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Gene CHD6TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
357 supporting clones for gene CHD6 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AY034072   .a 1 to 8326 1 to 8326 K134E E1031K D2663G tiling clone,   8326/8326
(100 %)
4 diff
(100.0 %id)
NM_032221.3   .a 1 to 10389 1 to 10389 exact RefSeq,   10389/10389
(100 %)
1 diff
(100.0 %id)
BP358431 mammary gland .a 64 to 645 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BX470681   .a 67 to 618 1 to 552       552/552
(100 %)
2 diff
(99.7 %id)
DA913049   .a 93 to 651 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA248988 brain .a 111 to 688 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA993120 synovial membrane tissue from rheumatioidarthritis .a 111 to 657 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB133483 thymus .a 111 to 670 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DA521192 brain .a 114 to 651 29 to 566   capped   538/538
(100 %)
0 diff
(100 %id)
DA408612 thalamus .a 116 to 682 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB136151 thymus .a 116 to 649 4 to 538   capped   535/537
(99 %)
1 diff
(99.9 %id)
DA434702 tongue, tumor tissue .a 118 to 641 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
AL698203 human skeletal muscle .a 118 to 456 1 to 339       339/339
(100 %)
1 diff
(99.8 %id)
DA440039 tongue, tumor tissue .a 119 to 704 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA628253 Kidney .a 123 to 651 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
CN398499 embryonic stem cells, DMSO-treated H9 cellline .a 136 to 759 9 to 632       624/632
(98 %)
0 diff
(100 %id)
BM565056 insulinoma, Pancreas .a 140 to 590 1 to 450       450/450
(100 %)
9 diff
(98.0 %id)
DN998030 breast cancer, Mammary gland (cancer tissue) .a 140 to 674 8 to 542       535/542
(98 %)
0 diff
(100 %id)
DA120241 cerebellum .a 210 to 510 257 to 557   capped   301/556
(54 %)
6 diff
(99.0 %id)
CN398497 embryonic stem cells, cell lines H1, H7, andH9 .a 225 to 973 1 to 749   tiling clone,   749/749
(100 %)
2 diff
(99.8 %id)
AL844400 stomach .a 240 to 461 222 to 1       222/246
(90 %)
5 diff
(98.0 %id)
BF002337 colon, colon tumor, RER+ .a 313 to 768 458 to 3   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 456/458
(99 %)
3 diff
(99.4 %id)
AW752043 colon .a 337 to 732 413 to 3       411/424
(96 %)
0 diff
(100 %id)
FN061497 breast carcinoma .a 396 to 473 77 to 3     Submitted on the opposite strand 75/78
(96 %)
0 diff
(100 %id)
EC478848 Prostate .a 503 to 621 1 to 112       112/113
(99 %)
8 diff
(93.0 %id)
AI312497 brain, oligodendroglioma .a 731 to 969 164 to 402     Submitted on the opposite strand 241/402
(59 %)
6 diff
(98.6 %id)
BF899153 marrow .a 758 to 932 181 to 8     Submitted on the opposite strand 174/181
(96 %)
1 diff
(99.5 %id)
BE172202 head_neck .a 859 to 1151 149 to 441       293/444
(65 %)
8 diff
(98.2 %id)
BE172526 head_neck .a 859 to 1140 27 to 307       281/307
(91 %)
6 diff
(98.1 %id)
BG952012 colon .a 885 to 1330 456 to 10       447/456
(98 %)
1 diff
(99.8 %id)
BP345468 synovial membrane .a 1045 to 1627 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BM849436 myeloma .a 1151 to 1789 1 to 639       639/639
(100 %)
0 diff
(100 %id)
BM560724 eye, retinoblastoma .a 1367 to 2183 1 to 822       822/1044
(78 %)
12 diff
(98.9 %id)
CV425048 placenta_normal .a 1400 to 1790 1 to 392       392/392
(100 %)
9 diff
(97.8 %id)
CV425051 placenta_normal .a 1410 to 1800 4 to 394       391/417
(93 %)
7 diff
(98.4 %id)
AL449759 brain .a 1607 to 2005 400 to 1       400/459
(87 %)
6 diff
(98.7 %id)
AL449760 brain .a 1607 to 2042 23 to 459       437/459
(95 %)
6 diff
(98.7 %id)
AL449763 brain .a 1607 to 1814 210 to 1       210/269
(78 %)
7 diff
(97.4 %id)
AL449764 brain .a 1607 to 1857 20 to 271       252/271
(92 %)
6 diff
(97.8 %id)
CD696648 normal nasopharynx .a 1687 to 2058 22 to 393       372/393
(94 %)
14 diff
(96.5 %id)
AL449761 brain .a 1809 to 2156 1 to 349       349/349
(100 %)
3 diff
(99.2 %id)
AL449550 testis .a 1869 to 2322 1 to 454       454/454
(100 %)
3 diff
(99.4 %id)
AL449755 brain .a 1874 to 2259 1 to 386       386/389
(99 %)
3 diff
(99.3 %id)
BP362706 thalamus .a 1941 to 2528 1 to 588       588/588
(100 %)
0 diff
(100 %id)
AK091551 brain .a 2096 to 4589 1 to 2494   available from FLJ,   2494/2494
(100 %)
3 diff
(99.9 %id)
AX747054   .a 2096 to 4589 1 to 2494       2494/2494
(100 %)
3 diff
(99.9 %id)
DA509456 brain .a 2097 to 2594 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
AB037756 brain .a 2200 to 10315 1 to 8116   tiling clone, available from KIAA,   8116/8116
(100 %)
4 diff
(100.0 %id)
BF331907 breast .a 2225 to 2367 154 to 12       143/154
(92 %)
0 diff
(100 %id)
BF950562 nervous_normal .a 2225 to 2616 405 to 2       404/405
(99 %)
9 diff
(97.8 %id)
BF950577 nervous_normal .a 2225 to 2572 429 to 76       354/429
(82 %)
12 diff
(97.3 %id)
BF955035 nervous_normal .a 2225 to 2616 405 to 2       404/405
(99 %)
9 diff
(97.8 %id)
BF955050 nervous_normal .a 2225 to 2572 429 to 76       354/429
(82 %)
12 diff
(97.3 %id)
AL449545 testis .a 2318 to 2764 1 to 447       447/452
(98 %)
21 diff
(95.4 %id)
AL449754 brain .a 2318 to 2571 1 to 254       254/254
(100 %)
2 diff
(99.3 %id)
AL449752 brain .a 2320 to 2794 501 to 27       475/501
(94 %)
0 diff
(100 %id)
AL449549 testis .a 2321 to 2794 500 to 27       474/502
(94 %)
0 diff
(100 %id)
AL449753 brain .a 2321 to 2536 216 to 1       216/248
(87 %)
0 diff
(100 %id)
AL449551 testis .a 2325 to 2794 496 to 27       470/496
(94 %)
0 diff
(100 %id)
BM153579 leukopheresis .a 2327 to 2877 1 to 545       545/546
(99 %)
6 diff
(99.0 %id)
AL449756 brain .a 2332 to 2794 491 to 29       463/491
(94 %)
1 diff
(99.8 %id)
AL449548 testis .a 2350 to 2794 1 to 445       445/508
(87 %)
1 diff
(99.9 %id)
AL449751 brain .a 2350 to 2794 1 to 445       445/510
(87 %)
1 diff
(99.9 %id)
BF818063 colon_ins .a 2383 to 2515 20 to 153       134/154
(87 %)
12 diff
(92.3 %id)
BF358835 lung_tumor .a 2392 to 2553 180 to 20       161/180
(89 %)
0 diff
(100 %id)
AA772229 parathyroid gland, parathyroid tumor .a 2396 to 3049 651 to 1       653/651
(100 %)
25 diff
(96.2 %id)
BE350351 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 2396 to 2998 606 to 5       602/606
(99 %)
11 diff
(98.2 %id)
BF439340 pooled .a 2447 to 3173 735 to 9       727/738
(98 %)
9 diff
(98.8 %id)
BP251110 hippocampus .a 2448 to 3028 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
AK026022   .a 2452 to 4759 1 to 2308   available from FLJ, AAA   2308/2431
(94 %)
3 diff
(99.9 %id)
BP254568 Kidney .a 2452 to 3032 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BQ311677 breast_normal .a 2565 to 2926 1 to 361       361/361
(100 %)
7 diff
(98.1 %id)
BQ311700 breast_normal .a 2576 to 2905 1 to 329       329/329
(100 %)
4 diff
(98.8 %id)
BF330044 breast_normal .a 2583 to 2765 184 to 1       184/184
(100 %)
1 diff
(99.5 %id)
BF371156 prostate_normal .a 2601 to 2794 1 to 193       193/220
(87 %)
6 diff
(97.3 %id)
BQ018949 lung, Metastatic Chondrosarcoma .a 2666 to 3297 638 to 8   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 631/642
(98 %)
1 diff
(99.9 %id)
BE088433 breast .a 2672 to 3009 386 to 43     Submitted on the opposite strand 344/386
(89 %)
3 diff
(99.3 %id)
BQ311751 breast_normal .a 2720 to 3132 427 to 17       411/427
(96 %)
2 diff
(99.6 %id)
BQ311750 breast_normal .a 2732 to 3190 480 to 22       459/480
(95 %)
0 diff
(100 %id)
BQ371369 prostate_normal .a 2735 to 3189 455 to 1       455/455
(100 %)
7 diff
(98.5 %id)
BF330049 breast_normal .a 2769 to 3190 446 to 25       422/446
(94 %)
0 diff
(100 %id)
BF371146 prostate_normal .a 2807 to 3183 378 to 2       377/378
(99 %)
0 diff
(100 %id)
BF330029 breast_normal .a 2815 to 3178 369 to 8       362/369
(98 %)
0 diff
(100 %id)
BF371145 prostate_normal .a 2840 to 3168 330 to 1       330/332
(99 %)
6 diff
(98.2 %id)
BF330015 breast_normal .a 2856 to 3190 354 to 20       335/354
(94 %)
0 diff
(100 %id)
BM455824 lymph, lymphoma, cell line .a 3206 to 3829 16 to 640       625/1086
(57 %)
26 diff
(97.7 %id)
BF359001 lung_tumor .a 3216 to 3848 637 to 1       637/639
(99 %)
21 diff
(96.8 %id)
AL708180 human skeletal muscle .a 3273 to 3530 1 to 258       258/258
(100 %)
0 diff
(100 %id)
CN398496 embryonic stem cells, cell lines H1, H7, andH9 .a 3302 to 3735 1 to 434       434/434
(100 %)
2 diff
(99.6 %id)
DA614299   .a 3395 to 3967 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
AW748012 breast .a 3601 to 4183 603 to 26       578/603
(95 %)
1 diff
(99.9 %id)
BF359005 lung_tumor .a 3731 to 3890 1 to 160       160/160
(100 %)
7 diff
(95.7 %id)
BI027860 marrow .a 3735 to 4007 288 to 15       274/292
(93 %)
2 diff
(99.4 %id)
BQ008471 Chondrosarcoma, Left Pubic Bone .a 3846 to 4592 763 to 16   AAA   748/748
(100 %)
2 diff
(99.8 %id)
W25616 lung .a 3856 to 4093 1 to 239       239/241
(99 %)
2 diff
(99.2 %id)
BM723141 eye, fetal eye .a 3866 to 4523 1 to 658       658/658
(100 %)
0 diff
(100 %id)
BG006223 placenta_normal .a 3920 to 4185 10 to 277       268/285
(94 %)
16 diff
(94.4 %id)
DB316253 brain .a 4055 to 4589 535 to 1       535/535
(100 %)
1 diff
(99.9 %id)
CN398498 embryonic stem cells, cell lines H1, H7, andH9 .a 4125 to 4521 1 to 397       397/397
(100 %)
2 diff
(99.5 %id)
EC471622 Prostate .a 4208 to 4307 1 to 99       99/101
(98 %)
2 diff
(98.1 %id)
BX485097   .a 4216 to 4660 1 to 445       445/445
(100 %)
0 diff
(100 %id)
BG997331 head_neck .a 4263 to 4736 514 to 39       476/514
(92 %)
8 diff
(98.5 %id)
BQ338033 nervous_normal .a 4358 to 4524 180 to 14       167/180
(92 %)
6 diff
(96.7 %id)
AL449572 testis .a 4465 to 4721 28 to 284       257/287
(89 %)
7 diff
(97.6 %id)
EC570626 Prostate .a 4534 to 4591 1 to 58       58/58
(100 %)
0 diff
(100 %id)
BM677665 eye, fetal eye .a 4568 to 5208 659 to 19       641/659
(97 %)
1 diff
(99.9 %id)
BX492101   .a 4717 to 5188 1 to 472       472/472
(100 %)
3 diff
(99.4 %id)
CN398495 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 4921 to 5420 1 to 500       500/500
(100 %)
1 diff
(99.8 %id)
DA104877 cerebellum .a 5118 to 5700 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
BF931162 nervous_tumor .a 5143 to 5474 12 to 354       343/356
(96 %)
30 diff
(91.6 %id)
DA735944   .a 5149 to 5928 2 to 785   capped   784/788
(99 %)
6 diff
(99.3 %id)
BQ307275 breast .a 5208 to 5777 568 to 1       568/568
(100 %)
12 diff
(97.9 %id)
CX761693 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 5208 to 5818 1 to 612     Submitted on the opposite strand 612/749
(81 %)
6 diff
(99.2 %id)
BX475948   .a 5400 to 5785 1 to 386       386/386
(100 %)
1 diff
(99.8 %id)
AA668128   .a 5566 to 5783 218 to 1       218/218
(100 %)
3 diff
(98.7 %id)
BM718945 eye, fetal eye .a 5604 to 6330 1 to 727       727/727
(100 %)
0 diff
(100 %id)
DA399929 thalamus .a 5636 to 6207 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BP250078 hippocampus .a 5637 to 6219 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
TI_151758560   .a 5761 to 6651 933 to 55       879/1003
(87 %)
17 diff
(98.4 %id)
DA116235 cerebellum .a 5829 to 6407 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
AL713613 human skeletal muscle .a 5886 to 6485 1 to 600       600/600
(100 %)
3 diff
(99.5 %id)
BF883912 lung_tumor .a 6007 to 6457 1 to 451       451/451
(100 %)
1 diff
(99.8 %id)
AL844251 breast .a 6042 to 6396 361 to 10       352/361
(97 %)
0 diff
(100 %id)
AL732181 breast .a 6043 to 6373 330 to 1       330/670
(49 %)
3 diff
(99.6 %id)
AL844252 breast .a 6108 to 6396 1 to 291       291/291
(100 %)
6 diff
(98.0 %id)
BQ932778 sciatic nerve .a 6144 to 6943 12 to 828       817/926
(88 %)
25 diff
(97.4 %id)
DB229644 trachea .a 6318 to 6888 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA224975 brain .a 6407 to 7024 2 to 619   capped   618/618
(100 %)
0 diff
(100 %id)
DA231984 brain .a 6412 to 6993 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA595580 lung .a 6420 to 6986 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA211418 brain .a 6587 to 7137 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA246875 brain .a 6703 to 7288 2 to 587   capped   586/587
(99 %)
2 diff
(99.7 %id)
DA106679 cerebellum .a 6766 to 7301 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA798521 brain .a 6768 to 7323 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
BX486446   .a 6777 to 7306 1 to 531       531/531
(100 %)
1 diff
(99.9 %id)
CF145230 CNCAP(3)T-225 cell line, Prostate .a 6825 to 7253 1 to 429       429/429
(100 %)
6 diff
(98.7 %id)
CF145263 CNCAP(3)T-225 cell line, Prostate .a 6825 to 7205 1 to 381       381/381
(100 %)
8 diff
(98.0 %id)
TI_154177390   .a 6832 to 7444 80 to 694       615/616
(99 %)
14 diff
(97.8 %id)
TI_154177407   .a 6832 to 7430 80 to 678       599/613
(97 %)
11 diff
(98.3 %id)
BU188294 melanotic melanoma, skin .a 6950 to 7810 12 to 875       864/877
(98 %)
25 diff
(97.2 %id)
BY799129 eye .a 6958 to 7575 1 to 618       618/618
(100 %)
2 diff
(99.7 %id)
CD359218 testis .a 7134 to 7888 23 to 781       760/927
(81 %)
17 diff
(98.2 %id)
AL449847 heart .a 7330 to 7808 479 to 1       479/479
(100 %)
0 diff
(100 %id)
AL449845 heart .a 7352 to 7811 460 to 1       460/460
(100 %)
9 diff
(98.1 %id)
DA291232 hippocampus .a 7365 to 7795 2 to 432   capped   431/431
(100 %)
0 diff
(100 %id)
AW500754 lymph .a 7389 to 7799 1 to 411       411/411
(100 %)
6 diff
(98.6 %id)
TI_154155035   .a 7395 to 7950 79 to 635       557/557
(100 %)
21 diff
(96.3 %id)
AL705972 human skeletal muscle .a 7502 to 8320 1 to 820       820/820
(100 %)
7 diff
(99.2 %id)
BC021907 Lymph, lymphoma .a 7519 to 10270 20 to 2771   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 2752/2771
(99 %)
6 diff
(99.8 %id)
BX488151   .a 7534 to 8079 1 to 547       547/547
(100 %)
7 diff
(98.8 %id)
DA998119   .a 7545 to 8097 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
BX482934   .a 7571 to 8240 1 to 670       670/670
(100 %)
4 diff
(99.5 %id)
AL449772 brain .a 7594 to 7856 30 to 292       263/299
(87 %)
1 diff
(99.7 %id)
DA118357 cerebellum .a 7636 to 8198 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
AL449571 testis .a 7639 to 8127 1 to 489       489/489
(100 %)
3 diff
(99.4 %id)
AL449770 brain .a 7639 to 8138 1 to 500       500/500
(100 %)
0 diff
(100 %id)
AL449771 brain .a 7639 to 8137 1 to 499       499/502
(99 %)
3 diff
(99.5 %id)
AL449833 heart .a 7639 to 8157 1 to 519       519/519
(100 %)
2 diff
(99.7 %id)
AL449843 heart .a 7639 to 8169 1 to 531       531/531
(100 %)
2 diff
(99.7 %id)
DB169955 kidney, tumor tissue .a 7715 to 8260 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DB368347   .a 7821 to 8343 534 to 1       534/538
(99 %)
28 diff
(94.8 %id)
DA181575 amygdala .a 7853 to 8400 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
BM693619 eye, fetal eyes .a 7863 to 8529 1 to 667       667/667
(100 %)
1 diff
(99.9 %id)
BX486009   .a 7899 to 8334 1 to 436       436/443
(98 %)
11 diff
(97.6 %id)
BX486044   .a 7900 to 8292 1 to 393       393/393
(100 %)
0 diff
(100 %id)
DA261825 caudate nucleus .a 7982 to 8552 2 to 571   capped   570/571
(99 %)
2 diff
(99.7 %id)
DA134329 alzheimer cortex .a 7983 to 8528 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
BP293763 lung .a 8040 to 8612 1 to 573       573/573
(100 %)
3 diff
(99.5 %id)
AA337020 endometrium .a 8062 to 8336 1 to 275       275/277
(99 %)
1 diff
(99.7 %id)
AA995474 germ cell tumor .a 8083 to 8367 284 to 1       284/284
(100 %)
1 diff
(99.7 %id)
BM803783 leiomyosarcoma, uterus .a 8172 to 9045 31 to 917       887/1040
(85 %)
6 diff
(99.5 %id)
CB218148 mandible, pooled .a 8293 to 8906 1 to 614     Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 614/614
(100 %)
7 diff
(98.9 %id)
DB243956 stomach, tumor tissue .a 8326 to 8881 2 to 558   capped   557/558
(99 %)
2 diff
(99.7 %id)
DA748163   .a 8331 to 8894 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA828673 placenta .a 8331 to 9045 2 to 726   capped   725/769
(94 %)
17 diff
(97.8 %id)
DA487450 brain .a 8340 to 8903 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BE564472 bladder, carcinoma, cell line .a 8373 to 9045 1 to 671       671/861
(77 %)
34 diff
(96.1 %id)
BX505272   .a 8378 to 8945 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
CN262096 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 8452 to 8919 9 to 476       468/476
(98 %)
6 diff
(98.8 %id)
BX506713 Liver .a 8465 to 9105 1 to 642       642/642
(100 %)
2 diff
(99.7 %id)
AW150646 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 8482 to 8901 420 to 1       420/420
(100 %)
0 diff
(100 %id)
BM721994 eye, fetal eye .a 8598 to 9177 1 to 580     Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 580/580
(100 %)
1 diff
(99.9 %id)
CX783688 human embryonic stem cells .a 8622 to 9327 1 to 706       706/706
(100 %)
2 diff
(99.8 %id)
FN163104 breast carcinoma .a 8641 to 8750 1 to 107       107/107
(100 %)
3 diff
(97.2 %id)
AV706805 adrenal gland .a 9079 to 9262 515 to 689       689/691
(99 %)
14 diff
(98.0 %id)
BM669206 eye, fetal eyes .a 9192 to 9794 617 to 18   AAA   600/600
(100 %)
4 diff
(99.4 %id)
BM678508 eye, fetal eye .a 9675 to 10372 715 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 697/697
(100 %)
3 diff
(99.6 %id)
CB218147 mandible, pooled .a 9697 to 10270 609 to 36   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 574/574
(100 %)
4 diff
(99.4 %id)
N92897 lung .a 9986 to 10320 338 to 2       337/338
(99 %)
0 diff
(100 %id)
DB373254 placenta .a 10013 to 10315 304 to 1       304/309
(98 %)
2 diff
(99.4 %id)
DC408701 thymus .b 1 to 514 1 to 514   tiling clone,   514/514
(100 %)
1 diff
(99.9 %id)
DC311790 alzheimer cortex .b 5 to 558 9 to 562       554/554
(100 %)
0 diff
(100 %id)
DC361941 Kidney .b 9 to 576 1 to 568       568/568
(100 %)
0 diff
(100 %id)
BC012516 Eye, retinoblastoma .b 12 to 624 1 to 612   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 612/613
(99 %)
5 diff
(99.2 %id)
AK296955 tongue, tumor tissue .b 16 to 3130 1 to 3115 N860D tiling clone,   3115/3115
(100 %)
2 diff
(100.0 %id)
DC347845 tongue, tumor tissue .b 16 to 577 1 to 562       562/573
(98 %)
0 diff
(100 %id)
DC369079   .b 19 to 577 1 to 559       559/571
(97 %)
1 diff
(99.9 %id)
DA055359 cerebellum .b 23 to 593 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DC404960 thymus .b 23 to 577 1 to 556       556/558
(99 %)
3 diff
(99.5 %id)
BE784070 eye, retinoblastoma .b 33 to 605 1 to 572   available from MGC,   572/572
(100 %)
1 diff
(99.9 %id)
DB296525 cerebellum .b 2580 to 3125 547 to 1   tiling clone,   547/547
(100 %)
1 diff
(99.9 %id)
AL706379 human skeletal muscle .c 1 to 397 1 to 396   tiling clone,   396/398
(99 %)
10 diff
(97.5 %id)
AL706380 human skeletal muscle .c 86 to 393 1 to 298       298/298
(100 %)
14 diff
(95.4 %id)
AA579465   .c 148 to 521 1 to 374       374/374
(100 %)
6 diff
(98.4 %id)
AA568401   .c 150 to 550 1 to 401       401/401
(100 %)
6 diff
(98.6 %id)
DB128751 thymus .c 153 to 708 2 to 557   tiling clone, capped   556/561
(99 %)
1 diff
(99.9 %id)
BF967065 brain, hypothalamus .c 471 to 1099 1 to 632   tiling clone, fully sequenced,   632/632
(100 %)
9 diff
(98.6 %id)
BF967705 brain, hypothalamus .c 1038 to 1770 735 to 5   tiling clone, fully sequenced,   731/735
(99 %)
3 diff
(99.6 %id)
BG182946   .c 1063 to 1800 1 to 741   tiling clone, AAA   741/761
(97 %)
11 diff
(98.6 %id)
BC040016 Eye, retinoblastoma .d 1 to 2440 41 to 2480   available from MGC, AAA   2451/2480
(98 %)
6 diff
(99.8 %id)
BM799444 eye, retinoblastoma .d 1 to 968 49 to 1018   available from MGC,   976/1056
(92 %)
21 diff
(98.1 %id)
BC039860.
matches multiple genes
brain, Brain, hippocampus, hippocampus .d 1 to 2440 41 to 2480 exact tiling clone, available from MGC, AAA also hits gene SLC45A1 2451/2480
(98 %)
6 diff
(99.8 %id)
BU619922 cell lines, Chondrosarcoma .d 368 to 1152 800 to 19   AAA   782/782
(100 %)
6 diff
(99.3 %id)
BQ020960 lung, Metastatic Chondrosarcoma .d 608 to 1147 558 to 19   AAA   540/560
(96 %)
0 diff
(100 %id)
BQ000834 lung, Metastatic Chondrosarcoma .d 608 to 1144 556 to 21       536/564
(95 %)
0 diff
(100 %id)
AW073784 2 pooled high-grade transitional celltumors, genitourinary tract .d 758 to 1147 416 to 27   AAA   390/390
(100 %)
14 diff
(96.5 %id)
AW052068 Kidney .d 2075 to 2430 357 to 2       356/357
(99 %)
0 diff
(100 %id)
DB448774 testis .e 1 to 728 1 to 728 K72N R109I R133L S163* tiling clone,   728/728
(100 %)
11 diff
(98.5 %id)
BG213063   .f -8 to 696 714 to 10 D8I F9S R10A T12P H13P ... tiling clone, Submitted on the opposite strand 705/857
(82 %)
21 diff
(97.6 %id)
AL449542 testis .f 248 to 705 1 to 457   tiling clone, AAA   457/457
(100 %)
1 diff
(99.8 %id)
AL449541 testis .f 256 to 705 1 to 450   AAA   450/450
(100 %)
2 diff
(99.6 %id)
CN398494 embryonic stem cells, DMSO-treated H9 cellline .g 1 to 697 7 to 705 E144G P145A K146E Q147A D149R ... tiling clone,   699/707
(98 %)
9 diff
(98.8 %id)
BP315625 mammary gland .h 1 to 583 1 to 583 exact tiling clone,   583/583
(100 %)
0 diff
(100 %id)
BF371116 prostate_normal .i 1 to 403 9 to 411 P2A tiling clone,   403/411
(98 %)
6 diff
(98.6 %id)
AL449758 brain .j 1 to 559 562 to 4 exact tiling clone,   559/562
(99 %)
0 diff
(100 %id)
AL449757 brain .j 3 to 552 1 to 551 L46S E47G L49S L51A M52Y ...     551/551
(100 %)
3 diff
(99.5 %id)
AL449762 brain .j 72 to 545 475 to 1       475/475
(100 %)
4 diff
(99.2 %id)
BX642730   .k 1 to 450 1 to 448   tiling clone,   448/448
(100 %)
4 diff
(99.2 %id)
BF801218 colon_ins .k 188 to 644 459 to 7 G75D P76T Q81S S82L G83V ... tiling clone, Submitted on the opposite strand 453/459
(98 %)
1 diff
(99.8 %id)
CD689291 normal nasopharynx .l 1 to 465 27 to 491 exact tiling clone,   469/491
(95 %)
6 diff
(98.8 %id)
BU630921 cell lines, Chondrosarcoma .m 1 to 565 564 to 1 exact tiling clone,   564/564
(100 %)
6 diff
(99.0 %id)
BE177002 head_neck .n 1 to 683 3 to 678   tiling clone,   678/701
(96 %)
19 diff
(97.3 %id)
DA809112 brain .n 42 to 575 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
AK098144 trachea .n 121 to 2949 1 to 2829   tiling clone, available from FLJ,   2829/2829
(100 %)
1 diff
(100.0 %id)
DB201610 trachea .n 122 to 706 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
BX472386   .n 442 to 1142 1 to 700       700/700
(100 %)
4 diff
(99.5 %id)
DB282231 uterus .n 708 to 1250 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DB160253 thymus .n 709 to 1302 2 to 595   capped   594/594
(100 %)
2 diff
(99.7 %id)
DA333835 hippocampus .n 727 to 1313 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
BE061269 breast .n 988 to 1675 1 to 683       683/683
(100 %)
7 diff
(99.0 %id)
DA236393 brain .n 1008 to 1572 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DB151925 thymus .n 1178 to 1745 2 to 569   tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
DA319465 hippocampus .n 1196 to 1752 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
BX491160   .n 1387 to 1862 1 to 476       476/477
(99 %)
0 diff
(100 %id)
AL449844 heart .n 1420 to 1910 25 to 515       491/515
(95 %)
6 diff
(98.9 %id)
AL449846 heart .n 1420 to 1929 25 to 534       510/534
(95 %)
7 diff
(98.7 %id)
BF344174 brain, glioblastoma with EGFR amplification .n 1561 to 2233 1 to 673       673/673
(100 %)
0 diff
(100 %id)
BF344687 brain, glioblastoma with EGFR amplification .n 1563 to 2126 1 to 575       575/575
(100 %)
13 diff
(97.8 %id)
DB348369 trachea .n 2485 to 2949 465 to 1       465/465
(100 %)
0 diff
(100 %id)
DB352572 uterus .n 4311 to 4868 559 to 1   tiling clone,   559/559
(100 %)
1 diff
(99.9 %id)
DA323542 hippocampus .o-u 1 to 505 2 to 507 exact tiling clone, to resequence, capped   506/506
(100 %)
1 diff
(99.9 %id)
BF978556 melanotic melanoma, high MDR, skin .o-u 1231 to 1975 1 to 750   tiling clone,   750/884
(84 %)
24 diff
(97.3 %id)
BG541532 lung .o-u 1313 to 1997 1 to 687   tiling clone,   687/852
(80 %)
14 diff
(98.4 %id)
BE565318 bladder, carcinoma, cell line .o-u 1336 to 2012 13 to 685       673/836
(80 %)
31 diff
(96.3 %id)
BU561521 testis .o-u 1473 to 2227 1 to 756       756/756
(100 %)
4 diff
(99.5 %id)
BU567772 testis .o-u 1473 to 2303 1 to 841   tiling clone,   841/846
(99 %)
25 diff
(97.1 %id)
BU853434 testis .o-u 1473 to 2203 1 to 735       735/826
(88 %)
13 diff
(98.5 %id)
BU853966 testis .o-u 1473 to 2126 1 to 667       667/720
(92 %)
36 diff
(95.0 %id)
AA284409 germinal center B cell .o-u 1484 to 1890 1 to 407       407/407
(100 %)
1 diff
(99.8 %id)
BG674484 skin .o-u 1485 to 2422 1 to 944       944/946
(99 %)
21 diff
(97.8 %id)
D53065 brain .o-u 1596 to 1876 1 to 283       283/283
(100 %)
3 diff
(99.0 %id)
F07036 brain, total brain .o-u 1598 to 1821 1 to 224       224/224
(100 %)
1 diff
(99.6 %id)
Z44137 brain, total brain .o-u 1598 to 1909 1 to 312       312/312
(100 %)
1 diff
(99.7 %id)
BU852800 testis .o-u 1622 to 2406 1 to 792       792/796
(99 %)
58 diff
(92.8 %id)
CD676499 eye, Trabecular meshwork .o-u 1671 to 2161 1 to 491   fully sequenced,   491/491
(100 %)
1 diff
(99.8 %id)
FN062795 breast carcinoma .o-u 1695 to 1770 1 to 75       75/75
(100 %)
4 diff
(94.7 %id)
BE048043 brain, tumor, 5 pooled (see description) .o-u 1746 to 2257 1 to 512       512/512
(100 %)
1 diff
(99.9 %id)
CA313592 Human Lung Epithelial cells, lung .o-u 1791 to 2566 794 to 19   AAA   776/776
(100 %)
1 diff
(99.9 %id)
CN262097 embryonic stem cells, DMSO-treated H9 cellline .o-u 1795 to 2086 1 to 292       292/292
(100 %)
0 diff
(100 %id)
AA456697 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .o-u 1806 to 2157 30 to 378   fully sequenced,   349/378
(92 %)
6 diff
(98.5 %id)
AA456708 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .o-u 1806 to 1988 29 to 211       183/211
(86 %)
6 diff
(97.2 %id)
TI_149304189   .o-u 1883 to 2566 778 to 92   AAA   687/687
(100 %)
4 diff
(99.5 %id)
BQ021583 lung, Metastatic Chondrosarcoma .o-u 1918 to 2566 667 to 19   AAA   649/649
(100 %)
2 diff
(99.7 %id)
BX112863 ovarian tumor, ovary .o-u 1931 to 2615 1 to 685   tiling clone,   685/685
(100 %)
0 diff
(100 %id)
BF572029 melanotic melanoma, high MDR, skin .o-u 1947 to 2566 1 to 611   AAA   611/611
(100 %)
21 diff
(96.6 %id)
BF976777 melanotic melanoma, high MDR, skin .o-u 1947 to 2552 1 to 600       600/825
(72 %)
18 diff
(97.9 %id)
AA410276 ovarian tumor, ovary .o-u 1970 to 2299 1 to 330       330/330
(100 %)
0 diff
(100 %id)
CB052469 leiomyosarcoma, soft tissue .o-u 2019 to 2325 4 to 310   fully sequenced, Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 307/310
(99 %)
5 diff
(98.4 %id)
BM700109 eye, lens .o-u 2023 to 2571 1 to 548       548/548
(100 %)
6 diff
(99.0 %id)
AI916627 Kidney .o-u 2038 to 2551 530 to 17       514/530
(96 %)
0 diff
(100 %id)
AI951142 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .o-u 2038 to 2566 529 to 1       529/529
(100 %)
1 diff
(99.9 %id)
AA344130 gall bladder .o-u 2041 to 2331 1 to 293       293/293
(100 %)
3 diff
(99.0 %id)
AW963106   .o-u 2042 to 2566 1 to 525   AAA   525/525
(100 %)
1 diff
(99.9 %id)
AI754683 bone marrow stroma .o-u 2054 to 2578 552 to 28   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 525/525
(100 %)
0 diff
(100 %id)
AI949070 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .o-u 2062 to 2569 510 to 1       510/510
(100 %)
3 diff
(99.5 %id)
AI949497 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .o-u 2062 to 2569 508 to 1       508/508
(100 %)
0 diff
(100 %id)
H45917 breast .o-u 2070 to 2354 1 to 292       292/307
(95 %)
11 diff
(96.5 %id)
AI739654 colon, colon tumor, RER+ .o-u 2070 to 2637 569 to 1       569/569
(100 %)
2 diff
(99.7 %id)
BE932895 head_neck .o-u 2098 to 2547 1 to 450       450/450
(100 %)
6 diff
(98.7 %id)
DB309243 hippocampus .o-u 2101 to 2623 525 to 1   to resequence,   525/525
(100 %)
3 diff
(99.5 %id)
AI042153 parathyroid gland, parathyroid tumor .o-u 2101 to 2619 524 to 6       519/524
(99 %)
0 diff
(100 %id)
AI674871 adenocarcinoma, Pancreas .o-u 2101 to 2567 467 to 1       467/467
(100 %)
0 diff
(100 %id)
AI870245 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .o-u 2101 to 2640 542 to 2       541/542
(99 %)
0 diff
(100 %id)
AI685138 pooled .o-u 2109 to 2569 461 to 1       461/461
(100 %)
0 diff
(100 %id)
D61906   .o-u 2115 to 2402 1 to 288       288/288
(100 %)
3 diff
(99.0 %id)
AA293517 ovarian tumor, ovary .o-u 2117 to 2261 1 to 145       145/145
(100 %)
0 diff
(100 %id)
AW025853 pooled germ cell tumors .o-u 2129 to 2572 444 to 1       444/444
(100 %)
0 diff
(100 %id)
CD676498 eye, Trabecular meshwork .o-u 2131 to 2618 504 to 17   fully sequenced, AAA   488/488
(100 %)
0 diff
(100 %id)
AI278680 carcinoid, lung .o-u 2134 to 2583 450 to 1       450/450
(100 %)
0 diff
(100 %id)
AI492625 anaplastic oligodendroglioma, brain .o-u 2144 to 2573 430 to 1       430/430
(100 %)
0 diff
(100 %id)
AA456300 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .o-u 2149 to 2566 418 to 1   fully sequenced,   418/418
(100 %)
0 diff
(100 %id)
AA099557 colon, tumor .o-u 2151 to 2568 423 to 1       423/426
(99 %)
5 diff
(98.9 %id)
BF063641 colon, colon tumor, RER+ .o-u 2156 to 2640 490 to 6       485/490
(98 %)
0 diff
(100 %id)
BU963469 mixed (pool of 40 RNAs) .o-u 2161 to 2502 1 to 342       342/369
(92 %)
7 diff
(98.2 %id)
CV396729 head_neck .o-u 2162 to 2501 15 to 360       346/360
(96 %)
6 diff
(98.4 %id)
AI359120 brain, glioblastoma (pooled) .o-u 2182 to 2566 385 to 1       385/385
(100 %)
1 diff
(99.8 %id)
AI925651 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .o-u 2195 to 2587 398 to 5       394/398
(98 %)
0 diff
(100 %id)
DW414300 Liver .o-u 2200 to 2499 17 to 316       300/316
(94 %)
6 diff
(98.2 %id)
AW771794 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .o-u 2204 to 2640 436 to 1       436/436
(100 %)
2 diff
(99.6 %id)
AA456310 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .o-u 2217 to 2566 350 to 1       350/350
(100 %)
0 diff
(100 %id)
AA687157 germinal center B cell .o-u 2223 to 2567 345 to 1       345/345
(100 %)
0 diff
(100 %id)
TI_149291368   .o-u 2225 to 3065 902 to 78   AAA   825/911
(90 %)
22 diff
(97.6 %id)
AW771801 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .o-u 2234 to 2640 406 to 1       406/406
(100 %)
4 diff
(99.1 %id)
BQ029010 Bone, Subchondral Bone .o-u 2235 to 2640 424 to 19   AAA   406/406
(100 %)
0 diff
(100 %id)
AA292537 germinal center B cell .o-u 2240 to 2623 384 to 1       384/384
(100 %)
0 diff
(100 %id)
AW023800 cochlea, ear .o-u 2245 to 2601 8 to 364       357/364
(98 %)
11 diff
(97.0 %id)
AW023877 cochlea, ear .o-u 2245 to 2612 8 to 375       368/375
(98 %)
8 diff
(97.9 %id)
BM988023 Bone, Subchondral Bone .o-u 2246 to 2640 413 to 19   AAA   395/395
(100 %)
0 diff
(100 %id)
FN115981 breast carcinoma .o-u 2249 to 2320 1 to 73       73/73
(100 %)
3 diff
(95.9 %id)
AI261438 Kidney .o-u 2250 to 2566 317 to 1       317/317
(100 %)
0 diff
(100 %id)
BE719950 head_neck .o-u 2262 to 2564 1 to 307       307/312
(98 %)
12 diff
(96.2 %id)
BE815385 breast_normal .o-u 2263 to 2594 6 to 336       331/336
(98 %)
8 diff
(97.7 %id)
CB052468 leiomyosarcoma, soft tissue .o-u 2295 to 2880 612 to 27   fully sequenced, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 586/586
(100 %)
0 diff
(100 %id)
D80680 brain .o-u 2315 to 2566 252 to 1       252/252
(100 %)
0 diff
(100 %id)
EC548827 Prostate .o-u 2330 to 2440 1 to 107       107/107
(100 %)
5 diff
(95.4 %id)
BM973992 lung .o-u 2352 to 3065 722 to 13   tiling clone, AAA   710/710
(100 %)
4 diff
(99.5 %id)
TI_151716922   .o-u 2360 to 3083 836 to 113   tiling clone,   724/836
(86 %)
0 diff
(100 %id)
AA732425 germinal center B cell .o-u 2380 to 2625 261 to 17   AAA   245/245
(100 %)
2 diff
(99.2 %id)
AW827110 hepatic adenoma, Liver .o-u 2425 to 2644 1 to 220   AAA   220/220
(100 %)
1 diff
(99.6 %id)
AI700718 carcinoid, lung .o-u 2540 to 2879 340 to 1       340/340
(100 %)
3 diff
(99.2 %id)
BE218216 carcinoid, lung .o-u 2540 to 2879 340 to 1       340/340
(100 %)
3 diff
(99.2 %id)
BE504166 carcinoid, lung .o-u 2540 to 2879 340 to 1       340/340
(100 %)
3 diff
(99.2 %id)
BE327309 carcinoid, lung .o-u 2540 to 2879 340 to 1       340/340
(100 %)
3 diff
(99.2 %id)
AI801470 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .o-u 2589 to 3064 476 to 1       476/476
(100 %)
0 diff
(100 %id)
BM700835 eye, human retina .o-u 2598 to 2734 1 to 137   fully sequenced,   137/137
(100 %)
3 diff
(97.9 %id)
AA962388 carcinoid, lung .o-u 2609 to 3064 456 to 1       456/456
(100 %)
6 diff
(98.7 %id)
AI056915 brain, glioblastoma (pooled) .o-u 2626 to 3065 452 to 13   AAA   440/440
(100 %)
0 diff
(100 %id)
BG059766 brain, glioblastoma without EGFR amplification .o-u 2629 to 3065 437 to 1       437/437
(100 %)
0 diff
(100 %id)
AA741000 germinal center B cell .o-u 2660 to 3070 415 to 6       410/415
(98 %)
0 diff
(100 %id)
BE674356 carcinoid, lung .o-u 2674 to 3068 395 to 1   tiling clone,   395/395
(100 %)
0 diff
(100 %id)
BF197396 Kidney .o-u 2676 to 3063 391 to 4       388/391
(99 %)
0 diff
(100 %id)
BM672200 eye, human retina .o-u 2704 to 3084 380 to 1   fully sequenced,   380/380
(100 %)
8 diff
(97.9 %id)
AA293518 ovarian tumor, ovary .o-u 2896 to 3065 170 to 1       170/170
(100 %)
0 diff
(100 %id)
AA436366 ovarian tumor, ovary .o-u 2920 to 3038 119 to 1       119/119
(100 %)
0 diff
(100 %id)
BE670889 carcinoid, lung .o-u 2952 to 3068 117 to 1       117/117
(100 %)
0 diff
(100 %id)
DN913183   .p 1 to 623 1 to 623   tiling clone,   623/623
(100 %)
1 diff
(99.9 %id)
BE082494 breast .p 43 to 344 1 to 299       299/368
(81 %)
39 diff
(89.5 %id)
DN913184   .p 126 to 823 706 to 10   tiling clone,   697/706
(98 %)
0 diff
(100 %id)
CV372394 lung_normal .p 379 to 736 10 to 366   tiling clone,   357/366
(97 %)
6 diff
(98.4 %id)
BF514872   .p 798 to 1335 18 to 555   tiling clone, Submitted on the opposite strand 538/538
(100 %)
2 diff
(99.7 %id)
BX470551   .p 1107 to 1708 9 to 610   tiling clone,   602/610
(98 %)
6 diff
(99.1 %id)
AA603961   .q-u 1 to 158 187 to 30   tiling clone,   158/189
(83 %)
0 diff
(100 %id)
CR748039   .q-u 67 to 763 1 to 696 F2X F11L F53X tiling clone,   696/701
(99 %)
3 diff
(99.6 %id)
BF352542 head_neck .q-u 170 to 661 15 to 505 exact tiling clone,   491/505
(97 %)
6 diff
(98.9 %id)
BG984790 colon_normal .q-u 298 to 720 431 to 14 F2L L3F F4S S5K Q6P ...     418/435
(96 %)
0 diff
(100 %id)
BF353258 head_neck .q-u 684 to 1060 12 to 385   tiling clone,   374/392
(95 %)
8 diff
(98.0 %id)
BF353248 head_neck .q-u 688 to 832 144 to 1   tiling clone,   144/144
(100 %)
4 diff
(97.3 %id)
FN143383 breast carcinoma .q-u 803 to 888 1 to 84       84/84
(100 %)
5 diff
(94.1 %id)
BF763536 colon_est .r-u 1 to 289 78 to 366   tiling clone,   289/366
(78 %)
6 diff
(98.4 %id)
BF765763 colon_est .r-u 1 to 338 338 to 1     Submitted on the opposite strand 338/415
(81 %)
4 diff
(99.1 %id)
AA640764 alveolar rhabdomyosarcoma .r-u 275 to 725 1 to 450   tiling clone,   450/450
(100 %)
1 diff
(99.8 %id)
DB513929 testis .s-u 1 to 721 1 to 720 L5C S6L F7S T8L Q9R ... tiling clone, Submitted on the opposite strand 720/720
(100 %)
4 diff
(99.5 %id)
TI_154004178   .s-u 114 to 726 710 to 98       613/1100
(55 %)
0 diff
(100 %id)
CA433577 mixed .s-u 204 to 718 533 to 19   AAA   515/515
(100 %)
0 diff
(100 %id)
DA380722 thalamus .t-u 1 to 560 2 to 561 exact tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
BF997657 placenta_normal .u 1 to 351 384 to 30 L20G N21Q D22* tiling clone,   355/384
(92 %)
7 diff
(98.2 %id)
BM146140 leukopheresis .va-u 1 to 314 1 to 315 V30X K31I W32G tiling clone,   315/323
(97 %)
12 diff
(96.3 %id)
AV692966 hepatocellular carcinoma Gene CHD6, variant not shown         This clone was ignored    
AV688536 hepatocellular carcinoma Gene CHD6, variant not shown         This clone was ignored    
BU630685 cell lines, Chondrosarcoma Gene CHD6, variant not shown       AAA      
DB312143 thalamus Gene CHD6, variant not shown              
DA400791 thalamus Gene CHD6, variant not shown       capped      
BX497043 Liver Gene CHD6, variant not shown              
BX497044 Liver Gene CHD6, variant not shown       AAA      
AV725997 hypothalamus Gene CHD6, variant not shown         This clone was ignored    
AF525085   Gene CHD6, variant not shown         Suspected internal deletion, this clone was ignored    
BG199519   Gene CHD6, variant not shown         Submitted on the opposite strand    
CR749575 testis Gene CHD6, variant not shown       available from DKFZ, AAA This clone was ignored    
AW896726 nervous_normal Gene CHD6, variant not shown              
AW089284 brain, tumor, 5 pooled (see description) Gene CHD6, variant not shown              
DB095007 testis Gene CHD6, variant not shown       capped This clone was ignored    
DB341685 testis Gene CHD6, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o-u, .p, .q-u, .r-u, .s-u, .t-u, .u, .va-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI