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Gene CHAC1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
143 supporting clones for gene CHAC1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA321496   .c-u 916 to 1244 1 to 330       330/330
(100 %)
1 diff
(99.7 %id)
AA357110   .c-u 1047 to 1359 1 to 313       313/313
(100 %)
0 diff
(100 %id)
AW964098   .c-u 1048 to 1498 1 to 451   AAA   451/451
(100 %)
0 diff
(100 %id)
AW991379 breast_normal .a 557 to 920 368 to 8     Submitted on the opposite strand 361/370
(97 %)
0 diff
(100 %id)
AW991515 breast_normal .a 555 to 934 390 to 10     Submitted on the opposite strand 381/390
(97 %)
0 diff
(100 %id)
AY702027   .b 615 to 1204 1 to 590   tiling clone,   590/590
(100 %)
1 diff
(99.9 %id)
BC001683 Muscle, rhabdomyosarcoma .a 56 to 1552 10 to 1506   available from MGC, AAA   1497/1497
(100 %)
0 diff
(100 %id)
BC001847 Muscle, rhabdomyosarcoma .a 56 to 1552 1 to 1497   available from MGC, AAA   1497/1497
(100 %)
0 diff
(100 %id)
BC019625 Liver, adenocarcinoma .a 45 to 1552 1 to 1508   tiling clone, available from MGC, AAA   1508/1508
(100 %)
0 diff
(100 %id)
BQ311858 breast_normal .a 551 to 925 11 to 385       375/385
(97 %)
6 diff
(98.5 %id)
BQ325498 colon_ins .c-u 1146 to 1400 35 to 281       247/285
(86 %)
18 diff
(93.7 %id)
CN256695 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c-u 769 to 1345 1 to 577       577/577
(100 %)
5 diff
(99.2 %id)
CN256696 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 68 to 603 1 to 536       536/536
(100 %)
0 diff
(100 %id)
CN256697 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 65 to 683 1 to 618       618/618
(100 %)
2 diff
(99.7 %id)
CN256698 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c-u 1 to 759 8 to 766   tiling clone,   759/766
(99 %)
1 diff
(99.9 %id)
CN256699 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c-u 991 to 1495 9 to 514       506/514
(98 %)
1 diff
(99.9 %id)
CR591065 B cells (Ramos cell line) Cot 25-normalized .a 69 to 1518 1 to 1450       1450/1450
(100 %)
0 diff
(100 %id)
CR592413 Neuroblastoma Cot 50-normalized .a 58 to 1535 1 to 1478       1478/1478
(100 %)
0 diff
(100 %id)
CR597001 HeLa cells Cot 25-normalized .a 61 to 1524 1 to 1464       1464/1464
(100 %)
0 diff
(100 %id)
CR598230 Neuroblastoma Cot 25-normalized .a 56 to 1495 1 to 1440       1440/1440
(100 %)
0 diff
(100 %id)
CR598799 T cells (Jurkat cell line) Cot10-normalized .a 53 to 1529 1 to 1477       1477/1477
(100 %)
0 diff
(100 %id)
CR601069 Neuroblastoma Cot 25-normalized .a 56 to 1473 1 to 1418       1418/1418
(100 %)
0 diff
(100 %id)
CR604510 Neuroblastoma Cot 25-normalized .a 47 to 1525 1 to 1479       1479/1479
(100 %)
0 diff
(100 %id)
CR608003 Neuroblastoma Cot 25-normalized .a 61 to 1535 1 to 1475       1475/1475
(100 %)
0 diff
(100 %id)
CR617904 B cells (Ramos cell line) Cot 25-normalized .a 34 to 1539 1 to 1506       1506/1506
(100 %)
0 diff
(100 %id)
CR620504 HeLa cells Cot 25-normalized .a 45 to 1492 1 to 1448       1448/1448
(100 %)
0 diff
(100 %id)
CR624884 HeLa cells Cot 25-normalized .a 72 to 1550 1 to 1479       1479/1479
(100 %)
0 diff
(100 %id)
BX366092 Neuroblastoma Cot 25-normalized .a 49 to 895 1 to 843       843/843
(100 %)
8 diff
(99.1 %id)
BX387146 Neuroblastoma Cot 25-normalized .a 1399 to 2462 1058 to 1   tiling clone,   1058/1058
(100 %)
20 diff
(98.2 %id)
BX387147 Neuroblastoma Cot 25-normalized .a 49 to 1113 1 to 1054       1054/1054
(100 %)
15 diff
(98.6 %id)
BX393730 Neuroblastoma Cot 25-normalized .a 36 to 964 1 to 919       919/987
(93 %)
21 diff
(97.9 %id)
AL523425 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 780 to 1504 751 to 34   fully sequenced,   718/751
(95 %)
20 diff
(97.4 %id)
AL523426 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 61 to 810 1 to 741   fully sequenced,   741/741
(100 %)
2 diff
(99.8 %id)
AL524641 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 854 to 1495 633 to 1   fully sequenced,   633/633
(100 %)
15 diff
(97.7 %id)
AL524642 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 56 to 884 1 to 817   fully sequenced,   817/817
(100 %)
2 diff
(99.8 %id)
AL524709 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 806 to 1473 662 to 1   fully sequenced,   662/662
(100 %)
21 diff
(96.9 %id)
AL524710 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 56 to 836 1 to 762   fully sequenced,   762/762
(100 %)
0 diff
(100 %id)
AL525941 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 47 to 854 1 to 806   fully sequenced,   806/806
(100 %)
1 diff
(99.9 %id)
AL526154 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 824 to 1506 701 to 20   fully sequenced,   682/701
(97 %)
5 diff
(99.3 %id)
BX354515 Neuroblastoma Cot 25-normalized .a 535 to 1504 953 to 1   fully sequenced,   953/953
(100 %)
19 diff
(98.1 %id)
BX354516 Neuroblastoma Cot 25-normalized .a 59 to 565 1 to 510   fully sequenced,   510/510
(100 %)
25 diff
(95.1 %id)
AL528560 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 58 to 792 1 to 725   fully sequenced,   725/725
(100 %)
12 diff
(98.4 %id)
AL563188 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 762 to 1534 762 to 1   fully sequenced,   762/762
(100 %)
30 diff
(96.1 %id)
AL529164 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 49 to 784 1 to 736       736/736
(100 %)
0 diff
(100 %id)
AL530279 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 1414 to 2464 1050 to 6   tiling clone,   1045/1069
(97 %)
0 diff
(100 %id)
AL530280 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 46 to 1136 1 to 1077       1077/1080
(99 %)
16 diff
(98.6 %id)
BX421579 T cells (Jurkat cell line) .a 47 to 1151 1 to 1088       1088/1094
(99 %)
29 diff
(97.4 %id)
BX340878   .a 52 to 957 1 to 907       907/907
(100 %)
52 diff
(94.3 %id)
AL559612 T cells from T cell leukemia .a 59 to 981 1 to 925       925/982
(94 %)
31 diff
(96.9 %id)
AL581190 T cells from T cell leukemia .a 1125 to 1517 395 to 1       395/643
(61 %)
9 diff
(98.7 %id)
BX341273   .a 744 to 1529 787 to 1   fully sequenced,   787/787
(100 %)
14 diff
(98.3 %id)
BX341274   .a 53 to 774 1 to 722   fully sequenced,   722/722
(100 %)
0 diff
(100 %id)
BX341841   .a 1258 to 1504 265 to 20   fully sequenced,   677/696
(97 %)
14 diff
(98.0 %id)
BX341842   .a 61 to 820 1 to 747   fully sequenced,   747/747
(100 %)
4 diff
(99.5 %id)
AL555217 placenta .a 45 to 808 1 to 763   fully sequenced,   763/763
(100 %)
0 diff
(100 %id)
AL577767 placenta .a 778 to 1492 713 to 1   fully sequenced,   713/713
(100 %)
6 diff
(99.2 %id)
BX342065   .a 72 to 988 1 to 906   fully sequenced,   906/906
(100 %)
4 diff
(99.6 %id)
BX393254   .a 958 to 1549 602 to 1   fully sequenced,   602/602
(100 %)
29 diff
(95.2 %id)
BX363571   .a 677 to 1539 851 to 1   fully sequenced,   851/851
(100 %)
6 diff
(99.3 %id)
BX384820   .a 60 to 707 26 to 667   fully sequenced,   642/667
(96 %)
7 diff
(99.0 %id)
BX342645   .a 45 to 984 1 to 935       935/935
(100 %)
18 diff
(98.1 %id)
AL560697 B cells from Burkitt lymphoma .a 69 to 915 1 to 842   fully sequenced,   842/842
(100 %)
3 diff
(99.7 %id)
AL582108 B cells from Burkitt lymphoma .a 885 to 1518 616 to 1   fully sequenced,   616/616
(100 %)
12 diff
(98.1 %id)
CV026090 mixed .a 147 to 709 1 to 563       563/563
(100 %)
0 diff
(100 %id)
EH351731   .c-u 896 to 955 1 to 60       60/60
(100 %)
0 diff
(100 %id)
ES309947 scalp interfollicular dermis, skin .a 45 to 529 1 to 485       485/495
(97 %)
1 diff
(99.8 %id)
ES314464 occipital scalp hair, skin .b 547 to 728 1 to 180       180/180
(100 %)
2 diff
(98.9 %id)
ES315483 occipital scalp hair, skin .c-u 1350 to 1505 177 to 23   AAA Submitted on the opposite strand 155/155
(100 %)
1 diff
(99.4 %id)
DR978330 brain .c-u 856 to 972 116 to 1       116/140
(82 %)
2 diff
(98.6 %id)
R55677 whole brain .b 477 to 853 1 to 376       376/487
(77 %)
9 diff
(98.2 %id)
W19325 senescent fibroblast .a 1253 to 1563 325 to 1   fully sequenced,   325/325
(100 %)
11 diff
(96.7 %id)
W25488 senescent fibroblast .a 896 to 1283 1 to 393   fully sequenced,   393/393
(100 %)
17 diff
(95.7 %id)
AA535031 colon .c-u 1053 to 1501 449 to 1       449/449
(100 %)
7 diff
(98.5 %id)
AA894653 Kidney .c-u 1332 to 1498 166 to 1       166/166
(100 %)
1 diff
(99.4 %id)
AI279622 carcinoid, lung .c-u 1223 to 1498 288 to 13   AAA   276/276
(100 %)
1 diff
(99.7 %id)
AI433067 adenocarcinoma, Pancreas .c-u 1190 to 1498 309 to 1       309/309
(100 %)
0 diff
(100 %id)
AI459053 carcinoid, lung .c-u 1116 to 1498 396 to 14   AAA   383/383
(100 %)
1 diff
(99.8 %id)
AI638823 pooled germ cell tumors .c-u 1230 to 1499 277 to 8       270/277
(97 %)
0 diff
(100 %id)
AI628434 Kidney .c-u 1051 to 1498 447 to 1       447/447
(100 %)
2 diff
(99.6 %id)
AI671554 pooled germ cell tumors .c-u 1230 to 1499 277 to 8       270/277
(97 %)
0 diff
(100 %id)
AI655052 pooled germ cell tumors .c-u 1230 to 1499 277 to 8       270/277
(97 %)
0 diff
(100 %id)
AI911127 pooled .c-u 1073 to 1498 445 to 20   AAA   426/426
(100 %)
2 diff
(99.6 %id)
AI700697 carcinoid, lung .c-u 1126 to 1498 386 to 14   AAA   373/373
(100 %)
5 diff
(98.7 %id)
AW083365 colon, moderately differentiated adenocarcinoma .c-u 1090 to 1498 411 to 1       411/411
(100 %)
3 diff
(99.3 %id)
AW275368 Kidney .c-u 1086 to 1498 413 to 1       413/413
(100 %)
0 diff
(100 %id)
AW411028 muscle, rhabdomyosarcoma .a 56 to 618 10 to 572       563/572
(98 %)
6 diff
(99.0 %id)
AW411029 muscle, rhabdomyosarcoma .a 1097 to 1552 487 to 32   AAA   456/456
(100 %)
0 diff
(100 %id)
BE669506 carcinoid, lung .c-u 1076 to 1498 440 to 18   AAA   423/423
(100 %)
5 diff
(98.9 %id)
BF001389 colon, colon tumor, RER+ .c-u 1072 to 1499 431 to 4       428/431
(99 %)
0 diff
(100 %id)
BE544298 cervical carcinoma cell line, cervix .c-u 734 to 1446 1 to 706       706/821
(85 %)
11 diff
(98.7 %id)
BE544293 cervical carcinoma cell line, cervix .c-u 734 to 1498 1 to 753       753/785
(95 %)
33 diff
(95.8 %id)
BF307602 muscle, rhabdomyosarcoma .a 55 to 784 1 to 713       713/917
(77 %)
22 diff
(97.7 %id)
BF306790 muscle, rhabdomyosarcoma .c-u 679 to 1412 1 to 714       714/824
(86 %)
18 diff
(97.9 %id)
BF796767 lymph, lymphoma, cell line .a 38 to 818 1 to 766       766/960
(79 %)
29 diff
(97.0 %id)
BG177191 lymph, lymphoma, cell line .d 1 to 765 1 to 766 H5Q R6Q T7N L8P V9G ... tiling clone,   766/847
(90 %)
29 diff
(96.6 %id)
BG252187 adenocarcinoma, cell line, Liver .a 46 to 771 1 to 720       720/736
(97 %)
13 diff
(98.3 %id)
BG395253 eye, retinoblastoma .c-u 535 to 999 1 to 465       465/465
(100 %)
1 diff
(99.8 %id)
BG489543 large cell carcinoma, lung .a 211 to 920 1 to 709       709/709
(100 %)
12 diff
(98.4 %id)
BI193464 epithelioid carcinoma cell line, Pancreas .a 71 to 688 1 to 626       626/790
(79 %)
31 diff
(96.1 %id)
BI826016 brain, medulla .a 21 to 790 1 to 770       770/770
(100 %)
0 diff
(100 %id)
BI819368 pooled brain, lung, testis .a 45 to 819 1 to 776       776/776
(100 %)
9 diff
(98.9 %id)
BI761404 pooled colon, kidney, stomach .a 45 to 712 1 to 678       678/678
(100 %)
21 diff
(97.0 %id)
BI755067 brain .a 46 to 818 1 to 770       770/770
(100 %)
8 diff
(99.0 %id)
BI756086 brain .a 208 to 1035 1 to 828       828/828
(100 %)
1 diff
(99.9 %id)
BI756525 brain .a 25 to 823 1 to 806       806/810
(99 %)
16 diff
(98.1 %id)
BI753500 brain .a 46 to 552 1 to 507       507/507
(100 %)
1 diff
(99.9 %id)
BM043235 carcinoma, cell line, Prostate .a 564 to 1119 10 to 568       559/570
(98 %)
5 diff
(99.2 %id)
BM043783 carcinoma, cell line, Prostate .a 564 to 942 11 to 392       382/583
(65 %)
7 diff
(98.8 %id)
BM043806 carcinoma, cell line, Prostate .a 564 to 967 11 to 415       405/546
(74 %)
4 diff
(99.3 %id)
BM043884 carcinoma, cell line, Prostate .a 564 to 1159 11 to 605       595/605
(98 %)
6 diff
(99.1 %id)
BM048538 carcinoma, cell line, Prostate .a 564 to 1161 11 to 605       595/605
(98 %)
6 diff
(99.1 %id)
BM046215 carcinoma, cell line, Prostate .a 564 to 1114 11 to 561       551/561
(98 %)
6 diff
(99.0 %id)
BM012901 brain, neuroblastoma, cell line .a 46 to 817 1 to 770       770/770
(100 %)
14 diff
(98.2 %id)
BM456254 lymph, lymphoma, cell line .a 69 to 793 1 to 740       740/823
(89 %)
25 diff
(97.0 %id)
BM454177 lymph, lymphoma, cell line .a 73 to 683 1 to 613       613/1099
(55 %)
9 diff
(99.2 %id)
BM556362 duodenal adenocarcinoma, cell line, small intestine .a 68 to 920 13 to 885       873/996
(87 %)
35 diff
(96.5 %id)
BM925846 brain .a 79 to 1023 16 to 972       957/1003
(95 %)
40 diff
(96.1 %id)
BQ049395 lymph, lymphoma, cell line .c-u 987 to 1501 1 to 515   AAA   515/515
(100 %)
0 diff
(100 %id)
BM999571 Fibrosarcoma .c-u 768 to 1501 755 to 19   AAA   737/737
(100 %)
4 diff
(99.5 %id)
BQ421076 epithelioid carcinoma, Pancreas .a 457 to 1039 1 to 582       582/592
(98 %)
5 diff
(99.2 %id)
BQ221809 large cell carcinoma, lung .a 62 to 947 1 to 888       888/888
(100 %)
8 diff
(99.1 %id)
BQ229688 large cell carcinoma, lung .a 70 to 836 1 to 768       768/842
(91 %)
2 diff
(99.8 %id)
BQ215990 large cell carcinoma, lung .b 1 to 787 1 to 795   tiling clone,   795/887
(89 %)
23 diff
(97.5 %id)
BU838199 melanotic melanoma, cell line, skin .b 188 to 890 1 to 703   tiling clone,   703/882
(79 %)
3 diff
(99.7 %id)
BQ900544 brain, neuroblastoma, cell line .a 1 to 910 1 to 920 T263X E264R Q265A L269P V270G tiling clone,   920/950
(96 %)
16 diff
(98.4 %id)
BU502776 carcinoma, cell line, Prostate .c-u 505 to 1188 1 to 689 exact     689/947
(72 %)
12 diff
(98.8 %id)
BU552621 carcinoma, cell line, Prostate .c-u 505 to 1360 1 to 861 exact tiling clone,   861/904
(95 %)
16 diff
(98.3 %id)
CX762132 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 60 to 724 35 to 688     Submitted on the opposite strand 654/784
(83 %)
32 diff
(96.0 %id)
TI_57215982   .a 46 to 818 28 to 797       770/797
(96 %)
13 diff
(98.4 %id)
TI_57216375   .a 208 to 1035 35 to 862       828/862
(96 %)
7 diff
(99.2 %id)
TI_57216888   .a 25 to 823 31 to 836       806/840
(95 %)
19 diff
(97.8 %id)
TI_57218271   .a 46 to 552 32 to 538       507/538
(94 %)
6 diff
(98.9 %id)
TI_57197578   .a 45 to 819 32 to 807       776/807
(96 %)
11 diff
(98.7 %id)
TI_57147314   .a 45 to 712 71 to 748       678/748
(90 %)
22 diff
(97.1 %id)
TI_57173708   .a 21 to 790 29 to 798       770/798
(96 %)
6 diff
(99.3 %id)
TI_59382133   .a 47 to 817 121 to 889       769/769
(100 %)
13 diff
(98.4 %id)
CB118517 Liver .a 99 to 486 41 to 428       388/428
(90 %)
5 diff
(98.9 %id)
CB123885 Liver .a 99 to 443 41 to 385       345/385
(89 %)
5 diff
(98.8 %id)
NM_024111.3   .a 1 to 1560 1 to 1560 exact RefSeq, AAA   1560/1560
(100 %)
0 diff
(100 %id)
NM_001142776.1   .b 477 to 1901 1 to 1425 exact RefSeq, AAA   1425/1425
(100 %)
0 diff
(100 %id)
BM743219 stomach .c-u 1067 to 1402 1 to 337       337/337
(100 %)
2 diff
(99.5 %id)
BM741202 Ascites, stomach .c-u 863 to 1501 1 to 639       639/639
(100 %)
2 diff
(99.7 %id)
BM757102 Ascites, stomach .c-u 863 to 1221 1 to 359       359/359
(100 %)
1 diff
(99.8 %id)
BM757109 Ascites, stomach .a 300 to 633 1 to 334       334/334
(100 %)
2 diff
(99.5 %id)
BM784841 Ascites, stomach .c-u 621 to 979 1 to 359       359/359
(100 %)
2 diff
(99.5 %id)
BM766562 Ascites, stomach .c-u 1171 to 1498 1 to 328       328/328
(100 %)
2 diff
(99.4 %id)
BM770332 Ascites, stomach .c-u 621 to 1094 1 to 475       475/475
(100 %)
3 diff
(99.4 %id)
BM768609 stomach .c-u 1114 to 1503 1 to 390   tiling clone,   390/390
(100 %)
0 diff
(100 %id)
BM843362 stomach .a 34 to 613 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
BM850339 stomach .a 1168 to 1558 1 to 391       391/398
(98 %)
1 diff
(99.8 %id)
BM856289 stomach .c-u 1146 to 1277 1 to 132       132/132
(100 %)
1 diff
(99.3 %id)
BQ084298 stomach .b 510 to 810 1 to 301       301/301
(100 %)
1 diff
(99.7 %id)
DN994261 brain, whole brain .a 54 to 633 9 to 588       580/588
(98 %)
6 diff
(99.0 %id)
CA503402 Human Lung Epithelial cells, lung .c-u 886 to 1498 632 to 19   AAA   614/614
(100 %)
1 diff
(99.9 %id)
BM702585 eye, human retina .c-u 1203 to 1506 1 to 304   tiling clone, AAA   304/304
(100 %)
0 diff
(100 %id)
BQ447223 Knee, Osteoarthritic Cartilage .c-u 1039 to 1498 479 to 19   AAA   461/461
(100 %)
2 diff
(99.6 %id)
CB529304 Aveolar Macrophage, lung .c-u 782 to 1498 734 to 19   AAA   716/716
(100 %)
1 diff
(99.9 %id)
BX394112 Neuroblastoma Cot 25-normalized .a 564 to 942 11 to 392     Suspected internal deletion, this clone was ignored 382/583
(65 %)
7 diff
(98.8 %id)
BE677815 pooled .a 564 to 942 11 to 392     Suspected internal deletion, this clone was ignored 382/583
(65 %)
7 diff
(98.8 %id)
BM043806 carcinoma, cell line, Prostate .a 564 to 967 11 to 415       405/546
(74 %)
4 diff
(99.3 %id)
BM043806 carcinoma, cell line, Prostate .a 564 to 967 11 to 415       405/546
(74 %)
4 diff
(99.3 %id)
BM043884 carcinoma, cell line, Prostate .a 564 to 1159 11 to 605       595/605
(98 %)
6 diff
(99.1 %id)
BM043884 carcinoma, cell line, Prostate .a 564 to 1159 11 to 605       595/605
(98 %)
6 diff
(99.1 %id)
BM048538 carcinoma, cell line, Prostate .a 564 to 1161 11 to 605       595/605
(98 %)
6 diff
(99.1 %id)
BM048538 carcinoma, cell line, Prostate .a 564 to 1161 11 to 605       595/605
(98 %)
6 diff
(99.1 %id)
BM046215 carcinoma, cell line, Prostate .a 564 to 1114 11 to 561       551/561
(98 %)
6 diff
(99.0 %id)
BM046215 carcinoma, cell line, Prostate .a 564 to 1114 11 to 561       551/561
(98 %)
6 diff
(99.0 %id)
BM012901 brain, neuroblastoma, cell line .a 46 to 817 1 to 770       770/770
(100 %)
14 diff
(98.2 %id)
BM012901 brain, neuroblastoma, cell line .a 46 to 817 1 to 770       770/770
(100 %)
14 diff
(98.2 %id)
BM456254 lymph, lymphoma, cell line .a 69 to 793 1 to 740       740/823
(89 %)
25 diff
(97.0 %id)
BM456254 lymph, lymphoma, cell line .a 69 to 793 1 to 740       740/823
(89 %)
25 diff
(97.0 %id)
BM454177 lymph, lymphoma, cell line .a 73 to 683 1 to 613       613/1099
(55 %)
9 diff
(99.2 %id)
BM454177 lymph, lymphoma, cell line .a 73 to 683 1 to 613       613/1099
(55 %)
9 diff
(99.2 %id)
BM556362 duodenal adenocarcinoma, cell line, small intestine .a 68 to 920 13 to 885       873/996
(87 %)
35 diff
(96.5 %id)
BM556362 duodenal adenocarcinoma, cell line, small intestine .a 68 to 920 13 to 885       873/996
(87 %)
35 diff
(96.5 %id)
BM925846 brain .a 79 to 1023 16 to 972       957/1003
(95 %)
40 diff
(96.1 %id)
BQ049395 lymph, lymphoma, cell line .c-u 987 to 1501 1 to 515   AAA   515/515
(100 %)
0 diff
(100 %id)
BQ049395 lymph, lymphoma, cell line .c-u 987 to 1501 1 to 515   AAA   515/515
(100 %)
0 diff
(100 %id)
BM999571 Fibrosarcoma .c-u 768 to 1501 755 to 19   AAA   737/737
(100 %)
4 diff
(99.5 %id)
BQ421076 epithelioid carcinoma, Pancreas .a 457 to 1039 1 to 582       582/592
(98 %)
5 diff
(99.2 %id)
BQ421076 epithelioid carcinoma, Pancreas .a 457 to 1039 1 to 582       582/592
(98 %)
5 diff
(99.2 %id)
BQ221809 large cell carcinoma, lung .a 62 to 947 1 to 888       888/888
(100 %)
8 diff
(99.1 %id)
BQ221809 large cell carcinoma, lung .a 62 to 947 1 to 888       888/888
(100 %)
8 diff
(99.1 %id)
BQ229688 large cell carcinoma, lung .a 70 to 836 1 to 768       768/842
(91 %)
2 diff
(99.8 %id)
BQ229688 large cell carcinoma, lung .a 70 to 836 1 to 768       768/842
(91 %)
2 diff
(99.8 %id)
BQ215990 large cell carcinoma, lung .b 1 to 787 1 to 795   tiling clone,   795/887
(89 %)
23 diff
(97.5 %id)
BQ215990 large cell carcinoma, lung .b 1 to 787 1 to 795   tiling clone,   795/887
(89 %)
23 diff
(97.5 %id)
BU838199 melanotic melanoma, cell line, skin .b 188 to 890 1 to 703   tiling clone,   703/882
(79 %)
3 diff
(99.7 %id)
BU838199 melanotic melanoma, cell line, skin .b 188 to 890 1 to 703   tiling clone,   703/882
(79 %)
3 diff
(99.7 %id)
BQ900544 brain, neuroblastoma, cell line .a 1 to 910 1 to 920 T263X E264R Q265A L269P V270G tiling clone,   920/950
(96 %)
16 diff
(98.4 %id)
BQ900544 brain, neuroblastoma, cell line .a 1 to 910 1 to 920 T263X E264R Q265A L269P V270G tiling clone,   920/950
(96 %)
16 diff
(98.4 %id)
BU502776 carcinoma, cell line, Prostate .c-u 505 to 1188 1 to 689 exact     689/947
(72 %)
12 diff
(98.8 %id)
BU502776 carcinoma, cell line, Prostate .c-u 505 to 1188 1 to 689 exact     689/947
(72 %)
12 diff
(98.8 %id)
BU552621 carcinoma, cell line, Prostate .c-u 505 to 1360 1 to 861 exact tiling clone,   861/904
(95 %)
16 diff
(98.3 %id)
BU552621 carcinoma, cell line, Prostate .c-u 505 to 1360 1 to 861 exact tiling clone,   861/904
(95 %)
16 diff
(98.3 %id)
CX762132 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 60 to 724 35 to 688     Submitted on the opposite strand 654/784
(83 %)
32 diff
(96.0 %id)
CX762132 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 60 to 724 35 to 688     Submitted on the opposite strand 654/784
(83 %)
32 diff
(96.0 %id)
TI_57215982   .a 46 to 818 28 to 797       770/797
(96 %)
13 diff
(98.4 %id)
TI_57216375   .a 208 to 1035 35 to 862       828/862
(96 %)
7 diff
(99.2 %id)
TI_57216888   .a 25 to 823 31 to 836       806/840
(95 %)
19 diff
(97.8 %id)
TI_57218271   .a 46 to 552 32 to 538       507/538
(94 %)
6 diff
(98.9 %id)
TI_57197578   .a 45 to 819 32 to 807       776/807
(96 %)
11 diff
(98.7 %id)
TI_57147314   .a 45 to 712 71 to 748       678/748
(90 %)
22 diff
(97.1 %id)
TI_57173708   .a 21 to 790 29 to 798       770/798
(96 %)
6 diff
(99.3 %id)
TI_59382133   .a 47 to 817 121 to 889       769/769
(100 %)
13 diff
(98.4 %id)
CB118517 Liver .a 99 to 486 41 to 428       388/428
(90 %)
5 diff
(98.9 %id)
CB123885 Liver .a 99 to 443 41 to 385       345/385
(89 %)
5 diff
(98.8 %id)
NM_024111.3   .a 1 to 1560 1 to 1560 exact RefSeq, AAA   1560/1560
(100 %)
0 diff
(100 %id)
NM_001142776.1   .b 477 to 1901 1 to 1425 exact RefSeq, AAA   1425/1425
(100 %)
0 diff
(100 %id)
BM743219 stomach .c-u 1067 to 1402 1 to 337       337/337
(100 %)
2 diff
(99.5 %id)
BM741202 Ascites, stomach .c-u 863 to 1501 1 to 639       639/639
(100 %)
2 diff
(99.7 %id)
BM741202 Ascites, stomach .c-u 863 to 1501 1 to 639       639/639
(100 %)
2 diff
(99.7 %id)
BM757102 Ascites, stomach .c-u 863 to 1221 1 to 359       359/359
(100 %)
1 diff
(99.8 %id)
BM757102 Ascites, stomach .c-u 863 to 1221 1 to 359       359/359
(100 %)
1 diff
(99.8 %id)
BM757109 Ascites, stomach .a 300 to 633 1 to 334       334/334
(100 %)
2 diff
(99.5 %id)
BM757109 Ascites, stomach .a 300 to 633 1 to 334       334/334
(100 %)
2 diff
(99.5 %id)
BM784841 Ascites, stomach .c-u 621 to 979 1 to 359       359/359
(100 %)
2 diff
(99.5 %id)
BM784841 Ascites, stomach .c-u 621 to 979 1 to 359       359/359
(100 %)
2 diff
(99.5 %id)
BM766562 Ascites, stomach .c-u 1171 to 1498 1 to 328       328/328
(100 %)
2 diff
(99.4 %id)
BM766562 Ascites, stomach .c-u 1171 to 1498 1 to 328       328/328
(100 %)
2 diff
(99.4 %id)
BM770332 Ascites, stomach .c-u 621 to 1094 1 to 475       475/475
(100 %)
3 diff
(99.4 %id)
BM770332 Ascites, stomach .c-u 621 to 1094 1 to 475       475/475
(100 %)
3 diff
(99.4 %id)
BM768609 stomach .c-u 1114 to 1503 1 to 390   tiling clone,   390/390
(100 %)
0 diff
(100 %id)
BM843362 stomach .a 34 to 613 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
BM850339 stomach .a 1168 to 1558 1 to 391       391/398
(98 %)
1 diff
(99.8 %id)
BM856289 stomach .c-u 1146 to 1277 1 to 132       132/132
(100 %)
1 diff
(99.3 %id)
BQ084298 stomach .b 510 to 810 1 to 301       301/301
(100 %)
1 diff
(99.7 %id)
DN994261 brain, whole brain .a 54 to 633 9 to 588       580/588
(98 %)
6 diff
(99.0 %id)
DN994261 brain, whole brain .a 54 to 633 9 to 588       580/588
(98 %)
6 diff
(99.0 %id)
CA503402 Human Lung Epithelial cells, lung .c-u 886 to 1498 632 to 19   AAA   614/614
(100 %)
1 diff
(99.9 %id)
CA503402 Human Lung Epithelial cells, lung .c-u 886 to 1498 632 to 19   AAA   614/614
(100 %)
1 diff
(99.9 %id)
BM702585 eye, human retina .c-u 1203 to 1506 1 to 304   tiling clone, AAA   304/304
(100 %)
0 diff
(100 %id)
BM702585 eye, human retina .c-u 1203 to 1506 1 to 304   tiling clone, AAA   304/304
(100 %)
0 diff
(100 %id)
BQ447223 Knee, Osteoarthritic Cartilage .c-u 1039 to 1498 479 to 19   AAA   461/461
(100 %)
2 diff
(99.6 %id)
BQ447223 Knee, Osteoarthritic Cartilage .c-u 1039 to 1498 479 to 19   AAA   461/461
(100 %)
2 diff
(99.6 %id)
CB529304 Aveolar Macrophage, lung .c-u 782 to 1498 734 to 19   AAA   716/716
(100 %)
1 diff
(99.9 %id)
CB529304 Aveolar Macrophage, lung .c-u 782 to 1498 734 to 19   AAA   716/716
(100 %)
1 diff
(99.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI