380 supporting clones for gene CHORDC1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK290231 thalamus .a 1 to 1641 2 to 1642 exact tiling clone,   1642/1642
(100 %)
1 diff
(100.0 %id)
NM_012124.2   .a 1 to 3381 2 to 3382 exact RefSeq, AAA   3382/3382
(100 %)
0 diff
(100 %id)
DA417105 thalamus .a 1 to 566 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA860721 placenta .a 98 to 578 2 to 482   capped   481/481
(100 %)
3 diff
(99.4 %id)
BP193100 brain .a 253 to 831 1 to 581       581/581
(100 %)
6 diff
(99.0 %id)
CX758187 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 261 to 1017 42 to 796     Submitted on the opposite strand 758/797
(95 %)
20 diff
(97.5 %id)
BI549666 brain, hippocampus .a 267 to 1071 1 to 811       811/814
(99 %)
13 diff
(98.5 %id)
BI552736 brain, hippocampus .a 267 to 1066 1 to 815       793/822
(96 %)
54 diff
(93.5 %id)
TI_44170786   .a 267 to 1066 123 to 937       815/944
(86 %)
46 diff
(95.2 %id)
TI_44170873   .a 267 to 1071 127 to 937       811/940
(86 %)
15 diff
(98.5 %id)
BG699839 brain, hippocampus .a 268 to 833 1 to 575       573/661
(86 %)
20 diff
(97.0 %id)
DA372712 thalamus .a 270 to 828 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA390682 thalamus .a 272 to 856 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
AL711225 human skeletal muscle .a 274 to 844 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
DA043946 bladder .a 281 to 853 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB241641 stomach, tumor tissue .a 282 to 827 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DB015524 esophageal, tumor tissue .a 284 to 820 2 to 538   capped   537/537
(100 %)
3 diff
(99.5 %id)
BP248291 Kidney .a 287 to 868 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA033099   .a 288 to 863 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA680489 ovary .a 288 to 827 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA133864 alzheimer cortex .a 289 to 832 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
CN356233 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 289 to 811 8 to 530       523/530
(98 %)
1 diff
(99.9 %id)
DA666435   .a 291 to 854 2 to 566   capped   565/565
(100 %)
6 diff
(99.0 %id)
AL709795 human skeletal muscle .a 292 to 850 1 to 559       559/559
(100 %)
2 diff
(99.7 %id)
BP243636 Liver .a 293 to 863 1 to 571       571/571
(100 %)
3 diff
(99.5 %id)
BG699946 brain, hippocampus .a 293 to 944 1 to 662       655/662
(98 %)
16 diff
(97.6 %id)
BP291945 lung .a 293 to 848 1 to 560       560/572
(97 %)
17 diff
(97.1 %id)
AV762929 bone marrow .a 293 to 723 1 to 428       428/431
(99 %)
3 diff
(99.4 %id)
BP337548 coronary artery .a 293 to 874 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA264836 caudate nucleus .a 294 to 859 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA273925 corpus callosum .a 294 to 857 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA358418 subthalamic nucleus .a 294 to 853 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA426510 colon .a 294 to 854 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA817025   .a 294 to 868 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA902791   .a 295 to 857 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA420103 cord Blood .a 296 to 874 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
CD691649 normal nasopharynx .a 296 to 906 32 to 642       611/642
(95 %)
6 diff
(99.1 %id)
DA159819 amygdala .a 297 to 782 2 to 487   capped   486/486
(100 %)
0 diff
(100 %id)
DA392410 thalamus .a 297 to 894 2 to 599   capped   598/598
(100 %)
1 diff
(99.9 %id)
DB074466 testis .a 297 to 842 2 to 547   capped   546/547
(99 %)
1 diff
(99.9 %id)
DB074515 testis .a 297 to 850 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
AK225365 Liver .a 298 to 2364 1 to 2067 R305G A329D AAA   2067/2067
(100 %)
3 diff
(99.9 %id)
DA393841 thalamus .a 298 to 890 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
BP241946 Liver .a 298 to 881 1 to 584       584/584
(100 %)
3 diff
(99.5 %id)
BP241962 Liver .a 298 to 874 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
DA350374 substantia nigra .a 299 to 802 2 to 506   capped   505/505
(100 %)
2 diff
(99.7 %id)
DB057247 testis .a 299 to 837 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
BE906737 epithelioid carcinoma, Pancreas .a 300 to 982 1 to 681       681/739
(92 %)
8 diff
(99.0 %id)
AV706208 adrenal gland .a 302 to 1044 1 to 740       740/740
(100 %)
13 diff
(98.3 %id)
BI913044 brain .a 303 to 1000 1 to 701       701/701
(100 %)
9 diff
(98.8 %id)
TI_57176015   .a 303 to 1120 64 to 881       818/882
(92 %)
9 diff
(99.0 %id)
TI_57240919   .a 303 to 1000 33 to 733       701/733
(95 %)
6 diff
(99.2 %id)
DR002042 fetal brain .a 303 to 1028 8 to 732       725/732
(99 %)
9 diff
(98.8 %id)
CX869129 embryonic stem .a 305 to 1164 1 to 860       860/860
(100 %)
0 diff
(100 %id)
DA718258   .a 305 to 869 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
BI829279 brain, medulla .a 307 to 1120 1 to 814       814/815
(99 %)
3 diff
(99.7 %id)
AA313823 colon .a 309 to 830 1 to 520       520/520
(100 %)
2 diff
(99.7 %id)
BU181002 embryonal carcinoma, cell line, testis .a 310 to 1162 1 to 851       851/852
(99 %)
12 diff
(98.6 %id)
DB196519 trachea .a 310 to 782 13 to 485   capped   473/473
(100 %)
0 diff
(100 %id)
BX499339 Liver .a 312 to 760 1 to 450       450/450
(100 %)
8 diff
(98.3 %id)
BP248657 Kidney .a 312 to 892 1 to 581       581/583
(99 %)
3 diff
(99.5 %id)
DA019687   .a 313 to 887 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
BX498984 Liver .a 313 to 848 1 to 536       536/537
(99 %)
9 diff
(98.4 %id)
DA905754   .a 313 to 889 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
AL599069   .a 314 to 591 1 to 278       278/293
(94 %)
7 diff
(97.7 %id)
BX646165   .a 314 to 540 1 to 227       227/228
(99 %)
2 diff
(99.2 %id)
BG506795 lung .a 314 to 973 1 to 663       663/670
(98 %)
19 diff
(97.2 %id)
DA746129   .a 314 to 866 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA819568   .a 314 to 871 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
BM149492 leukopheresis .a 314 to 803 1 to 490       490/490
(100 %)
4 diff
(99.2 %id)
BP192747 brain .a 315 to 896 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
AK225565 lung .a 315 to 2119 1 to 1805 A329D     1805/1805
(100 %)
2 diff
(99.9 %id)
AK312663   .a 315 to 1408 1 to 1094 A329D     1094/1094
(100 %)
1 diff
(100.0 %id)
DB467844 hippocampus .a 315 to 778 1 to 464       464/464
(100 %)
0 diff
(100 %id)
DB478968 hippocampus .a 315 to 735 1 to 421       421/434
(97 %)
5 diff
(98.9 %id)
DB502185 hypothalamus .a 315 to 782 1 to 468       468/468
(100 %)
2 diff
(99.6 %id)
BJ991096 hepatoblastoma .a 315 to 899 1 to 585       585/585
(100 %)
0 diff
(100 %id)
BP248257 Kidney .a 315 to 896 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP248704 Kidney .a 315 to 896 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BP258678 heart .a 315 to 884 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
DA597545   .a 315 to 869 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BI915678 brain .a 315 to 618 1 to 307       307/572
(53 %)
8 diff
(98.7 %id)
BP272913   .a 315 to 878 1 to 565       565/565
(100 %)
6 diff
(99.0 %id)
BP291657 lung .a 315 to 901 1 to 587       587/588
(99 %)
2 diff
(99.7 %id)
BP294815   .a 315 to 915 1 to 601       601/601
(100 %)
1 diff
(99.9 %id)
BP319966 placenta .a 315 to 897 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP353568   .a 315 to 894 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BP355641   .a 315 to 901 1 to 586       586/586
(100 %)
15 diff
(97.5 %id)
BM147350 leukopheresis .a 315 to 818 1 to 504       504/504
(100 %)
1 diff
(99.9 %id)
DB171811 kidney, tumor tissue .a 315 to 901 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA145227 amygdala .a 316 to 892 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA172018 amygdala .a 316 to 886 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA172615 amygdala .a 316 to 862 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA251728 caudate nucleus .a 316 to 891 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA258563 caudate nucleus .a 316 to 875 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA277654 corpus callosum .a 316 to 890 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA444604 tongue, tumor tissue .a 316 to 883 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA477073   .a 316 to 884 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA607856   .a 316 to 925 2 to 611   capped   610/610
(100 %)
0 diff
(100 %id)
DA664709   .a 316 to 855 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA762295 tongue .a 316 to 894 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA823222 pericardium .a 316 to 876 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA827461 pericardium .a 316 to 877 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA882959   .a 316 to 880 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB013610 esophageal, tumor tissue .a 316 to 782 2 to 468   capped   467/467
(100 %)
0 diff
(100 %id)
DB111467 thymus .a 316 to 891 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
DB184453 liver, tumor tissue .a 316 to 883 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB198769 trachea .a 316 to 893 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DB227347 trachea .a 316 to 894 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BM457418 embryonal carcinoma, cell line, testis .a 317 to 1086 1 to 770       770/1085
(70 %)
16 diff
(98.6 %id)
BG779678 adenocarcinoma, Prostate .a 318 to 1053 1 to 734       666/735
(90 %)
28 diff
(96.2 %id)
CN356231 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 319 to 1098 9 to 789       781/790
(98 %)
7 diff
(99.2 %id)
BM834924 stomach .a 319 to 817 1 to 499       499/499
(100 %)
0 diff
(100 %id)
BM833573 stomach .a 319 to 788 1 to 471       471/471
(100 %)
1 diff
(99.8 %id)
BM833855 stomach .a 319 to 906 1 to 588       588/590
(99 %)
6 diff
(99.0 %id)
DA171598 amygdala .a 320 to 891 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
CR623645 B cells (Ramos cell line) Cot 25-normalized .a 320 to 2072 1 to 1753 exact     1753/1753
(100 %)
0 diff
(100 %id)
BX342623   .a 320 to 1263 1 to 943       943/943
(100 %)
2 diff
(99.8 %id)
DA534069 brain .a 320 to 887 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA567741   .a 320 to 868 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA618363   .a 320 to 908 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA618776   .a 320 to 893 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA905356   .a 320 to 856 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA956726 Spleen .a 320 to 860 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
BP350524   .a 320 to 901 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BF247200 hypernephroma, Kidney .a 321 to 804 1 to 482       482/482
(100 %)
29 diff
(94.0 %id)
BF679298 Prostate .a 321 to 972 1 to 652       649/873
(74 %)
19 diff
(97.9 %id)
BG505178 embryonal carcinoma, testis .a 321 to 1135 1 to 825       825/826
(99 %)
24 diff
(97.1 %id)
BP232848 muscle .a 322 to 901 1 to 581       581/582
(99 %)
1 diff
(99.9 %id)
CB990206 Human Placenta, placenta .a 322 to 973 28 to 684       657/796
(82 %)
13 diff
(98.4 %id)
DA134349 alzheimer cortex .a 323 to 874 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA153318 amygdala .a 323 to 893 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA295768 hippocampus .a 323 to 886 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
DA368298 subthalamic nucleus .a 323 to 893 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA637568 Liver .a 323 to 884 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA814179   .a 323 to 887 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA902582   .a 323 to 879 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
BE896472 melanotic melanoma, skin .a 324 to 1079 1 to 750       750/835
(89 %)
16 diff
(98.1 %id)
BM508885 insulinoma, Pancreas .a 325 to 885 8 to 568       561/569
(98 %)
7 diff
(98.8 %id)
CR613194 Neuroblastoma Cot 50-normalized .a 325 to 1722 1 to 1398 exact     1398/1398
(100 %)
0 diff
(100 %id)
CK905317 insulinoma, Pancreas .a 325 to 809 8 to 492       485/492
(98 %)
6 diff
(98.8 %id)
BU075781 insulinoma, Pancreas .a 325 to 904 8 to 587       580/587
(98 %)
6 diff
(99.0 %id)
BU948349 insulinoma, Pancreas .a 325 to 912 8 to 595       588/596
(98 %)
8 diff
(98.7 %id)
AA333125 Embryo, 8 weeks .a 326 to 601 1 to 276       276/276
(100 %)
1 diff
(99.7 %id)
AA333321 Embryo, 8 weeks .a 326 to 570 1 to 251       249/251
(99 %)
5 diff
(98.1 %id)
AF192466   .a 326 to 2364 1 to 2039 W234L H267I A329D AAA   2039/2039
(100 %)
5 diff
(99.8 %id)
BX395353 Neuroblastoma Cot 50-normalized .a 326 to 932 1 to 607   fully sequenced,   607/607
(100 %)
8 diff
(98.7 %id)
DB140424 thymus .a 328 to 886 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
AA311950   .a 334 to 764 1 to 431       431/431
(100 %)
0 diff
(100 %id)
CB044965.
matches multiple genes
colon, juvenile granulosa tumor .a 334 to 994 11 to 671     also hits gene sharmubu 661/671
(98 %)
6 diff
(99.2 %id)
CR604269 T cells (Jurkat cell line) .a 335 to 1981 1 to 1647 exact     1647/1647
(100 %)
0 diff
(100 %id)
BX421616 T cells (Jurkat cell line) .a 335 to 1390 1 to 1049   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1049/1049
(100 %)
10 diff
(99.1 %id)
BX450077 T cells (Jurkat cell line) .a 335 to 1312 1 to 976       976/976
(100 %)
8 diff
(99.2 %id)
BF981373 duodenal adenocarcinoma, cell line, small intestine .a 335 to 1072 1 to 742       742/986
(75 %)
29 diff
(97.1 %id)
BM806051 brain, hippocampus .a 335 to 1260 16 to 948       933/1066
(87 %)
24 diff
(97.8 %id)
CX762334 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 335 to 972 1 to 637       637/847
(75 %)
10 diff
(98.9 %id)
BX443493 T cells (Jurkat cell line) .a 336 to 1373 1 to 1030       1030/1030
(100 %)
11 diff
(99.0 %id)
BM926791 brain .a 336 to 1072 1 to 748   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 748/1188
(62 %)
27 diff
(97.8 %id)
EB388837 eye, optic nerve .a 336 to 1157 8 to 829       822/829
(99 %)
8 diff
(99.1 %id)
BE891850 melanotic melanoma, skin .a 342 to 971 1 to 634       634/951
(66 %)
16 diff
(98.4 %id)
DA367370 subthalamic nucleus .a 345 to 896 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
CN356235 embryonic stem cells, DMSO-treated H9 cellline .a 345 to 649 1 to 305       305/305
(100 %)
1 diff
(99.7 %id)
BM552029 leiomyosarcoma, uterus .a 347 to 1262 11 to 926       916/1024
(89 %)
15 diff
(98.6 %id)
CX781983 human embryonic stem cells .a 347 to 1224 19 to 896       878/896
(97 %)
8 diff
(99.2 %id)
AA382946 testis .a 348 to 659 1 to 314       314/314
(100 %)
3 diff
(99.1 %id)
BP248199 Kidney .a 349 to 930 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
AA355517   .a 351 to 589 1 to 240       240/240
(100 %)
1 diff
(99.6 %id)
BC072461 Uterus, leiomyosarcoma .a 351 to 2364 1 to 2014 exact tiling clone, available from MGC, AAA   2014/2014
(100 %)
0 diff
(100 %id)
BG390283 embryonal carcinoma, cell line, testis .a 351 to 1082 1 to 729       729/731
(99 %)
7 diff
(99.1 %id)
BI963949 Islets of Langerhans, Pancreas .a 352 to 940 1 to 589       589/589
(100 %)
0 diff
(100 %id)
BQ959658 leiomyosarcoma, uterus .a 352 to 1209 1 to 858       858/858
(100 %)
5 diff
(99.5 %id)
AW247666 lung, small cell carcinoma .a 353 to 671 17 to 335   available from MGC,   319/335
(95 %)
9 diff
(97.4 %id)
BC002339 Lung, small cell carcinoma .a 353 to 2797 1 to 2446 V227S V228C P229S C230M R231* tiling clone, available from MGC, AAA   2446/2446
(100 %)
2 diff
(100.0 %id)
DR156478 human embryonic stem cells differentiated toan early endodermal cell type .a 353 to 1220 1 to 868       868/868
(100 %)
0 diff
(100 %id)
BE265691 lung, small cell carcinoma .a 354 to 879 1 to 525       525/525
(100 %)
1 diff
(99.9 %id)
BE790633 lung, small cell carcinoma .a 354 to 1193 1 to 826       826/990
(83 %)
32 diff
(96.8 %id)
BQ214961 embryonal carcinoma, cell line, testis .a 354 to 1155 1 to 811       811/928
(87 %)
15 diff
(98.4 %id)
BE264007 lung, small cell carcinoma .a 355 to 882 1 to 530       530/532
(99 %)
8 diff
(98.5 %id)
BE883876 leiomyosarcoma, uterus .a 358 to 988 1 to 637       637/638
(99 %)
12 diff
(98.2 %id)
CN356234 embryonic stem cells, cell lines H1, H7, andH9 .a 359 to 848 1 to 490       490/490
(100 %)
0 diff
(100 %id)
BF219691 lung, small cell carcinoma .a 372 to 901 1 to 530   available from MGC,   530/530
(100 %)
1 diff
(99.9 %id)
AA385686 thyroid gland .a 399 to 738 1 to 342       342/347
(98 %)
4 diff
(98.9 %id)
EL736727 mixed .a 410 to 1039 1 to 628       628/628
(100 %)
2 diff
(99.7 %id)
TI_1948232174   .a 410 to 1404 136 to 1136       1001/1262
(79 %)
33 diff
(97.4 %id)
TI_1948232175   .a 410 to 1086 131 to 810       680/1168
(58 %)
15 diff
(98.8 %id)
TI_1948232472   .a 410 to 1202 133 to 930       798/1406
(56 %)
18 diff
(98.8 %id)
TI_1948232473   .a 410 to 1129 130 to 858   AAA   727/1200
(60 %)
25 diff
(98.0 %id)
TI_1948232767   .a 410 to 1259 137 to 986       850/1317
(64 %)
16 diff
(98.8 %id)
TI_1948232177   .a 517 to 1407 1029 to 131       899/1283
(70 %)
15 diff
(98.9 %id)
TI_1948232769   .a 522 to 1407 1007 to 126       882/1293
(68 %)
22 diff
(98.3 %id)
DA571444 whole embryo, mainly head .a 544 to 1372 2 to 828   capped   827/834
(99 %)
16 diff
(98.1 %id)
BX395352 Neuroblastoma Cot 50-normalized .a 871 to 1722 852 to 1   fully sequenced,   852/852
(100 %)
8 diff
(99.1 %id)
CX869048 embryonic stem .a 1662 to 2364 730 to 28   AAA   703/703
(100 %)
2 diff
(99.8 %id)
DB358300 whole embryo, mainly head .a 1793 to 2364 573 to 1       573/573
(100 %)
18 diff
(96.9 %id)
BJ991097 hepatoblastoma .a 1804 to 2343 540 to 1       540/540
(100 %)
0 diff
(100 %id)
BI963696 Islets of Langerhans, Pancreas .a 1826 to 2364 552 to 14   AAA   539/539
(100 %)
1 diff
(99.9 %id)
CX781912 human embryonic stem cells .a 1928 to 2364 469 to 32   AAA   438/438
(100 %)
3 diff
(99.4 %id)
BU948075 insulinoma, Pancreas .a 2701 to 3354 654 to 1   tiling clone,   654/654
(100 %)
0 diff
(100 %id)
BU075586 insulinoma, Pancreas .a 2773 to 3322 550 to 1       550/550
(100 %)
0 diff
(100 %id)
CK905316 insulinoma, Pancreas .a 2887 to 3356 470 to 1       470/470
(100 %)
0 diff
(100 %id)
BX493067   .a 3131 to 3575 1 to 447       447/447
(100 %)
6 diff
(98.7 %id)
AI921423 adenocarcinoma, Pancreas .a 3237 to 3729 498 to 1   tiling clone,   498/498
(100 %)
3 diff
(99.4 %id)
DB534956 hippocampus .a 3290 to 3729 1 to 447   tiling clone, Submitted on the opposite strand 447/447
(100 %)
7 diff
(98.5 %id)
NM_001144073.1   .b 1 to 3324 2 to 3325 exact RefSeq, AAA   3325/3325
(100 %)
0 diff
(100 %id)
DW446178 Liver .b 280 to 487 11 to 218   tiling clone,   208/218
(95 %)
6 diff
(97.3 %id)
DW461913 Liver .b 296 to 400 18 to 122       105/122
(86 %)
6 diff
(95.1 %id)
AF123249 heart .b 305 to 2307 1 to 2003 A310D tiling clone,   2003/2003
(100 %)
1 diff
(100.0 %id)
BE565695 bladder, carcinoma, cell line .b 334 to 884 1 to 616       566/618
(91 %)
22 diff
(96.5 %id)
AL698578 human skeletal muscle .b 335 to 501 1 to 167       167/167
(100 %)
3 diff
(98.3 %id)
TI_1948233057   .b 517 to 1350 954 to 123       832/1320
(63 %)
20 diff
(98.5 %id)
TI_1948232474   .b 523 to 1350 956 to 125       832/1336
(62 %)
31 diff
(97.7 %id)
BG250938 adenocarcinoma, cell line, Liver .b 544 to 1206 1 to 663       663/967
(68 %)
7 diff
(99.3 %id)
BX350573   .b 558 to 1456 895 to 1       895/897
(99 %)
15 diff
(98.4 %id)
AW802706 uterus .b 561 to 916 375 to 20       356/382
(93 %)
1 diff
(99.8 %id)
BE409985 choriocarcinoma, placenta .b 562 to 1244 44 to 729       686/730
(93 %)
20 diff
(97.3 %id)
BU941528 mixed (pool of 40 RNAs) .b 582 to 1347 1 to 775       775/781
(99 %)
29 diff
(96.3 %id)
BF726078 eye, Iris .b 604 to 1063 1 to 460       460/460
(100 %)
1 diff
(99.8 %id)
BE896126 melanotic melanoma, skin .b 624 to 1414 1 to 796       796/1125
(70 %)
26 diff
(97.7 %id)
AV723828 hypothalamus .b 637 to 1060 1 to 415       415/415
(100 %)
5 diff
(98.8 %id)
BG110863 Bone, osteosarcoma, cell line .b 702 to 1362 1 to 666       666/826
(80 %)
8 diff
(99.1 %id)
BU674426 lung, Primary Lung Epithelial Cells .b 755 to 1108 48 to 401     Submitted on the opposite strand 354/398
(88 %)
6 diff
(98.5 %id)
BP338980 Spleen .b 784 to 1363 1 to 580       580/580
(100 %)
3 diff
(99.5 %id)
DA603638   .b 794 to 1289 2 to 497   capped   496/496
(100 %)
0 diff
(100 %id)
BP419620 small intestine .b 814 to 1173 1 to 360     Submitted on the opposite strand 360/360
(100 %)
0 diff
(100 %id)
TI_154093496   .b 843 to 1739 977 to 99   AAA Suspected internal deletion 879/1010
(87 %)
18 diff
(98.3 %id)
AV757394 bone marrow .b 893 to 1658 67 to 827       761/828
(91 %)
64 diff
(92.3 %id)
BF697897 brain, primitive neuroectoderm .b 913 to 1647 1 to 730   available from MGC,   730/815
(89 %)
35 diff
(95.8 %id)
BC017789 Brain, primitive neuroectodermal .b 914 to 2306 1 to 1393   tiling clone, available from MGC, AAA   1393/1393
(100 %)
0 diff
(100 %id)
DA150910 amygdala .b 920 to 1457 2 to 539   capped   538/538
(100 %)
4 diff
(99.3 %id)
BQ430876 melanotic melanoma, skin .b 925 to 1787 12 to 886       875/912
(95 %)
28 diff
(97.0 %id)
CB147762 Liver .b 948 to 1220 12 to 283       272/272
(100 %)
12 diff
(95.6 %id)
BX429414 brain, fetal brain .b 955 to 1875 1 to 917       917/924
(99 %)
34 diff
(96.4 %id)
CA307347 Alveolar Macrophage, lung .b 956 to 1732 793 to 19   AAA   775/778
(99 %)
3 diff
(99.7 %id)
BE925825 breast_normal .b 988 to 1361 1 to 374       374/376
(99 %)
4 diff
(99.0 %id)
CN356229 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1013 to 1568 8 to 563       556/563
(98 %)
3 diff
(99.5 %id)
CD518739 White Matter .b 1022 to 1603 43 to 626       584/815
(71 %)
15 diff
(98.2 %id)
CA435311 Fibrosarcoma .b 1041 to 1739 717 to 19   AAA   699/699
(100 %)
1 diff
(99.9 %id)
DA813584   .b 1042 to 1591 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
BF215292 bone marrow, from acute myelogenous leukemia .b 1043 to 1528 1 to 485       485/485
(100 %)
3 diff
(99.4 %id)
BE769146 prostate_tumor .b 1045 to 1392 350 to 2       349/350
(99 %)
3 diff
(99.2 %id)
W25502 lung .b 1067 to 1469 1 to 404       404/404
(100 %)
4 diff
(99.1 %id)
BE164732 head_neck .b 1070 to 1407 334 to 1     Submitted on the opposite strand 334/338
(98 %)
6 diff
(98.3 %id)
AA186737   .b 1108 to 1613 1 to 511       511/511
(100 %)
16 diff
(96.9 %id)
BX450767 T cells (Jurkat cell line) .b 1142 to 2004 1 to 867       867/867
(100 %)
25 diff
(97.2 %id)
BQ009682 Chondrosarcoma, Left Pubic Bone .b 1158 to 1687 548 to 19   AAA   530/530
(100 %)
5 diff
(99.1 %id)
N29194.
matches multiple genes
melanocyte .b 1171 to 1564 1 to 407     also hits gene C17orf51 407/418
(97 %)
14 diff
(96.7 %id)
AV707065 adrenal gland .b 1174 to 1913 1 to 684     Suspected internal deletion 684/685
(99 %)
13 diff
(98.2 %id)
CD654074 Embryonic Stem cells .b 1184 to 1884 12 to 712       701/718
(97 %)
12 diff
(98.4 %id)
BG461376   .b 1187 to 1712 527 to 3     Submitted on the opposite strand 525/527
(99 %)
0 diff
(100 %id)
BG460194   .b 1205 to 1712 511 to 3     Submitted on the opposite strand 509/517
(98 %)
0 diff
(100 %id)
AA773461 lung, lung carcinoma .b 1225 to 1714 489 to 1       489/489
(100 %)
2 diff
(99.6 %id)
BG619641 placenta .b 1231 to 1935 1 to 734       734/849
(86 %)
33 diff
(96.2 %id)
BX429061 T cells (Jurkat cell line) .b 1238 to 2283 1046 to 1       1046/1046
(100 %)
10 diff
(99.1 %id)
BX113859 placenta .b 1250 to 1982 1 to 734       734/734
(100 %)
1 diff
(99.9 %id)
CA454291   .b 1250 to 1967 28 to 744       717/770
(93 %)
5 diff
(99.4 %id)
AW995059 breast_normal .b 1253 to 1497 1 to 239       239/239
(100 %)
10 diff
(95.9 %id)
AA151056 uterus .b 1295 to 1643 1 to 353       353/354
(99 %)
7 diff
(98.1 %id)
AA912458 pooled germ cell tumors .b 1298 to 1739 442 to 1       442/442
(100 %)
0 diff
(100 %id)
CD676544 eye, Trabecular meshwork .b 1344 to 1974 1 to 631       631/631
(100 %)
0 diff
(100 %id)
AI243826 pooled .b 1344 to 1741 400 to 3       398/400
(99 %)
0 diff
(100 %id)
BG034870 adenocarcinoma, cell line, Liver .b 1347 to 2055 1 to 726       726/990
(73 %)
52 diff
(94.8 %id)
AW181948 pooled .b 1354 to 1741 389 to 2       388/389
(99 %)
0 diff
(100 %id)
AA738116 pooled germ cell tumors .b 1385 to 1739 355 to 1       355/355
(100 %)
0 diff
(100 %id)
BM470898 leiomyosarcoma, uterus .b 1398 to 2204 1 to 810       810/1034
(78 %)
12 diff
(98.9 %id)
BM021547 Islets of Langerhans, Pancreas .b 1403 to 1903 1 to 501       501/501
(100 %)
1 diff
(99.9 %id)
AI633070 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 1428 to 1732 305 to 1       305/305
(100 %)
0 diff
(100 %id)
BG254846 adenocarcinoma, cell line, Prostate .b 1432 to 2158 1 to 717       717/809
(88 %)
18 diff
(97.8 %id)
BG287417 bladder, transitional cell papilloma, cell line .b 1453 to 2226 1 to 769       769/948
(81 %)
40 diff
(95.8 %id)
H88442 cochlea, ear .b 1541 to 1962 1 to 422       422/427
(98 %)
25 diff
(94.2 %id)
BQ000304 Fibrosarcoma .b 1569 to 2307 757 to 19   AAA   739/739
(100 %)
1 diff
(99.9 %id)
AW978476   .b 1636 to 2306 671 to 1     Submitted on the opposite strand 671/671
(100 %)
6 diff
(99.2 %id)
AI983839 adenocarcinoma, Pancreas .b 1658 to 2171 517 to 3       515/517
(99 %)
0 diff
(100 %id)
CD677417 eye, Trabecular meshwork .b 1674 to 2307 1 to 634   AAA   634/634
(100 %)
0 diff
(100 %id)
AW248477.
matches multiple genes
lung, small cell carcinoma .b 1689 to 2307 629 to 11   AAA also hits gene CD2BP2 619/619
(100 %)
13 diff
(97.9 %id)
CD103156 Pooled-Skin .b 1694 to 2426 1 to 736       736/737
(99 %)
9 diff
(98.8 %id)
GD153666   .b 1752 to 2171 1 to 417       417/424
(98 %)
17 diff
(96.0 %id)
BG484494 lung .b 1755 to 2302 1 to 548       548/935
(58 %)
3 diff
(99.7 %id)
DN916505   .b 1770 to 2305 538 to 3       536/538
(99 %)
0 diff
(100 %id)
DB573391 hypothalamus .b 1782 to 2244 1 to 463     Submitted on the opposite strand 463/463
(100 %)
0 diff
(100 %id)
CB119466 Liver .b 1785 to 2307 542 to 21   AAA Submitted on the opposite strand 522/522
(100 %)
2 diff
(99.7 %id)
AI435096 pooled .b 1794 to 2307 521 to 8       514/521
(98 %)
0 diff
(100 %id)
N30747 placenta .b 1799 to 2307 513 to 2       512/517
(99 %)
0 diff
(100 %id)
BP376956 uterus .b 1803 to 2297 1 to 495   AAA   495/495
(100 %)
0 diff
(100 %id)
AA150763 uterus .b 1810 to 2311 503 to 1       503/505
(99 %)
3 diff
(99.5 %id)
AA187685   .b 1823 to 2311 503 to 13   AAA   491/491
(100 %)
2 diff
(99.6 %id)
BM150019 leukopheresis .b 1848 to 2302 463 to 9       455/463
(98 %)
5 diff
(99.0 %id)
BQ010766 placenta .b 1849 to 2307 476 to 18   AAA   459/459
(100 %)
1 diff
(99.8 %id)
AA742545 pooled germ cell tumors .b 1853 to 2306 452 to 1       452/452
(100 %)
8 diff
(98.3 %id)
AI924722 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 1853 to 2307 467 to 13   AAA   455/455
(100 %)
1 diff
(99.8 %id)
BP391301 pancreatic islet .b 1855 to 2307 1 to 453     Submitted on the opposite strand 453/453
(100 %)
0 diff
(100 %id)
CB118348 Liver .b 1859 to 2307 469 to 21   AAA Submitted on the opposite strand 449/449
(100 %)
0 diff
(100 %id)
N93607 lung .b 1860 to 2290 437 to 1       437/437
(100 %)
8 diff
(98.2 %id)
AI571118 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 1875 to 2302 428 to 1       428/428
(100 %)
3 diff
(99.3 %id)
AI241037 Kidney .b 1876 to 2307 431 to 1       431/431
(100 %)
1 diff
(99.8 %id)
AA830550 germinal center B cell .b 1898 to 2307 418 to 9       410/418
(98 %)
0 diff
(100 %id)
N20285.
matches multiple genes
melanocyte .b 1899 to 2307 437 to 12     also hits gene TROVE2 426/472
(90 %)
0 diff
(100 %id)
AW192352 adenocarcinoma, Pancreas .b 1899 to 2307 410 to 2       409/410
(99 %)
0 diff
(100 %id)
BU181428 epithelioid carcinoma, Pancreas .b 1925 to 2740 855 to 33   AAA Submitted on the opposite strand 823/827
(99 %)
36 diff
(95.7 %id)
R45119 whole brain .b 1928 to 2307 404 to 9       396/432
(91 %)
0 diff
(100 %id)
BU189355 melanotic melanoma, skin .b 1944 to 2703 36 to 817       782/892
(87 %)
32 diff
(96.5 %id)
BF095065 uterus_tumor .b 1961 to 2181 18 to 237       220/237
(92 %)
6 diff
(97.5 %id)
BE675036 B-cell, chronic lymphotic leukemia .b 1973 to 2307 352 to 18   AAA   335/335
(100 %)
0 diff
(100 %id)
BU932663 mixed (pool of 40 RNAs) .b 1978 to 2295 1 to 318   AAA   318/318
(100 %)
2 diff
(99.4 %id)
AV721234 hypothalamus .b 1979 to 2680 1 to 698       698/706
(98 %)
22 diff
(96.9 %id)
AA774592   .b 1981 to 2307 327 to 1       327/327
(100 %)
0 diff
(100 %id)
AW022286 cochlea, ear .b 2010 to 2307 8 to 305   AAA   298/305
(97 %)
8 diff
(97.4 %id)
BF220244 lung, small cell carcinoma .b 2010 to 2691 691 to 1   available from MGC,   691/701
(98 %)
18 diff
(97.5 %id)
AI015720   .b 2055 to 2306 257 to 6       252/257
(98 %)
0 diff
(100 %id)
AI632064 pooled germ cell tumors .b 2068 to 2307 241 to 2       240/241
(99 %)
0 diff
(100 %id)
AI934029 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 2070 to 2290 222 to 1       222/222
(100 %)
1 diff
(99.6 %id)
CF146721 CNCAP(3)T-225 cell line, Prostate .b 2091 to 2786 8 to 703   tiling clone,   696/703
(99 %)
6 diff
(99.2 %id)
TI_154179233   .b 2091 to 2923 76 to 906       831/832
(99 %)
12 diff
(98.6 %id)
BX429601 T cells (Jurkat cell line) .b 2120 to 3021 908 to 1       908/909
(99 %)
80 diff
(91.2 %id)
BX450929 T cells (Jurkat cell line) .b 2164 to 3028 858 to 6       853/892
(95 %)
0 diff
(100 %id)
BE539299 cervix .b 2177 to 2918 1 to 733       733/768
(95 %)
27 diff
(96.5 %id)
BI496880 cochlea, ear .b 2217 to 2740 8 to 531   AAA   524/531
(98 %)
6 diff
(98.9 %id)
BX443492 T cells (Jurkat cell line) .b 2316 to 3267 962 to 16       947/1021
(92 %)
0 diff
(100 %id)
TI_159719837   .b 2368 to 3322 1039 to 97   AAA   943/992
(95 %)
21 diff
(97.9 %id)
BX450930 T cells (Jurkat cell line) .b 2455 to 3024 575 to 7       569/646
(88 %)
0 diff
(100 %id)
TI_151733950   .b 2541 to 3324 868 to 86   AAA   783/954
(82 %)
25 diff
(97.4 %id)
AI791213 metastatic prostate bone lesion .b 2547 to 2744 254 to 57   AAA   198/213
(92 %)
0 diff
(100 %id)
AI821949 metastatic prostate bone lesion .b 2547 to 2744 34 to 231   AAA   198/231
(85 %)
6 diff
(97.5 %id)
AA876444 metastatic prostate bone lesion .b 2573 to 2744 1 to 172   AAA   172/172
(100 %)
1 diff
(99.5 %id)
CB852298 Human Lung Epithelial cells, lung .b 2573 to 3322 768 to 19   tiling clone, AAA   750/750
(100 %)
2 diff
(99.8 %id)
CA423239 cell lines, Chondrosarcoma .b 2604 to 3314 729 to 19   AAA   711/711
(100 %)
0 diff
(100 %id)
CK300454 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2717 to 3324 626 to 19   AAA   608/615
(98 %)
8 diff
(98.7 %id)
BM505514 insulinoma, Pancreas .b 2726 to 3296 571 to 1       571/571
(100 %)
0 diff
(100 %id)
BM021263 Islets of Langerhans, Pancreas .b 2785 to 3311 531 to 5       527/531
(99 %)
0 diff
(100 %id)
AW440977 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .b 2888 to 3326 443 to 1       443/443
(100 %)
5 diff
(98.9 %id)
AW169472 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 2907 to 3315 409 to 1       409/409
(100 %)
0 diff
(100 %id)
AI565411 Kidney .b 2977 to 3315 340 to 2       339/340
(99 %)
0 diff
(100 %id)
BQ718990 sympathetic trunk .b 2998 to 3308 311 to 1     Submitted on the opposite strand 311/320
(97 %)
2 diff
(99.4 %id)
AW014535   .b 3066 to 3324 274 to 18   AAA   257/257
(100 %)
11 diff
(95.8 %id)
DA014037 adrenal gland .c 1 to 561 2 to 562   tiling clone, capped   561/564
(99 %)
1 diff
(99.9 %id)
AA346843 heart .c 526 to 919 1 to 399   tiling clone,   399/399
(100 %)
12 diff
(97.0 %id)
BM458198 leiomyosarcoma, uterus .d 1 to 929 12 to 941 exact tiling clone,   930/1038
(89 %)
16 diff
(98.5 %id)
AW966648   .d 67 to 631 1 to 567 P180T W181L I182D Y183I I184Y     567/568
(99 %)
7 diff
(98.8 %id)
DA830029 placenta .d 390 to 1132 2 to 746   tiling clone, capped   745/752
(99 %)
5 diff
(99.4 %id)
BQ027578 mixed .d 600 to 969 538 to 169   AAA   370/520
(71 %)
2 diff
(99.7 %id)
DB375023 placenta .d 1512 to 2094 583 to 1   tiling clone,   583/591
(98 %)
12 diff
(98.0 %id)
AK094608 amygdala .e-u 1 to 3265 2 to 3271 L82F Y83L F84Y N85F H86N ... tiling clone, available from FLJ,   3271/3271
(100 %)
8 diff
(99.8 %id)
DA155491 amygdala .e-u 1 to 563 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA320558 hippocampus .e-u 190 to 684 2 to 496   capped   495/495
(100 %)
2 diff
(99.6 %id)
DA760092   .e-u 268 to 814 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB265927 uterus .e-u 459 to 1039 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DN992436 brain, whole brain .e-u 755 to 1205 9 to 461   tiling clone,   453/461
(98 %)
6 diff
(98.7 %id)
AI702080 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .e-u 1126 to 1829 1 to 688   tiling clone, Submitted on the opposite strand 688/778
(88 %)
33 diff
(95.8 %id)
DB139818 thymus .e-u 1146 to 1614 2 to 470   capped   469/475
(98 %)
2 diff
(99.6 %id)
BG571459 placenta .e-u 1299 to 1971 1 to 676   tiling clone,   676/678
(99 %)
11 diff
(98.4 %id)
DB097127 testis .e-u 1344 to 1918 2 to 580   tiling clone, capped   579/580
(99 %)
3 diff
(99.5 %id)
BE246424 leukopheresis .e-u 1881 to 2250 1 to 370       370/370
(100 %)
14 diff
(96.3 %id)
AA444389   .e-u 2033 to 2283 1 to 251   tiling clone,   251/251
(100 %)
1 diff
(99.7 %id)
BX470972   .e-u 2222 to 2908 1 to 686       686/686
(100 %)
3 diff
(99.6 %id)
BF574959 muscle (skeletal) .e-u 2545 to 3222 1 to 662       662/758
(87 %)
23 diff
(97.0 %id)
BX491649   .e-u 2554 to 2986 8 to 440       433/440
(98 %)
7 diff
(98.5 %id)
DB301899 amygdala .e-u 2747 to 3265 519 to 1       519/519
(100 %)
1 diff
(99.9 %id)
BX101517   .e-u 2823 to 3265 1 to 443   AAA   443/443
(100 %)
2 diff
(99.6 %id)
AA417341   .e-u 2823 to 3250 1 to 428   fully sequenced,   428/428
(100 %)
1 diff
(99.8 %id)
DB547632 hippocampus .e-u 2826 to 3264 1 to 439     Submitted on the opposite strand 439/440
(99 %)
2 diff
(99.6 %id)
AW135804   .e-u 2881 to 3265 402 to 18   AAA   385/395
(97 %)
5 diff
(98.8 %id)
DB139551 thymus .e-u 2908 to 3444 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
AI473843 follicular lymphoma, lymph node .e-u 2926 to 3265 363 to 24   AAA   340/340
(100 %)
1 diff
(99.8 %id)
AW138048   .e-u 3037 to 3265 246 to 18   AAA   229/229
(100 %)
1 diff
(99.6 %id)
AA417345   .e-u 3129 to 3268 140 to 1   fully sequenced,   140/140
(100 %)
0 diff
(100 %id)
DB159616 thymus .e-u 3144 to 3705 2 to 561   tiling clone, capped   560/560
(100 %)
1 diff
(99.9 %id)
DB012220 esophageal, tumor tissue .f 1 to 565 2 to 566 exact tiling clone, capped   565/565
(100 %)
0 diff
(100 %id)
DB084753 testis .g 1 to 560 5 to 564 exact tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
BP230661 brain .h 1 to 144 1 to 144 exact tiling clone,   479/581
(82 %)
7 diff
(98.8 %id)
CB958678 Pooled-Glandular .i 1 to 730 7 to 736 exact tiling clone,   736/736
(100 %)
4 diff
(99.5 %id)
BP270848 small intestine .i 5 to 576 1 to 573 T25A     573/582
(98 %)
3 diff
(99.5 %id)
AL600010   .i 8 to 600 1 to 593 exact     593/593
(100 %)
0 diff
(100 %id)
AK226099 brain .i 9 to 5369 1 to 5367 exact tiling clone,   5367/5367
(100 %)
12 diff
(99.8 %id)
AL046812 testis .i 1390 to 2002 1 to 615   tiling clone,   615/615
(100 %)
3 diff
(99.6 %id)
AI873077 pooled .i 2015 to 2323 1 to 309   tiling clone, Submitted on the opposite strand 309/309
(100 %)
3 diff
(99.1 %id)
BF670262 muscle (skeletal) .i 2171 to 2782 1 to 615       615/750
(82 %)
9 diff
(98.8 %id)
AL602382 human skeletal muscle .i 2597 to 3197 1 to 601       601/601
(100 %)
4 diff
(99.4 %id)
EB385391 eye, optic nerve .i 3040 to 3774 741 to 7     Submitted on the opposite strand 735/741
(99 %)
0 diff
(100 %id)
G36668   .i 3227 to 3590 1 to 365       365/368
(99 %)
4 diff
(99.0 %id)
N63366 cochlea, ear .i 3227 to 3590 1 to 365     Submitted on the opposite strand 365/368
(99 %)
4 diff
(99.0 %id)
AF217505 bone marrow .i 3677 to 5373 1 to 1713   tiling clone, AAA   1646/1713
(96 %)
16 diff
(99.1 %id)
CD523265 pooled .j 1 to 704 1 to 710 exact tiling clone,   710/825
(86 %)
11 diff
(98.7 %id)
BG387852 embryonal carcinoma, cell line, testis .j 480 to 1110 1 to 703   tiling clone,   703/836
(84 %)
56 diff
(93.4 %id)
BM546730 ovary (pool of 3) .k 1 to 868 11 to 881   tiling clone,   876/1128
(77 %)
23 diff
(98.0 %id)
BP307597 brain .k 471 to 1076 1 to 607 C48V S49F S51E L52P H53P ... tiling clone,   607/607
(100 %)
2 diff
(99.7 %id)
DA106993 cerebellum .l 1 to 574 2 to 575 exact tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
BM712671 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .m 1 to 488 1 to 488 exact tiling clone, fully sequenced, AAA   488/488
(100 %)
0 diff
(100 %id)
CN356232 embryonic stem cells, cell lines H1, H7, andH9 .m 11 to 471 1 to 461       461/461
(100 %)
5 diff
(99.0 %id)
CN356230 embryonic stem cells, DMSO-treated H9 cellline .m 15 to 472 1 to 458       458/458
(100 %)
0 diff
(100 %id)
BU738391 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .m 208 to 488 296 to 16   fully sequenced, AAA   281/281
(100 %)
0 diff
(100 %id)
CA407860 adipose .n-u 1 to 253 32 to 284 S45X V48X S51X tiling clone,   253/284
(89 %)
5 diff
(98.3 %id)
DA084828 cerebellum Gene CHORDC1, variant not shown       capped This clone was ignored    
N92790 lung Gene CHORDC1, variant not shown         This clone was ignored    
W20519 lung Gene CHORDC1, variant not shown         This clone was ignored    
AA441792   Gene CHORDC1, variant not shown              
AA441846   Gene CHORDC1, variant not shown              
DA913024   Gene CHORDC1, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB144826 thymus Gene CHORDC1, variant not shown       capped This clone was ignored    
DB345658 thymus Gene CHORDC1, variant not shown         This clone was ignored    
DB150568 thymus Gene CHORDC1, variant not shown       capped This clone was ignored    
DB346096 thymus Gene CHORDC1, variant not shown         This clone was ignored    
DB278404 uterus Gene CHORDC1, variant not shown       capped      
DB352323 uterus Gene CHORDC1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f, .g, .h, .i, .j, .k, .l, .m, .n-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI