cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AA321496 | .c-u | 916 to 1244 | 1 to 330 | 330/330 (100 %) | 1 diff (99.7 %id) | ||||
AA357110 | .c-u | 1047 to 1359 | 1 to 313 | 313/313 (100 %) | 0 diff (100 %id) | ||||
AW964098 | .c-u | 1048 to 1498 | 1 to 451 | AAA | 451/451 (100 %) | 0 diff (100 %id) | |||
AW991379 | breast_normal | .a | 557 to 920 | 368 to 8 | Submitted on the opposite strand | 361/370 (97 %) | 0 diff (100 %id) | ||
AW991515 | breast_normal | .a | 555 to 934 | 390 to 10 | Submitted on the opposite strand | 381/390 (97 %) | 0 diff (100 %id) | ||
AY702027 | .b | 615 to 1204 | 1 to 590 | tiling clone, | 590/590 (100 %) | 1 diff (99.9 %id) | |||
BC001683 | Muscle, rhabdomyosarcoma | .a | 56 to 1552 | 10 to 1506 | available from MGC, AAA | 1497/1497 (100 %) | 0 diff (100 %id) | ||
BC001847 | Muscle, rhabdomyosarcoma | .a | 56 to 1552 | 1 to 1497 | available from MGC, AAA | 1497/1497 (100 %) | 0 diff (100 %id) | ||
BC019625 | Liver, adenocarcinoma | .a | 45 to 1552 | 1 to 1508 | tiling clone, available from MGC, AAA | 1508/1508 (100 %) | 0 diff (100 %id) | ||
BQ311858 | breast_normal | .a | 551 to 925 | 11 to 385 | 375/385 (97 %) | 6 diff (98.5 %id) | |||
BQ325498 | colon_ins | .c-u | 1146 to 1400 | 35 to 281 | 247/285 (86 %) | 18 diff (93.7 %id) | |||
CN256695 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | .c-u | 769 to 1345 | 1 to 577 | 577/577 (100 %) | 5 diff (99.2 %id) | |||
CN256696 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | .a | 68 to 603 | 1 to 536 | 536/536 (100 %) | 0 diff (100 %id) | |||
CN256697 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .a | 65 to 683 | 1 to 618 | 618/618 (100 %) | 2 diff (99.7 %id) | |||
CN256698 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | .c-u | 1 to 759 | 8 to 766 | tiling clone, | 759/766 (99 %) | 1 diff (99.9 %id) | ||
CN256699 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | .c-u | 991 to 1495 | 9 to 514 | 506/514 (98 %) | 1 diff (99.9 %id) | |||
CR591065 | B cells (Ramos cell line) Cot 25-normalized | .a | 69 to 1518 | 1 to 1450 | 1450/1450 (100 %) | 0 diff (100 %id) | |||
CR592413 | Neuroblastoma Cot 50-normalized | .a | 58 to 1535 | 1 to 1478 | 1478/1478 (100 %) | 0 diff (100 %id) | |||
CR597001 | HeLa cells Cot 25-normalized | .a | 61 to 1524 | 1 to 1464 | 1464/1464 (100 %) | 0 diff (100 %id) | |||
CR598230 | Neuroblastoma Cot 25-normalized | .a | 56 to 1495 | 1 to 1440 | 1440/1440 (100 %) | 0 diff (100 %id) | |||
CR598799 | T cells (Jurkat cell line) Cot10-normalized | .a | 53 to 1529 | 1 to 1477 | 1477/1477 (100 %) | 0 diff (100 %id) | |||
CR601069 | Neuroblastoma Cot 25-normalized | .a | 56 to 1473 | 1 to 1418 | 1418/1418 (100 %) | 0 diff (100 %id) | |||
CR604510 | Neuroblastoma Cot 25-normalized | .a | 47 to 1525 | 1 to 1479 | 1479/1479 (100 %) | 0 diff (100 %id) | |||
CR608003 | Neuroblastoma Cot 25-normalized | .a | 61 to 1535 | 1 to 1475 | 1475/1475 (100 %) | 0 diff (100 %id) | |||
CR617904 | B cells (Ramos cell line) Cot 25-normalized | .a | 34 to 1539 | 1 to 1506 | 1506/1506 (100 %) | 0 diff (100 %id) | |||
CR620504 | HeLa cells Cot 25-normalized | .a | 45 to 1492 | 1 to 1448 | 1448/1448 (100 %) | 0 diff (100 %id) | |||
CR624884 | HeLa cells Cot 25-normalized | .a | 72 to 1550 | 1 to 1479 | 1479/1479 (100 %) | 0 diff (100 %id) | |||
BX366092 | Neuroblastoma Cot 25-normalized | .a | 49 to 895 | 1 to 843 | 843/843 (100 %) | 8 diff (99.1 %id) | |||
BX387146 | Neuroblastoma Cot 25-normalized | .a | 1399 to 2462 | 1058 to 1 | tiling clone, | 1058/1058 (100 %) | 20 diff (98.2 %id) | ||
BX387147 | Neuroblastoma Cot 25-normalized | .a | 49 to 1113 | 1 to 1054 | 1054/1054 (100 %) | 15 diff (98.6 %id) | |||
BX393730 | Neuroblastoma Cot 25-normalized | .a | 36 to 964 | 1 to 919 | 919/987 (93 %) | 21 diff (97.9 %id) | |||
AL523425 | brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized | .a | 780 to 1504 | 751 to 34 | fully sequenced, | 718/751 (95 %) | 20 diff (97.4 %id) | ||
AL523426 | brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized | .a | 61 to 810 | 1 to 741 | fully sequenced, | 741/741 (100 %) | 2 diff (99.8 %id) | ||
AL524641 | brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized | .a | 854 to 1495 | 633 to 1 | fully sequenced, | 633/633 (100 %) | 15 diff (97.7 %id) | ||
AL524642 | brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized | .a | 56 to 884 | 1 to 817 | fully sequenced, | 817/817 (100 %) | 2 diff (99.8 %id) | ||
AL524709 | brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized | .a | 806 to 1473 | 662 to 1 | fully sequenced, | 662/662 (100 %) | 21 diff (96.9 %id) | ||
AL524710 | brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized | .a | 56 to 836 | 1 to 762 | fully sequenced, | 762/762 (100 %) | 0 diff (100 %id) | ||
AL525941 | brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized | .a | 47 to 854 | 1 to 806 | fully sequenced, | 806/806 (100 %) | 1 diff (99.9 %id) | ||
AL526154 | brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized | .a | 824 to 1506 | 701 to 20 | fully sequenced, | 682/701 (97 %) | 5 diff (99.3 %id) | ||
BX354515 | Neuroblastoma Cot 25-normalized | .a | 535 to 1504 | 953 to 1 | fully sequenced, | 953/953 (100 %) | 19 diff (98.1 %id) | ||
BX354516 | Neuroblastoma Cot 25-normalized | .a | 59 to 565 | 1 to 510 | fully sequenced, | 510/510 (100 %) | 25 diff (95.1 %id) | ||
AL528560 | brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized | .a | 58 to 792 | 1 to 725 | fully sequenced, | 725/725 (100 %) | 12 diff (98.4 %id) | ||
AL563188 | brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized | .a | 762 to 1534 | 762 to 1 | fully sequenced, | 762/762 (100 %) | 30 diff (96.1 %id) | ||
AL529164 | brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized | .a | 49 to 784 | 1 to 736 | 736/736 (100 %) | 0 diff (100 %id) | |||
AL530279 | brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized | .a | 1414 to 2464 | 1050 to 6 | tiling clone, | 1045/1069 (97 %) | 0 diff (100 %id) | ||
AL530280 | brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized | .a | 46 to 1136 | 1 to 1077 | 1077/1080 (99 %) | 16 diff (98.6 %id) | |||
BX421579 | T cells (Jurkat cell line) | .a | 47 to 1151 | 1 to 1088 | 1088/1094 (99 %) | 29 diff (97.4 %id) | |||
BX340878 | .a | 52 to 957 | 1 to 907 | 907/907 (100 %) | 52 diff (94.3 %id) | ||||
AL559612 | T cells from T cell leukemia | .a | 59 to 981 | 1 to 925 | 925/982 (94 %) | 31 diff (96.9 %id) | |||
AL581190 | T cells from T cell leukemia | .a | 1125 to 1517 | 395 to 1 | 395/643 (61 %) | 9 diff (98.7 %id) | |||
BX341273 | .a | 744 to 1529 | 787 to 1 | fully sequenced, | 787/787 (100 %) | 14 diff (98.3 %id) | |||
BX341274 | .a | 53 to 774 | 1 to 722 | fully sequenced, | 722/722 (100 %) | 0 diff (100 %id) | |||
BX341841 | .a | 1258 to 1504 | 265 to 20 | fully sequenced, | 677/696 (97 %) | 14 diff (98.0 %id) | |||
BX341842 | .a | 61 to 820 | 1 to 747 | fully sequenced, | 747/747 (100 %) | 4 diff (99.5 %id) | |||
AL555217 | placenta | .a | 45 to 808 | 1 to 763 | fully sequenced, | 763/763 (100 %) | 0 diff (100 %id) | ||
AL577767 | placenta | .a | 778 to 1492 | 713 to 1 | fully sequenced, | 713/713 (100 %) | 6 diff (99.2 %id) | ||
BX342065 | .a | 72 to 988 | 1 to 906 | fully sequenced, | 906/906 (100 %) | 4 diff (99.6 %id) | |||
BX393254 | .a | 958 to 1549 | 602 to 1 | fully sequenced, | 602/602 (100 %) | 29 diff (95.2 %id) | |||
BX363571 | .a | 677 to 1539 | 851 to 1 | fully sequenced, | 851/851 (100 %) | 6 diff (99.3 %id) | |||
BX384820 | .a | 60 to 707 | 26 to 667 | fully sequenced, | 642/667 (96 %) | 7 diff (99.0 %id) | |||
BX342645 | .a | 45 to 984 | 1 to 935 | 935/935 (100 %) | 18 diff (98.1 %id) | ||||
AL560697 | B cells from Burkitt lymphoma | .a | 69 to 915 | 1 to 842 | fully sequenced, | 842/842 (100 %) | 3 diff (99.7 %id) | ||
AL582108 | B cells from Burkitt lymphoma | .a | 885 to 1518 | 616 to 1 | fully sequenced, | 616/616 (100 %) | 12 diff (98.1 %id) | ||
CV026090 | mixed | .a | 147 to 709 | 1 to 563 | 563/563 (100 %) | 0 diff (100 %id) | |||
EH351731 | .c-u | 896 to 955 | 1 to 60 | 60/60 (100 %) | 0 diff (100 %id) | ||||
ES309947 | scalp interfollicular dermis, skin | .a | 45 to 529 | 1 to 485 | 485/495 (97 %) | 1 diff (99.8 %id) | |||
ES314464 | occipital scalp hair, skin | .b | 547 to 728 | 1 to 180 | 180/180 (100 %) | 2 diff (98.9 %id) | |||
ES315483 | occipital scalp hair, skin | .c-u | 1350 to 1505 | 177 to 23 | AAA | Submitted on the opposite strand | 155/155 (100 %) | 1 diff (99.4 %id) | |
DR978330 | brain | .c-u | 856 to 972 | 116 to 1 | 116/140 (82 %) | 2 diff (98.6 %id) | |||
R55677 | whole brain | .b | 477 to 853 | 1 to 376 | 376/487 (77 %) | 9 diff (98.2 %id) | |||
W19325 | senescent fibroblast | .a | 1253 to 1563 | 325 to 1 | fully sequenced, | 325/325 (100 %) | 11 diff (96.7 %id) | ||
W25488 | senescent fibroblast | .a | 896 to 1283 | 1 to 393 | fully sequenced, | 393/393 (100 %) | 17 diff (95.7 %id) | ||
AA535031 | colon | .c-u | 1053 to 1501 | 449 to 1 | 449/449 (100 %) | 7 diff (98.5 %id) | |||
AA894653 | Kidney | .c-u | 1332 to 1498 | 166 to 1 | 166/166 (100 %) | 1 diff (99.4 %id) | |||
AI279622 | carcinoid, lung | .c-u | 1223 to 1498 | 288 to 13 | AAA | 276/276 (100 %) | 1 diff (99.7 %id) | ||
AI433067 | adenocarcinoma, Pancreas | .c-u | 1190 to 1498 | 309 to 1 | 309/309 (100 %) | 0 diff (100 %id) | |||
AI459053 | carcinoid, lung | .c-u | 1116 to 1498 | 396 to 14 | AAA | 383/383 (100 %) | 1 diff (99.8 %id) | ||
AI638823 | pooled germ cell tumors | .c-u | 1230 to 1499 | 277 to 8 | 270/277 (97 %) | 0 diff (100 %id) | |||
AI628434 | Kidney | .c-u | 1051 to 1498 | 447 to 1 | 447/447 (100 %) | 2 diff (99.6 %id) | |||
AI671554 | pooled germ cell tumors | .c-u | 1230 to 1499 | 277 to 8 | 270/277 (97 %) | 0 diff (100 %id) | |||
AI655052 | pooled germ cell tumors | .c-u | 1230 to 1499 | 277 to 8 | 270/277 (97 %) | 0 diff (100 %id) | |||
AI911127 | pooled | .c-u | 1073 to 1498 | 445 to 20 | AAA | 426/426 (100 %) | 2 diff (99.6 %id) | ||
AI700697 | carcinoid, lung | .c-u | 1126 to 1498 | 386 to 14 | AAA | 373/373 (100 %) | 5 diff (98.7 %id) | ||
AW083365 | colon, moderately differentiated adenocarcinoma | .c-u | 1090 to 1498 | 411 to 1 | 411/411 (100 %) | 3 diff (99.3 %id) | |||
AW275368 | Kidney | .c-u | 1086 to 1498 | 413 to 1 | 413/413 (100 %) | 0 diff (100 %id) | |||
AW411028 | muscle, rhabdomyosarcoma | .a | 56 to 618 | 10 to 572 | 563/572 (98 %) | 6 diff (99.0 %id) | |||
AW411029 | muscle, rhabdomyosarcoma | .a | 1097 to 1552 | 487 to 32 | AAA | 456/456 (100 %) | 0 diff (100 %id) | ||
BE669506 | carcinoid, lung | .c-u | 1076 to 1498 | 440 to 18 | AAA | 423/423 (100 %) | 5 diff (98.9 %id) | ||
BF001389 | colon, colon tumor, RER+ | .c-u | 1072 to 1499 | 431 to 4 | 428/431 (99 %) | 0 diff (100 %id) | |||
BE544298 | cervical carcinoma cell line, cervix | .c-u | 734 to 1446 | 1 to 706 | 706/821 (85 %) | 11 diff (98.7 %id) | |||
BE544293 | cervical carcinoma cell line, cervix | .c-u | 734 to 1498 | 1 to 753 | 753/785 (95 %) | 33 diff (95.8 %id) | |||
BF307602 | muscle, rhabdomyosarcoma | .a | 55 to 784 | 1 to 713 | 713/917 (77 %) | 22 diff (97.7 %id) | |||
BF306790 | muscle, rhabdomyosarcoma | .c-u | 679 to 1412 | 1 to 714 | 714/824 (86 %) | 18 diff (97.9 %id) | |||
BF796767 | lymph, lymphoma, cell line | .a | 38 to 818 | 1 to 766 | 766/960 (79 %) | 29 diff (97.0 %id) | |||
BG177191 | lymph, lymphoma, cell line | .d | 1 to 765 | 1 to 766 | H5Q R6Q T7N L8P V9G ... | tiling clone, | 766/847 (90 %) | 29 diff (96.6 %id) | |
BG252187 | adenocarcinoma, cell line, Liver | .a | 46 to 771 | 1 to 720 | 720/736 (97 %) | 13 diff (98.3 %id) | |||
BG395253 | eye, retinoblastoma | .c-u | 535 to 999 | 1 to 465 | 465/465 (100 %) | 1 diff (99.8 %id) | |||
BG489543 | large cell carcinoma, lung | .a | 211 to 920 | 1 to 709 | 709/709 (100 %) | 12 diff (98.4 %id) | |||
BI193464 | epithelioid carcinoma cell line, Pancreas | .a | 71 to 688 | 1 to 626 | 626/790 (79 %) | 31 diff (96.1 %id) | |||
BI826016 | brain, medulla | .a | 21 to 790 | 1 to 770 | 770/770 (100 %) | 0 diff (100 %id) | |||
BI819368 | pooled brain, lung, testis | .a | 45 to 819 | 1 to 776 | 776/776 (100 %) | 9 diff (98.9 %id) | |||
BI761404 | pooled colon, kidney, stomach | .a | 45 to 712 | 1 to 678 | 678/678 (100 %) | 21 diff (97.0 %id) | |||
BI755067 | brain | .a | 46 to 818 | 1 to 770 | 770/770 (100 %) | 8 diff (99.0 %id) | |||
BI756086 | brain | .a | 208 to 1035 | 1 to 828 | 828/828 (100 %) | 1 diff (99.9 %id) | |||
BI756525 | brain | .a | 25 to 823 | 1 to 806 | 806/810 (99 %) | 16 diff (98.1 %id) | |||
BI753500 | brain | .a | 46 to 552 | 1 to 507 | 507/507 (100 %) | 1 diff (99.9 %id) | |||
BM043235 | carcinoma, cell line, Prostate | .a | 564 to 1119 | 10 to 568 | 559/570 (98 %) | 5 diff (99.2 %id) | |||
BM043783 | carcinoma, cell line, Prostate | .a | 564 to 942 | 11 to 392 | 382/583 (65 %) | 7 diff (98.8 %id) | |||
BM043806 | carcinoma, cell line, Prostate | .a | 564 to 967 | 11 to 415 | 405/546 (74 %) | 4 diff (99.3 %id) | |||
BM043884 | carcinoma, cell line, Prostate | .a | 564 to 1159 | 11 to 605 | 595/605 (98 %) | 6 diff (99.1 %id) | |||
BM048538 | carcinoma, cell line, Prostate | .a | 564 to 1161 | 11 to 605 | 595/605 (98 %) | 6 diff (99.1 %id) | |||
BM046215 | carcinoma, cell line, Prostate | .a | 564 to 1114 | 11 to 561 | 551/561 (98 %) | 6 diff (99.0 %id) | |||
BM012901 | brain, neuroblastoma, cell line | .a | 46 to 817 | 1 to 770 | 770/770 (100 %) | 14 diff (98.2 %id) | |||
BM456254 | lymph, lymphoma, cell line | .a | 69 to 793 | 1 to 740 | 740/823 (89 %) | 25 diff (97.0 %id) | |||
BM454177 | lymph, lymphoma, cell line | .a | 73 to 683 | 1 to 613 | 613/1099 (55 %) | 9 diff (99.2 %id) | |||
BM556362 | duodenal adenocarcinoma, cell line, small intestine | .a | 68 to 920 | 13 to 885 | 873/996 (87 %) | 35 diff (96.5 %id) | |||
BM925846 | brain | .a | 79 to 1023 | 16 to 972 | 957/1003 (95 %) | 40 diff (96.1 %id) | |||
BQ049395 | lymph, lymphoma, cell line | .c-u | 987 to 1501 | 1 to 515 | AAA | 515/515 (100 %) | 0 diff (100 %id) | ||
BM999571 | Fibrosarcoma | .c-u | 768 to 1501 | 755 to 19 | AAA | 737/737 (100 %) | 4 diff (99.5 %id) | ||
BQ421076 | epithelioid carcinoma, Pancreas | .a | 457 to 1039 | 1 to 582 | 582/592 (98 %) | 5 diff (99.2 %id) | |||
BQ221809 | large cell carcinoma, lung | .a | 62 to 947 | 1 to 888 | 888/888 (100 %) | 8 diff (99.1 %id) | |||
BQ229688 | large cell carcinoma, lung | .a | 70 to 836 | 1 to 768 | 768/842 (91 %) | 2 diff (99.8 %id) | |||
BQ215990 | large cell carcinoma, lung | .b | 1 to 787 | 1 to 795 | tiling clone, | 795/887 (89 %) | 23 diff (97.5 %id) | ||
BU838199 | melanotic melanoma, cell line, skin | .b | 188 to 890 | 1 to 703 | tiling clone, | 703/882 (79 %) | 3 diff (99.7 %id) | ||
BQ900544 | brain, neuroblastoma, cell line | .a | 1 to 910 | 1 to 920 | T263X E264R Q265A L269P V270G | tiling clone, | 920/950 (96 %) | 16 diff (98.4 %id) | |
BU502776 | carcinoma, cell line, Prostate | .c-u | 505 to 1188 | 1 to 689 | exact | 689/947 (72 %) | 12 diff (98.8 %id) | ||
BU552621 | carcinoma, cell line, Prostate | .c-u | 505 to 1360 | 1 to 861 | exact | tiling clone, | 861/904 (95 %) | 16 diff (98.3 %id) | |
CX762132 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .a | 60 to 724 | 35 to 688 | Submitted on the opposite strand | 654/784 (83 %) | 32 diff (96.0 %id) | ||
TI_57215982 | .a | 46 to 818 | 28 to 797 | 770/797 (96 %) | 13 diff (98.4 %id) | ||||
TI_57216375 | .a | 208 to 1035 | 35 to 862 | 828/862 (96 %) | 7 diff (99.2 %id) | ||||
TI_57216888 | .a | 25 to 823 | 31 to 836 | 806/840 (95 %) | 19 diff (97.8 %id) | ||||
TI_57218271 | .a | 46 to 552 | 32 to 538 | 507/538 (94 %) | 6 diff (98.9 %id) | ||||
TI_57197578 | .a | 45 to 819 | 32 to 807 | 776/807 (96 %) | 11 diff (98.7 %id) | ||||
TI_57147314 | .a | 45 to 712 | 71 to 748 | 678/748 (90 %) | 22 diff (97.1 %id) | ||||
TI_57173708 | .a | 21 to 790 | 29 to 798 | 770/798 (96 %) | 6 diff (99.3 %id) | ||||
TI_59382133 | .a | 47 to 817 | 121 to 889 | 769/769 (100 %) | 13 diff (98.4 %id) | ||||
CB118517 | Liver | .a | 99 to 486 | 41 to 428 | 388/428 (90 %) | 5 diff (98.9 %id) | |||
CB123885 | Liver | .a | 99 to 443 | 41 to 385 | 345/385 (89 %) | 5 diff (98.8 %id) | |||
NM_024111.3 | .a | 1 to 1560 | 1 to 1560 | exact | RefSeq, AAA | 1560/1560 (100 %) | 0 diff (100 %id) | ||
NM_001142776.1 | .b | 477 to 1901 | 1 to 1425 | exact | RefSeq, AAA | 1425/1425 (100 %) | 0 diff (100 %id) | ||
BM743219 | stomach | .c-u | 1067 to 1402 | 1 to 337 | 337/337 (100 %) | 2 diff (99.5 %id) | |||
BM741202 | Ascites, stomach | .c-u | 863 to 1501 | 1 to 639 | 639/639 (100 %) | 2 diff (99.7 %id) | |||
BM757102 | Ascites, stomach | .c-u | 863 to 1221 | 1 to 359 | 359/359 (100 %) | 1 diff (99.8 %id) | |||
BM757109 | Ascites, stomach | .a | 300 to 633 | 1 to 334 | 334/334 (100 %) | 2 diff (99.5 %id) | |||
BM784841 | Ascites, stomach | .c-u | 621 to 979 | 1 to 359 | 359/359 (100 %) | 2 diff (99.5 %id) | |||
BM766562 | Ascites, stomach | .c-u | 1171 to 1498 | 1 to 328 | 328/328 (100 %) | 2 diff (99.4 %id) | |||
BM770332 | Ascites, stomach | .c-u | 621 to 1094 | 1 to 475 | 475/475 (100 %) | 3 diff (99.4 %id) | |||
BM768609 | stomach | .c-u | 1114 to 1503 | 1 to 390 | tiling clone, | 390/390 (100 %) | 0 diff (100 %id) | ||
BM843362 | stomach | .a | 34 to 613 | 1 to 581 | 581/581 (100 %) | 3 diff (99.5 %id) | |||
BM850339 | stomach | .a | 1168 to 1558 | 1 to 391 | 391/398 (98 %) | 1 diff (99.8 %id) | |||
BM856289 | stomach | .c-u | 1146 to 1277 | 1 to 132 | 132/132 (100 %) | 1 diff (99.3 %id) | |||
BQ084298 | stomach | .b | 510 to 810 | 1 to 301 | 301/301 (100 %) | 1 diff (99.7 %id) | |||
DN994261 | brain, whole brain | .a | 54 to 633 | 9 to 588 | 580/588 (98 %) | 6 diff (99.0 %id) | |||
CA503402 | Human Lung Epithelial cells, lung | .c-u | 886 to 1498 | 632 to 19 | AAA | 614/614 (100 %) | 1 diff (99.9 %id) | ||
BM702585 | eye, human retina | .c-u | 1203 to 1506 | 1 to 304 | tiling clone, AAA | 304/304 (100 %) | 0 diff (100 %id) | ||
BQ447223 | Knee, Osteoarthritic Cartilage | .c-u | 1039 to 1498 | 479 to 19 | AAA | 461/461 (100 %) | 2 diff (99.6 %id) | ||
CB529304 | Aveolar Macrophage, lung | .c-u | 782 to 1498 | 734 to 19 | AAA | 716/716 (100 %) | 1 diff (99.9 %id) | ||
BX394112 | Neuroblastoma Cot 25-normalized | .a | 564 to 942 | 11 to 392 | Suspected internal deletion, this clone was ignored | 382/583 (65 %) | 7 diff (98.8 %id) | ||
BE677815 | pooled | .a | 564 to 942 | 11 to 392 | Suspected internal deletion, this clone was ignored | 382/583 (65 %) | 7 diff (98.8 %id) | ||
BM043806 | carcinoma, cell line, Prostate | .a | 564 to 967 | 11 to 415 | 405/546 (74 %) | 4 diff (99.3 %id) | |||
BM043806 | carcinoma, cell line, Prostate | .a | 564 to 967 | 11 to 415 | 405/546 (74 %) | 4 diff (99.3 %id) | |||
BM043884 | carcinoma, cell line, Prostate | .a | 564 to 1159 | 11 to 605 | 595/605 (98 %) | 6 diff (99.1 %id) | |||
BM043884 | carcinoma, cell line, Prostate | .a | 564 to 1159 | 11 to 605 | 595/605 (98 %) | 6 diff (99.1 %id) | |||
BM048538 | carcinoma, cell line, Prostate | .a | 564 to 1161 | 11 to 605 | 595/605 (98 %) | 6 diff (99.1 %id) | |||
BM048538 | carcinoma, cell line, Prostate | .a | 564 to 1161 | 11 to 605 | 595/605 (98 %) | 6 diff (99.1 %id) | |||
BM046215 | carcinoma, cell line, Prostate | .a | 564 to 1114 | 11 to 561 | 551/561 (98 %) | 6 diff (99.0 %id) | |||
BM046215 | carcinoma, cell line, Prostate | .a | 564 to 1114 | 11 to 561 | 551/561 (98 %) | 6 diff (99.0 %id) | |||
BM012901 | brain, neuroblastoma, cell line | .a | 46 to 817 | 1 to 770 | 770/770 (100 %) | 14 diff (98.2 %id) | |||
BM012901 | brain, neuroblastoma, cell line | .a | 46 to 817 | 1 to 770 | 770/770 (100 %) | 14 diff (98.2 %id) | |||
BM456254 | lymph, lymphoma, cell line | .a | 69 to 793 | 1 to 740 | 740/823 (89 %) | 25 diff (97.0 %id) | |||
BM456254 | lymph, lymphoma, cell line | .a | 69 to 793 | 1 to 740 | 740/823 (89 %) | 25 diff (97.0 %id) | |||
BM454177 | lymph, lymphoma, cell line | .a | 73 to 683 | 1 to 613 | 613/1099 (55 %) | 9 diff (99.2 %id) | |||
BM454177 | lymph, lymphoma, cell line | .a | 73 to 683 | 1 to 613 | 613/1099 (55 %) | 9 diff (99.2 %id) | |||
BM556362 | duodenal adenocarcinoma, cell line, small intestine | .a | 68 to 920 | 13 to 885 | 873/996 (87 %) | 35 diff (96.5 %id) | |||
BM556362 | duodenal adenocarcinoma, cell line, small intestine | .a | 68 to 920 | 13 to 885 | 873/996 (87 %) | 35 diff (96.5 %id) | |||
BM925846 | brain | .a | 79 to 1023 | 16 to 972 | 957/1003 (95 %) | 40 diff (96.1 %id) | |||
BQ049395 | lymph, lymphoma, cell line | .c-u | 987 to 1501 | 1 to 515 | AAA | 515/515 (100 %) | 0 diff (100 %id) | ||
BQ049395 | lymph, lymphoma, cell line | .c-u | 987 to 1501 | 1 to 515 | AAA | 515/515 (100 %) | 0 diff (100 %id) | ||
BM999571 | Fibrosarcoma | .c-u | 768 to 1501 | 755 to 19 | AAA | 737/737 (100 %) | 4 diff (99.5 %id) | ||
BQ421076 | epithelioid carcinoma, Pancreas | .a | 457 to 1039 | 1 to 582 | 582/592 (98 %) | 5 diff (99.2 %id) | |||
BQ421076 | epithelioid carcinoma, Pancreas | .a | 457 to 1039 | 1 to 582 | 582/592 (98 %) | 5 diff (99.2 %id) | |||
BQ221809 | large cell carcinoma, lung | .a | 62 to 947 | 1 to 888 | 888/888 (100 %) | 8 diff (99.1 %id) | |||
BQ221809 | large cell carcinoma, lung | .a | 62 to 947 | 1 to 888 | 888/888 (100 %) | 8 diff (99.1 %id) | |||
BQ229688 | large cell carcinoma, lung | .a | 70 to 836 | 1 to 768 | 768/842 (91 %) | 2 diff (99.8 %id) | |||
BQ229688 | large cell carcinoma, lung | .a | 70 to 836 | 1 to 768 | 768/842 (91 %) | 2 diff (99.8 %id) | |||
BQ215990 | large cell carcinoma, lung | .b | 1 to 787 | 1 to 795 | tiling clone, | 795/887 (89 %) | 23 diff (97.5 %id) | ||
BQ215990 | large cell carcinoma, lung | .b | 1 to 787 | 1 to 795 | tiling clone, | 795/887 (89 %) | 23 diff (97.5 %id) | ||
BU838199 | melanotic melanoma, cell line, skin | .b | 188 to 890 | 1 to 703 | tiling clone, | 703/882 (79 %) | 3 diff (99.7 %id) | ||
BU838199 | melanotic melanoma, cell line, skin | .b | 188 to 890 | 1 to 703 | tiling clone, | 703/882 (79 %) | 3 diff (99.7 %id) | ||
BQ900544 | brain, neuroblastoma, cell line | .a | 1 to 910 | 1 to 920 | T263X E264R Q265A L269P V270G | tiling clone, | 920/950 (96 %) | 16 diff (98.4 %id) | |
BQ900544 | brain, neuroblastoma, cell line | .a | 1 to 910 | 1 to 920 | T263X E264R Q265A L269P V270G | tiling clone, | 920/950 (96 %) | 16 diff (98.4 %id) | |
BU502776 | carcinoma, cell line, Prostate | .c-u | 505 to 1188 | 1 to 689 | exact | 689/947 (72 %) | 12 diff (98.8 %id) | ||
BU502776 | carcinoma, cell line, Prostate | .c-u | 505 to 1188 | 1 to 689 | exact | 689/947 (72 %) | 12 diff (98.8 %id) | ||
BU552621 | carcinoma, cell line, Prostate | .c-u | 505 to 1360 | 1 to 861 | exact | tiling clone, | 861/904 (95 %) | 16 diff (98.3 %id) | |
BU552621 | carcinoma, cell line, Prostate | .c-u | 505 to 1360 | 1 to 861 | exact | tiling clone, | 861/904 (95 %) | 16 diff (98.3 %id) | |
CX762132 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .a | 60 to 724 | 35 to 688 | Submitted on the opposite strand | 654/784 (83 %) | 32 diff (96.0 %id) | ||
CX762132 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .a | 60 to 724 | 35 to 688 | Submitted on the opposite strand | 654/784 (83 %) | 32 diff (96.0 %id) | ||
TI_57215982 | .a | 46 to 818 | 28 to 797 | 770/797 (96 %) | 13 diff (98.4 %id) | ||||
TI_57216375 | .a | 208 to 1035 | 35 to 862 | 828/862 (96 %) | 7 diff (99.2 %id) | ||||
TI_57216888 | .a | 25 to 823 | 31 to 836 | 806/840 (95 %) | 19 diff (97.8 %id) | ||||
TI_57218271 | .a | 46 to 552 | 32 to 538 | 507/538 (94 %) | 6 diff (98.9 %id) | ||||
TI_57197578 | .a | 45 to 819 | 32 to 807 | 776/807 (96 %) | 11 diff (98.7 %id) | ||||
TI_57147314 | .a | 45 to 712 | 71 to 748 | 678/748 (90 %) | 22 diff (97.1 %id) | ||||
TI_57173708 | .a | 21 to 790 | 29 to 798 | 770/798 (96 %) | 6 diff (99.3 %id) | ||||
TI_59382133 | .a | 47 to 817 | 121 to 889 | 769/769 (100 %) | 13 diff (98.4 %id) | ||||
CB118517 | Liver | .a | 99 to 486 | 41 to 428 | 388/428 (90 %) | 5 diff (98.9 %id) | |||
CB123885 | Liver | .a | 99 to 443 | 41 to 385 | 345/385 (89 %) | 5 diff (98.8 %id) | |||
NM_024111.3 | .a | 1 to 1560 | 1 to 1560 | exact | RefSeq, AAA | 1560/1560 (100 %) | 0 diff (100 %id) | ||
NM_001142776.1 | .b | 477 to 1901 | 1 to 1425 | exact | RefSeq, AAA | 1425/1425 (100 %) | 0 diff (100 %id) | ||
BM743219 | stomach | .c-u | 1067 to 1402 | 1 to 337 | 337/337 (100 %) | 2 diff (99.5 %id) | |||
BM741202 | Ascites, stomach | .c-u | 863 to 1501 | 1 to 639 | 639/639 (100 %) | 2 diff (99.7 %id) | |||
BM741202 | Ascites, stomach | .c-u | 863 to 1501 | 1 to 639 | 639/639 (100 %) | 2 diff (99.7 %id) | |||
BM757102 | Ascites, stomach | .c-u | 863 to 1221 | 1 to 359 | 359/359 (100 %) | 1 diff (99.8 %id) | |||
BM757102 | Ascites, stomach | .c-u | 863 to 1221 | 1 to 359 | 359/359 (100 %) | 1 diff (99.8 %id) | |||
BM757109 | Ascites, stomach | .a | 300 to 633 | 1 to 334 | 334/334 (100 %) | 2 diff (99.5 %id) | |||
BM757109 | Ascites, stomach | .a | 300 to 633 | 1 to 334 | 334/334 (100 %) | 2 diff (99.5 %id) | |||
BM784841 | Ascites, stomach | .c-u | 621 to 979 | 1 to 359 | 359/359 (100 %) | 2 diff (99.5 %id) | |||
BM784841 | Ascites, stomach | .c-u | 621 to 979 | 1 to 359 | 359/359 (100 %) | 2 diff (99.5 %id) | |||
BM766562 | Ascites, stomach | .c-u | 1171 to 1498 | 1 to 328 | 328/328 (100 %) | 2 diff (99.4 %id) | |||
BM766562 | Ascites, stomach | .c-u | 1171 to 1498 | 1 to 328 | 328/328 (100 %) | 2 diff (99.4 %id) | |||
BM770332 | Ascites, stomach | .c-u | 621 to 1094 | 1 to 475 | 475/475 (100 %) | 3 diff (99.4 %id) | |||
BM770332 | Ascites, stomach | .c-u | 621 to 1094 | 1 to 475 | 475/475 (100 %) | 3 diff (99.4 %id) | |||
BM768609 | stomach | .c-u | 1114 to 1503 | 1 to 390 | tiling clone, | 390/390 (100 %) | 0 diff (100 %id) | ||
BM843362 | stomach | .a | 34 to 613 | 1 to 581 | 581/581 (100 %) | 3 diff (99.5 %id) | |||
BM850339 | stomach | .a | 1168 to 1558 | 1 to 391 | 391/398 (98 %) | 1 diff (99.8 %id) | |||
BM856289 | stomach | .c-u | 1146 to 1277 | 1 to 132 | 132/132 (100 %) | 1 diff (99.3 %id) | |||
BQ084298 | stomach | .b | 510 to 810 | 1 to 301 | 301/301 (100 %) | 1 diff (99.7 %id) | |||
DN994261 | brain, whole brain | .a | 54 to 633 | 9 to 588 | 580/588 (98 %) | 6 diff (99.0 %id) | |||
DN994261 | brain, whole brain | .a | 54 to 633 | 9 to 588 | 580/588 (98 %) | 6 diff (99.0 %id) | |||
CA503402 | Human Lung Epithelial cells, lung | .c-u | 886 to 1498 | 632 to 19 | AAA | 614/614 (100 %) | 1 diff (99.9 %id) | ||
CA503402 | Human Lung Epithelial cells, lung | .c-u | 886 to 1498 | 632 to 19 | AAA | 614/614 (100 %) | 1 diff (99.9 %id) | ||
BM702585 | eye, human retina | .c-u | 1203 to 1506 | 1 to 304 | tiling clone, AAA | 304/304 (100 %) | 0 diff (100 %id) | ||
BM702585 | eye, human retina | .c-u | 1203 to 1506 | 1 to 304 | tiling clone, AAA | 304/304 (100 %) | 0 diff (100 %id) | ||
BQ447223 | Knee, Osteoarthritic Cartilage | .c-u | 1039 to 1498 | 479 to 19 | AAA | 461/461 (100 %) | 2 diff (99.6 %id) | ||
BQ447223 | Knee, Osteoarthritic Cartilage | .c-u | 1039 to 1498 | 479 to 19 | AAA | 461/461 (100 %) | 2 diff (99.6 %id) | ||
CB529304 | Aveolar Macrophage, lung | .c-u | 782 to 1498 | 734 to 19 | AAA | 716/716 (100 %) | 1 diff (99.9 %id) | ||
CB529304 | Aveolar Macrophage, lung | .c-u | 782 to 1498 | 734 to 19 | AAA | 716/716 (100 %) | 1 diff (99.9 %id) |
? | Gene Summary | Gene on genome | mRNA:.a, .b, .c-u, .d | Alternative mRNAs features, proteins, introns, exons, sequences | Expression Tissue | Function, regulation, related genes CI |